Lcy13g007440 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g007440
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr13: 7018599 .. 7021249 (+)
RNA-Seq ExpressionLcy13g007440
SyntenyLcy13g007440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAATTACAAACCTTTGGCGGCCTGAAGGCGAGAGAGAGATAGAGGGAAATGAGCTCGCAGCTACTTCAGATTCCCTCTCTTCCTCCCATCGCCATTGCCAAAGCTCGCAATCAAACTCCATTAAAGCCAAGCTCCATTACAATTTCCTCATCTCCTCTTCCATTTCACACTCTCTCAGAAAGAACCCACATCCCCTCTCATGTCTACAGGCACCCAGCCGCCGTTCTTCTCGAGCTCTGCACTTCCATGAAAGAGCTCCACCAAATCCTCCCTCTGGTCATCAAAAATGGCCTCTACAACGAGCACTTGTTTCAAACCAAGCTCGTCAGCTTGTTCTCCAAGTATGGCAGCATCAACGAGGCCGCTCGGGTTTTCGAGCCGATTGAGGACAAGCTCGACGCTCTCTACCACACGATGCTAAAAGGGTATGCGAAGAATTCGTCGTTGGAGACTGCTCTTGCTTTTCTTTGTCGAATGAGGTACGATGATGTTAAGCCTGTTGTGTATAATTTTACTTATTTGTTGAAGGTTTGCGGCGATAATGCGGATTTGAAGAGGGGTAGGGAGATTCACGGGCAGCTGATTACGAATTCGTTTGGGGCGAATGTGTTTGCAATGACTGGCGTTGTGAATATGTATGCCAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTCGACAGAATGCCTGAGAGAGATTTGGTGTCTTGGAATACGATTGTAGCTGGGTTTTCTCAAAATGGGTTTGCAAAAAAGGCATTGGAGTTGGTTTTGAGGATGCAAGATGAAGGCCAAAGGCCTGATTCGATTACATTGGTTACTGTTTTGCCTGCTGCTGCTGATACTGGATCGTTAATGGTGGGGAAGTCTATTCATGGGTATGCCATTAGAGCTGGTTTTGCAAAACTTGTTAATATTTCAACTGCTTTAGTTGATATGTACTCAAAATGCGGTTCAGTGGAGACAGCTAGAATGATTTTTGATGGAATGGATCAGAAGACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTGCAAAGTGGTGAACCAGAGATGGCTATTGCAATTTTTGAGAAGATGTTGGAGGAAGGGATAGAGCCAACCAATGTAACAATTATGGAAGCATTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTAGTCGATCAGTTAAATCTTGGTTCTGACATCTCTGTTATGAACTCATTGATTTCTATGTATTCTAAGTGCAAGAAAGTTGACATTGCTTCTGATATTTTCAAGAGCTTACAGGGAAAAACAGTTGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAATTGTTTTTGTGAGATGCAATCTCTAGGTATAAAGCCTGATTCATTTACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCAGGCAAAATGGATTTATGGACTAGTCATTAGATCTTGTTTGGACAACAACGTTTTTGTGATGACTGCTCTTGTCGACATGTATGCAAAATGTGGAGCGGTTCATATGGCGAGAAAGCTTTTCGACATGATCGATGACCGGCATGTCATAACATGGAATGCGATGATAGATGGGTATGGGACACATGGACTCGGAAGAGCTGCAATAAATCTTTTTGACGAAATGCGAAAGGGAACTGTTGAGCCAAATGATATAACATTCTTATGTGTCATCTCTGCCTGCAGTCACTCAGGTTTGGTGGTTGAGGGACTCTACTATTTCAAGAGCATGAAACAGGACTATGGATTAGAGCCTTCGATGGATCACTACGGCGCCATGGTCGACCTACTCGGTCGAGCTGGCAGGATCAAGGAGGCCTGGGATTTTATCGAAAACATGCCCATTAGTCCAGGGATTACAGTATATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATGTTGAATTGGGAGAGAAAGCAGCCAACAAACTGTTTGAGTTGAACCCTGATGAGGGTGGCTACCATGTCTTGCTTGCAAATATTTATGCTTCTGCTTCAAAGTGGGGCAAAGTAGCTGAAGTAAGAAAAACAATGGAAAAGAAAGGGCTTCAGAAAACTCCTGGTTGCAGCTTGGTGGAACTGAGAAATGAGGTCCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGGATATATGCCTTTCTTGAGGAACTTGGGGATGAAATCAAGGCTGCTGGCTATGTGCCCGACACCAACTCGATCCATGACGTAGAAGACCATGTGCAGGAGCAGCTTCTCAATAGCCATAGCGAGAAGCTCGCCATTGCTTTCGGTCTTCTGAATACCAGTCCCGGTACAACGATACACATACGAAAGAACCTACGAGTGTGTGGAGATTGCCACAATGCAACCAAGTATATTTCACTTGTGACTGGAAGGGAGATCATAGTAAGGGATATGCATAGATTTCATCATTTCAAAAATGGTACTTGTTCTTGTGGAGATTATTGGTGAACTCTAGGCATACAGTTTTTCATCCCTGTTAGTTGTAACATCCACTATTGATAATGTGTAGCAAAAGATAGGCTGTATTTATACCAATAAAAGACTTGAGAATGATTCTTTTGTTTCTAC

mRNA sequence

AAGAATTACAAACCTTTGGCGGCCTGAAGGCGAGAGAGAGATAGAGGGAAATGAGCTCGCAGCTACTTCAGATTCCCTCTCTTCCTCCCATCGCCATTGCCAAAGCTCGCAATCAAACTCCATTAAAGCCAAGCTCCATTACAATTTCCTCATCTCCTCTTCCATTTCACACTCTCTCAGAAAGAACCCACATCCCCTCTCATGTCTACAGGCACCCAGCCGCCGTTCTTCTCGAGCTCTGCACTTCCATGAAAGAGCTCCACCAAATCCTCCCTCTGGTCATCAAAAATGGCCTCTACAACGAGCACTTGTTTCAAACCAAGCTCGTCAGCTTGTTCTCCAAGTATGGCAGCATCAACGAGGCCGCTCGGGTTTTCGAGCCGATTGAGGACAAGCTCGACGCTCTCTACCACACGATGCTAAAAGGGTTTGCGGCGATAATGCGGATTTGAAGAGGGGTAGGGAGATTCACGGGCAGCTGATTACGAATTCGTTTGGGGCGAATGTGTTTGCAATGACTGGCGTTGTGAATATGTATGCCAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTCGACAGAATGCCTGAGAGAGATTTGGTGTCTTGGAATACGATTGTAGCTGGGTTTTCTCAAAATGGGTTTGCAAAAAAGGCATTGGAGTTGGTTTTGAGGATGCAAGATGAAGGCCAAAGGCCTGATTCGATTACATTGGTTACTGTTTTGCCTGCTGCTGCTGATACTGGATCGTTAATGGTGGGGAAGTCTATTCATGGGTATGCCATTAGAGCTGGTTTTGCAAAACTTGTTAATATTTCAACTGCTTTAGTTGATATGTACTCAAAATGCGGTTCAGTGGAGACAGCTAGAATGATTTTTGATGGAATGGATCAGAAGACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTGCAAAGTGGTGAACCAGAGATGGCTATTGCAATTTTTGAGAAGATGTTGGAGGAAGGGATAGAGCCAACCAATGTAACAATTATGGAAGCATTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTAGTCGATCAGTTAAATCTTGGTTCTGACATCTCTGTTATGAACTCATTGATTTCTATGTATTCTAAGTGCAAGAAAGTTGACATTGCTTCTGATATTTTCAAGAGCTTACAGGGAAAAACAGTTGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAATTGTTTTTGTGAGATGCAATCTCTAGGTATAAAGCCTGATTCATTTACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCAGGCAAAATGGATTTATGGACTAGTCATTAGATCTTGTTTGGACAACAACGTTTTTGTGATGACTGCTCTTGTCGACATGTATGCAAAATGTGGAGCGGTTCATATGGCGAGAAAGCTTTTCGACATGATCGATGACCGGCATGTCATAACATGGAATGCGATGATAGATGGGTATGGGACACATGGACTCGGAAGAGCTGCAATAAATCTTTTTGACGAAATGCGAAAGGGAACTGTTGAGCCAAATGATATAACATTCTTATGTGTCATCTCTGCCTGCAGTCACTCAGGTTTGGTGGTTGAGGGACTCTACTATTTCAAGAGCATGAAACAGGACTATGGATTAGAGCCTTCGATGGATCACTACGGCGCCATGGTCGACCTACTCGGTCGAGCTGGCAGGATCAAGGAGGCCTGGGATTTTATCGAAAACATGCCCATTAGTCCAGGGATTACAGTATATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATGTTGAATTGGGAGAGAAAGCAGCCAACAAACTGTTTGAGTTGAACCCTGATGAGGGTGGCTACCATGTCTTGCTTGCAAATATTTATGCTTCTGCTTCAAAGTGGGGCAAAGTAGCTGAAGTAAGAAAAACAATGGAAAAGAAAGGGCTTCAGAAAACTCCTGGTTGCAGCTTGGTGGAACTGAGAAATGAGGTCCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGGATATATGCCTTTCTTGAGGAACTTGGGGATGAAATCAAGGCTGCTGGCTATGTGCCCGACACCAACTCGATCCATGACGTAGAAGACCATGTGCAGGAGCAGCTTCTCAATAGCCATAGCGAGAAGCTCGCCATTGCTTTCGGTCTTCTGAATACCAGTCCCGGTACAACGATACACATACGAAAGAACCTACGAGTGTGTGGAGATTGCCACAATGCAACCAAGTATATTTCACTTGTGACTGGAAGGGAGATCATAGTAAGGGATATGCATAGATTTCATCATTTCAAAAATGGTACTTGTTCTTGTGGAGATTATTGGTGAACTCTAGGCATACAGTTTTTCATCCCTGTTAGTTGTAACATCCACTATTGATAATGTGTAGCAAAAGATAGGCTGTATTTATACCAATAAAAGACTTGAGAATGATTCTTTTGTTTCTAC

Coding sequence (CDS)

ATGACTGGCGTTGTGAATATGTATGCCAAGTGCAGGCAGATTGATGATGCGTACAAGATGTTCGACAGAATGCCTGAGAGAGATTTGGTGTCTTGGAATACGATTGTAGCTGGGTTTTCTCAAAATGGGTTTGCAAAAAAGGCATTGGAGTTGGTTTTGAGGATGCAAGATGAAGGCCAAAGGCCTGATTCGATTACATTGGTTACTGTTTTGCCTGCTGCTGCTGATACTGGATCGTTAATGGTGGGGAAGTCTATTCATGGGTATGCCATTAGAGCTGGTTTTGCAAAACTTGTTAATATTTCAACTGCTTTAGTTGATATGTACTCAAAATGCGGTTCAGTGGAGACAGCTAGAATGATTTTTGATGGAATGGATCAGAAGACTGTTGTGTCATGGAATTCCATGATGGATGGATATGTGCAAAGTGGTGAACCAGAGATGGCTATTGCAATTTTTGAGAAGATGTTGGAGGAAGGGATAGAGCCAACCAATGTAACAATTATGGAAGCATTGCATGCCTGTGCTGATTTGGGTGATCTTGAGAGGGGGAAGTTTGTTCATAAGTTAGTCGATCAGTTAAATCTTGGTTCTGACATCTCTGTTATGAACTCATTGATTTCTATGTATTCTAAGTGCAAGAAAGTTGACATTGCTTCTGATATTTTCAAGAGCTTACAGGGAAAAACAGTTGTCTCATGGAATGCCATGATATTGGGTTATGCTCAGAATGGAAGAGTGAGTGAGGCTTTGAATTGTTTTTGTGAGATGCAATCTCTAGGTATAAAGCCTGATTCATTTACAATGGTAAGTGTGATACCTGCTCTTGCAGAATTATCAGTTACTCGCCAGGCAAAATGGATTTATGGACTAGTCATTAGATCTTGTTTGGACAACAACGTTTTTGTGATGACTGCTCTTGTCGACATGTATGCAAAATGTGGAGCGGTTCATATGGCGAGAAAGCTTTTCGACATGATCGATGACCGGCATGTCATAACATGGAATGCGATGATAGATGGGTATGGGACACATGGACTCGGAAGAGCTGCAATAAATCTTTTTGACGAAATGCGAAAGGGAACTGTTGAGCCAAATGATATAACATTCTTATGTGTCATCTCTGCCTGCAGTCACTCAGGTTTGGTGGTTGAGGGACTCTACTATTTCAAGAGCATGAAACAGGACTATGGATTAGAGCCTTCGATGGATCACTACGGCGCCATGGTCGACCTACTCGGTCGAGCTGGCAGGATCAAGGAGGCCTGGGATTTTATCGAAAACATGCCCATTAGTCCAGGGATTACAGTATATGGTGCCATGTTGGGTGCTTGTAAAATTCACAAAAATGTTGAATTGGGAGAGAAAGCAGCCAACAAACTGTTTGAGTTGAACCCTGATGAGGGTGGCTACCATGTCTTGCTTGCAAATATTTATGCTTCTGCTTCAAAGTGGGGCAAAGTAGCTGAAGTAAGAAAAACAATGGAAAAGAAAGGGCTTCAGAAAACTCCTGGTTGCAGCTTGGTGGAACTGAGAAATGAGGTCCATTCCTTCTATTCAGGGAGCACAACTCATCCACAATCCAAGAGGATATATGCCTTTCTTGAGGAACTTGGGGATGAAATCAAGGCTGCTGGCTATGTGCCCGACACCAACTCGATCCATGACGTAGAAGACCATGTGCAGGAGCAGCTTCTCAATAGCCATAGCGAGAAGCTCGCCATTGCTTTCGGTCTTCTGAATACCAGTCCCGGTACAACGATACACATACGAAAGAACCTACGAGTGTGTGGAGATTGCCACAATGCAACCAAGTATATTTCACTTGTGACTGGAAGGGAGATCATAGTAAGGGATATGCATAGATTTCATCATTTCAAAAATGGTACTTGTTCTTGTGGAGATTATTGGTGA

Protein sequence

MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARMIFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGDLERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILGYAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNNVFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRKGTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYASASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGDEIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Homology
BLAST of Lcy13g007440 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 1.6e-274
Identity = 443/637 (69.54%), Postives = 539/637 (84.62%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTG+ NMYAKCRQ+++A K+FDRMPERDLVSWNTIVAG+SQNG A+ ALE+V  M +E  
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 232

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           +P  IT+V+VLPA +    + VGK IHGYA+R+GF  LVNISTALVDMY+KCGS+ETAR 
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           +FDGM ++ VVSWNSM+D YVQ+  P+ A+ IF+KML+EG++PT+V++M ALHACADLGD
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LERG+F+HKL  +L L  ++SV+NSLISMY KCK+VD A+ +F  LQ +T+VSWNAMILG
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           +AQNGR  +ALN F +M+S  +KPD+FT VSVI A+AELS+T  AKWI+G+V+RSCLD N
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           VFV TALVDMYAKCGA+ +AR +FDM+ +RHV TWNAMIDGYGTHG G+AA+ LF+EM+K
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GT++PN +TFL VISACSHSGLV  GL  F  MK++Y +E SMDHYGAMVDLLGRAGR+ 
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI  MP+ P + VYGAMLGAC+IHKNV   EKAA +LFELNPD+GGYHVLLANIY 
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           +AS W KV +VR +M ++GL+KTPGCS+VE++NEVHSF+SGST HP SK+IYAFLE+L  
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 712

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
            IK AGYVPDTN +  VE+ V+EQLL++HSEKLAI+FGLLNT+ GTTIH+RKNLRVC DC
Sbjct: 713 HIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADC 772

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREI+VRDM RFHHFKNG CSCGDYW
Sbjct: 773 HNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lcy13g007440 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 569.7 bits (1467), Expect = 4.1e-161
Identity = 291/649 (44.84%), Postives = 413/649 (63.64%), Query Frame = 0

Query: 4   VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQRPD 63
           +V MY K  ++  +  +      RDLV+WNT+++   QN    +ALE +  M  EG  PD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 64  SITLVTVLPAAADTGSLMVGKSIHGYAIRAG-FAKLVNISTALVDMYSKCGSVETARMIF 123
             T+ +VLPA +    L  GK +H YA++ G   +   + +ALVDMY  C  V + R +F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361

Query: 124 DGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEE-GIEPTNVTIMEALHACADLGDL 183
           DGM  + +  WN+M+ GY Q+   + A+ +F  M E  G+   + T+   + AC   G  
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421

Query: 184 ERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILGY 243
            R + +H  V +  L  D  V N+L+ MYS+  K+DIA  IF  ++ + +V+WN MI GY
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481

Query: 244 AQNGRVSEALNCFCEMQSL-----------GIKPDSFTMVSVIPALAELSVTRQAKWIYG 303
             +    +AL    +MQ+L            +KP+S T+++++P+ A LS   + K I+ 
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541

Query: 304 LVIRSCLDNNVFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRA 363
             I++ L  +V V +ALVDMYAKCG + M+RK+FD I  ++VITWN +I  YG HG G+ 
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 601

Query: 364 AINLFDEMRKGTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMV 423
           AI+L   M    V+PN++TF+ V +ACSHSG+V EGL  F  MK DYG+EPS DHY  +V
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661

Query: 424 DLLGRAGRIKEAWDFIENMPIS-PGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEG 483
           DLLGRAGRIKEA+  +  MP        + ++LGA +IH N+E+GE AA  L +L P+  
Sbjct: 662 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 721

Query: 484 GYHVLLANIYASASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSK 543
            ++VLLANIY+SA  W K  EVR+ M+++G++K PGCS +E  +EVH F +G ++HPQS+
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 781

Query: 544 RIYAFLEELGDEIKAAGYVPDTNSI-HDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTI 603
           ++  +LE L + ++  GYVPDT+ + H+VE+  +E LL  HSEKLAIAFG+LNTSPGT I
Sbjct: 782 KLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 841

Query: 604 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
            + KNLRVC DCH ATK+IS +  REII+RD+ RFH FKNGTCSCGDYW
Sbjct: 842 RVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

BLAST of Lcy13g007440 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 1.5e-158
Identity = 270/638 (42.32%), Postives = 406/638 (63.64%), Query Frame = 0

Query: 2   TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEG-Q 61
           + +V MY K  +++DA K+FDRMPE+D + WNT+++G+ +N    +++++   + +E   
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 62  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 121
           R D+ TL+ +LPA A+   L +G  IH  A + G      + T  + +YSKCG ++    
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 122 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 181
           +F    +  +V++N+M+ GY  +GE E+++++F++++  G    + T++  +      G 
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GH 337

Query: 182 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 241
           L     +H    + N  S  SV  +L ++YSK  +++ A  +F     K++ SWNAMI G
Sbjct: 338 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 397

Query: 242 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 301
           Y QNG   +A++ F EMQ     P+  T+  ++ A A+L      KW++ LV  +  +++
Sbjct: 398 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 457

Query: 302 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 361
           ++V TAL+ MYAKCG++  AR+LFD++  ++ +TWN MI GYG HG G+ A+N+F EM  
Sbjct: 458 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 517

Query: 362 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 421
             + P  +TFLCV+ ACSH+GLV EG   F SM   YG EPS+ HY  MVD+LGRAG ++
Sbjct: 518 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 577

Query: 422 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 481
            A  FIE M I PG +V+  +LGAC+IHK+  L    + KLFEL+PD  GYHVLL+NI++
Sbjct: 578 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 637

Query: 482 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 541
           +   + + A VR+T +K+ L K PG +L+E+    H F SG  +HPQ K IY  LE+L  
Sbjct: 638 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 697

Query: 542 EIKAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGD 601
           +++ AGY P+T  ++HDVE+  +E ++  HSE+LAIAFGL+ T PGT I I KNLRVC D
Sbjct: 698 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 757

Query: 602 CHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           CH  TK IS +T R I+VRD +RFHHFK+G CSCGDYW
Sbjct: 758 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of Lcy13g007440 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 2.5e-158
Identity = 266/636 (41.82%), Postives = 418/636 (65.72%), Query Frame = 0

Query: 4   VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQRPD 63
           +V  Y K +++D A K+FD M ERD++SWN+I+ G+  NG A+K L + ++M   G   D
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295

Query: 64  SITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARMIFD 123
             T+V+V    AD+  + +G+++H   ++A F++       L+DMYSKCG +++A+ +F 
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355

Query: 124 GMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGDLER 183
            M  ++VVS+ SM+ GY + G    A+ +FE+M EEGI P   T+   L+ CA    L+ 
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415

Query: 184 GKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILGYAQ 243
           GK VH+ + + +LG DI V N+L+ MY+KC  +  A  +F  ++ K ++SWN +I GY++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475

Query: 244 NGRVSEALNCF-CEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNNVF 303
           N   +EAL+ F   ++     PD  T+  V+PA A LS   + + I+G ++R+   ++  
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535

Query: 304 VMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRKGT 363
           V  +LVDMYAKCGA+ +A  LFD I  + +++W  MI GYG HG G+ AI LF++MR+  
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595

Query: 364 VEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 423
           +E ++I+F+ ++ ACSHSGLV EG  +F  M+ +  +EP+++HY  +VD+L R G + +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655

Query: 424 WDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYASA 483
           + FIENMPI P  T++GA+L  C+IH +V+L EK A K+FEL P+  GY+VL+ANIYA A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715

Query: 484 SKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGDEI 543
            KW +V  +RK + ++GL+K PGCS +E++  V+ F +G +++P+++ I AFL ++   +
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775

Query: 544 KAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDCH 603
              GY P T  ++ D E+  +E+ L  HSEKLA+A G++++  G  I + KNLRVCGDCH
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 835

Query: 604 NATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
              K++S +T REI++RD +RFH FK+G CSC  +W
Sbjct: 836 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of Lcy13g007440 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 2.0e-155
Identity = 267/640 (41.72%), Postives = 412/640 (64.38%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           +T +++  +    I  A ++FD +P   +  WN I+ G+S+N   + AL +   MQ    
Sbjct: 56  ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
            PDS T   +L A +    L +G+ +H    R GF   V +   L+ +Y+KC  + +AR 
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175

Query: 121 IFDG--MDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADL 180
           +F+G  + ++T+VSW +++  Y Q+GEP  A+ IF +M +  ++P  V ++  L+A   L
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235

Query: 181 GDLERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMI 240
            DL++G+ +H  V ++ L  +  ++ SL +MY+KC +V  A  +F  ++   ++ WNAMI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295

Query: 241 LGYAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLD 300
            GYA+NG   EA++ F EM +  ++PD+ ++ S I A A++    QA+ +Y  V RS   
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355

Query: 301 NNVFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEM 360
           ++VF+ +AL+DM+AKCG+V  AR +FD   DR V+ W+AMI GYG HG  R AI+L+  M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415

Query: 361 RKGTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 420
            +G V PND+TFL ++ AC+HSG+V EG ++F  M  D+ + P   HY  ++DLLGRAG 
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGH 475

Query: 421 IKEAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANI 480
           + +A++ I+ MP+ PG+TV+GA+L ACK H++VELGE AA +LF ++P   G++V L+N+
Sbjct: 476 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 535

Query: 481 YASASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 540
           YA+A  W +VAEVR  M++KGL K  GCS VE+R  + +F  G  +HP+ + I   +E +
Sbjct: 536 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 595

Query: 541 GDEIKAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVC 600
              +K  G+V + + S+HD+ D   E+ L SHSE++AIA+GL++T  GT + I KNLR C
Sbjct: 596 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 655

Query: 601 GDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
            +CH ATK IS +  REI+VRD +RFHHFK+G CSCGDYW
Sbjct: 656 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

BLAST of Lcy13g007440 vs. ExPASy TrEMBL
Match: A0A6J1G036 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449497 PE=3 SV=1)

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 611/637 (95.92%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTI+ GFSQNGFA KALELVL MQDEGQ
Sbjct: 190 MTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEGQ 249

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGF+KLVNISTALVDMYSKCGSV+TAR+
Sbjct: 250 RPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTARL 309

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM+QKTVVSWNSMM GYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD
Sbjct: 310 IFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 369

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
            E GKFVHK VD+LNLGSD+S+MNSLISMYSKC +VDIASDIF +L  KT+VSWNAMILG
Sbjct: 370 FEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFMNLHRKTLVSWNAMILG 429

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           Y QNGRVSEALNCFCEMQSLGIK DSFTMVSVIPALAELSVTRQAKWI+GLVIRSC D N
Sbjct: 430 YTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLVIRSCFDKN 489

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAA+NLFDEMR+
Sbjct: 490 IFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMRR 549

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL YF+SMKQDYGLEPSMDHYGAMVDLLGRAGRIK
Sbjct: 550 GTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRIK 609

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI NMP+SPGITVYGAMLGACKIHKNVE GEK+ANKLFE+NPDEGGYHVLLANIYA
Sbjct: 610 EAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIYA 669

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVR+TMEKKGL+KTPGCS VE+RNEVHSFYSGSTTHPQSKRIYAFLEELGD
Sbjct: 670 SASKWGKVAEVRRTMEKKGLKKTPGCSFVEIRNEVHSFYSGSTTHPQSKRIYAFLEELGD 729

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDT+SIHDVED VQEQLLNSHSEKLAIAF LLNTSP TTIH+RKNLRVCGDC
Sbjct: 730 EIKAAGYVPDTSSIHDVEDAVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGDC 789

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 790 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of Lcy13g007440 vs. ExPASy TrEMBL
Match: A0A6J1CD18 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010091 PE=3 SV=1)

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 615/637 (96.55%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQI+DAYKMFDRMPERDLVSWNTI+AG+SQNGFA++ALELVLRMQDEG+
Sbjct: 191 MTGVVNMYAKCRQIEDAYKMFDRMPERDLVSWNTIIAGYSQNGFARRALELVLRMQDEGR 250

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKC SV+TAR+
Sbjct: 251 RPDSITLVTVLPAAADLGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCASVDTARL 310

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFD MDQKTVVSWNSMMDGYVQSGEPEMA+AIFEKMLEEGIEPTNV++M+ALHACADLGD
Sbjct: 311 IFDAMDQKTVVSWNSMMDGYVQSGEPEMAMAIFEKMLEEGIEPTNVSVMQALHACADLGD 370

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LE GK VH LVDQL LGSDISVMNSLISMYSKCK+VD+AS+IFK+L GKT VSWNAMILG
Sbjct: 371 LESGKSVHNLVDQLKLGSDISVMNSLISMYSKCKRVDVASEIFKNLHGKTHVSWNAMILG 430

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           YAQNGRVSEALNCFCEMQSLG+KPDSFTMVSVIPALAELSVTRQAKWI+GLVIR+C D N
Sbjct: 431 YAQNGRVSEALNCFCEMQSLGMKPDSFTMVSVIPALAELSVTRQAKWIHGLVIRTCFDKN 490

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FVMTALVDMYAKCGAVHMARKLF+MIDDRHVITWN MI GYGTHGLGRAA +LFDEM+K
Sbjct: 491 IFVMTALVDMYAKCGAVHMARKLFNMIDDRHVITWNVMIYGYGTHGLGRAATDLFDEMQK 550

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL+YFKSM+QDYGLEPSMDHYGAMVDLLGRAGRI 
Sbjct: 551 GTVEPNDITFLCVISACSHSGLVDEGLHYFKSMEQDYGLEPSMDHYGAMVDLLGRAGRIN 610

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFIENMP+SPGITVYGAMLGACKIHKNVELGEKAAN+LFEL PDEGGYHVLLANIYA
Sbjct: 611 EAWDFIENMPVSPGITVYGAMLGACKIHKNVELGEKAANRLFELKPDEGGYHVLLANIYA 670

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKW KVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGST+HPQSKRIYAFLEELGD
Sbjct: 671 SASKWSKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTSHPQSKRIYAFLEELGD 730

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EI+AAGYVPDTN IHDVED VQEQLLNSHSEKLAIAFGLLNT  GTTIHIRKNLRVCGDC
Sbjct: 731 EIRAAGYVPDTNLIHDVEDDVQEQLLNSHSEKLAIAFGLLNTRHGTTIHIRKNLRVCGDC 790

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 791 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 827

BLAST of Lcy13g007440 vs. ExPASy TrEMBL
Match: A0A6J1CEW2 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010091 PE=3 SV=1)

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 615/637 (96.55%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQI+DAYKMFDRMPERDLVSWNTI+AG+SQNGFA++ALELVLRMQDEG+
Sbjct: 93  MTGVVNMYAKCRQIEDAYKMFDRMPERDLVSWNTIIAGYSQNGFARRALELVLRMQDEGR 152

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKC SV+TAR+
Sbjct: 153 RPDSITLVTVLPAAADLGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCASVDTARL 212

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFD MDQKTVVSWNSMMDGYVQSGEPEMA+AIFEKMLEEGIEPTNV++M+ALHACADLGD
Sbjct: 213 IFDAMDQKTVVSWNSMMDGYVQSGEPEMAMAIFEKMLEEGIEPTNVSVMQALHACADLGD 272

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LE GK VH LVDQL LGSDISVMNSLISMYSKCK+VD+AS+IFK+L GKT VSWNAMILG
Sbjct: 273 LESGKSVHNLVDQLKLGSDISVMNSLISMYSKCKRVDVASEIFKNLHGKTHVSWNAMILG 332

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           YAQNGRVSEALNCFCEMQSLG+KPDSFTMVSVIPALAELSVTRQAKWI+GLVIR+C D N
Sbjct: 333 YAQNGRVSEALNCFCEMQSLGMKPDSFTMVSVIPALAELSVTRQAKWIHGLVIRTCFDKN 392

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FVMTALVDMYAKCGAVHMARKLF+MIDDRHVITWN MI GYGTHGLGRAA +LFDEM+K
Sbjct: 393 IFVMTALVDMYAKCGAVHMARKLFNMIDDRHVITWNVMIYGYGTHGLGRAATDLFDEMQK 452

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL+YFKSM+QDYGLEPSMDHYGAMVDLLGRAGRI 
Sbjct: 453 GTVEPNDITFLCVISACSHSGLVDEGLHYFKSMEQDYGLEPSMDHYGAMVDLLGRAGRIN 512

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFIENMP+SPGITVYGAMLGACKIHKNVELGEKAAN+LFEL PDEGGYHVLLANIYA
Sbjct: 513 EAWDFIENMPVSPGITVYGAMLGACKIHKNVELGEKAANRLFELKPDEGGYHVLLANIYA 572

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKW KVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGST+HPQSKRIYAFLEELGD
Sbjct: 573 SASKWSKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTSHPQSKRIYAFLEELGD 632

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EI+AAGYVPDTN IHDVED VQEQLLNSHSEKLAIAFGLLNT  GTTIHIRKNLRVCGDC
Sbjct: 633 EIRAAGYVPDTNLIHDVEDDVQEQLLNSHSEKLAIAFGLLNTRHGTTIHIRKNLRVCGDC 692

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 693 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 729

BLAST of Lcy13g007440 vs. ExPASy TrEMBL
Match: A0A6J1HPL9 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466556 PE=3 SV=1)

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 609/637 (95.60%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQI DA+KMFDRMP RDLVSWNTI+ GFSQNGFA KALELVL MQDEGQ
Sbjct: 190 MTGVVNMYAKCRQIHDAHKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEGQ 249

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGF+KLVNISTALVDMYSKCGSV+TAR+
Sbjct: 250 RPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTARL 309

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM+QKTVVSWNSMM GYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD
Sbjct: 310 IFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 369

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
            E GKFVHK VD+LNLGSDIS+MNSLISMYSKC +VDIASDIFK+L  KT+VSWNAMILG
Sbjct: 370 FEMGKFVHKFVDKLNLGSDISIMNSLISMYSKCNRVDIASDIFKNLHRKTLVSWNAMILG 429

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           Y QNGRVSEALNCFCEMQSLGIK DSFTMVSVIPALAELSVTRQAKWI+GL+IRSCLD N
Sbjct: 430 YTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLIIRSCLDKN 489

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGRA  NLFDEMR+
Sbjct: 490 IFVATALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAVANLFDEMRR 549

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL YF+SMKQDYGLEPSMDHYGAMVDLLGRAGRIK
Sbjct: 550 GTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRIK 609

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI NMP+SPGITVYGAMLGACKIHKNVE GEK+ANKLFE+NPDEGGYHVLLANIYA
Sbjct: 610 EAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIYA 669

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVR+TMEKKGL+KTPGCS VELRNEVHSFYSGSTTHPQSKRIYAFLE LGD
Sbjct: 670 SASKWGKVAEVRRTMEKKGLKKTPGCSFVELRNEVHSFYSGSTTHPQSKRIYAFLEVLGD 729

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDTNSIHDVED VQEQLLNSHSEKLAIAF LLNTSP TTIH+RKNLRVCGDC
Sbjct: 730 EIKAAGYVPDTNSIHDVEDDVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGDC 789

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 790 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of Lcy13g007440 vs. ExPASy TrEMBL
Match: A0A5D3CX30 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003120 PE=3 SV=1)

HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 587/637 (92.15%), Postives = 613/637 (96.23%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTI+AGFSQNGFAKKALELVLRMQDEGQ
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGFAKLVNISTAL DMYSKCGSVETAR+
Sbjct: 245 RPDSITLVTVLPAAADVGSLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGMDQKTVVSWNSMMDGYVQ+GEPE AIA+FEKMLEEGI+PT+VTIMEALHACADLGD
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTSVTIMEALHACADLGD 364

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LERGKFVHK VDQLNLGSDISVMNSLISMYSKCK+ DIASDIF +L G+T VSWNAMILG
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRADIASDIFNNLNGRTHVSWNAMILG 424

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           YAQNGRVSEALNCF EM+SLG+KPDSFTMVSVI ALA+LS+TR AKWI+GLVIRSCLD N
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVILALADLSITRHAKWIHGLVIRSCLDKN 484

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMI+DRHVITWNAMIDGYGTHGLGRAA++LFD+M+K
Sbjct: 485 IFVTTALVDMYAKCGAIHMARKLFDMINDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 544

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDIT+L VISACSHSGLV EGL++FKSMKQDYGLEPSMDHYG MVDLLGRAGRIK
Sbjct: 545 GTVEPNDITYLSVISACSHSGLVDEGLHHFKSMKQDYGLEPSMDHYGTMVDLLGRAGRIK 604

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFIENMPISPGITVYGAMLGACKIHKNVE GEKAANKLFELNPDEGGYHVLLANIYA
Sbjct: 605 EAWDFIENMPISPGITVYGAMLGACKIHKNVEFGEKAANKLFELNPDEGGYHVLLANIYA 664

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           S SKW KVAEVRKTMEKKGL+KTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELG 
Sbjct: 665 STSKWSKVAEVRKTMEKKGLKKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGY 724

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDTNSI DVED VQEQLLNSHSEKLAIAFGLLNTSPGTTIH+RKNLRVCGDC
Sbjct: 725 EIKAAGYVPDTNSILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDC 784

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 785 HNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821

BLAST of Lcy13g007440 vs. NCBI nr
Match: XP_038891367.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Benincasa hispida])

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 587/637 (92.15%), Postives = 615/637 (96.55%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAY MFDRMPERDLVSWNTI+AGFSQNGFAKKALELVLRMQDEG+
Sbjct: 191 MTGVVNMYAKCRQIDDAYNMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGR 250

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETAR+
Sbjct: 251 RPDSITLVTVLPAAADVGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARL 310

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM QKT+V+WNSMMDGYVQSG+ EMAI +FEKMLEEGIEPTNVTIME LHACADLGD
Sbjct: 311 IFDGMHQKTIVTWNSMMDGYVQSGQSEMAIVVFEKMLEEGIEPTNVTIMEVLHACADLGD 370

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LERGKFVHK VDQLNLGSDISVMNSLISMYSKCK+VDIASDIF +L G+T VSWNAMILG
Sbjct: 371 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTRVSWNAMILG 430

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           YAQNG+VSEALNCF EMQSLG+KPDSFTMVSV+PALAELS+TRQAKWI+GLVIR CLD N
Sbjct: 431 YAQNGKVSEALNCFFEMQSLGMKPDSFTMVSVLPALAELSITRQAKWIHGLVIRYCLDKN 490

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV T LVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGR A++LFD+M+K
Sbjct: 491 IFVTTTLVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRVALDLFDKMQK 550

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GT+EPNDITFL VISACSHSGLV EGL YFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK
Sbjct: 551 GTIEPNDITFLSVISACSHSGLVDEGLRYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 610

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI+NMPISPGITVYGAMLGACKIHKNVELGEK ANKLFELNPDEGGYHVLLANIYA
Sbjct: 611 EAWDFIKNMPISPGITVYGAMLGACKIHKNVELGEKVANKLFELNPDEGGYHVLLANIYA 670

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVRKTMEKKGL+KTPGCSLVEL+NE+HSFYSGSTTHPQSKRIYAFLE+LGD
Sbjct: 671 SASKWGKVAEVRKTMEKKGLKKTPGCSLVELKNEIHSFYSGSTTHPQSKRIYAFLEKLGD 730

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDTNSIHDVED VQEQLLNSHSEKLAIAFGLLNTSPGTTIH+RKNLRVCGDC
Sbjct: 731 EIKAAGYVPDTNSIHDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDC 790

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDM RFHHFKNGTCSCGDYW
Sbjct: 791 HNATKYISLVTGREIIVRDMQRFHHFKNGTCSCGDYW 827

BLAST of Lcy13g007440 vs. NCBI nr
Match: XP_023541274.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 613/637 (96.23%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTI+ GFSQNGFA KALELVL MQDEGQ
Sbjct: 190 MTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEGQ 249

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGF+KLVNISTALVDMYSKCGSV+TAR+
Sbjct: 250 RPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTARL 309

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM+QKTVVSWNSMM GYVQSGEPEMAIAIFEKML+EGIEPTNVTIMEALHACADLGD
Sbjct: 310 IFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLDEGIEPTNVTIMEALHACADLGD 369

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
            E GKFVHK VD+LNLGSD+S+MNSLISMYSKC +VDIASDIFK+L  KT+VSWNAMILG
Sbjct: 370 FEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFKNLHRKTLVSWNAMILG 429

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           Y QNGRVSEALNCFCEMQSLGIK DSFT+VSVIPALAELSVTRQAKWI+GLVIRSCLD N
Sbjct: 430 YTQNGRVSEALNCFCEMQSLGIKSDSFTVVSVIPALAELSVTRQAKWIHGLVIRSCLDKN 489

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAA+NLFDEMR+
Sbjct: 490 IFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMRR 549

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL YF+SMKQDYGLEPSMDHYG MVDLLGRAGRIK
Sbjct: 550 GTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGVMVDLLGRAGRIK 609

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFIENMP+SPGITVYGAMLGACKIHKNVE GEK+ANKLFE+NPDEGGYHVLLANIYA
Sbjct: 610 EAWDFIENMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIYA 669

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVR+TMEKKGL+KTPGCS VELRNEVHSFYSGSTTHPQSKRIYAFLEELGD
Sbjct: 670 SASKWGKVAEVRRTMEKKGLKKTPGCSFVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 729

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDT+SIHDVED VQEQLLNSHSEKLAIAF LLNTSP TTIH+RKNLRVCGDC
Sbjct: 730 EIKAAGYVPDTSSIHDVEDDVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGDC 789

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNG+CSCGDYW
Sbjct: 790 HNATKYISLVTGREIIVRDMHRFHHFKNGSCSCGDYW 826

BLAST of Lcy13g007440 vs. NCBI nr
Match: KAG6573778.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012852.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 588/637 (92.31%), Postives = 612/637 (96.08%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTI+ GFSQNGFA KALELVL MQDE Q
Sbjct: 190 MTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDERQ 249

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGF+KLVNISTALVDMYSKCGSV+TAR+
Sbjct: 250 RPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTARL 309

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM+QKTVVSWNSMM GYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD
Sbjct: 310 IFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 369

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
            E GKFVHK VD+LNLGSD+S+MNSLISMYSKC +VDIASDIFK+L  KT+VSWNAMILG
Sbjct: 370 FEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFKNLHRKTLVSWNAMILG 429

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           Y QNGRVSEALNCFCEMQSLGIK DSFTMVSVIPALAELSVTRQAKWI+GLVIRSCLD N
Sbjct: 430 YTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLVIRSCLDKN 489

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAA+NLFDEMR+
Sbjct: 490 IFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMRR 549

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL YF+SMKQDYGLEPSMDHYGAMVDLLGRAGRIK
Sbjct: 550 GTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRIK 609

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI NMP+SPGITVYGAMLGACKIHKNVE GEK+ANKLFE+NPDEGGYHVLLANIYA
Sbjct: 610 EAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIYA 669

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVR+TMEKKGL+KTPGCS VELRNEVHSFYSGSTTHPQSKRIYAFLEELGD
Sbjct: 670 SASKWGKVAEVRRTMEKKGLKKTPGCSFVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 729

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDT+SIHDVED VQEQLLNSHSEKLAIAF LLNTSP TTIH+RKNLRVCGDC
Sbjct: 730 EIKAAGYVPDTSSIHDVEDAVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGDC 789

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 790 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of Lcy13g007440 vs. NCBI nr
Match: XP_022945178.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 611/637 (95.92%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQIDDAYKMFDRMP RDLVSWNTI+ GFSQNGFA KALELVL MQDEGQ
Sbjct: 190 MTGVVNMYAKCRQIDDAYKMFDRMPVRDLVSWNTIITGFSQNGFANKALELVLSMQDEGQ 249

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGF+KLVNISTALVDMYSKCGSV+TAR+
Sbjct: 250 RPDSITLVTVLPAAADIGSLMVGKSIHGYAIRAGFSKLVNISTALVDMYSKCGSVDTARL 309

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFDGM+QKTVVSWNSMM GYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD
Sbjct: 310 IFDGMEQKTVVSWNSMMAGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 369

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
            E GKFVHK VD+LNLGSD+S+MNSLISMYSKC +VDIASDIF +L  KT+VSWNAMILG
Sbjct: 370 FEMGKFVHKFVDKLNLGSDVSIMNSLISMYSKCNRVDIASDIFMNLHRKTLVSWNAMILG 429

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           Y QNGRVSEALNCFCEMQSLGIK DSFTMVSVIPALAELSVTRQAKWI+GLVIRSC D N
Sbjct: 430 YTQNGRVSEALNCFCEMQSLGIKSDSFTMVSVIPALAELSVTRQAKWIHGLVIRSCFDKN 489

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FV TALVDMYAKCGA+HMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAA+NLFDEMR+
Sbjct: 490 IFVTTALVDMYAKCGAIHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAVNLFDEMRR 549

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL YF+SMKQDYGLEPSMDHYGAMVDLLGRAGRIK
Sbjct: 550 GTVEPNDITFLCVISACSHSGLVDEGLRYFESMKQDYGLEPSMDHYGAMVDLLGRAGRIK 609

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI NMP+SPGITVYGAMLGACKIHKNVE GEK+ANKLFE+NPDEGGYHVLLANIYA
Sbjct: 610 EAWDFIGNMPVSPGITVYGAMLGACKIHKNVEFGEKSANKLFEMNPDEGGYHVLLANIYA 669

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKWGKVAEVR+TMEKKGL+KTPGCS VE+RNEVHSFYSGSTTHPQSKRIYAFLEELGD
Sbjct: 670 SASKWGKVAEVRRTMEKKGLKKTPGCSFVEIRNEVHSFYSGSTTHPQSKRIYAFLEELGD 729

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EIKAAGYVPDT+SIHDVED VQEQLLNSHSEKLAIAF LLNTSP TTIH+RKNLRVCGDC
Sbjct: 730 EIKAAGYVPDTSSIHDVEDAVQEQLLNSHSEKLAIAFSLLNTSPNTTIHVRKNLRVCGDC 789

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 790 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 826

BLAST of Lcy13g007440 vs. NCBI nr
Match: XP_022139093.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 586/637 (91.99%), Postives = 615/637 (96.55%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTGVVNMYAKCRQI+DAYKMFDRMPERDLVSWNTI+AG+SQNGFA++ALELVLRMQDEG+
Sbjct: 93  MTGVVNMYAKCRQIEDAYKMFDRMPERDLVSWNTIIAGYSQNGFARRALELVLRMQDEGR 152

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           RPDSITLVTVLPAAAD GSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKC SV+TAR+
Sbjct: 153 RPDSITLVTVLPAAADLGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCASVDTARL 212

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           IFD MDQKTVVSWNSMMDGYVQSGEPEMA+AIFEKMLEEGIEPTNV++M+ALHACADLGD
Sbjct: 213 IFDAMDQKTVVSWNSMMDGYVQSGEPEMAMAIFEKMLEEGIEPTNVSVMQALHACADLGD 272

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LE GK VH LVDQL LGSDISVMNSLISMYSKCK+VD+AS+IFK+L GKT VSWNAMILG
Sbjct: 273 LESGKSVHNLVDQLKLGSDISVMNSLISMYSKCKRVDVASEIFKNLHGKTHVSWNAMILG 332

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           YAQNGRVSEALNCFCEMQSLG+KPDSFTMVSVIPALAELSVTRQAKWI+GLVIR+C D N
Sbjct: 333 YAQNGRVSEALNCFCEMQSLGMKPDSFTMVSVIPALAELSVTRQAKWIHGLVIRTCFDKN 392

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           +FVMTALVDMYAKCGAVHMARKLF+MIDDRHVITWN MI GYGTHGLGRAA +LFDEM+K
Sbjct: 393 IFVMTALVDMYAKCGAVHMARKLFNMIDDRHVITWNVMIYGYGTHGLGRAATDLFDEMQK 452

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GTVEPNDITFLCVISACSHSGLV EGL+YFKSM+QDYGLEPSMDHYGAMVDLLGRAGRI 
Sbjct: 453 GTVEPNDITFLCVISACSHSGLVDEGLHYFKSMEQDYGLEPSMDHYGAMVDLLGRAGRIN 512

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFIENMP+SPGITVYGAMLGACKIHKNVELGEKAAN+LFEL PDEGGYHVLLANIYA
Sbjct: 513 EAWDFIENMPVSPGITVYGAMLGACKIHKNVELGEKAANRLFELKPDEGGYHVLLANIYA 572

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           SASKW KVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGST+HPQSKRIYAFLEELGD
Sbjct: 573 SASKWSKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTSHPQSKRIYAFLEELGD 632

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
           EI+AAGYVPDTN IHDVED VQEQLLNSHSEKLAIAFGLLNT  GTTIHIRKNLRVCGDC
Sbjct: 633 EIRAAGYVPDTNLIHDVEDDVQEQLLNSHSEKLAIAFGLLNTRHGTTIHIRKNLRVCGDC 692

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW
Sbjct: 693 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 729

BLAST of Lcy13g007440 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 946.4 bits (2445), Expect = 1.2e-275
Identity = 443/637 (69.54%), Postives = 539/637 (84.62%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           MTG+ NMYAKCRQ+++A K+FDRMPERDLVSWNTIVAG+SQNG A+ ALE+V  M +E  
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 232

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
           +P  IT+V+VLPA +    + VGK IHGYA+R+GF  LVNISTALVDMY+KCGS+ETAR 
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292

Query: 121 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 180
           +FDGM ++ VVSWNSM+D YVQ+  P+ A+ IF+KML+EG++PT+V++M ALHACADLGD
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 181 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 240
           LERG+F+HKL  +L L  ++SV+NSLISMY KCK+VD A+ +F  LQ +T+VSWNAMILG
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 241 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 300
           +AQNGR  +ALN F +M+S  +KPD+FT VSVI A+AELS+T  AKWI+G+V+RSCLD N
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472

Query: 301 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 360
           VFV TALVDMYAKCGA+ +AR +FDM+ +RHV TWNAMIDGYGTHG G+AA+ LF+EM+K
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532

Query: 361 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 420
           GT++PN +TFL VISACSHSGLV  GL  F  MK++Y +E SMDHYGAMVDLLGRAGR+ 
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592

Query: 421 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 480
           EAWDFI  MP+ P + VYGAMLGAC+IHKNV   EKAA +LFELNPD+GGYHVLLANIY 
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652

Query: 481 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 540
           +AS W KV +VR +M ++GL+KTPGCS+VE++NEVHSF+SGST HP SK+IYAFLE+L  
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 712

Query: 541 EIKAAGYVPDTNSIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDC 600
            IK AGYVPDTN +  VE+ V+EQLL++HSEKLAI+FGLLNT+ GTTIH+RKNLRVC DC
Sbjct: 713 HIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADC 772

Query: 601 HNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           HNATKYISLVTGREI+VRDM RFHHFKNG CSCGDYW
Sbjct: 773 HNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lcy13g007440 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 569.7 bits (1467), Expect = 2.9e-162
Identity = 291/649 (44.84%), Postives = 413/649 (63.64%), Query Frame = 0

Query: 4   VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQRPD 63
           +V MY K  ++  +  +      RDLV+WNT+++   QN    +ALE +  M  EG  PD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 64  SITLVTVLPAAADTGSLMVGKSIHGYAIRAG-FAKLVNISTALVDMYSKCGSVETARMIF 123
             T+ +VLPA +    L  GK +H YA++ G   +   + +ALVDMY  C  V + R +F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361

Query: 124 DGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEE-GIEPTNVTIMEALHACADLGDL 183
           DGM  + +  WN+M+ GY Q+   + A+ +F  M E  G+   + T+   + AC   G  
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421

Query: 184 ERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILGY 243
            R + +H  V +  L  D  V N+L+ MYS+  K+DIA  IF  ++ + +V+WN MI GY
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481

Query: 244 AQNGRVSEALNCFCEMQSL-----------GIKPDSFTMVSVIPALAELSVTRQAKWIYG 303
             +    +AL    +MQ+L            +KP+S T+++++P+ A LS   + K I+ 
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541

Query: 304 LVIRSCLDNNVFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRA 363
             I++ L  +V V +ALVDMYAKCG + M+RK+FD I  ++VITWN +I  YG HG G+ 
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 601

Query: 364 AINLFDEMRKGTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMV 423
           AI+L   M    V+PN++TF+ V +ACSHSG+V EGL  F  MK DYG+EPS DHY  +V
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661

Query: 424 DLLGRAGRIKEAWDFIENMPIS-PGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEG 483
           DLLGRAGRIKEA+  +  MP        + ++LGA +IH N+E+GE AA  L +L P+  
Sbjct: 662 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 721

Query: 484 GYHVLLANIYASASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSK 543
            ++VLLANIY+SA  W K  EVR+ M+++G++K PGCS +E  +EVH F +G ++HPQS+
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 781

Query: 544 RIYAFLEELGDEIKAAGYVPDTNSI-HDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTI 603
           ++  +LE L + ++  GYVPDT+ + H+VE+  +E LL  HSEKLAIAFG+LNTSPGT I
Sbjct: 782 KLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 841

Query: 604 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
            + KNLRVC DCH ATK+IS +  REII+RD+ RFH FKNGTCSCGDYW
Sbjct: 842 RVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

BLAST of Lcy13g007440 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-159
Identity = 270/638 (42.32%), Postives = 406/638 (63.64%), Query Frame = 0

Query: 2   TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEG-Q 61
           + +V MY K  +++DA K+FDRMPE+D + WNT+++G+ +N    +++++   + +E   
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 62  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 121
           R D+ TL+ +LPA A+   L +G  IH  A + G      + T  + +YSKCG ++    
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 122 IFDGMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGD 181
           +F    +  +V++N+M+ GY  +GE E+++++F++++  G    + T++  +      G 
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GH 337

Query: 182 LERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILG 241
           L     +H    + N  S  SV  +L ++YSK  +++ A  +F     K++ SWNAMI G
Sbjct: 338 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 397

Query: 242 YAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNN 301
           Y QNG   +A++ F EMQ     P+  T+  ++ A A+L      KW++ LV  +  +++
Sbjct: 398 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 457

Query: 302 VFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRK 361
           ++V TAL+ MYAKCG++  AR+LFD++  ++ +TWN MI GYG HG G+ A+N+F EM  
Sbjct: 458 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 517

Query: 362 GTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 421
             + P  +TFLCV+ ACSH+GLV EG   F SM   YG EPS+ HY  MVD+LGRAG ++
Sbjct: 518 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 577

Query: 422 EAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYA 481
            A  FIE M I PG +V+  +LGAC+IHK+  L    + KLFEL+PD  GYHVLL+NI++
Sbjct: 578 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 637

Query: 482 SASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGD 541
           +   + + A VR+T +K+ L K PG +L+E+    H F SG  +HPQ K IY  LE+L  
Sbjct: 638 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 697

Query: 542 EIKAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGD 601
           +++ AGY P+T  ++HDVE+  +E ++  HSE+LAIAFGL+ T PGT I I KNLRVC D
Sbjct: 698 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 757

Query: 602 CHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
           CH  TK IS +T R I+VRD +RFHHFK+G CSCGDYW
Sbjct: 758 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of Lcy13g007440 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 560.5 bits (1443), Expect = 1.8e-159
Identity = 266/636 (41.82%), Postives = 418/636 (65.72%), Query Frame = 0

Query: 4   VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQRPD 63
           +V  Y K +++D A K+FD M ERD++SWN+I+ G+  NG A+K L + ++M   G   D
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295

Query: 64  SITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARMIFD 123
             T+V+V    AD+  + +G+++H   ++A F++       L+DMYSKCG +++A+ +F 
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355

Query: 124 GMDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADLGDLER 183
            M  ++VVS+ SM+ GY + G    A+ +FE+M EEGI P   T+   L+ CA    L+ 
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415

Query: 184 GKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMILGYAQ 243
           GK VH+ + + +LG DI V N+L+ MY+KC  +  A  +F  ++ K ++SWN +I GY++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475

Query: 244 NGRVSEALNCF-CEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLDNNVF 303
           N   +EAL+ F   ++     PD  T+  V+PA A LS   + + I+G ++R+   ++  
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535

Query: 304 VMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEMRKGT 363
           V  +LVDMYAKCGA+ +A  LFD I  + +++W  MI GYG HG G+ AI LF++MR+  
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595

Query: 364 VEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 423
           +E ++I+F+ ++ ACSHSGLV EG  +F  M+ +  +EP+++HY  +VD+L R G + +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655

Query: 424 WDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANIYASA 483
           + FIENMPI P  T++GA+L  C+IH +V+L EK A K+FEL P+  GY+VL+ANIYA A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715

Query: 484 SKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEELGDEI 543
            KW +V  +RK + ++GL+K PGCS +E++  V+ F +G +++P+++ I AFL ++   +
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775

Query: 544 KAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVCGDCH 603
              GY P T  ++ D E+  +E+ L  HSEKLA+A G++++  G  I + KNLRVCGDCH
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 835

Query: 604 NATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
              K++S +T REI++RD +RFH FK+G CSC  +W
Sbjct: 836 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of Lcy13g007440 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 550.8 bits (1418), Expect = 1.4e-156
Identity = 267/640 (41.72%), Postives = 412/640 (64.38%), Query Frame = 0

Query: 1   MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIVAGFSQNGFAKKALELVLRMQDEGQ 60
           +T +++  +    I  A ++FD +P   +  WN I+ G+S+N   + AL +   MQ    
Sbjct: 56  ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115

Query: 61  RPDSITLVTVLPAAADTGSLMVGKSIHGYAIRAGFAKLVNISTALVDMYSKCGSVETARM 120
            PDS T   +L A +    L +G+ +H    R GF   V +   L+ +Y+KC  + +AR 
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175

Query: 121 IFDG--MDQKTVVSWNSMMDGYVQSGEPEMAIAIFEKMLEEGIEPTNVTIMEALHACADL 180
           +F+G  + ++T+VSW +++  Y Q+GEP  A+ IF +M +  ++P  V ++  L+A   L
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235

Query: 181 GDLERGKFVHKLVDQLNLGSDISVMNSLISMYSKCKKVDIASDIFKSLQGKTVVSWNAMI 240
            DL++G+ +H  V ++ L  +  ++ SL +MY+KC +V  A  +F  ++   ++ WNAMI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295

Query: 241 LGYAQNGRVSEALNCFCEMQSLGIKPDSFTMVSVIPALAELSVTRQAKWIYGLVIRSCLD 300
            GYA+NG   EA++ F EM +  ++PD+ ++ S I A A++    QA+ +Y  V RS   
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355

Query: 301 NNVFVMTALVDMYAKCGAVHMARKLFDMIDDRHVITWNAMIDGYGTHGLGRAAINLFDEM 360
           ++VF+ +AL+DM+AKCG+V  AR +FD   DR V+ W+AMI GYG HG  R AI+L+  M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415

Query: 361 RKGTVEPNDITFLCVISACSHSGLVVEGLYYFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 420
            +G V PND+TFL ++ AC+HSG+V EG ++F  M  D+ + P   HY  ++DLLGRAG 
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGH 475

Query: 421 IKEAWDFIENMPISPGITVYGAMLGACKIHKNVELGEKAANKLFELNPDEGGYHVLLANI 480
           + +A++ I+ MP+ PG+TV+GA+L ACK H++VELGE AA +LF ++P   G++V L+N+
Sbjct: 476 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 535

Query: 481 YASASKWGKVAEVRKTMEKKGLQKTPGCSLVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 540
           YA+A  W +VAEVR  M++KGL K  GCS VE+R  + +F  G  +HP+ + I   +E +
Sbjct: 536 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 595

Query: 541 GDEIKAAGYVPDTN-SIHDVEDHVQEQLLNSHSEKLAIAFGLLNTSPGTTIHIRKNLRVC 600
              +K  G+V + + S+HD+ D   E+ L SHSE++AIA+GL++T  GT + I KNLR C
Sbjct: 596 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 655

Query: 601 GDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 638
            +CH ATK IS +  REI+VRD +RFHHFK+G CSCGDYW
Sbjct: 656 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3E6Q11.6e-27469.54Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q7Y2114.1e-16144.84Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9SUH61.5e-15842.32Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
Q9SN392.5e-15841.82Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9LTV82.0e-15541.72Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1G0360.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucurbit... [more]
A0A6J1CD180.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 ... [more]
A0A6J1CEW20.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X2 ... [more]
A0A6J1HPL90.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X1 ... [more]
A0A5D3CX300.0e+0092.15Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_038891367.10.0e+0092.15pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Benincasa ... [more]
XP_023541274.10.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita ... [more]
KAG6573778.10.0e+0092.31Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022945178.10.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic [Cucurbita ... [more]
XP_022139093.10.0e+0091.99pentatricopeptide repeat-containing protein At1g11290, chloroplastic isoform X2 ... [more]
Match NameE-valueIdentityDescription
AT1G11290.11.2e-27569.54Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G57430.12.9e-16244.84Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G30700.11.0e-15942.32Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18750.11.8e-15941.82Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G12770.11.4e-15641.72mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 190..291
e-value: 4.3E-15
score: 57.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 347..517
e-value: 9.2E-30
score: 106.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..84
e-value: 2.0E-19
score: 71.6
coord: 85..189
e-value: 2.8E-22
score: 80.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 331..378
e-value: 1.8E-13
score: 50.5
coord: 128..168
e-value: 8.9E-11
score: 41.8
coord: 229..277
e-value: 1.9E-13
score: 50.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 405..429
e-value: 0.071
score: 13.4
coord: 4..28
e-value: 0.0034
score: 17.5
coord: 30..59
e-value: 1.8E-5
score: 24.7
coord: 304..329
e-value: 0.082
score: 13.2
coord: 203..228
e-value: 0.015
score: 15.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 232..266
e-value: 4.6E-10
score: 37.0
coord: 30..63
e-value: 2.3E-5
score: 22.3
coord: 3..30
e-value: 5.6E-4
score: 17.9
coord: 131..164
e-value: 3.2E-10
score: 37.5
coord: 333..366
e-value: 1.4E-6
score: 26.1
coord: 368..402
e-value: 1.1E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 13.646876
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 28..62
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 331..365
score: 11.246351
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 12.945353
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 504..627
e-value: 1.1E-39
score: 135.2
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..611
NoneNo IPR availablePANTHERPTHR47928:SF126OS06G0112000 PROTEINcoord: 1..611

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g007440.1Lcy13g007440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding