Lcy13g007000 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g007000
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein LATERAL ROOT PRIMORDIUM 1
Location	Chr13: 6414721 .. 6417936 (+)
RNA-Seq Expression	Lcy13g007000
Synteny	Lcy13g007000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATTATTTATTGTTATTCCCTTCCTCTCAAGGTAAAACAACTTTGACACTGCAGAGTTTGAAAGAATCATTCATTCCAATTTCCACTCCATCTTCTTCTTCCTCTCTCTCTCTCTCTTTTCTCTGTTCCTGTGAATTGCGAGAGAATTCCACTCCATTCAACAGCAACCCAATTGCTTTTAGTCTAAGAAATTGATTCTTTTCACCATTCACAACACACTGCAAAATCCCCATCCCCCAACAAACTCAAACTCTGATTTCATCATTTAAATACTGTTCTCGCCTTCTTAACCCAAATCAGAACCACCCTCTTTCAATTTGAATCCATCGTCTTCTTTTCACAGTTTGTCAATCAACAGAGCAATGCTGGGTCTCAGAGATGTTCTGTTTATAGCTCCCACGCCTTCTTCTCTTCACCAACAGACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTGCCCTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCACTTTTGGCGGCTACCCCATGTCTCCCGCCGCCGCAGCCGCCCAATCAGACGGCCGACGAAGTTAGCGATCGCAGTCGGAGTTTGGAGAATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGTGGCGGCGGAAATAATGGCTCCGACGAGCAGGCGAAAGGCGACGCCGGCGAGGGTTCTATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGGTCTTCTGGTTCTTCCTCTGCTGGTGCTAAAAGACCTAGAGTTTTGATTCCTTCACAGAGTACTGCCGCCGCGGTCGCCGCCGCCACCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACCCCACGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTGTCTTTCATTTCTCCATTTTTGTTTTCTTGTGTTTCTTACTGAATTCAGAATCATCAGCTGCAACAATGAGTTGTTTGTTCTCTCTGTTTCTGTCTCTGTGTAATGATTTGGTTATTTGTTTCTTATGTATAATGTTAGATTAGTTTCTAATATAATGTTATTAAGTTTCAAATTTGCATTTGAATTCATGACAAAGCAATTAGACTCTGAATGATTTTGATTTTACTTCTCCCTTTCAAGATCTTGCAACAACTTTGAATATTTTGTTGAAGTAACTTAAACCTGTTCATAAAACTTACAATCTTTTCATGTTTCTCTCCCTGTTTTCCTTTCTCCAACAAGGAGGGAGTGGCTTGTCACCTGTCAAAGAATCCCTCTCTCCATAAAGATTGGCTTCAAAAGATCTTAGTGGGAAAATGGGAATTTTCTTTTGTAAAATGAGTTGAATTTTTCTTCCTCAAATCTGTTCTGTTTCTTGATTGTTTTGTTGAGGAGAAGAGCTTTTTCCTAAAACCACCTCTTGGAACTCTCATGATTTTGACAACAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCACCGGCCGTGTTCCGGTGCCATAGAGTGACAGCCATCAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGTTGATGACAAAAATGCATTCCCATCTCTTTCACACCTCCATTTGGAAAGTGGTAATCACCACAGGGAATAGACATTCCCTCCTCTTCTTTCTTCTCCAACTCTCCTTCCCTTCACTCTCCCCCGAGAACTCGGTCTCGGCCACTCGAAAAATATCATCTCTACTAGGATTCAGTGATCTGTTATGTTATCTACCAAGTTCTATATAGTTGTTTTCATGGTGGTAATGCAATGAATCTGCTGCACTAAATAGAACACAAAAAGTGCAGAGTTGTAATAGGATCTTCTATTCTATAGTTCTTCTAGCCTTAATCTGGGGTTAGTGTAAAATTTCTCAAGTCCAATGATAGTGTTGGATACTGATCTTCTGTATATTGCTAAGAAGATGATTAACTTTCATCTATCAAACTTCATTAAACATCTGCTGAAGCAAGCTAGCTTGTCCTATCTCATGACAGTTGCATTATATGTTGGGAATACAGGAGTTTAGTCTCTTGTTTGCTTGTCTATCTCGGAAAGTTTTACGAAACAGATGTAATCGTCGGTCTTCGAACGATTGAACATCGAGCATCTTCTCGTGAATGCCACCATGGTGGGACAGACAAAATGTATGCAATGTTTCTTGCTTCTGCATTACCATCTTTTACCTACAACTTTGATCATTTTCACTGATTTGGGTCTTTTCTAATTATGGGATGGCTTCAATAAATGGAAGTCATTTATTTGATTGAGACGACCTTGCTTGATGGTGAATACGTAGCGGGAAATCGAATAGGTAAAGTCGGACCCCACACGGACGATATTAGCAGAAGATGAAAGTAACTAAACTGCAGTCCCATTGCATCTCATTTCTTGCAAAAGAGGGCAGGAAAATGGAGATGAACACTAAAAACTGAAAGGTGGGGAGAAGAGCCAAGGAGTCAACAATTACTAAAACTTGAAAACAAATGAAAAGAAGCATTAATGGAGGAGAGAAAGGATGAAGCAAAACAGTACAATTTGGCCCTCAGCTGTTAAAGGGTTTTGCTTCCCAGATGAAGTTGCAAGCATTAACAAGAAGTCATGCATTAAAAGACATGAACAAAATCCATAGGCTCTCACAAGCTCACAATCCAACCCCCTTTTGTCTTTTCATGTAGGAATTGTTGGCCCCTCATTGTACCAAGTGTAGGAGATTGACTCCAACTACATATCATTGCAAATGGCAAAGAGATGTGACAAGTGGTATGGGAAAAAGATGTTTGAGAACCCGTGGCTCGAAAGACGAGACTAGTCGCTAATCCAGAAGATCATGAGTTTAAACTGTATTGAGTGGGTATGTAGGATATTCTATATCTTAGATCCAAAATGTCGTAGGATTAAGTTGTTTAGTGGAATGAGTTAAGGTATTTGTCAGCTAACTCGAATATCTACTTGTCGAAGAATAACAAACCAAATTCA

mRNA sequence

GCCATTATTTATTGTTATTCCCTTCCTCTCAAGGTAAAACAACTTTGACACTGCAGAGTTTGAAAGAATCATTCATTCCAATTTCCACTCCATCTTCTTCTTCCTCTCTCTCTCTCTCTTTTCTCTGTTCCTGTGAATTGCGAGAGAATTCCACTCCATTCAACAGCAACCCAATTGCTTTTAGTCTAAGAAATTGATTCTTTTCACCATTCACAACACACTGCAAAATCCCCATCCCCCAACAAACTCAAACTCTGATTTCATCATTTAAATACTGTTCTCGCCTTCTTAACCCAAATCAGAACCACCCTCTTTCAATTTGAATCCATCGTCTTCTTTTCACAGTTTGTCAATCAACAGAGCAATGCTGGGTCTCAGAGATGTTCTGTTTATAGCTCCCACGCCTTCTTCTCTTCACCAACAGACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTGCCCTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCACTTTTGGCGGCTACCCCATGTCTCCCGCCGCCGCAGCCGCCCAATCAGACGGCCGACGAAGTTAGCGATCGCAGTCGGAGTTTGGAGAATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGTGGCGGCGGAAATAATGGCTCCGACGAGCAGGCGAAAGGCGACGCCGGCGAGGGTTCTATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGGTCTTCTGGTTCTTCCTCTGCTGGTGCTAAAAGACCTAGAGTTTTGATTCCTTCACAGAGTACTGCCGCCGCGGTCGCCGCCGCCACCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACCCCACGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTGTCTTTCATTTCTCCATTTTTGTTTTCTTGTGTTTCTTACTGAATTCAGAATCATCAGCTGCAACAATGAGTTGTTTGTTCTCTCTGTTTCTGTCTCTGTGTAATGATTTGGTTATTTGTTTCTTATGTATAATGTTAGATTAGTTTCTAATATAATGTTATTAAGTTTCAAATTTGCATTTGAATTCATGACAAAGCAATTAGACTCTGAATGATTTTGATTTTACTTCTCCCTTTCAAGATCTTGCAACAACTTTGAATATTTTGTTGAAGTAACTTAAACCTGTTCATAAAACTTACAATCTTTTCATGTTTCTCTCCCTGTTTTCCTTTCTCCAACAAGGAGGGAGTGGCTTGTCACCTGTCAAAGAATCCCTCTCTCCATAAAGATTGGCTTCAAAAGATCTTAGTGGGAAAATGGGAATTTTCTTTTGTAAAATGAGTTGAATTTTTCTTCCTCAAATCTGTTCTGTTTCTTGATTGTTTTGTTGAGGAGAAGAGCTTTTTCCTAAAACCACCTCTTGGAACTCTCATGATTTTGACAACAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCACCGGCCGTGTTCCGGTGCCATAGAGTGACAGCCATCAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGTTGATGACAAAAATGCATTCCCATCTCTTTCACACCTCCATTTGGAAAGTGGTAATCACCACAGGGAATAGACATTCCCTCCTCTTCTTTCTTCTCCAACTCTCCTTCCCTTCACTCTCCCCCGAGAACTCGGTCTCGGCCACTCGAAAAATATCATCTCTACTAGGATTCAGTGATCTGTTATGTTATCTACCAAGTTCTATATAGTTGTTTTCATGGTGGTAATGCAATGAATCTGCTGCACTAAATAGAACACAAAAAGTGCAGAGTTGTAATAGGATCTTCTATTCTATAGTTCTTCTAGCCTTAATCTGGGGTTAGTGTAAAATTTCTCAAGTCCAATGATAGTGTTGGATACTGATCTTCTGTATATTGCTAAGAAGATGATTAACTTTCATCTATCAAACTTCATTAAACATCTGCTGAAGCAAGCTAGCTTGTCCTATCTCATGACAGTTGCATTATATGTTGGGAATACAGGAGTTTAGTCTCTTGTTTGCTTGTCTATCTCGGAAAGTTTTACGAAACAGATGTAATCGTCGGTCTTCGAACGATTGAACATCGAGCATCTTCTCGTGAATGCCACCATGGTGGGACAGACAAAATTCATTTATTTGATTGAGACGACCTTGCTTGATGGTGAATACGTAGCGGGAAATCGAATAGGTAAAGTCGGACCCCACACGGACGATATTAGCAGAAGATGAAAGTAACTAAACTGCAGTCCCATTGCATCTCATTTCTTGCAAAAGAGGGCAGGAAAATGGAGATGAACACTAAAAACTGAAAGGTGGGGAGAAGAGCCAAGGAGTCAACAATTACTAAAACTTGAAAACAAATGAAAAGAAGCATTAATGGAGGAGAGAAAGGATGAAGCAAAACAGTACAATTTGGCCCTCAGCTGTTAAAGGGTTTTGCTTCCCAGATGAAGTTGCAAGCATTAACAAGAAGTCATGCATTAAAAGACATGAACAAAATCCATAGGCTCTCACAAGCTCACAATCCAACCCCCTTTTGTCTTTTCATGTAGGAATTGTTGGCCCCTCATTGTACCAAGTGTAGGAGATTGACTCCAACTACATATCATTGCAAATGGCAAAGAGATGTGACAAGTGGTATGGGAAAAAGATGTTTGAGAACCCGTGGCTCGAAAGACGAGACTAGTCGCTAATCCAGAAGATCATGAGTTTAAACTGTATTGAGTGGGTATGTAGGATATTCTATATCTTAGATCCAAAATGTCGTAGGATTAAGTTGTTTAGTGGAATGAGTTAAGGTATTTGTCAGCTAACTCGAATATCTACTTGTCGAAGAATAACAAACCAAATTCA

Coding sequence (CDS)

ATGCTGGGTCTCAGAGATGTTCTGTTTATAGCTCCCACGCCTTCTTCTCTTCACCAACAGACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTGCCCTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCACTTTTGGCGGCTACCCCATGTCTCCCGCCGCCGCAGCCGCCCAATCAGACGGCCGACGAAGTTAGCGATCGCAGTCGGAGTTTGGAGAATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGTGGCGGCGGAAATAATGGCTCCGACGAGCAGGCGAAAGGCGACGCCGGCGAGGGTTCTATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGGTCTTCTGGTTCTTCCTCTGCTGGTGCTAAAAGACCTAGAGTTTTGATTCCTTCACAGAGTACTGCCGCCGCGGTCGCCGCCGCCACCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACCCCACGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTGTCTTTCATTTCTCCATTTTTGTTTTCTTGTGTTTCTTACTGA

Protein sequence

MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKSLSFISPFLFSCVSY

Homology

[Close]

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-28
Identity = 100/235 (42.55%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA----GTPQ 62

Query: 61  PPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMA 120
              + +D      + R ++  N   TQ   F   +    G  +N S       +G    A
Sbjct: 63  QNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGASGTA 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 181 DGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQ 232
             GSS S+S+G K+PR++   Q          A SH STSN T P+SFET+SS Q
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQ-----QQQQATSHTSTSN-TPPQSFETSSSRQ 214

[Close]

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 118 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVM--DGVATAS 177
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M   G    S
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153

Query: 178 GDGGSSGSSSAGAKRPR-VLIPSQSTAAAVAAATA 210
           G GG+ G  S+  KR R   +P  S+++ + + +A
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSA 188

[Close]

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 118 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRER 163
           C+DCGN+AKK+C + RCRTCCK RG HC THVKSTWVPAA+RRER
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRER 169

[Close]

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.5e-15
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 76  LENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGD-----AGEGSMAVCRDCGNRAKKECE 135
           L++L  T D G G G S  G   + G  E ++       +G G ++ C+DCGN+AKK+C+
Sbjct: 84  LQDLYST-DVGLGVGPSRSGFDISAGDHEASRSGFVMMRSGGGGIS-CQDCGNQAKKDCQ 143

Query: 136 YRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQ 164
           + RCRTCCK RG  C THVKSTWVPAA+RRERQ
Sbjct: 144 HMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ 174

[Close]

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.3e-13
Identity = 54/117 (46.15%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 94  IGGGGNNGSDEQAKGDA------GEGSMA-VCRDCGNRAKKECEYRRCRTCCKGRGNHCS 153
           +G G +N S  +  G A      G GS    C+DCGN++KK+C + RCRTCCK RG  C 
Sbjct: 89  LGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCP 148

Query: 154 THVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAA 204
           THVKSTWVPAA+RRERQ       ++T        GS     KR R  IP++ST+ A
Sbjct: 149 THVKSTWVPAAKRRERQ-----QQLSTGQQPQQLGGSV---PKRQRERIPARSTSMA 197

[Close]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.8e-105
Identity = 207/238 (86.97%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKSLS 237
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ + L+
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDQFLN 231

[Close]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.0e-105
Identity = 207/236 (87.71%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ  S
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDAS 229

[Close]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 206/236 (87.29%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLI G GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ  S
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDAS 229

[Close]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.9e-99
Identity = 202/251 (80.48%), Postives = 214/251 (85.26%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQ TQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP-- 60

Query: 61  PPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVCRD 120
           PPNQ  DE+SDRSRSLENLKRTQDFGFGKGDSLIGGGGN+G D+Q KGD G+GS+ VCRD
Sbjct: 61  PPNQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCRD 120

Query: 121 CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGS 180
           CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GS
Sbjct: 121 CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----GS 180

Query: 181 SGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKSL----- 240
           SGSSSAGAKRP+VLIPSQ+TAAA A       ASTSNATTPRSFETTSSHQ  S      
Sbjct: 181 SGSSSAGAKRPKVLIPSQTTAAAAA-------ASTSNATTPRSFETTSSHQDASFKKSLP 238

Query: 241 -SFISPFLFSC 246
               +P +F C
Sbjct: 241 GQVQAPAVFKC 238

[Close]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL
Match: A0A6J1CEG6 (protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 202/235 (85.96%), Postives = 212/235 (90.21%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPP 60
           MLGLRDVLFIAPTPSSLHQQ TQI+SSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP P
Sbjct: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64

Query: 61  QPPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVCR 120
            PP   A EVS+R R ++NLKRTQDFGFGKGDSLI  GGNN  DE  +GDAG+ SM VCR
Sbjct: 65  PPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLI-AGGNNALDEPVRGDAGDSSMGVCR 124

Query: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGG
Sbjct: 125 DCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGG 184

Query: 181 SSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           SSGSSSAGAKRPRVLIPSQSTAA  AAA +ASHASTSNATTPRSFET+S+HQ  S
Sbjct: 185 SSGSSSAGAKRPRVLIPSQSTAA--AAAASASHASTSNATTPRSFETSSNHQDAS 235

[Close]

BLAST of Lcy13g007000 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.9e-109
Identity = 215/235 (91.49%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSSAALGVSVGIFPLL ATPCLPPPQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPPQ 60

Query: 61  P-PNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVCR 120
           P PNQTAD+V+DRSRSLENLKRTQDFGFGKGDSL+GG GNN SDEQ KGDAG+GSMAVCR
Sbjct: 61  PLPNQTADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVCR 120

Query: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG
Sbjct: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180

Query: 181 SSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           SSGSSSAGAKRPRVLIPSQSTAAA A       ASTSNATTPRSFETTSSHQ  S
Sbjct: 181 SSGSSSAGAKRPRVLIPSQSTAAAAA-------ASTSNATTPRSFETTSSHQDAS 228

[Close]

BLAST of Lcy13g007000 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 7.8e-105
Identity = 207/238 (86.97%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKSLS 237
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ + L+
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDQFLN 231

[Close]

BLAST of Lcy13g007000 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-104
Identity = 207/236 (87.71%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLIGG GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ  S
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDAS 229

[Close]

BLAST of Lcy13g007000 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 5.1e-104
Identity = 206/236 (87.29%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PP--NQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVC 120
           PP  N T D+V+DR+R+ +NLKRTQDFGFGKG+SLI G GNNGSDE  KGDAG+GSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKS 235
           GSSGSSSAGAKRPRVLIPSQS AAA A       ASTSNATTPRSFETTSSHQ  S
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAA-------ASTSNATTPRSFETTSSHQDAS 229

[Close]

BLAST of Lcy13g007000 vs. NCBI nr
Match: XP_022956997.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 1.4e-98
Identity = 202/251 (80.48%), Postives = 214/251 (85.26%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQ TQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP-- 60

Query: 61  PPNQTADEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMAVCRD 120
           PPNQ  DE+SDRSRSLENLKRTQDFGFGKGDSLIGGGGN+G D+Q KGD G+GS+ VCRD
Sbjct: 61  PPNQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCRD 120

Query: 121 CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGS 180
           CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GS
Sbjct: 121 CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----GS 180

Query: 181 SGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQGKSL----- 240
           SGSSSAGAKRP+VLIPSQ+TAAA A       ASTSNATTPRSFETTSSHQ  S      
Sbjct: 181 SGSSSAGAKRPKVLIPSQTTAAAAA-------ASTSNATTPRSFETTSSHQDASFKKSLP 238

Query: 241 -SFISPFLFSC 246
               +P +F C
Sbjct: 241 GQVQAPAVFKC 238

[Close]

BLAST of Lcy13g007000 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-30
Identity = 101/236 (42.80%), Postives = 131/236 (55.51%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA----GTPQ 62

Query: 61  PPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMA 120
              + +D      + R ++  N   TQ   F   +    G  +N S       +G    A
Sbjct: 63  QNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGASGTA 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 181 DGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQG 233
             GSS S+S+G K+PR++   Q          A SH STSN T P+SFET+SS QG
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQ-----QQQQATSHTSTSN-TPPQSFETSSSRQG 215

[Close]

BLAST of Lcy13g007000 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 100/235 (42.55%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA----GTPQ 62

Query: 61  PPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMA 120
              + +D      + R ++  N   TQ   F   +    G  +N S       +G    A
Sbjct: 63  QNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGASGTA 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 181 DGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQ 232
             GSS S+S+G K+PR++   Q          A SH STSN T P+SFET+SS Q
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQ-----QQQQATSHTSTSN-TPPQSFETSSSRQ 214

[Close]

BLAST of Lcy13g007000 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 100/235 (42.55%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA----GTPQ 62

Query: 61  PPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMA 120
              + +D      + R ++  N   TQ   F   +    G  +N S       +G    A
Sbjct: 63  QNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGASGTA 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 181 DGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQ 232
             GSS S+S+G K+PR++   Q          A SH STSN T P+SFET+SS Q
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQ-----QQQQATSHTSTSN-TPPQSFETSSSRQ 214

[Close]

BLAST of Lcy13g007000 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 100/235 (42.55%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A      PQ
Sbjct: 90  MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA----GTPQ 149

Query: 61  PPNQTAD----EVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNNGSDEQAKGDAGEGSMA 120
              + +D      + R ++  N   TQ   F   +    G  +N S       +G    A
Sbjct: 150 QNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGASGTA 209

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+ 
Sbjct: 210 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 269

Query: 181 DGGSSGSSSAGAKRPRVLIPSQSTAAAVAAATAASHASTSNATTPRSFETTSSHQ 232
             GSS S+S+G K+PR++   Q          A SH STSN T P+SFET+SS Q
Sbjct: 270 TAGSSLSTSSGTKKPRIVGSQQQ-----QQQQATSHTSTSN-TPPQSFETSSSRQ 301

[Close]

BLAST of Lcy13g007000 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-18
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 118 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVM--DGVATAS 177
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M   G    S
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153

Query: 178 GDGGSSGSSSAGAKRPR-VLIPSQSTAAAVAAATA 210
           G GG+ G  S+  KR R   +P  S+++ + + +A
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSA 188

The following BLAST results are available for this feature:

BLAST of Lcy13g007000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	6.2e-28	42.55	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	1.1e-16	51.58	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9LQZ5	2.1e-15	77.78	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
K4B6C9	3.5e-15	51.61	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9XGX0	7.3e-13	46.15	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]

BLAST of Lcy13g007000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCT8	3.8e-105	86.97	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BFS5	5.0e-105	87.71	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A0A0KWX6	2.5e-104	87.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A6J1GXY1	6.9e-99	80.48	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CEG6	2.6e-98	85.96	protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988...	[more]

BLAST of Lcy13g007000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892899.1	6.9e-109	91.49	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
KAA0034761.1	7.8e-105	86.97	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]
XP_008446964.1	1.0e-104	87.71	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
XP_004142483.1	5.1e-104	87.29	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
XP_022956997.1	1.4e-98	80.48	protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]	[more]

BLAST of Lcy13g007000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.3	8.8e-30	42.80	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.2	4.4e-29	42.55	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	4.4e-29	42.55	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.4	4.4e-29	42.55	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	7.8e-18	51.58	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 116..222 e-value: 8.1E-31 score: 107.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR31604:SF24	LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN	coord: 1..227
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 117..159 e-value: 1.0E-24 score: 84.2
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g007000.1	Lcy13g007000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding