Lcy13g006940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g006940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	two-component response regulator ORR9-like
Location	Chr13: 6258163 .. 6260301 (-)
RNA-Seq Expression	Lcy13g006940
Synteny	Lcy13g006940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATTAAAAAAAACCCAAAAAGTCAAAGCATAAAATAATTGAGAAATGGAAAGAAAGAAAAATAAAAGTCCAAAGAAATAATAATAATAATTTTTTTTATTTTTTAAGAAAGAAAATTGGGAAGAAGAAAAAAGAAAATGAAAGCAAAGCAAAGCACCTTCTTCTTTGCTTCTTGTTGAATTCAAAAGAATCAAACCCTAAAAGATCCGCGAGATTCTGTAACAAAATCTGTCGGATCTCCCTTTCCAAACTGTCACAATTTTCTAAGGATTTCGCCATATCTCATACTAATCCAACACCATGCCTTTCTTCTCCATTTATAAACCCTTTCTTCTTCCTTGCCTTCTTCGCAAATCCCTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTTTGATTTCAAGGAATTCCCATGGCTCTTCTCTCTGCTGAGGCTCAGTTTCATGTCTTGGCTGTTGATGACAGCCTCGTTGATCGGAAGCTGATCGAAAGACTCCTCAAAACCTCCTCCTTCAATGGTAATCTGCTACTCATCCCTCTCTATTCTCTCTGTTTTTCTTGCTTCTGTTCTTCAGAATATGAATTCTTCATCAAATCTATTGTGAGTTTCTGGGTTGAGTGGTGATTTGATCTGATTTGGAATTTGAGCTTTACTTGTTAGGTTTTGAGTAAGGGAAAGTTTGAGAATATATAGATGATTAAATGGCCTATCTACATGAGCTCTTGGTTGGGTTGAGTGGTAATTTAGTATGATGTGAATGTGAATGTGATTTTCTCCTCAATTACTGTTGATAGTCACTTGTTAGGTCTTGTGTCGATTTTTTAGTATAAATGATTAAATAGTTTATCGGCGTTGGGTTGGGTTGAGTGGTGATTTAATATGATACCGGATGAACTCTTGGAATGTGGTTTTCTCTCGGATTACTATTGATAGTCACTTGTTGGGTCTTGTGCTGTTTCTCGAGTCCGGGAGGGAACTTCGAGAATAAATGATTAAATAGTCTTTCGGTTGGGTTGAGTGGTGATTTAACAAGTGGGTCGGGTTTGATTGTTATTCACAGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTACTCGGTTTGGTTAGAGAGAGAAATGGAAGCACCCATTCTCCTGTTTCCCCTGAAAATCATCATCACCATCATCAGGTAAGTTAACAGTTGCCAAGTTGAGTTTTGATTTGGTCTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTTTGGGCTTTGTTTGATTTGTTTTCTTTTATCATTGATGCAGGAAATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGCAAGTTTCTTCTTCTTTTTAAGATAATATTCACTTTTCAAGCAATTTTCTCTCTCATTCCAAACAGAAATTTTGAATGGAAAATCTCATCTGGTTTTGCAGGGATCTGACTCACTTAAAGACATTCCTGTCGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGGTTAGGGAAACTGCTAGAATAAGAATCATTTTAAAAAAAAAAAACAAAATCGAAATCCGAATCAATAAACAAGAAGATTCGTGTGTAATCTGAACTGGGTTTTGGTTTTTGTTTTGAATCAGATGTTTAGAAGAAGGAGCTGAGGAGTTTCTGCTAAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATTTGTAGAGGAAAAGCCAAGGAAATGGAATCCAACAATCTCAAGAGAAAGGAAATGGGGTCTGCCCAATCATCTGAGAGAACAAGAACAAAATACAATGATCATTCCTTCTAAACATTTGGTTCATATTACTAAATTTCTTTTTAGTGAATGTACCTTCGAATGTTACGAGAGTGACAGTCATTTTGAATTTGTCTAAATGTACAAAGTTGATGAAAATTCAGATTTTTAGACTTAGAAATCTCATTGTTTTGTAGTTTAGATATGTGCAACTCATGATTTGATCTCTGCCAAACAAACAAAATAAAGGCATACAATTCCTTTTCTTTTAATTTTCCAATTTTGGCTTTGACCCATTAATAAGATTGCTG

mRNA sequence

AATTTATTAAAAAAAACCCAAAAAGTCAAAGCATAAAATAATTGAGAAATGGAAAGAAAGAAAAATAAAAGTCCAAAGAAATAATAATAATAATTTTTTTTATTTTTTAAGAAAGAAAATTGGGAAGAAGAAAAAAGAAAATGAAAGCAAAGCAAAGCACCTTCTTCTTTGCTTCTTGTTGAATTCAAAAGAATCAAACCCTAAAAGATCCGCGAGATTCTGTAACAAAATCTGTCGGATCTCCCTTTCCAAACTGTCACAATTTTCTAAGGATTTCGCCATATCTCATACTAATCCAACACCATGCCTTTCTTCTCCATTTATAAACCCTTTCTTCTTCCTTGCCTTCTTCGCAAATCCCTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTTTGATTTCAAGGAATTCCCATGGCTCTTCTCTCTGCTGAGGCTCAGTTTCATGTCTTGGCTGTTGATGACAGCCTCGTTGATCGGAAGCTGATCGAAAGACTCCTCAAAACCTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTACTCGGTTTGGTTAGAGAGAGAAATGGAAGCACCCATTCTCCTGTTTCCCCTGAAAATCATCATCACCATCATCAGGAAATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGGATCTGACTCACTTAAAGACATTCCTGTCGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTAGAAGAAGGAGCTGAGGAGTTTCTGCTAAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATTTGTAGAGGAAAAGCCAAGGAAATGGAATCCAACAATCTCAAGAGAAAGGAAATGGGGTCTGCCCAATCATCTGAGAGAACAAGAACAAAATACAATGATCATTCCTTCTAAACATTTGGTTCATATTACTAAATTTCTTTTTAGTGAATGTACCTTCGAATGTTACGAGAGTGACAGTCATTTTGAATTTGTCTAAATGTACAAAGTTGATGAAAATTCAGATTTTTAGACTTAGAAATCTCATTGTTTTGTAGTTTAGATATGTGCAACTCATGATTTGATCTCTGCCAAACAAACAAAATAAAGGCATACAATTCCTTTTCTTTTAATTTTCCAATTTTGGCTTTGACCCATTAATAAGATTGCTG

Coding sequence (CDS)

ATGGCTCTTCTCTCTGCTGAGGCTCAGTTTCATGTCTTGGCTGTTGATGACAGCCTCGTTGATCGGAAGCTGATCGAAAGACTCCTCAAAACCTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTACTCGGTTTGGTTAGAGAGAGAAATGGAAGCACCCATTCTCCTGTTTCCCCTGAAAATCATCATCACCATCATCAGGAAATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGGATCTGACTCACTTAAAGACATTCCTGTCGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTAGAAGAAGGAGCTGAGGAGTTTCTGCTAAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATTTGTAGAGGAAAAGCCAAGGAAATGGAATCCAACAATCTCAAGAGAAAGGAAATGGGGTCTGCCCAATCATCTGAGAGAACAAGAACAAAATACAATGATCATTCCTTCTAA

Protein sequence

MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTKYNDHSF

Homology

[Close]

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.4e-53
Identity = 108/153 (70.59%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           M ++ AE++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S+ 
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSR 120
           SP S       HQEI+VNLIITDYCMP MTGYDLL+++KGS SLKDIPVVIMSSENVP+R
Sbjct: 61  SPSSSS---PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPAR 120

Query: 121 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 154
           INRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 INRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.4e-53
Identity = 108/153 (70.59%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           M ++ AE++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL  E + S+ 
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  SPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSR 120
           SP S       HQEI+VNLIITDYCMP MTGYDLL+++KGS SLKDIPVVIMSSENVP+R
Sbjct: 61  SPSSSS---PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPAR 120

Query: 121 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 154
           INRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 INRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50
Identity = 111/187 (59.36%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 4   LSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPV 63
           ++ EA FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +    SP+
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL----HDHEDSPI 62

Query: 64  SPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINR 123
           S ++     QE+ VNLIITDYCMP MTGYDLL+KIK S  L+DIPVVIMSS+N+PSRINR
Sbjct: 63  STQS---DQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 122

Query: 124 CLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-------MESNNLKRKEMGSAQSSERT 183
           CLEEGA+EF LKPV+LSD++KLKP I + + KE       ++SN+           +  +
Sbjct: 123 CLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTSENSSS 182

[Close]

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50
Identity = 111/187 (59.36%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 4   LSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPV 63
           ++ EA FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +    SP+
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL----HDHEDSPI 62

Query: 64  SPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINR 123
           S ++     QE+ VNLIITDYCMP MTGYDLL+KIK S  L+DIPVVIMSS+N+PSRINR
Sbjct: 63  STQS---DQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 122

Query: 124 CLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-------MESNNLKRKEMGSAQSSERT 183
           CLEEGA+EF LKPV+LSD++KLKP I + + KE       ++SN+           +  +
Sbjct: 123 CLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTSENSSS 182

[Close]

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.9e-50
Identity = 111/187 (59.36%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 4   LSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPV 63
           ++ EA FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +    SP+
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL----HDHEDSPI 62

Query: 64  SPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINR 123
           S ++     QE+ VNLIITDYCMP MTGYDLL+KIK S  L+DIPVVIMSS+N+PSRINR
Sbjct: 63  STQS---DQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINR 122

Query: 124 CLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-------MESNNLKRKEMGSAQSSERT 183
           CLEEGA+EF LKPV+LSD++KLKP I + + KE       ++SN+           +  +
Sbjct: 123 CLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSSNPTSENSSS 182

[Close]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL
Match: A0A6J1GZT5 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like OS=Cucurbita moschata OX=3662 GN=LOC111458336 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.8e-86
Identity = 167/182 (91.76%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           MAL+S+ AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 52  MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 111

Query: 61  SPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSR 120
           SP SPENHHH HQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENVP+R
Sbjct: 112 SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPAR 171

Query: 121 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTKY 180
           INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEM+ NNLKRKEM  +QSSERTR KY
Sbjct: 172 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKY 231

Query: 181 ND 183
           N+
Sbjct: 232 NE 233

[Close]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL
Match: A0A5A7SZL1 (Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007810 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MALLSA-EAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGST 60
           M+LLS+ + +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPVSPENH-HHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENV 120
           H SP+SPENH  HHHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENV
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMESNNLKRKEM 168
           PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE++ N+LKRKEM
Sbjct: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 171

[Close]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL
Match: A0A1S3BH64 (two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC103489512 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MALLSA-EAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGST 60
           M+LLS+ + +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPVSPENH-HHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENV 120
           H SP+SPENH  HHHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENV
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMESNNLKRKEM 168
           PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE++ N+LKRKEM
Sbjct: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 171

[Close]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL
Match: A0A0A0KV44 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623800 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.9e-73
Identity = 150/170 (88.24%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MALLSA-EAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGST 60
           M+LLS+ + +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVP 120
           H SP+SPE+H  HHQEIEVNLIITDYCMPEMTG+DLLRKIK SDSLKDIPVVIMSSENVP
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120

Query: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMESNNLKRKEM 168
           SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEM+ N+LKRKEM
Sbjct: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEM 170

[Close]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL
Match: A0A6J1CBT9 (two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC111010126 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.0e-70
Identity = 151/181 (83.43%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 2   ALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG---S 61
           A++SAEAQFHVLAVDDSL+DRKLIERLLKTSSFNVTAVDSGSKALELLGLVR+RNG   S
Sbjct: 3   AVVSAEAQFHVLAVDDSLIDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRDRNGGGSS 62

Query: 62  THSPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVP 121
            HS VSP      HQEIEVN+IITDYCMPEMTGYDLLRKIK S+SLKDIPVVIMSSENVP
Sbjct: 63  IHSSVSP-----LHQEIEVNMIITDYCMPEMTGYDLLRKIKESESLKDIPVVIMSSENVP 122

Query: 122 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRT 180
           SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEME          S QS ERTRT
Sbjct: 123 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMEQ---------SQQSYERTRT 169

[Close]

BLAST of Lcy13g006940 vs. NCBI nr
Match: XP_038892701.1 (two-component response regulator ORR4-like [Benincasa hispida])

HSP 1 Score: 327.4 bits (838), Expect = 7.9e-86
Identity = 169/186 (90.86%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           MALLSAE +FHVLAVDDSL+DRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 1   MALLSAEPRFHVLAVDDSLIDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSNH 60

Query: 61  SPVSPEN----HHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSEN 120
           SP+SPEN    HHHHHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSEN
Sbjct: 61  SPISPENHHHYHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSEN 120

Query: 121 VPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERT 180
           VPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK KEM+ NNLKRKEM  +QSSERT
Sbjct: 121 VPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKDKEMDINNLKRKEMEKSQSSERT 180

Query: 181 RTKYND 183
           RTKYN+
Sbjct: 181 RTKYNE 186

[Close]

BLAST of Lcy13g006940 vs. NCBI nr
Match: XP_022956694.1 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 7.9e-86
Identity = 167/182 (91.76%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           MAL+S+ AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 52  MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 111

Query: 61  SPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSR 120
           SP SPENHHH HQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENVP+R
Sbjct: 112 SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPAR 171

Query: 121 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTKY 180
           INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEM+ NNLKRKEM  +QSSERTR KY
Sbjct: 172 INRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKY 231

Query: 181 ND 183
           N+
Sbjct: 232 NE 233

[Close]

BLAST of Lcy13g006940 vs. NCBI nr
Match: XP_023526911.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 8.8e-85
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           MAL+S+ AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60

Query: 61  SPVSPENHHH-HHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPS 120
           SP  PENHHH HHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENVP+
Sbjct: 61  SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPA 120

Query: 121 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTK 180
           RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEM+ NNLKRKEM  +QSSERTR K
Sbjct: 121 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAK 180

Query: 181 YND 183
           YN+
Sbjct: 181 YNE 183

[Close]

BLAST of Lcy13g006940 vs. NCBI nr
Match: KAG6601130.1 (Two-component response regulator ORR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTH 60
           MAL+S+ AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60

Query: 61  SPVSPENHHH-HHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPS 120
           SP SPENH+H HHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENVP+
Sbjct: 61  SPFSPENHNHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPA 120

Query: 121 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTK 180
           RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEM+ N+LKRKEM  +QSSERTR K
Sbjct: 121 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNSLKRKEMEQSQSSERTRAK 180

Query: 181 YND 183
           YN+
Sbjct: 181 YNE 183

[Close]

BLAST of Lcy13g006940 vs. NCBI nr
Match: XP_008446956.1 (PREDICTED: two-component response regulator ORR9-like [Cucumis melo] >KAA0034757.1 two-component response regulator ORR9-like [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MALLSA-EAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGST 60
           M+LLS+ + +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPVSPENH-HHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENV 120
           H SP+SPENH  HHHQEIEVNLIITDYCMPEMTGYDLLRKIK SDSLKDIPVVIMSSENV
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMESNNLKRKEM 168
           PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE++ N+LKRKEM
Sbjct: 121 PSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 171

[Close]

BLAST of Lcy13g006940 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 194.9 bits (494), Expect = 5.7e-50
Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 4   LSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPV 63
           ++AE+QFHVLAVDDSL DRKLIERLL+ SS  VT VDSGSKALE LGL   ++  ++ P 
Sbjct: 3   MAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSNDPN 62

Query: 64  SPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINR 123
           +      +HQ +EVNLIITDYCMP MTGYDLL+K+K S + +DIPVVIMSSENVP+RI+R
Sbjct: 63  AFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISR 122

Query: 124 CLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLK 164
           CLEEGAEEF LKPV+L+D+NKLKP + + K K  +   ++
Sbjct: 123 CLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIE 160

[Close]

BLAST of Lcy13g006940 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 114/223 (51.12%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 3   LLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSP 62
           ++  E++FHVLAVDDSL DRK+IERLL+ SS  VT VDSGSKALE LGL  + N      
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 63  VSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRIN 122
            SP+     HQE+E+NLIITDYCMP MTGYDLL+K+K S + + IPVVIMSSENVP+RI+
Sbjct: 62  TSPQ----IHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARIS 121

Query: 123 RCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAK--------------------------- 182
           RCLEEGAEEF LKPVKL+D+ KLKP + + K K                           
Sbjct: 122 RCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPEIEEEEEESS 181

[Close]

BLAST of Lcy13g006940 vs. TAIR 10
Match: AT1G74890.1 (response regulator 15 )

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40
Identity = 92/185 (49.73%), Postives = 127/185 (68.65%), Query Frame = 0


Query: 5   SAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPVS 64
           S+  + HVLAVDDS VDRK+IERLLK S+  VT V+SG++AL+ LGL  + NGS+     
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGD-NGSSGL--- 72

Query: 65  PENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINRC 124
                   ++++VNLI+TDY MP +TGY+LL+KIK S +L++IPVVIMSSEN+  RI +C
Sbjct: 73  --------KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQC 132

Query: 125 LEEGAEEFLLKPVKLSDVNKLKPFICR------GKAKEMESNNLKRKEMGSAQSSERTRT 184
           + EGAEEFLLKPVKL+DV +LK  I R      GK K++    + + ++ S+ SS  T +
Sbjct: 133 MIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSS 185

[Close]

BLAST of Lcy13g006940 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40
Identity = 89/155 (57.42%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 9   QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPVSPENH 68
           Q HVLAVDDSLVDR +IERLL+ +S  VTAVDSG +ALE LGL  ++             
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAV---------- 91

Query: 69  HHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINRCLEEG 128
                 ++V+LIITDYCMP MTGY+LL+KIK S S K++PVVIMSSENV +RI+RCLEEG
Sbjct: 92  --EFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEG 151

Query: 129 AEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLK 164
           AE+FLLKPVKL+DV +L+ ++ R      E N  K
Sbjct: 152 AEDFLLKPVKLADVKRLRSYLTRDVKVAAEGNKRK 174

[Close]

BLAST of Lcy13g006940 vs. TAIR 10
Match: AT1G19050.1 (response regulator 7 )

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 90/180 (50.00%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 9   QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPVSPENH 68
           + HVLAVDDS+VDRK+IERLL+ SS  VT V+SG++AL+ LGL   +  S          
Sbjct: 23  ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS---------- 82

Query: 69  HHHHQEIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINRCLEEG 128
             + ++++VNLI+TDY MP ++GYDLL+KIK S + +++PVVIMSSEN+  RI  CL+EG
Sbjct: 83  --NLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEG 142

Query: 129 AEEFLLKPVKLSDVNKLKPFICRGKAKEME----SNNLKRKEMGSAQSSERTRTKYNDHS 185
           AEEFLLKPVKL+DV ++K  I R +A+E +    SN  K +E     SS    T   D S
Sbjct: 143 AEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSDTSSSSHDDTSIKDSS 190

The following BLAST results are available for this feature:

BLAST of Lcy13g006940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4GZK7	5.4e-53	70.59	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q942A1	5.4e-53	70.59	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q4GZK2	1.5e-50	59.36	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2RAP3	1.5e-50	59.36	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B8BLZ4	1.9e-50	59.36	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of Lcy13g006940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZT5	3.8e-86	91.76	LOW QUALITY PROTEIN: two-component response regulator ORR11-like OS=Cucurbita mo...	[more]
A0A5A7SZL1	7.5e-74	89.47	Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BH64	7.5e-74	89.47	two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC1034895...	[more]
A0A0A0KV44	2.9e-73	88.24	Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1CBT9	5.0e-70	83.43	two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lcy13g006940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892701.1	7.9e-86	90.86	two-component response regulator ORR4-like [Benincasa hispida]	[more]
XP_022956694.1	7.9e-86	91.76	LOW QUALITY PROTEIN: two-component response regulator ORR11-like [Cucurbita mosc...	[more]
XP_023526911.1	8.8e-85	91.26	two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6601130.1	5.7e-84	90.71	Two-component response regulator ORR9, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_008446956.1	1.6e-73	89.47	PREDICTED: two-component response regulator ORR9-like [Cucumis melo] >KAA0034757...	[more]

BLAST of Lcy13g006940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	5.7e-50	63.13	response regulator 9	[more]
AT2G41310.1	3.7e-49	51.12	response regulator 3	[more]
AT1G74890.1	1.4e-40	49.73	response regulator 15	[more]
AT1G59940.1	2.4e-40	57.42	response regulator 3	[more]
AT1G19050.1	2.0e-39	50.00	response regulator 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 10..146 e-value: 6.0E-16 score: 69.0
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..142 e-value: 5.6E-20 score: 71.6
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 11..150 score: 33.038948
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..182 e-value: 8.2E-32 score: 113.1
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 73..174 e-value: 4.7E-7 score: 27.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..185
None	No IPR available	PANTHER	PTHR43874:SF140	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	coord: 3..182
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 3..182
None	No IPR available	CDD	cd17581	REC_typeA_ARR	coord: 12..145 e-value: 5.07522E-77 score: 224.167
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 10..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g006940.1	Lcy13g006940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity