Lcy13g006880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g006880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr13: 6203929 .. 6208931 (+)
RNA-Seq Expression	Lcy13g006880
Synteny	Lcy13g006880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGTCCTTCATACGCTCCTCCTTCTCCTCTCTCTCTCTCTCTCAGGCTTTAATTTGAATTTTCTCGGCTCCCAAACGCGTGCTTCTTCGTATCTCTCCGTGTATCATCTCTTTTTTGTGCTGTTTATTGTCGTATCACAGCCGAAGTTGCCTTATACCCGGATTTCTTTAGTGGGTTTCTGATTATCCTTTGAGGTATTTGATGTTTTGTTTGTTCTTCTTTGATTTCTTCTTTTTACATGGGGTTCGAGTTGTCATGATTTGGGGTGTTTTGCTTTATGGGTTGGTTTTATTCTTGTCTGGAGTTGGTTGAGGCCCCTTCGTTTTTGGAATGTCCTAATCTGCATTCCGTTTGTTGGTTGTCTCATTGTGACTCTGGATATTTGCTATTGTTCTACGGGCCTCAAATTTGTTGGTGGAGTTTTTCTTTTGAGTTCTGGATTTAGAAAGTTTGTTGGTATCAGAAATACAAAGTTGGATGATATGAGTTTCTTCACGGTTTAGTTTTCCTGTAATGGTTCTTGAATTGGTTTCATTGGGGTTTTAGTGCAATGTATTTGTTATTTTGTCTTTTTCATATTTAAATACCGTAAGACCATCTACACTAAATGTTCCATCCTCGTGATTCTGAACTCGGAGGTATGCCATGAAGTGATCAAGGATGATAAGAATTAAGATGTCATCCTGTTCTTAATCTTTTTCTCTTTTGGGTGTTCTGGTCTTTTGTCTAATGATGATCTTTTGGATTTGTGGGCAGAATATTGGATAATGACTTGAGATGCTTTCTTTTTCTTTTGGTGAAGCATCTTTGTGTTAGTTGATGTATATTTATTTACCAATTCGTTATTGGAGGAAACAAGCTGGTTCTCAAAAAATAATAAATAAATAAAGATTTTGCAGTGTTTCTTAAAGTTTTTTTGGTTTTCCTTTTGCATCACTTGGTTTTGATTATTGCAATTTGCGAAGTGCTAATGAAAGTAATTCTTAGCCCCTTTTTTGTGATAGTGGGTGCTTCCTTCCTTCCATAGACTGGTTTTCTGCAAGTCTTATCATTGCACATTTGGCTTGAAAAGGATAGGAGGATTTTGAAAAGTGCTTTTGAAGTTCTTTCTTGTAACTATAGTTGGTCATATTCTTTTTGGAGTCTCCTCCCCTTCTGTTCCATGTTGGCTTGCCTGTACTTTCATTCTTCTTAAAGAAAGCGATTCTTTTAGCAAGTACCTGAGGCTAGTAAGCTGTCCAAATGTGATGGAGGACTTCTTGATAATCAATGTTGGTTCTGGTGAAAGTACCTTTTTCTAGATAGATTTATGGGTTATGGCGTGTCCCTTGAGAGAAATGCGTACATGTTTAGGGGTCTAAGTACTGGAAGCCTCTGAAGCGTTATAACAAGTTGTCCTACCTAAACTGGTGAAAACACTCTTCTCTAGAAAAGATTTGTGGGTTTTGACATGTCCCTTGAGAGACGTGTGTACAAGTGTTGGGGACTCGGGCCTAAAAGCCCATAGAGCTTAGCAGAAGCCGTCCTAATCTAGGAAAACACTCTTCTCGAGAAAGATTTCTGGGTTTCGACATGTATCTCGAAAGAAGTGTATGTATATGTCAGGGCCTTGCATCTCAGTACTAAAAGCCAACTTTGTAACAAGCTGTCTGAATATGGAGGACTTCTAGATGTCAATGTTTGCTCTTGTGAAACACCCTTTTGTAGAAAGATTTATGGGTTTTGACGTGTCCCTTGATATAAATCTTATGTAGGCTTTATATATCCGGTTATAAGCTGTAGAGATGTTTGGGCAATGACTGGTTCTTGTAGATGAGAAGGAATTTGACAGATAGGGAGGTGGAAGGTTGGCTTGCTCTCTTGGATATCCTAGGAAAGAAATTCTTGCAGGGAGAGGGACTTGTTGAAAGGGAATCCTTGTTTCTTGGGTAATTGTTCTTTTAGCTCTTTCAATCTTTTGAACCCCCCACCCCCATTTTCTCTCCAAATGTGGAAGGCGAAGTGCCCTTTTATATGCACCCTAGTGTTGTTGAAATATCTAAGCTCCACCACAAGAATTCATAAGAGAAAACCAGGGATTTGTCTTTTGTCCCACCAGTTTTCACTAAGCTATTTAAAATCCGGGGATGTGGACCATTTTTCAGTTTTAGGTTTTGCAGCTAATTGTTCATTGCTGTCTTCCCTGGTGTTTCTCTATGATGTTCAAATCCTAGAAAGTTTTGTAAGTACCGTTTTATGGTGGCAAACTAGAGAGCTTTCTTGTAATCTTTATTTTCCTTTTAAATGGTCCAAATTCGCCTGGTCCCCTCTTATTTTGTAACTTCTTTTCTTCGTAGTAGAAGAGTTTCTTATCCTAGAAAAGGTATTTTGATGAAGGAGCAATGTTTCGCCTTGTTACCACTCTGAATACTTGTTTTTCTGGGGTAGAGCTATCAATTGACAAAATATGTTCTTAATACTTGCAAGTTTTTGTTCATACTTTTCCTAACTTGTGTTTGTGTATGTAGGCATTCTATTGATAAAAATGTCATCTGCAAATCCATATTTTGATGACATTCGGACCAAACCCGAGGTTATTGATCCTCCTCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGAACCTGCTCGAAATGGAGGAAAACCTAATGCAGCTGTCTCTAGCAGCGTCCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGGTCTGTTTCTTATCTTTTTACCTTTTGAATGAAATTGTTTACTTGTAGGAGAGGGCCTGGGTGAAGTTGGTGGTGTCAACTGTCAATGATGGAGTTGGTGGTAATGTTAGTTATAGCAAAGGTTTTGGTGGTGGGTTTGGAAGATTTAGGTTTTGGAGGTGGATTTGGTGCTCGGGTGGAGGCGGAAATTGGCACCCCTAAACTTTGAAAATTCTCATACACTTTGTTATTATTACCACATGAAACTAGTCTCATGGTCATGCAAAAGATTACATAAATATCTGTCAAGAGCAAACAAAACAAAACAAAAGCAGAGTGGAAGATGAGAAATCAACCTACTCTAAAGCTCCAATTGACTTGAATTAAAACAATTGTATTATTACAACATTAATTGGATACCAATACCAAATAAGCAATATAATCCTAAATCTCCTCAAAACTCCTAAACTCTCTTCAAAGATCCTATGAACCTTGATTTTTCTTTCATTCCACAGGTCACATAGAATTCCTCTAATCTAATTTGTCCACACGATATTGGCCTTTGTCTTAAAGGCGTCTGAGGATGGCACCAATGTAGGGCAAACATATTCAGCAGTTTAAACCAACAACTAGAAGCCATGCCATACCTTGGAGATGGATGATTTTGGCTCTTGTTCCTACACAAAATACACCAGTTTGGATTAATATGGCAGGTTGGGTGTCTCTTCTAGGTTGATATCTGCAGTATTATAATCACCTAAAATCAAAGTCCAAATCAAAATATCTTTCTTTCTTAGGATACTTCTGCTTTGCATCGATGTAGTCGTCAGCTCCTTACCCAGAATCTTCATTTTGGCAGTTAAAAAACAGAACAACTTACTCTGTTTATGCAAAACTAATTTGGATTTAGAGTGCTGTTCTCCGTTTTGACCTCAGTTGGTTGTTCTCCTTGGGTTTACGATTGATGATGTTAAAGTTCTGAATTTTCTTCCATATTGAGAATACCACTTCTTTATGCCATATATGACAATAATTTGTTATCTTATATCCTTATGTCAATAAACCTTCTATCGTTGCAGTGTTCGAATGGTCACACGTTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCCACCTGCAGGCATGAACTTGGCAATATTAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATATCAAACTTTTGGATGTGTGGGCATATACCCATACTATAGCAAACTGAAACACGAATCTCAATGTGCCTATCGACCCTATAACTGTCCATATGCGGGGTCGGAATGCACGGTTATTGGCGATATTCCATTTTTGGTAGCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGGAGCACTTTCAATCATCGATATGTTAAGTCAAATCCACAAGAGGTCGAAAATGCTACCTGGATGTTAACGGTACTATTCTGCTTCGTCTTATCTTTTCATGTTTGGGTTATTGGCCTGTCGAATCTTCTTCAACATATAGTCAAATGAAGGTTTAATTATCAAGAATGAGTGTATAAGATAGAAGAGGCTAATGCGTTGAGATTAGGACAGACTGATAGTGGCATGTCCTCTTTTATTAGGTAGGGGTCAAGTTCATAGCTTTGCTCTCATTTCCACGTATACGTTGCGAAATTTATGTCGGATATGTGACTGATACTGTTCTTCGGTTTTACTTCTAGGTTTTCAGTTGCTTCGGTCAGTACTTTTGTTTACACTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTACATAGCATTCTTGCGGTTTATGGGTGATGACAATGAGGCGAAGAACTACAGTTATAGTCTTGAGGTTGGTGGGAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTTATTATCCAACGTAACATGGCGCTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAACTGTGTATTTTTAATCACTTTCTGTCCTATGTTTAGCTTCTTAGAAAGTAGGCTAATTAGAGATATGATATAATAGATGTTCAATCATGTAATGTAGTTATTTTATTTTTAGTTTTAACATTGAAAGGCAAGGTCTCTTTGCTTGTGGGAATCATCAAATACATGAACTGGAAAACCTGTGTTCTTTGTTCACT

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGTCCTTCATACGCTCCTCCTTCTCCTCTCTCTCTCTCTCTCAGGCTTTAATTTGAATTTTCTCGGCTCCCAAACGCGTGCTTCTTCGTATCTCTCCGTGTATCATCTCTTTTTTGTGCTGTTTATTGTCGTATCACAGCCGAAGTTGCCTTATACCCGGATTTCTTTAGTGGGTTTCTGATTATCCTTTGAGGCATTCTATTGATAAAAATGTCATCTGCAAATCCATATTTTGATGACATTCGGACCAAACCCGAGGTTATTGATCCTCCTCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGAACCTGCTCGAAATGGAGGAAAACCTAATGCAGCTGTCTCTAGCAGCGTCCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACGTTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCCACCTGCAGGCATGAACTTGGCAATATTAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATATCAAACTTTTGGATGTGTGGGCATATACCCATACTATAGCAAACTGAAACACGAATCTCAATGTGCCTATCGACCCTATAACTGTCCATATGCGGGGTCGGAATGCACGGTTATTGGCGATATTCCATTTTTGGTAGCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGGAGCACTTTCAATCATCGATATGTTAAGTCAAATCCACAAGAGGTCGAAAATGCTACCTGGATGTTAACGGTTTTCAGTTGCTTCGGTCAGTACTTTTGTTTACACTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTACATAGCATTCTTGCGGTTTATGGGTGATGACAATGAGGCGAAGAACTACAGTTATAGTCTTGAGGTTGGTGGGAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTTATTATCCAACGTAACATGGCGCTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAACTGTGTATTTTTAATCACTTTCTGTCCTATGTTTAGCTTCTTAGAAAGTAGGCTAATTAGAGATATGATATAATAGATGTTCAATCATGTAATGTAGTTATTTTATTTTTAGTTTTAACATTGAAAGGCAAGGTCTCTTTGCTTGTGGGAATCATCAAATACATGAACTGGAAAACCTGTGTTCTTTGTTCACT

Coding sequence (CDS)

ATGTCATCTGCAAATCCATATTTTGATGACATTCGGACCAAACCCGAGGTTATTGATCCTCCTCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGAACCTGCTCGAAATGGAGGAAAACCTAATGCAGCTGTCTCTAGCAGCGTCCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACGTTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCCACCTGCAGGCATGAACTTGGCAATATTAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATATCAAACTTTTGGATGTGTGGGCATATACCCATACTATAGCAAACTGAAACACGAATCTCAATGTGCCTATCGACCCTATAACTGTCCATATGCGGGGTCGGAATGCACGGTTATTGGCGATATTCCATTTTTGGTAGCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGGAGCACTTTCAATCATCGATATGTTAAGTCAAATCCACAAGAGGTCGAAAATGCTACCTGGATGTTAACGGTTTTCAGTTGCTTCGGTCAGTACTTTTGTTTACACTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTACATAGCATTCTTGCGGTTTATGGGTGATGACAATGAGGCGAAGAACTACAGTTATAGTCTTGAGGTTGGTGGGAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTTATTATCCAACGTAACATGGCGCTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAA

Protein sequence

MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ

Homology

[Close]

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.0e-157
Identity = 260/299 (86.96%), Postives = 274/299 (91.64%), Query Frame = 0


Query: 7   YFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVCLNAMYP 66
           Y DD  +  EVIDPP+  +++DV+E   +P  +  KPN  VSSSVRELLECPVCL+AMYP
Sbjct: 6   YIDD--SGSEVIDPPK-TEVLDVTELAGDPVPHSPKPNVVVSSSVRELLECPVCLSAMYP 65

Query: 67  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 126
           PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQ FGCVGIY
Sbjct: 66  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCVGIY 125

Query: 127 PYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKS 186
           PYY KLKHESQC YRPY+CPYAGSECTV GDIP+LV HLKDDHKVDMHNG TFNHRYVKS
Sbjct: 126 PYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYVKS 185

Query: 187 NPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVG 246
           NP EVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDD EAKNYSYSLEVG
Sbjct: 186 NPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDLEAKNYSYSLEVG 245

Query: 247 GNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
           G GRKM+WQGVPRSIRDSHRKVRDS+DGLIIQRNMALFFSGG+RKELKLRVTGRIWKEQ
Sbjct: 246 GTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 301

[Close]

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot
Match: Q8S3N1 (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 486.9 bits (1252), Expect = 1.7e-136
Identity = 224/289 (77.51%), Postives = 247/289 (85.47%), Query Frame = 0


Query: 18  IDPPQDDDMMDVSESVSEPARNGGKPNA-AVSSSVRELLECPVCLNAMYPPIHQCSNGHT 77
           ID   DDD +      S     GG     + ++SV ELLECPVC N+MYPPIHQC NGHT
Sbjct: 6   IDSVIDDDEIHQKHQFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNGHT 65

Query: 78  LCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHES 137
           LCS CK RVHNRCPTCR ELG+IRCLALEKVA SLELPCKY   GC+GI+PYYSKLKHES
Sbjct: 66  LCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHES 125

Query: 138 QCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATW 197
           QC +RPY+CPYAGSEC  +GDI FLVAHL+DDHKVDMH G TFNHRYVKSNP+EVENATW
Sbjct: 126 QCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATW 185

Query: 198 MLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQG 257
           MLTVF CFGQYFCLHFEAFQLGMAPVY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G
Sbjct: 186 MLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEG 245

Query: 258 VPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
            PRS+RDSHRKVRDS DGLIIQRNMALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 246 TPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.4e-135
Identity = 216/258 (83.72%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 48  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 107
           ++SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 54  TTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 113

Query: 108 AASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKD 167
           A SLELPCK+ + GC  I+PYYSKLKHE+ C +RPY+CPYAGSEC+V GDIPFLVAHL+D
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173

Query: 168 DHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFL 227
           DHKVDMH+G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFL
Sbjct: 174 DHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 233

Query: 228 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 287
           RFMGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 234 RFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSG 293

Query: 288 GDRKELKLRVTGRIWKEQ 306
           GDRKELKLRVTGRIWKEQ
Sbjct: 294 GDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.3e-133
Identity = 216/265 (81.51%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 41  GKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           G    A ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IR
Sbjct: 48  GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107

Query: 101 CLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPF 160
           CLALEKVA SLELPCK+   GC  I+PYYSKLKHES C +RPY+CPYAGSEC ++GDIPF
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167

Query: 161 LVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMA 220
           LVAHL+DDHKVDMH GSTFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGM 
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRN
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           MALFFSGGDRKELKLRVTG+IWKEQ
Sbjct: 288 MALFFSGGDRKELKLRVTGKIWKEQ 312

[Close]

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.9e-130
Identity = 210/265 (79.25%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 41  GKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           GK     ++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPTCR+ELGNIR
Sbjct: 44  GKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIR 103

Query: 101 CLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPF 160
           CLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSEC+V GDIP 
Sbjct: 104 CLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPT 163

Query: 161 LVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMA 220
           LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMA
Sbjct: 164 LVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMA 223

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS DGLII RN
Sbjct: 224 PVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRN 283

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           +AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 284 LALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL
Match: A0A6J1GX87 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458334 PE=3 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.0e-180
Identity = 298/305 (97.70%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN AVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY TF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYLTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL
Match: A0A6J1JUK6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488500 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 5.8e-180
Identity = 297/305 (97.38%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN  VSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVVVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGD KELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDGKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL
Match: A0A6J1G1E2 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111449792 PE=3 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 3.7e-179
Identity = 295/305 (96.72%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQD+DMMDVSESVS+P RNGGKPN AVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GC GIYPYYSKLKHESQCAYRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL
Match: A0A6J1G1D3 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111449792 PE=3 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 3.7e-179
Identity = 295/305 (96.72%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQD+DMMDVSESVS+P RNGGKPN AVSSSVRELLECPVC
Sbjct: 12  MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 71

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 72  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 131

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GC GIYPYYSKLKHESQCAYRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMH+GSTFN
Sbjct: 132 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 191

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 192 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 251

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 252 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 311

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 312 IWKEQ 316

[Close]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL
Match: A0A6J1CC14 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111010271 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.2e-178
Identity = 293/305 (96.07%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDDIR+KPEVIDPP +DDMMDVSESVS+P+RNGGKPN AVSSSVR+LLECPVC
Sbjct: 1   MSSANPYFDDIRSKPEVIDPPPNDDMMDVSESVSDPSRNGGKPNVAVSSSVRDLLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQ+F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLV HLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVTHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRD HRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDGHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. NCBI nr
Match: XP_038891242.1 (E3 ubiquitin-protein ligase DIS1 [Benincasa hispida] >XP_038891243.1 E3 ubiquitin-protein ligase DIS1 [Benincasa hispida])

HSP 1 Score: 645.6 bits (1664), Expect = 2.2e-181
Identity = 301/305 (98.69%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN AVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCAGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. NCBI nr
Match: XP_023524871.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo] >XP_023524879.1 E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644.0 bits (1660), Expect = 6.3e-181
Identity = 299/305 (98.03%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN AVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. NCBI nr
Match: KAG7031934.1 (E3 ubiquitin-protein ligase SINAT5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 642.9 bits (1657), Expect = 1.4e-180
Identity = 298/305 (97.70%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN AVSSSVR+LLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRDLLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. NCBI nr
Match: XP_022956691.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata] >XP_022956692.1 E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata])

HSP 1 Score: 641.3 bits (1653), Expect = 4.1e-180
Identity = 298/305 (97.70%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN AVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY TF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYLTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. NCBI nr
Match: XP_022992030.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita maxima])

HSP 1 Score: 639.8 bits (1649), Expect = 1.2e-179
Identity = 297/305 (97.38%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MSSANPYFDDIRTKPEVIDPPQDDDMMDVSESVSEPARNGGKPNAAVSSSVRELLECPVC 60
           MSSANPYFDD+RTKPEVIDPPQDDDMMDVSESVS+PARNGGKPN  VSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVVVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIPFLVAHLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGD KELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDGKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of Lcy13g006880 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-136
Identity = 216/258 (83.72%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 48  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 107
           ++SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 54  TTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 113

Query: 108 AASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFLVAHLKD 167
           A SLELPCK+ + GC  I+PYYSKLKHE+ C +RPY+CPYAGSEC+V GDIPFLVAHL+D
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173

Query: 168 DHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFL 227
           DHKVDMH+G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFL
Sbjct: 174 DHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 233

Query: 228 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 287
           RFMGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 234 RFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSG 293

Query: 288 GDRKELKLRVTGRIWKEQ 306
           GDRKELKLRVTGRIWKEQ
Sbjct: 294 GDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Lcy13g006880 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 476.5 bits (1225), Expect = 1.6e-134
Identity = 216/265 (81.51%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 41  GKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           G    A ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IR
Sbjct: 48  GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107

Query: 101 CLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPF 160
           CLALEKVA SLELPCK+   GC  I+PYYSKLKHES C +RPY+CPYAGSEC ++GDIPF
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167

Query: 161 LVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMA 220
           LVAHL+DDHKVDMH GSTFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGM 
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRN
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           MALFFSGGDRKELKLRVTG+IWKEQ
Sbjct: 288 MALFFSGGDRKELKLRVTGKIWKEQ 312

[Close]

BLAST of Lcy13g006880 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 )

HSP 1 Score: 464.9 bits (1195), Expect = 4.9e-131
Identity = 210/265 (79.25%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 41  GKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           GK     ++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPTCR+ELGNIR
Sbjct: 44  GKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIR 103

Query: 101 CLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPF 160
           CLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSEC+V GDIP 
Sbjct: 104 CLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPT 163

Query: 161 LVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMA 220
           LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMA
Sbjct: 164 LVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMA 223

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS DGLII RN
Sbjct: 224 PVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRN 283

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           +AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 284 LALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of Lcy13g006880 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 457.6 bits (1176), Expect = 7.8e-129
Identity = 211/279 (75.63%), Postives = 239/279 (85.66%), Query Frame = 0


Query: 31  ESVSEPARNG----GKPNAAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVH 90
           E+ S+P ++G    GK ++  S+ V ELLECPVC N MYPPIHQC NGHTLCS CK RV 
Sbjct: 29  EANSKPTKSGSGSIGKFHS--SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQ 88

Query: 91  NRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCP 150
           N CPTCR+ELGNIRCLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +R Y+CP
Sbjct: 89  NTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCP 148

Query: 151 YAGSECTVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQ 210
           YAGSEC+V GDIP LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+
Sbjct: 149 YAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGR 208

Query: 211 YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHR 270
            FCLHFEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG + RK+ WQG+PRSIRDSHR
Sbjct: 209 QFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHR 268

Query: 271 KVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
           KVRDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+
Sbjct: 269 KVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of Lcy13g006880 vs. TAIR 10
Match: AT5G53360.1 (TRAF-like superfamily protein )

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-106
Identity = 171/204 (83.82%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 102 LALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCAYRPYNCPYAGSECTVIGDIPFL 161
           +ALEKVA SLELPCKY   GC+GI+PYYSKLKHESQC +RPY+CPYAGSEC  +GDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 162 VAHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAP 221
           VAHL+DDHKVDMH G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 222 VYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNM 281
           VY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G PRS+RDSHRKVRDS DGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 282 ALFFSGGDRKELKLRVTGRIWKEQ 306
           ALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

The following BLAST results are available for this feature:

BLAST of Lcy13g006880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10L91	3.0e-157	86.96	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]
Q8S3N1	1.7e-136	77.51	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=...	[more]
Q84JL3	2.4e-135	83.72	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
Q9STN8	2.3e-133	81.51	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]
Q9M2P4	6.9e-130	79.25	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]

BLAST of Lcy13g006880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GX87	2.0e-180	97.70	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458334...	[more]
A0A6J1JUK6	5.8e-180	97.38	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488500 P...	[more]
A0A6J1G1E2	3.7e-179	96.72	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111449792...	[more]
A0A6J1G1D3	3.7e-179	96.72	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111449792...	[more]
A0A6J1CC14	3.2e-178	96.07	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101027...	[more]

BLAST of Lcy13g006880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891242.1	2.2e-181	98.69	E3 ubiquitin-protein ligase DIS1 [Benincasa hispida] >XP_038891243.1 E3 ubiquiti...	[more]
XP_023524871.1	6.3e-181	98.03	E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo] >XP_023524879.1 E3...	[more]
KAG7031934.1	1.4e-180	97.70	E3 ubiquitin-protein ligase SINAT5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956691.1	4.1e-180	97.70	E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata] >XP_022956692.1 E3 ubiquit...	[more]
XP_022992030.1	1.2e-179	97.38	E3 ubiquitin-protein ligase DIS1 [Cucurbita maxima]	[more]

BLAST of Lcy13g006880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61790.1	1.7e-136	83.72	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	1.6e-134	81.51	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	4.9e-131	79.25	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	7.8e-129	75.63	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	1.9e-106	83.82	TRAF-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 166..298 e-value: 4.2E-39 score: 135.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 110..165 e-value: 9.1E-16 score: 59.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 19..109 e-value: 2.3E-9 score: 38.8
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 99..298 e-value: 5.0E-80 score: 268.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 7..305
None	No IPR available	PANTHER	PTHR10315:SF77	E3 UBIQUITIN-PROTEIN LIGASE DIS1	coord: 7..305
None	No IPR available	CDD	cd03829	Sina	coord: 171..299 e-value: 8.53388E-65 score: 197.994
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 55..93 e-value: 4.25962E-15 score: 66.1542
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 110..302
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 48..99
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 57..93 score: 9.346889
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 110..170 score: 13.886871

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g006880.1	Lcy13g006880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding