Lcy13g006290 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g006290
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionVacuolar acid trehalase
LocationChr13: 5577608 .. 5581476 (+)
RNA-Seq ExpressionLcy13g006290
SyntenyLcy13g006290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACCGCAGAAGAAAGTAGTTAACAAACAGCCGATGACGTTGGGGATAAGATAGAAACCAGAGAGCTCCAATGGCTTCTATTCTAATCCCTTCTCCATATCGATTTTTGAACTCTCGCGCGCTCGCTAGCGCCTTCTTCCCTATCATCAATGGCGCGCCTTCTCAACTCTCAGCAGCACCCATTTCTTCTACCAGTAATCTCCTCAAATTTAAGCTCAAACAACCTCCCAGAGCATCTTCTGAAGGTACGCTCACCCTTCTCAGTATCGGGAAGAATCATCACTCTCTTTCACTTCGGCGATGCTCAAATTTGAACTTATGGAACTGGGTTTCGAGTTATTGTCCACACTAAAACGTTATTCTCAGTGATATCGATCTTAGATTACTGTTAATCTTCGCAATTCTTGCTGCTTCGAAGTAGTTGCTCACGGAGATAATAGAAATGGTGTAGAATTTGAAGAAAAAAGTAGAAATAGAAAGTGCTTCGTGGTTCGATTATCGAATTGGGCATTCTGAGAATTCCTTGCTGCATAATAGTTGTAGCACAACATCACTTCTTATAATTATTTATTATTATTTTTTTATGGCATAATCTGTTGCATTCCTACAGGAGCTCCTAATGAATTAATCGAGGATTCAAAGTTTGTTCCCTTGAATGCTGAAGATCCCAGATATGGTCCACCTGTAAGTTCTGGTTAGTTTCTTTCAGTACAATTTTTTAGGATGTTTTTATTTAAGTGTTCTTCTTTCGAAGGGGACATGATATGTCTTTTGTTGCGTCTTTTCAGTGAATTTCATCGATTGTTTATGTTTGTTTATTGTCTAAGAATACGAATTGAACTTAAATTGAGCACCTGAACTTCATATTTATTGTACTATTTATATTAGTCTCACCAACTCATTCTTCTAAATTTTCATTTCTTTGTTTGTCTTATAGGTTAAGTGTTCTTTTATGATTTCTCTTGGAATATGAACTTATGTCTTTAGAACATTTCCTTTCCTCTTTTTCTTTAAAGGGATTTTAGTAGGGTAGAGCAGGTTAAAATTTAGATTGTTCATTATTACAGGCATTGCTGTTGCTGGGCTTTGAATTGGAGGAGGCAGTGAAGGTAAGTTTTAAGTGTTTTTTCCCCTGCAATCTAACACTTGCAAATTAAAAAGGAAGTTAAAAATACGTTGCCTGTGATCCTAGTAGAAATTGAATGCAATTGGTGAAGTATAGACTTTTTACTCTTTCGAGGGATGGTGAAACTAGTTATGGAGGCGATTCTGCAACTTTTTTGTTTTTGTTTTGTTTAGCTTACTTACAGACTACAACGACATTTGCTGGTTGATTCTTTTCAAGGTCAATTTTAGTTGGATGGATTGGTTGAAGTTTAATAGGTTTATTATTTATAAATACTTATTTTCTTTCTTTGTCTGAGCTTAACAATATTTTCTGATAAATACCGAGAAATTTCGTTAGAAGTTCTGGTATTCAGTCTGACGCTCAAACAGCCTAGTGGGCACCTCAAAACTCCTAGTCTTCTTGCACATCCTTAGCTTTGGAAACTGTTTCCTAACTCAATAATTTTTTTTGCTTACATTGATTAATGATTACAGATTCAAGATCTTTTGAAAGATTTGGACGGTGAATTCATGCAGGTAGTTCATTTCCGTGTTCATGTTCTTTTAGGTAAGATGGGAGGGCGATGTTGCTAAGAATAGTAGTAGAATATATAATATCAGCATCTCTGTTCAGTGTATTGAAAAATTAATTGTGGAAAATTTAGAGGTTCTGGCATGCCATGGGACATGGGTTGATGTCCTACATATTGCATGAAAAATCATACCCTACCAACACAAAGGTACCAAACTACCTACATCAATAAATCTGCCGAACAGTTTTTTTTTTTTATTGTAGGTTATTCTTTGTACTGAAGATATGATTACTCGATCCCTGTGGGAAGCGGTGCATACAAACCAACCAGTTTTGGCAAAAGTGAAGGTTATGTTCTGAATTTCCTTGAATTTTACATGTTTAGTTTACTATGTGCCTCCAAAATTGTGTTCGCATAAAGAAGGTGACTTTTGATTTAGGAAAACCTATTTTCTTGACACCCTTGCTAACTCGAGTCTGCAATCAGATATTTTCCTTTTCTAGCTTTTAATTATACTGAATCATGTTTCTTCAGCTTTGTTGTTCTCTTTTGTTTATCGGGAGGAGTGGGATTTCAGCAACAATCTCAATGTTCTATTGTAATTTATTAAGGAATAATAAATATGCGTATAACATAGCCTGACATGCTGATGAGTGATGATCATGTCACTGAAGTGATGGAACGACTTAACCCTTGTTGGGATTGCGACCAAAGTCCCACATTGGTTAGAAAAGGGGAAGATCATGGGTATATAAGTAAAAGACTTTAAGAGACAACATCTTCATGCAGTGAAACAAAAAACAAAACTGCCATGAGGGCTAAGTTGTGTTTAACAAATATTTGATGTACTATGAAAGATAGGATAAAAATTAGAAGCGGTATGTCATGGTACTCAATCTAATGTATATTATTTCTGCAGATAGCCAAATCATTGCCACGAATCTGCTTCTTATCCGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGTATTGAAAGAACTCCCTCTTCATTTCTCATTTTATCGAGAAGTTAGTGTCTTCTAAAATCCGAATGTACATTTGAATTTTTTGTAATTTCCTTTGCCTCTCCATATTGTCATTCTGCAAACAGAATGGGTTGAATATCATTGAATAATCATCAATAATAATGTTATGATCGCGGACACCGCAACTTGAGAAGGCAGATGAAATCTCTCTCTCTCTCCCCCAGAAGTGGAAGAGTCATCTCATGTATTAGTTAGAACTTAGGAGTCTTTCTTGTACAGCATACTCCAACCAGTCCATTTTCTTTTGGTGCAGGTCTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGCTGCTAATAAACCAGTAGAAGAGTTAATAGAAGAGATCATGGGGGACCATGAAGCACTGGTAAGAGAACTTAGATTTCTCCTTTTGTTTTCTTCTTGCTCTTTGGCATAATTCCCATTCCGGGATGAGTTGGGAGAGGAATTCCTTATTCTTACATCGATGAGCCCTAACCCTTTAAGCTCACACCTAATCAATGAAAAGTTACGAGTCTACGACACAAATCATGGTAGAGTGAGTATTACACCACTAATGCATTGACACGAGGATGATTTTTCTAGTTGGCTTTATTGATATAGCTTAGATAGGAAAAAGATACGAGAAGGTAGAGGTTAACTTTGAAATCCAGGGGCTTTGTTCCTTAAACTCCCTTGATTGCATAGGTTTGATTGATTTTCAGTACCTACAAAATTGGATTGGTTCAAGTCGGTTCAATTTTATAGATCTGTTGACCAATTTTACCTGTATGGTTTTCCATTTTATGAAACTGATGTAGAAAATCCTACCAAATTTGTTTTGAGTTGGATTGAATTGATAATTTTTCTTCATCAATATGATTATATTTTGAATGCACCCACCATTGAGACACCTCATATATTCTTTGCAGACTGGTGCTACATCAGAAAGGTCATAGGCAAGCCTCCAAGTTGAGAACTGGAGATTTGGAGAAATCCACAGTTATAATATGATTTCTCAAACACTTCCCTCCCCCTTTGATATTTCATTTTATTTTGTTTTTTCTTTTTACAATAATTGTTCCTCTTGTTGCGTTAGGTCCAATCTGGATTTGTCTTACATTTTATTCAACTCTGTATGGTCTTATATCATATGTATGTGATGAACATTATTTAATGGCTAATGTTAAACAAAT

mRNA sequence

ATGCCGACCGCAGAAGAAAGTAGTTAACAAACAGCCGATGACGTTGGGGATAAGATAGAAACCAGAGAGCTCCAATGGCTTCTATTCTAATCCCTTCTCCATATCGATTTTTGAACTCTCGCGCGCTCGCTAGCGCCTTCTTCCCTATCATCAATGGCGCGCCTTCTCAACTCTCAGCAGCACCCATTTCTTCTACCAGTAATCTCCTCAAATTTAAGCTCAAACAACCTCCCAGAGCATCTTCTGAAGGAGCTCCTAATGAATTAATCGAGGATTCAAAGTTTGTTCCCTTGAATGCTGAAGATCCCAGATATGGTCCACCTGCATTGCTGTTGCTGGGCTTTGAATTGGAGGAGGCAGTGAAGATTCAAGATCTTTTGAAAGATTTGGACGGTGAATTCATGCAGGTTATTCTTTGTACTGAAGATATGATTACTCGATCCCTGTGGGAAGCGGTGCATACAAACCAACCAGTTTTGGCAAAAGTGAAGATAGCCAAATCATTGCCACGAATCTGCTTCTTATCCGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGTCTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGCTGCTAATAAACCAGTAGAAGAGTTAATAGAAGAGATCATGGGGGACCATGAAGCACTGGTAAGAGAACTTAGATTTCTCCTTTTGTTTTCTTCTTGCTCTTTGGCATAATTCCCATTCCGGGATGAGTTGGGAGAGGAATTCCTTATTCTTACATCGATGAGCCCTAACCCTTTAAGCTCACACCTAATCAATGAAAAGTTACGAGTCTACGACACAAATCATGGTAGAGTGAGTATTACACCACTAATGCATTGACACGAGGATGATTTTTCTAGTTGGCTTTATTGATATAGCTTAGATAGGAAAAAGATACGAGAAGGTAGAGGTTAACTTTGAAATCCAGGGGCTTTGTTCCTTAAACTCCCTTGATTGCATAGGTTTGATTGATTTTCAGTACCTACAAAATTGGATTGGTTCAAGTCGGTTCAATTTTATAGATCTGTTGACCAATTTTACCTGTATGGTTTTCCATTTTATGAAACTGATGTAGAAAATCCTACCAAATTTGTTTTGAGTTGGATTGAATTGATAATTTTTCTTCATCAATATGATTATATTTTGAATGCACCCACCATTGAGACACCTCATATATTCTTTGCAGACTGGTGCTACATCAGAAAGGTCATAGGCAAGCCTCCAAGTTGAGAACTGGAGATTTGGAGAAATCCACAGTTATAATATGATTTCTCAAACACTTCCCTCCCCCTTTGATATTTCATTTTATTTTGTTTTTTCTTTTTACAATAATTGTTCCTCTTGTTGCGTTAGGTCCAATCTGGATTTGTCTTACATTTTATTCAACTCTGTATGGTCTTATATCATATGTATGTGATGAACATTATTTAATGGCTAATGTTAAACAAAT

Coding sequence (CDS)

ATGGCTTCTATTCTAATCCCTTCTCCATATCGATTTTTGAACTCTCGCGCGCTCGCTAGCGCCTTCTTCCCTATCATCAATGGCGCGCCTTCTCAACTCTCAGCAGCACCCATTTCTTCTACCAGTAATCTCCTCAAATTTAAGCTCAAACAACCTCCCAGAGCATCTTCTGAAGGAGCTCCTAATGAATTAATCGAGGATTCAAAGTTTGTTCCCTTGAATGCTGAAGATCCCAGATATGGTCCACCTGCATTGCTGTTGCTGGGCTTTGAATTGGAGGAGGCAGTGAAGATTCAAGATCTTTTGAAAGATTTGGACGGTGAATTCATGCAGGTTATTCTTTGTACTGAAGATATGATTACTCGATCCCTGTGGGAAGCGGTGCATACAAACCAACCAGTTTTGGCAAAAGTGAAGATAGCCAAATCATTGCCACGAATCTGCTTCTTATCCGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGTCTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGCTGCTAATAAACCAGTAGAAGAGTTAATAGAAGAGATCATGGGGGACCATGAAGCACTGGTAAGAGAACTTAGATTTCTCCTTTTGTTTTCTTCTTGCTCTTTGGCATAA

Protein sequence

MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGAPNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMITRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVPNAANKPVEELIEEIMGDHEALVRELRFLLLFSSCSLA
Homology
[Close]
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match: A0A6J1GXF1 (uncharacterized protein LOC111458403 OS=Cucurbita moschata OX=3662 GN=LOC111458403 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.5e-86
Identity = 171/201 (85.07%), Postives = 180/201 (89.55%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSRAL S FF  I GAPS++ +  +SS SN LK KL++  RASSEGA
Sbjct: 1   MASSLTFSPYPFLNSRALPSTFFHFIIGAPSRIPSLSVSSISNPLKLKLRRTLRASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNELIEDSKFVPLNA+DP YGPPALLLLGFELE+AVKIQ+LLK LDGEFMQVILCTEDMI
Sbjct: 61  PNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQVILCTEDMI 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           TRSLWEAVHTNQP LAKVKIAKSLPRICFLSGLSGEE MMFIDAFPETGLEPAVFAALVP
Sbjct: 121 TRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEAL
Sbjct: 181 NAANKPVEELIEEIMGDHEAL 201

[Close]
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match: A0A6J1JNY6 (uncharacterized protein LOC111487032 OS=Cucurbita maxima OX=3661 GN=LOC111487032 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.0e-85
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSRAL S FF  I G+PS++S   +SS SN LK KL++  RASSEGA
Sbjct: 1   MASSLTFSPYAFLNSRALPSTFFHFIIGSPSRISPLSVSSISNPLKLKLRRTLRASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNELIEDSKFVPLNA+DP YGPPALLLLGFELE+AVKIQ+LLK LDGEFMQVILCTEDM 
Sbjct: 61  PNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQVILCTEDMF 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
            RSLWEAVHTNQP LAKVKIAKSLPRICFLSGLSGEE MMFIDAFPETGLEPAVFAALVP
Sbjct: 121 NRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEEL+EEIMGDHEAL
Sbjct: 181 NAANKPVEELVEEIMGDHEAL 201

[Close]
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match: A0A0A0KRH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622600 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84
Identity = 165/201 (82.09%), Postives = 181/201 (90.05%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSR L ++ F  INGA S++S    SST N LK K+++  +ASSEGA
Sbjct: 1   MASSLTFSPYPFLNSRTLRTSLFHFINGASSKISPLSASSTCNPLKLKVRRTFKASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
            NEL+ED+KFVPLNA+DPRYGPPALLLLGFEL+EAVKIQ+LLKDLDGEFMQVILCTEDMI
Sbjct: 61  SNELMEDAKFVPLNADDPRYGPPALLLLGFELDEAVKIQELLKDLDGEFMQVILCTEDMI 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           TRSLWEAVHTNQPVLAKVKIA+SLPRICFLSGLSG+EMMMFIDAFPETGLEPAVFAALVP
Sbjct: 121 TRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGDEMMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEA+
Sbjct: 181 NAANKPVEELIEEIMGDHEAM 201

[Close]
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match: A0A6J1CBE2 (uncharacterized protein LOC111009971 OS=Momordica charantia OX=3673 GN=LOC111009971 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.7e-83
Identity = 167/203 (82.27%), Postives = 178/203 (87.68%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRAL--ASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSE 60
           MAS L  SP R LNSRAL  AS  F  IN APSQ+SA  +SS SN LKFKLKQP RASSE
Sbjct: 1   MASPLSFSPRRLLNSRALAIASTHFHAINVAPSQISAPSVSSVSNPLKFKLKQPLRASSE 60

Query: 61  GAPNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTED 120
           GAPNEL+EDSKFVPLNA+DPRYGPPALLLLGFELEEA+KIQ+LLKDL GEFMQVILCTED
Sbjct: 61  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVILCTED 120

Query: 121 MITRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAAL 180
           MI RSLW+AVHT+QPVLA VKIA+SLPRICFLSGLSGEEMMMFID FPETGLEPAV+AAL
Sbjct: 121 MIARSLWDAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVYAAL 180

Query: 181 VPNAANKPVEELIEEIMGDHEAL 202
           VPN ANKPV ELI EIMGDHE +
Sbjct: 181 VPNGANKPVGELIAEIMGDHEMM 203

[Close]
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match: A0A5A7SZ69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002460 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 163/201 (81.09%), Postives = 176/201 (87.56%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSR L +  F  INGA S++     SST N  K KL++  +ASSEGA
Sbjct: 1   MASSLTFSPYPFLNSRTLRTTLFHFINGASSKIPPLSASSTCNPFKLKLRRASKASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
            NELIED+KFV LNA+DPRYGPPALLLLGFEL+E VKIQ+LLKDLDGEFM+VILCTEDMI
Sbjct: 61  SNELIEDTKFVHLNADDPRYGPPALLLLGFELDEVVKIQELLKDLDGEFMRVILCTEDMI 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           TRSLWEAVHTNQPVLAKVKIA+SLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP
Sbjct: 121 TRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEA+
Sbjct: 181 NAANKPVEELIEEIMGDHEAM 201

[Close]
BLAST of Lcy13g006290 vs. NCBI nr
Match: XP_038891527.1 (uncharacterized protein LOC120080918 isoform X2 [Benincasa hispida])

HSP 1 Score: 335.1 bits (858), Expect = 4.5e-88
Identity = 172/201 (85.57%), Postives = 183/201 (91.04%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           +AS L  SPY  LNSRAL   FF  INGAPS++S   +SSTSN LK KL++  R SSEGA
Sbjct: 3   LASSLTFSPYPLLNSRALPPTFFHFINGAPSKISPLSVSSTSNPLKLKLRRTFRVSSEGA 62

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNEL+EDSKFVPLNA+DPRYGPPALLLLGFELEEAVKIQ+LLKDLDGEFMQVILCTEDMI
Sbjct: 63  PNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAVKIQELLKDLDGEFMQVILCTEDMI 122

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           T+SLWEAVHTNQPVLAKVKIA+SLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP
Sbjct: 123 TQSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 182

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEAL
Sbjct: 183 NAANKPVEELIEEIMGDHEAL 203

[Close]
BLAST of Lcy13g006290 vs. NCBI nr
Match: XP_023535741.1 (uncharacterized protein LOC111797077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 3.2e-86
Identity = 172/201 (85.57%), Postives = 180/201 (89.55%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSRAL S FF  I GAPS++    +SSTSN LK KL++  RASSEGA
Sbjct: 1   MASSLTFSPYPFLNSRALPSTFFHFIIGAPSRIPPLSVSSTSNPLKLKLRRTLRASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNELIEDSKFVPLNA+DP YGPPALLLLGFELE+AVKIQ+LLK LDGEFMQVILCTEDMI
Sbjct: 61  PNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQVILCTEDMI 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           TRSLWEAVHTNQP LAKVKIAKSLPRICFLSGLSGEE MMFIDAFPETGLEPAVFAALVP
Sbjct: 121 TRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEAL
Sbjct: 181 NAANKPVEELIEEIMGDHEAL 201

[Close]
BLAST of Lcy13g006290 vs. NCBI nr
Match: XP_038891526.1 (uncharacterized protein LOC120080918 isoform X1 [Benincasa hispida])

HSP 1 Score: 328.6 bits (841), Expect = 4.2e-86
Identity = 172/207 (83.09%), Postives = 183/207 (88.41%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSE-- 60
           +AS L  SPY  LNSRAL   FF  INGAPS++S   +SSTSN LK KL++  R SSE  
Sbjct: 3   LASSLTFSPYPLLNSRALPPTFFHFINGAPSKISPLSVSSTSNPLKLKLRRTFRVSSEVN 62

Query: 61  ----GAPNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVIL 120
               GAPNEL+EDSKFVPLNA+DPRYGPPALLLLGFELEEAVKIQ+LLKDLDGEFMQVIL
Sbjct: 63  FTSTGAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAVKIQELLKDLDGEFMQVIL 122

Query: 121 CTEDMITRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAV 180
           CTEDMIT+SLWEAVHTNQPVLAKVKIA+SLPRICFLSGLSGEEMMMFIDAFPETGLEPAV
Sbjct: 123 CTEDMITQSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLEPAV 182

Query: 181 FAALVPNAANKPVEELIEEIMGDHEAL 202
           FAALVPNAANKPVEELIEEIMGDHEAL
Sbjct: 183 FAALVPNAANKPVEELIEEIMGDHEAL 209

[Close]
BLAST of Lcy13g006290 vs. NCBI nr
Match: XP_022956817.1 (uncharacterized protein LOC111458403 [Cucurbita moschata] >KAG7031981.1 hypothetical protein SDJN02_06023 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.4 bits (838), Expect = 9.3e-86
Identity = 171/201 (85.07%), Postives = 180/201 (89.55%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSRAL S FF  I GAPS++ +  +SS SN LK KL++  RASSEGA
Sbjct: 1   MASSLTFSPYPFLNSRALPSTFFHFIIGAPSRIPSLSVSSISNPLKLKLRRTLRASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNELIEDSKFVPLNA+DP YGPPALLLLGFELE+AVKIQ+LLK LDGEFMQVILCTEDMI
Sbjct: 61  PNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQVILCTEDMI 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
           TRSLWEAVHTNQP LAKVKIAKSLPRICFLSGLSGEE MMFIDAFPETGLEPAVFAALVP
Sbjct: 121 TRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEELIEEIMGDHEAL
Sbjct: 181 NAANKPVEELIEEIMGDHEAL 201

[Close]
BLAST of Lcy13g006290 vs. NCBI nr
Match: XP_022990015.1 (uncharacterized protein LOC111487032 [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0 

Query: 1   MASILIPSPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGA 60
           MAS L  SPY FLNSRAL S FF  I G+PS++S   +SS SN LK KL++  RASSEGA
Sbjct: 1   MASSLTFSPYAFLNSRALPSTFFHFIIGSPSRISPLSVSSISNPLKLKLRRTLRASSEGA 60

Query: 61  PNELIEDSKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMI 120
           PNELIEDSKFVPLNA+DP YGPPALLLLGFELE+AVKIQ+LLK LDGEFMQVILCTEDM 
Sbjct: 61  PNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQVILCTEDMF 120

Query: 121 TRSLWEAVHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVP 180
            RSLWEAVHTNQP LAKVKIAKSLPRICFLSGLSGEE MMFIDAFPETGLEPAVFAALVP
Sbjct: 121 NRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAALVP 180

Query: 181 NAANKPVEELIEEIMGDHEAL 202
           NAANKPVEEL+EEIMGDHEAL
Sbjct: 181 NAANKPVEELVEEIMGDHEAL 201

[Close]
BLAST of Lcy13g006290 vs. TAIR 10
Match: AT3G10405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 120/194 (61.86%), Postives = 144/194 (74.23%), Query Frame = 0 

Query: 8   SPYRFLNSRALASAFFPIINGAPSQLSAAPISSTSNLLKFKLKQPPRASSEGAPNELIED 67
           S Y +L S   +S  F ++    S L     S  +N    K K   R S++  P  L ED
Sbjct: 18  SSYTYLGS---SSRIFGLVTS--SLLWTKSKSHHTNTKLKKQKLCVRNSAQEIPKTLEED 77

Query: 68  SKFVPLNAEDPRYGPPALLLLGFELEEAVKIQDLLKDLDGEFMQVILCTEDMITRSLWEA 127
           SKFVPL+ +DPR+GPP LLLLG +L EA KIQ+LLK+LDGEFM+++ CT+DMI RSLWEA
Sbjct: 78  SKFVPLDPQDPRFGPPVLLLLGLQLHEAQKIQELLKELDGEFMEIVFCTDDMIKRSLWEA 137

Query: 128 VHTNQPVLAKVKIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAALVPNAANKPV 187
           V T QP L +VKIA+SLPRICFLSGL+GEEMMMFIDAFPETGLEP VFAA+VPN+A+KP+
Sbjct: 138 VTTKQPDLKRVKIAESLPRICFLSGLTGEEMMMFIDAFPETGLEPVVFAAMVPNSADKPI 197

Query: 188 EELIEEIMGDHEAL 202
            EL EEIMGDHE L
Sbjct: 198 FELTEEIMGDHELL 206

The following BLAST results are available for this feature:
BLAST of Lcy13g006290 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy13g006290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXF14.5e-8685.07uncharacterized protein LOC111458403 OS=Cucurbita moschata OX=3662 GN=LOC1114584... [more]
A0A6J1JNY65.0e-8583.58uncharacterized protein LOC111487032 OS=Cucurbita maxima OX=3661 GN=LOC111487032... [more]
A0A0A0KRH81.9e-8482.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622600 PE=4 SV=1[more]
A0A6J1CBE24.7e-8382.27uncharacterized protein LOC111009971 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A5A7SZ691.0e-8281.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Lcy13g006290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891527.14.5e-8885.57uncharacterized protein LOC120080918 isoform X2 [Benincasa hispida][more]
XP_023535741.13.2e-8685.57uncharacterized protein LOC111797077 [Cucurbita pepo subsp. pepo][more]
XP_038891526.14.2e-8683.09uncharacterized protein LOC120080918 isoform X1 [Benincasa hispida][more]
XP_022956817.19.3e-8685.07uncharacterized protein LOC111458403 [Cucurbita moschata] >KAG7031981.1 hypothet... [more]
XP_022990015.11.0e-8483.58uncharacterized protein LOC111487032 [Cucurbita maxima][more]
BLAST of Lcy13g006290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G10405.11.0e-5861.86unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen d... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016621Uncharacterised conserved protein UCP014543PFAMPF12646DUF3783coord: 146..201
e-value: 1.7E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR35732OS10G0545100 PROTEINcoord: 27..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g006290.1Lcy13g006290.1mRNA