Lcy13g006180 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g006180
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NAC domain-containing protein
Location	Chr13: 5420098 .. 5420937 (-)
RNA-Seq Expression	Lcy13g006180
Synteny	Lcy13g006180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGCATCACTTTTAGTTTACTTATCTTTTTAAGGTGCAATTTGACTTGTTTGCTGGGCTGTTTTCGAAACATATTCCAGGAAAATGCACATGACAGGTGTAATGAGGGTCTTCATTCATGTATTTTTATCATCAACTTCATGATGCAAAATTTCTTGACGTTTATTTCGTTGACATTTCTGAAAGTTGCCCTTCATTTTTGGTTTCTTACCATAAGAAGTTACATTTTGTTTTGTTTTCCCCAGGAAAAAACTCACTTCATCAACAAAGATCCAGTTATATCGAATGATCCTCCAAGAAACTCTCACAACTTCTTGTTTGTGTGCAAGAGTGAGAAATTGGAGGATTATACTCCACCTTCCATTATTGCCAATCCCAAACCCTTCCCGCTAATGAAGTATAAACGAAGAAGGCAGAGTGACTTAACCTCTGAACTTTCAAAAGCTTCAGAGAACTCATCCATGTCGAATGAAGAGCCCAGCCTATCCGAAACTGCTATTGCATCACAGACGGATGTGACAACGAGTAGTGTGACGACACCAACGACGAAAAACTTTCTTTCTACCTTAGTGGAATATTCACTATTAGAATCCACAGAACCGAAGGATGCTCCTGCTCCACCACCTGCATTAGAAACCTCAGATCTTAGTTCATCAGTGCATCCAAGCATCCTGAAATTCATCCAAGATTTGCAACATGAGATCCACAAGACTTCTATGGAGAGGGAGACACTGAAGTTTGAGCTGTTGAGTGCTCGAGCCATGATCAGCATCCTCCAATCCCGGATCGTCGTGCTGAATAAGGAAATCAATGATTTGAAGTCAAACTTTGATTAG

mRNA sequence

ATGGGATGCATCACTTTTAGTTTACTTATCTTTTTAAGGTGCAATTTGACTTGTTTGCTGGGCTGTTTTCGAAACATATTCCAGGAAAATGCACATGACAGGTGTAATGAGGGTCTTCATTCATGTATTTTTATCATCAACTTCATGATGCAAAATTTCTTGACGTTTATTTCGTTGACATTTCTGAAAGTTGCCCTTCATTTTTGGTTTCTTACCATAAGAAGTTACATTTTGTTTTGTTTTCCCCAGGAAAAAACTCACTTCATCAACAAAGATCCAGTTATATCGAATGATCCTCCAAGAAACTCTCACAACTTCTTGTTTGTGTGCAAGAGTGAGAAATTGGAGGATTATACTCCACCTTCCATTATTGCCAATCCCAAACCCTTCCCGCTAATGAAGTATAAACGAAGAAGGCAGAGTGACTTAACCTCTGAACTTTCAAAAGCTTCAGAGAACTCATCCATGTCGAATGAAGAGCCCAGCCTATCCGAAACTGCTATTGCATCACAGACGGATGTGACAACGAGTAGTGTGACGACACCAACGACGAAAAACTTTCTTTCTACCTTAGTGGAATATTCACTATTAGAATCCACAGAACCGAAGGATGCTCCTGCTCCACCACCTGCATTAGAAACCTCAGATCTTAGTTCATCAGTGCATCCAAGCATCCTGAAATTCATCCAAGATTTGCAACATGAGATCCACAAGACTTCTATGGAGAGGGAGACACTGAAGTTTGAGCTGTTGAGTGCTCGAGCCATGATCAGCATCCTCCAATCCCGGATCGTCGTGCTGAATAAGGAAATCAATGATTTGAAGTCAAACTTTGATTAG

Coding sequence (CDS)

ATGGGATGCATCACTTTTAGTTTACTTATCTTTTTAAGGTGCAATTTGACTTGTTTGCTGGGCTGTTTTCGAAACATATTCCAGGAAAATGCACATGACAGGTGTAATGAGGGTCTTCATTCATGTATTTTTATCATCAACTTCATGATGCAAAATTTCTTGACGTTTATTTCGTTGACATTTCTGAAAGTTGCCCTTCATTTTTGGTTTCTTACCATAAGAAGTTACATTTTGTTTTGTTTTCCCCAGGAAAAAACTCACTTCATCAACAAAGATCCAGTTATATCGAATGATCCTCCAAGAAACTCTCACAACTTCTTGTTTGTGTGCAAGAGTGAGAAATTGGAGGATTATACTCCACCTTCCATTATTGCCAATCCCAAACCCTTCCCGCTAATGAAGTATAAACGAAGAAGGCAGAGTGACTTAACCTCTGAACTTTCAAAAGCTTCAGAGAACTCATCCATGTCGAATGAAGAGCCCAGCCTATCCGAAACTGCTATTGCATCACAGACGGATGTGACAACGAGTAGTGTGACGACACCAACGACGAAAAACTTTCTTTCTACCTTAGTGGAATATTCACTATTAGAATCCACAGAACCGAAGGATGCTCCTGCTCCACCACCTGCATTAGAAACCTCAGATCTTAGTTCATCAGTGCATCCAAGCATCCTGAAATTCATCCAAGATTTGCAACATGAGATCCACAAGACTTCTATGGAGAGGGAGACACTGAAGTTTGAGCTGTTGAGTGCTCGAGCCATGATCAGCATCCTCCAATCCCGGATCGTCGTGCTGAATAAGGAAATCAATGATTTGAAGTCAAACTTTGATTAG

Protein sequence

MGCITFSLLIFLRCNLTCLLGCFRNIFQENAHDRCNEGLHSCIFIINFMMQNFLTFISLTFLKVALHFWFLTIRSYILFCFPQEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSDLTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEPKDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQSRIVVLNKEINDLKSNFD

Homology

[Close]

BLAST of Lcy13g006180 vs. ExPASy Swiss-Prot
Match: Q9SQY0 (NAC domain containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=NAC052 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 67/199 (33.67%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPP---SIIANPKPFPLMKYKRRR 142
           Q+  H  +  P   N+      N   + + +  E+  PP    ++    P PL++YKRRR
Sbjct: 256 QQNHHENDLKPEEHNNNNNYDENEETLKREQMEEEERPPRPVCVLNKEAPLPLLQYKRRR 315

Query: 143 QSDLTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLES 202
           QS+        S N+S  N +   S T        T  S +   T   +S L+E+SL+  
Sbjct: 316 QSE--------SNNNSSRNTQDHCSSTTTTVDNTTTLISSSAAATNTAISALLEFSLMGI 375

Query: 203 TEPKDAPAPPPALETSDLSSSVH-PSILKFIQDLQHEIHKTSMERETLKFELLSARAMIS 262
           ++ K+ P  P       L       S  + + DLQ EIH+ S+ERET K E++SA AMIS
Sbjct: 376 SDKKEKPQQPLRPHKEPLPPQTPLASPEEKVNDLQKEIHQMSVERETFKLEMMSAEAMIS 435

Query: 263 ILQSRIVVLNKEINDLKSN 278
           ILQSRI  L +E  +LK N
Sbjct: 436 ILQSRIDALRQENEELKKN 446

[Close]

BLAST of Lcy13g006180 vs. ExPASy Swiss-Prot
Match: Q9SQX9 (NAC domain containing protein 50 OS=Arabidopsis thaliana OX=3702 GN=NAC050 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 116 EDYTPPS--IIANPKPFPLMKYKRRRQSDLTSELSKASENSSMSNEEPSLSETAIASQTD 175
           ED  PPS  I+    P PL++YKRRRQ++       ++ NSS + ++   S       T 
Sbjct: 289 EDERPPSLCILNKEAPLPLLQYKRRRQNE-------SNNNSSRNTQDHCSSTITTVDNTT 348

Query: 176 VTTSSVTTPTTKNFLSTLVEYSLLESTEPKDAPAPPPALETSDLSSSVHPSILKFIQDLQ 235
              SS     T   +S L+E+SL+  ++ K+        ETS  S    P   + + DLQ
Sbjct: 349 TLISSSAAAATNTAISALLEFSLMGISDKKENQQKE---ETSPPSPIASPE--EKVNDLQ 408

Query: 236 HEIHKTSMERETLKFELLSARAMISILQSRIVVLNKEINDLK 276
            E+H+ S+ERET K E++SA AMISILQSRI  L +E  +LK
Sbjct: 409 KEVHQMSVERETFKLEMMSAEAMISILQSRIDALRQENEELK 438

[Close]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL
Match: A0A5D3CG05 (NAC domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002330 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 8.1e-96
Identity = 189/197 (95.94%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 253 QDKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 312

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           LTSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EP
Sbjct: 313 LTSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEP 372

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 373 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 432

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 433 RIVVLNKEINDLKSNYD 449

[Close]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL
Match: A0A0A0KWQ0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622480 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 8.1e-96
Identity = 189/197 (95.94%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 254 QDKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 313

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           LTSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EP
Sbjct: 314 LTSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEP 373

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 374 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 433

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 434 RIVVLNKEINDLKSNYD 450

[Close]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL
Match: A0A1S3BFG8 (NAC domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103489429 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 8.1e-96
Identity = 189/197 (95.94%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 253 QDKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 312

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           LTSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EP
Sbjct: 313 LTSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEP 372

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 373 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 432

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 433 RIVVLNKEINDLKSNYD 449

[Close]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL
Match: A0A6J1CB83 (NAC domain-containing protein 82-like OS=Momordica charantia OX=3673 GN=LOC111010069 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.1e-92
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           QEKT FINK+PVISNDPPRNSHNFLF+CKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 256 QEKTKFINKEPVISNDPPRNSHNFLFMCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 315

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           L SELSKASENS+MSNEEPSLSETAI SQTD TT+SV+TPTTKNFLS LVEYSLLESTEP
Sbjct: 316 LVSELSKASENSTMSNEEPSLSETAIGSQTDGTTTSVSTPTTKNFLSALVEYSLLESTEP 375

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQ+EIHKTSMERETLKFELLSARAMISILQS
Sbjct: 376 KDAPAPPPALETSDLSSSVHPSILKFIQDLQNEIHKTSMERETLKFELLSARAMISILQS 435

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN D
Sbjct: 436 RIVVLNKEINDLKSNHD 452

[Close]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL
Match: A0A6J1HU62 (NAC domain containing protein 50-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467499 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.6e-88
Identity = 181/195 (92.82%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           QEKT FINKD V+SNDPPRNSH+FLF+CKSE+LEDYTPPSIIANPKPF LMKYKRRRQSD
Sbjct: 257 QEKTQFINKDLVMSNDPPRNSHSFLFMCKSEELEDYTPPSIIANPKPFSLMKYKRRRQSD 316

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           L SELSKASENSSMSNEE SLSE A ASQTDVTTSS  TPTTKNFLSTLVEYSLLESTEP
Sbjct: 317 LPSELSKASENSSMSNEELSLSEIATASQTDVTTSSEMTPTTKNFLSTLVEYSLLESTEP 376

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KD+PAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 377 KDSPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 436

Query: 263 RIVVLNKEINDLKSN 278
           RIVVLNKEINDLKSN
Sbjct: 437 RIVVLNKEINDLKSN 451

[Close]

BLAST of Lcy13g006180 vs. NCBI nr
Match: XP_008446812.1 (PREDICTED: NAC domain-containing protein 16 [Cucumis melo] >KAA0034688.1 NAC domain-containing protein 16 [Cucumis melo var. makuwa] >TYK09239.1 NAC domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-95
Identity = 189/197 (95.94%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 253 QDKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 312

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           LTSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EP
Sbjct: 313 LTSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEP 372

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 373 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 432

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 433 RIVVLNKEINDLKSNYD 449

[Close]

BLAST of Lcy13g006180 vs. NCBI nr
Match: XP_004142442.1 (NAC domain containing protein 50 isoform X2 [Cucumis sativus] >KGN52231.1 hypothetical protein Csa_007988 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-95
Identity = 189/197 (95.94%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 254 QDKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 313

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           LTSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EP
Sbjct: 314 LTSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEP 373

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 374 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 433

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 434 RIVVLNKEINDLKSNYD 450

[Close]

BLAST of Lcy13g006180 vs. NCBI nr
Match: XP_031741540.1 (NAC domain containing protein 50 isoform X1 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 6.3e-95
Identity = 188/196 (95.92%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 84  EKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSDL 143
           +K HFINKDPVISNDPPR+SHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSDL
Sbjct: 262 DKAHFINKDPVISNDPPRSSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSDL 321

Query: 144 TSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEPK 203
           TSELSK SENSSMSNEEPSLSETAIASQTD+TT+SVTTPTTKNFLSTLVEYSLLES EPK
Sbjct: 322 TSELSKGSENSSMSNEEPSLSETAIASQTDITTTSVTTPTTKNFLSTLVEYSLLESAEPK 381

Query: 204 DAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQSR 263
           DAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQSR
Sbjct: 382 DAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQSR 441

Query: 264 IVVLNKEINDLKSNFD 280
           IVVLNKEINDLKSN+D
Sbjct: 442 IVVLNKEINDLKSNYD 457

[Close]

BLAST of Lcy13g006180 vs. NCBI nr
Match: XP_038892209.1 (NAC domain containing protein 50 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-93
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           Q+K H I+KDPVISNDPPRNSHNFLFVCKSEKL+DYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 256 QDKAHLISKDPVISNDPPRNSHNFLFVCKSEKLDDYTPPSIIANPKPFPLMKYKRRRQSD 315

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           L SELSK SENSSMSNEEPSLSETAIASQTD+TT+S TTPTTKNFLSTLVEYSLLES EP
Sbjct: 316 LNSELSKGSENSSMSNEEPSLSETAIASQTDITTTSATTPTTKNFLSTLVEYSLLESAEP 375

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS
Sbjct: 376 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 435

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN+D
Sbjct: 436 RIVVLNKEINDLKSNYD 452

[Close]

BLAST of Lcy13g006180 vs. NCBI nr
Match: XP_022139055.1 (NAC domain-containing protein 82-like [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 8.6e-92
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 142
           QEKT FINK+PVISNDPPRNSHNFLF+CKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD
Sbjct: 256 QEKTKFINKEPVISNDPPRNSHNFLFMCKSEKLEDYTPPSIIANPKPFPLMKYKRRRQSD 315

Query: 143 LTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLESTEP 202
           L SELSKASENS+MSNEEPSLSETAI SQTD TT+SV+TPTTKNFLS LVEYSLLESTEP
Sbjct: 316 LVSELSKASENSTMSNEEPSLSETAIGSQTDGTTTSVSTPTTKNFLSALVEYSLLESTEP 375

Query: 203 KDAPAPPPALETSDLSSSVHPSILKFIQDLQHEIHKTSMERETLKFELLSARAMISILQS 262
           KDAPAPPPALETSDLSSSVHPSILKFIQDLQ+EIHKTSMERETLKFELLSARAMISILQS
Sbjct: 376 KDAPAPPPALETSDLSSSVHPSILKFIQDLQNEIHKTSMERETLKFELLSARAMISILQS 435

Query: 263 RIVVLNKEINDLKSNFD 280
           RIVVLNKEINDLKSN D
Sbjct: 436 RIVVLNKEINDLKSNHD 452

[Close]

BLAST of Lcy13g006180 vs. TAIR 10
Match: AT3G10490.2 (NAC domain containing protein 52 )

HSP 1 Score: 82.0 bits (201), Expect = 8.2e-16
Identity = 67/199 (33.67%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 83  QEKTHFINKDPVISNDPPRNSHNFLFVCKSEKLEDYTPP---SIIANPKPFPLMKYKRRR 142
           Q+  H  +  P   N+      N   + + +  E+  PP    ++    P PL++YKRRR
Sbjct: 256 QQNHHENDLKPEEHNNNNNYDENEETLKREQMEEEERPPRPVCVLNKEAPLPLLQYKRRR 315

Query: 143 QSDLTSELSKASENSSMSNEEPSLSETAIASQTDVTTSSVTTPTTKNFLSTLVEYSLLES 202
           QS+        S N+S  N +   S T        T  S +   T   +S L+E+SL+  
Sbjct: 316 QSE--------SNNNSSRNTQDHCSSTTTTVDNTTTLISSSAAATNTAISALLEFSLMGI 375

Query: 203 TEPKDAPAPPPALETSDLSSSVH-PSILKFIQDLQHEIHKTSMERETLKFELLSARAMIS 262
           ++ K+ P  P       L       S  + + DLQ EIH+ S+ERET K E++SA AMIS
Sbjct: 376 SDKKEKPQQPLRPHKEPLPPQTPLASPEEKVNDLQKEIHQMSVERETFKLEMMSAEAMIS 435

Query: 263 ILQSRIVVLNKEINDLKSN 278
           ILQSRI  L +E  +LK N
Sbjct: 436 ILQSRIDALRQENEELKKN 446

[Close]

BLAST of Lcy13g006180 vs. TAIR 10
Match: AT3G10480.1 (NAC domain containing protein 50 )

HSP 1 Score: 78.6 bits (192), Expect = 9.0e-15
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 116 EDYTPPS--IIANPKPFPLMKYKRRRQSDLTSELSKASENSSMSNEEPSLSETAIASQTD 175
           ED  PPS  I+    P PL++YKRRRQ++       ++ NSS + ++   S       T 
Sbjct: 289 EDERPPSLCILNKEAPLPLLQYKRRRQNE-------SNNNSSRNTQDHCSSTITTVDNTT 348

Query: 176 VTTSSVTTPTTKNFLSTLVEYSLLESTEPKDAPAPPPALETSDLSSSVHPSILKFIQDLQ 235
              SS     T   +S L+E+SL+  ++ K+        ETS  S    P   + + DLQ
Sbjct: 349 TLISSSAAAATNTAISALLEFSLMGISDKKENQQKE---ETSPPSPIASPE--EKVNDLQ 408

Query: 236 HEIHKTSMERETLKFELLSARAMISILQSRIVVLNKEINDLK 276
            E+H+ S+ERET K E++SA AMISILQSRI  L +E  +LK
Sbjct: 409 KEVHQMSVERETFKLEMMSAEAMISILQSRIDALRQENEELK 438

[Close]

BLAST of Lcy13g006180 vs. TAIR 10
Match: AT3G10480.2 (NAC domain containing protein 50 )

HSP 1 Score: 78.6 bits (192), Expect = 9.0e-15
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 116 EDYTPPS--IIANPKPFPLMKYKRRRQSDLTSELSKASENSSMSNEEPSLSETAIASQTD 175
           ED  PPS  I+    P PL++YKRRRQ++       ++ NSS + ++   S       T 
Sbjct: 288 EDERPPSLCILNKEAPLPLLQYKRRRQNE-------SNNNSSRNTQDHCSSTITTVDNTT 347

Query: 176 VTTSSVTTPTTKNFLSTLVEYSLLESTEPKDAPAPPPALETSDLSSSVHPSILKFIQDLQ 235
              SS     T   +S L+E+SL+  ++ K+        ETS  S    P   + + DLQ
Sbjct: 348 TLISSSAAAATNTAISALLEFSLMGISDKKENQQKE---ETSPPSPIASPE--EKVNDLQ 407

Query: 236 HEIHKTSMERETLKFELLSARAMISILQSRIVVLNKEINDLK 276
            E+H+ S+ERET K E++SA AMISILQSRI  L +E  +LK
Sbjct: 408 KEVHQMSVERETFKLEMMSAEAMISILQSRIDALRQENEELK 437

[Close]

BLAST of Lcy13g006180 vs. TAIR 10
Match: AT3G10480.3 (NAC domain containing protein 50 )

HSP 1 Score: 78.6 bits (192), Expect = 9.0e-15
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 116 EDYTPPS--IIANPKPFPLMKYKRRRQSDLTSELSKASENSSMSNEEPSLSETAIASQTD 175
           ED  PPS  I+    P PL++YKRRRQ++       ++ NSS + ++   S       T 
Sbjct: 368 EDERPPSLCILNKEAPLPLLQYKRRRQNE-------SNNNSSRNTQDHCSSTITTVDNTT 427

Query: 176 VTTSSVTTPTTKNFLSTLVEYSLLESTEPKDAPAPPPALETSDLSSSVHPSILKFIQDLQ 235
              SS     T   +S L+E+SL+  ++ K+        ETS  S    P   + + DLQ
Sbjct: 428 TLISSSAAAATNTAISALLEFSLMGISDKKENQQKE---ETSPPSPIASPE--EKVNDLQ 487

Query: 236 HEIHKTSMERETLKFELLSARAMISILQSRIVVLNKEINDLK 276
            E+H+ S+ERET K E++SA AMISILQSRI  L +E  +LK
Sbjct: 488 KEVHQMSVERETFKLEMMSAEAMISILQSRIDALRQENEELK 517

The following BLAST results are available for this feature:

BLAST of Lcy13g006180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQY0	1.1e-14	33.67	NAC domain containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=NAC052 PE=1 ...	[more]
Q9SQX9	1.3e-13	38.27	NAC domain containing protein 50 OS=Arabidopsis thaliana OX=3702 GN=NAC050 PE=1 ...	[more]

BLAST of Lcy13g006180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG05	8.1e-96	95.94	NAC domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KWQ0	8.1e-96	95.94	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622480 PE=4 SV...	[more]
A0A1S3BFG8	8.1e-96	95.94	NAC domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103489429 PE=4 SV...	[more]
A0A6J1CB83	4.1e-92	93.91	NAC domain-containing protein 82-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1HU62	3.6e-88	92.82	NAC domain containing protein 50-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lcy13g006180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446812.1	1.7e-95	95.94	PREDICTED: NAC domain-containing protein 16 [Cucumis melo] >KAA0034688.1 NAC dom...	[more]
XP_004142442.1	1.7e-95	95.94	NAC domain containing protein 50 isoform X2 [Cucumis sativus] >KGN52231.1 hypoth...	[more]
XP_031741540.1	6.3e-95	95.92	NAC domain containing protein 50 isoform X1 [Cucumis sativus]	[more]
XP_038892209.1	2.0e-93	93.91	NAC domain containing protein 50 [Benincasa hispida]	[more]
XP_022139055.1	8.6e-92	93.91	NAC domain-containing protein 82-like [Momordica charantia]	[more]

BLAST of Lcy13g006180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10490.2	8.2e-16	33.67	NAC domain containing protein 52	[more]
AT3G10480.1	9.0e-15	38.27	NAC domain containing protein 50	[more]
AT3G10480.2	9.0e-15	38.27	NAC domain containing protein 50	[more]
AT3G10480.3	9.0e-15	38.27	NAC domain containing protein 50	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..277
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..181
None	No IPR available	PANTHER	PTHR31989:SF348	NAC DOMAIN-CONTAINING PROTEIN-RELATED	coord: 142..275
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 142..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g006180.1	Lcy13g006180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding