Lcy13g005870 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g005870
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr13: 5065797 .. 5067008 (-)
RNA-Seq ExpressionLcy13g005870
SyntenyLcy13g005870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTATCTACTATAATAATTCTAATATCCTAGAAGCTGATTTAGGTAGGAAGCCATCATTTCTGTGGAGGAGTCTATTATGGGGTAGGGATCTCCTAGCTAAAGGCCTGAGAAAGAGGATTGGAAATGGTGAAACCACAGCTATGTTCAGGGACCCTTGGTTACCTAAGGAACTAACATTTAAACCTACCTGTATTAATTGGGACATGATTAATAGTAGGGTGCCTGATTTCATTCTTCCTTCGGGAACATGGGATCTAGATAAAATTAATAATGCAGTTCTTAGCTCTGACATTGATGCAATTAGAAGCGTTCCCCTGAATAGAAACCTTAAGGATAAGCTCATATGGCATTATGATAGAACTGGAGCATACTCAGTTAAAAGTGGTTATAGACTTTTTATGCAGGAAAAGCTAAACGGCATATCCTCTAGTAATAGCCCTATGTCTAATATCTGGTCTAGTCTTTGGAAACTCAAAATTCCGAATAAAATAAAGTTATTCTGCTGGAGAGCTTTAAACAATTCATTGCCTAATCGGGTCAATTTAAAAAATATAGGAATTGATTTATCTACTTGTTGCCCTGTTTGTAATTCTCAAGAAGAAAATTCAGATCATTGCCTATTTGAATGTAAAAGAGCTTATGATATTTGGAAACTAACCTTTGATAATGTTTACTTGGAGGAGAACTTCCATGGAAGCATGCTGGACAGATGGATCAAAATTAATCGGAGCACTTCCAAGGAAAATCTCGAGCTTGTAGCGGTCTCCTACTGGGCAATATGGAACGACAGAAACAAAATCGTTCACGGTGAAGAAATTCCATCTATTAATTTTAGAAGCAAATGGATCACGGAATACCTGGAAAAATTTCGCCAGATGAACCCTAAGGAAGACGCTAGATCGATGATTCCGCAAAGATCTGATCGAATAGCCTCTCGTTTGACTGCATGTTGGAAAGTCCCTCCATCTGGTTTTTGGAAGCTCAATTGCGATGCCGCATGTGATCCCAATCGCCAGTCGACAAGTCTTGGCATCATATGCAGAAACAAGGAAGGAAAAGCTATGGTGGCTAACGCTATATACTTGGATCATCAATTGGAAGCCCATGCCGCTGAAACTTGGGCCATTTATGAAGGATTGCAACGGGCCTACTCTTTGGGCTGTATGAAGCTGGAGGTGGAATCTGATAGTAATGGAAAAATTTAG

mRNA sequence

ATGAAGAGTATCTACTATAATAATTCTAATATCCTAGAAGCTGATTTAGGTAGGAAGCCATCATTTCTGTGGAGGAGTCTATTATGGGGTAGGGATCTCCTAGCTAAAGGCCTGAGAAAGAGGATTGGAAATGGTGAAACCACAGCTATGTTCAGGGACCCTTGGTTACCTAAGGAACTAACATTTAAACCTACCTGTATTAATTGGGACATGATTAATAGTAGGGTGCCTGATTTCATTCTTCCTTCGGGAACATGGGATCTAGATAAAATTAATAATGCAGTTCTTAGCTCTGACATTGATGCAATTAGAAGCGTTCCCCTGAATAGAAACCTTAAGGATAAGCTCATATGGCATTATGATAGAACTGGAGCATACTCAGTTAAAAGTGGTTATAGACTTTTTATGCAGGAAAAGCTAAACGGCATATCCTCTAGTAATAGCCCTATGTCTAATATCTGGTCTAGTCTTTGGAAACTCAAAATTCCGAATAAAATAAAGTTATTCTGCTGGAGAGCTTTAAACAATTCATTGCCTAATCGGGTCAATTTAAAAAATATAGGAATTGATTTATCTACTTGTTGCCCTGTTTGTAATTCTCAAGAAGAAAATTCAGATCATTGCCTATTTGAATGTAAAAGAGCTTATGATATTTGGAAACTAACCTTTGATAATGTTTACTTGGAGGAGAACTTCCATGGAAGCATGCTGGACAGATGGATCAAAATTAATCGGAGCACTTCCAAGGAAAATCTCGAGCTTGTAGCGGTCTCCTACTGGGCAATATGGAACGACAGAAACAAAATCGTTCACGGTGAAGAAATTCCATCTATTAATTTTAGAAGCAAATGGATCACGGAATACCTGGAAAAATTTCGCCAGATGAACCCTAAGGAAGACGCTAGATCGATGATTCCGCAAAGATCTGATCGAATAGCCTCTCGTTTGACTGCATGTTGGAAAGTCCCTCCATCTGGTTTTTGGAAGCTCAATTGCGATGCCGCATGTGATCCCAATCGCCAGTCGACAAGTCTTGGCATCATATGCAGAAACAAGGAAGGAAAAGCTATGGTGGCTAACGCTATATACTTGGATCATCAATTGGAAGCCCATGCCGCTGAAACTTGGGCCATTTATGAAGGATTGCAACGGGCCTACTCTTTGGGCTGTATGAAGCTGGAGGTGGAATCTGATAGTAATGGAAAAATTTAG

Coding sequence (CDS)

ATGAAGAGTATCTACTATAATAATTCTAATATCCTAGAAGCTGATTTAGGTAGGAAGCCATCATTTCTGTGGAGGAGTCTATTATGGGGTAGGGATCTCCTAGCTAAAGGCCTGAGAAAGAGGATTGGAAATGGTGAAACCACAGCTATGTTCAGGGACCCTTGGTTACCTAAGGAACTAACATTTAAACCTACCTGTATTAATTGGGACATGATTAATAGTAGGGTGCCTGATTTCATTCTTCCTTCGGGAACATGGGATCTAGATAAAATTAATAATGCAGTTCTTAGCTCTGACATTGATGCAATTAGAAGCGTTCCCCTGAATAGAAACCTTAAGGATAAGCTCATATGGCATTATGATAGAACTGGAGCATACTCAGTTAAAAGTGGTTATAGACTTTTTATGCAGGAAAAGCTAAACGGCATATCCTCTAGTAATAGCCCTATGTCTAATATCTGGTCTAGTCTTTGGAAACTCAAAATTCCGAATAAAATAAAGTTATTCTGCTGGAGAGCTTTAAACAATTCATTGCCTAATCGGGTCAATTTAAAAAATATAGGAATTGATTTATCTACTTGTTGCCCTGTTTGTAATTCTCAAGAAGAAAATTCAGATCATTGCCTATTTGAATGTAAAAGAGCTTATGATATTTGGAAACTAACCTTTGATAATGTTTACTTGGAGGAGAACTTCCATGGAAGCATGCTGGACAGATGGATCAAAATTAATCGGAGCACTTCCAAGGAAAATCTCGAGCTTGTAGCGGTCTCCTACTGGGCAATATGGAACGACAGAAACAAAATCGTTCACGGTGAAGAAATTCCATCTATTAATTTTAGAAGCAAATGGATCACGGAATACCTGGAAAAATTTCGCCAGATGAACCCTAAGGAAGACGCTAGATCGATGATTCCGCAAAGATCTGATCGAATAGCCTCTCGTTTGACTGCATGTTGGAAAGTCCCTCCATCTGGTTTTTGGAAGCTCAATTGCGATGCCGCATGTGATCCCAATCGCCAGTCGACAAGTCTTGGCATCATATGCAGAAACAAGGAAGGAAAAGCTATGGTGGCTAACGCTATATACTTGGATCATCAATTGGAAGCCCATGCCGCTGAAACTTGGGCCATTTATGAAGGATTGCAACGGGCCTACTCTTTGGGCTGTATGAAGCTGGAGGTGGAATCTGATAGTAATGGAAAAATTTAG

Protein sequence

MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKELTFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNRNLKDKLIWHYDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLPNRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLDRWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPKEDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDSNGKI
Homology
BLAST of Lcy13g005870 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 24/64 (37.50%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
           ++S Y+ +S+++E  +G +PS+ WRS++ GR+LL++GL + IG+G  T ++ D W+  E 
Sbjct: 89  LRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDET 148

Query: 61  TFKP 65
              P
Sbjct: 149 PLPP 152

BLAST of Lcy13g005870 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 150/401 (37.41%), Postives = 219/401 (54.61%), Query Frame = 0

Query: 1    MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
            +K  Y+ ++++L+A    K S+ W+  LWGRDLL KGLR R+GNG T   F DPWLP+  
Sbjct: 978  LKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPT 1037

Query: 61   TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNR-NLKDKLIWH 120
            TFKP   N   +++ V  FI   G WD+  I+++  + D D I S+P++  NL+D  +WH
Sbjct: 1038 TFKPLRFNNGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWH 1097

Query: 121  YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
            YD+ G YSV+SGY+L+M  K N  S+S +     W+S+WKL +P KIK+F WR+ +  +P
Sbjct: 1098 YDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIP 1157

Query: 181  NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNV-YLEENFHGSMLD 240
               NL   GI     C +C  + E+  H  F CKRA  IW+  F  +  L    + S L+
Sbjct: 1158 TAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLE 1217

Query: 241  RWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPK 300
             W  +      ++L L A++ W IWNDRN ++HG+++  + F+ +W+T +L+   Q    
Sbjct: 1218 LWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQ-- 1277

Query: 301  EDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMV 360
                S    R+      +   W+   S   KLN DAAC     STS G I R+     + 
Sbjct: 1278 ---MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAAC--RGASTSFGCIIRDSSCSLVA 1337

Query: 361  ANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDS 400
            A +I +   L    AE   I EGL+ A +     LEVESDS
Sbjct: 1338 ATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDS 1371

BLAST of Lcy13g005870 vs. ExPASy TrEMBL
Match: A0A803QJ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.3e-58
Identity = 129/400 (32.25%), Postives = 201/400 (50.25%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
           +K  Y+ +S+ L+A+LG  PS  WR ++WG++LLAKGLR ++GNGE       PWLP   
Sbjct: 65  LKPRYFRSSSFLDANLGSYPSLTWRGIVWGKELLAKGLRWKVGNGEDILCASAPWLPGHT 124

Query: 61  TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLN-RNLKDKLIWH 120
           +FKP     +    +V D IL    W+   +N   L SDI  I+S+PL      D +IWH
Sbjct: 125 SFKPLQFRGNNAAMKVSDLILNCRQWNYSLLNTLFLPSDIALIQSIPLTFVEHHDTMIWH 184

Query: 121 YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
           ++ TG YSVKSGY L  + +     SS +     W   W LK+P+KI++F WRA+++ LP
Sbjct: 185 HESTGVYSVKSGYILATKLEEQQPMSSGNQAQLWWKKFWGLKLPSKIRIFLWRAIHDCLP 244

Query: 181 NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLDR 240
               L    I  S+ C +CN   E   H LF CKR   +W+ +  +++   + H ++ + 
Sbjct: 245 VADILHTRHIADSSQCTLCNRANETIFHALFHCKRPKKVWQCSDFSLHSILSRHMNLKEL 304

Query: 241 WIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPKE 300
           +++++   S   LE  A   W+IW +RNK  HG +    +    +   Y+ ++  ++ ++
Sbjct: 305 FLQVSSEWSSLRLEQFATILWSIWTERNKERHGSKPKPHDVLLYFALSYISEYHDVHGRQ 364

Query: 301 DARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVA 360
            A S  P      A    + W  PPSG  KLN DAA +     +  G + R+  G+ + A
Sbjct: 365 PATSSAPAAGHNTAVTKDSDWLNPPSGRLKLNTDAAINTMENKSGFGAVLRDCSGQIIAA 424

Query: 361 NAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDS 400
            +            E  A+   LQ    L      +E+DS
Sbjct: 425 MSTPFCGCFTPEITEALALMHALQWIKDLQLPLHYIETDS 464

BLAST of Lcy13g005870 vs. ExPASy TrEMBL
Match: A0A803P2K3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.2e-57
Identity = 126/411 (30.66%), Postives = 203/411 (49.39%), Query Frame = 0

Query: 1    MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
            +K  Y++N+N LEA LG  PS  W+ + WGR+LL +GLR +IGNG T    RD W+P   
Sbjct: 1152 LKHRYFSNNNFLEARLGHSPSLTWQGIHWGRELLVEGLRYKIGNGYTVLAGRDKWIPGYT 1211

Query: 61   TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLN-RNLKDKLIWH 120
             FKP           V +FI     W++  +N    + D+D I ++PL+    +D+LIWH
Sbjct: 1212 DFKPVSYR-GADTLTVSNFITDQREWNIPLLNQFFNAIDVDKIVTIPLSFFPSQDRLIWH 1271

Query: 121  YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
               TG Y+V SG+ L      N  S +++  +N W + W L +P+K+K+F WR + N+LP
Sbjct: 1272 STTTGCYTVNSGFHLAENLAANRDSHASTSHTNWWKTFWSLNLPSKVKIFAWRVMQNALP 1331

Query: 181  NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIW---KLTFDNVYLEENFHGSM 240
                L    +  S  C +CN+  E+  H LF C +A  +W   K T D+ +    F+G  
Sbjct: 1332 TATGLHRRKVIDSAMCSLCNNAWESIGHALFNCTKAKKVWRDTKFTIDHTHTHNMFNGDY 1391

Query: 241  LDRWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMN 300
            L   I ++   SK++ EL+  + WAIW+DRN+++HG      +    + + +L+K+ +  
Sbjct: 1392 L---IHLSTLHSKQDFELIICTMWAIWHDRNRVLHGGLSQPSSVTVSFASSHLDKYHRAT 1451

Query: 301  PKEDAR--------SMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGII 360
             ++  +        S +P             W  P     K+N DAA D  R+   +G I
Sbjct: 1452 ERKQQQYQNCISQTSPVPAAETFQQGVQHLPWSSPIFNGLKMNVDAAVDQARKIMGVGAI 1511

Query: 361  CRNKEGKAMVANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDS 400
             R+  G  + A +  +     +   E  A+Y  L  A  L      +++D+
Sbjct: 1512 VRDHFGYVIAAMSKPVQGSFRSDEMEAKALYHSLNWALQLQLKLTHIDTDA 1558

BLAST of Lcy13g005870 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-56
Identity = 135/400 (33.75%), Postives = 193/400 (48.25%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
           +K+ Y+    +LEA  G   SF+WRSL+WG+ L+ KG R R+GNGE+  +  DPWLP+ +
Sbjct: 232 LKASYFPRKGVLEAGCGANASFVWRSLVWGKKLILKGYRWRVGNGESVRVLEDPWLPRPV 291

Query: 61  TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNR-NLKDKLIWH 120
           TFK         N  V D  L  G WD   I +    +D+D I  +P +  + +DK++WH
Sbjct: 292 TFKVYDQPSLPANLYVTDLKLADGQWDEGFIRSIFNPTDVDLILGIPCSDWDFEDKILWH 351

Query: 121 YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
           Y + G YSVKSGYR+          S+   +   W  LW+LKIP K+K F W+  +N LP
Sbjct: 352 YSKYGEYSVKSGYRMAASFTTEQHQSNEHSIVQWWKKLWRLKIPPKVKHFVWKVAHNWLP 411

Query: 181 NRVNLKNIGIDLSTCCPVCNSQ-EENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLD 240
             VNL   GI  S  C  C+S  +E+  H L+ECK +   W+++     L++      L 
Sbjct: 412 ANVNLAKRGIASSVVCSRCSSHVDESVAHALWECKASKGYWRVSGLYDDLKQMLGEDNLT 471

Query: 241 RWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPK 300
             ++I     KE LE   +  W IWN RN +VHG   P      +W   +L  FR    +
Sbjct: 472 MLMRIAAEWDKEKLEFFLLVSWNIWNVRNTVVHGGYHPKPEEMIEWCGNFLADFRGDTGR 531

Query: 301 EDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMV 360
           E        RS R  S   + W  P      +N DA        + LG + R+  G  + 
Sbjct: 532 E--------RSQR--SSEDSRWVPPARDQVTINVDAGVKQGGLISGLGYVVRDAAGVVLS 591

Query: 361 ANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESD 399
           A A  L  +L     E  AI +G+Q        +  VE+D
Sbjct: 592 AAATVLQQELPPLQLELMAIKKGIQVGIQQRLQRFSVETD 621

BLAST of Lcy13g005870 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-56
Identity = 127/386 (32.90%), Postives = 199/386 (51.55%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
           +K+ Y+  +  LEA++G  PS  WRS++WG++LL KGLR ++GNG       DPWLP   
Sbjct: 364 LKARYFKYNTFLEAEIGSYPSLTWRSIIWGKELLTKGLRWKVGNGNQILCASDPWLPGIT 423

Query: 61  TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNR-NLKDKLIWH 120
           +FKP       ++ +V + I     W+   +    L SD+  I+S+PL   +  D+LIW+
Sbjct: 424 SFKPLIFKNPSLSMKVSELITNQRQWNHSLLQQCFLESDVAKIQSIPLTLCDQSDQLIWN 483

Query: 121 YDRTGAYSVKSGYRLF--MQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNS 180
           ++  G YSVKSGY L   ++E+L   SS+NS     W   W L +P+KIK+F WRA+++ 
Sbjct: 484 FENNGMYSVKSGYTLATRLEEQLPAASSNNS--LQWWKKFWSLTLPSKIKIFLWRAMHDC 543

Query: 181 LPNRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSML 240
           LP    L +  I  S  C +C+   E++ H LF CKR   IW+L+  ++      + S++
Sbjct: 544 LPVADILHHRHISDSAICTLCHQAIESTTHALFWCKRPRKIWQLSSFSISDFVTHNMSLM 603

Query: 241 DRWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNP 300
           D    +++  S + +E  A   W+IWN+RNK  HG +         +  +Y+E+F+    
Sbjct: 604 DVLQNMSQIWSSKQIEQFACILWSIWNERNKERHGSKTKPPEMTLFFAMDYIEEFQSARL 663

Query: 301 KEDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAM 360
                      + R + +    W  PPSG  KLN DAA +    ++  G I RN  G  +
Sbjct: 664 NTSFADSATHATTR-SQQQELPWMNPPSGRLKLNTDAAVNAVENTSGFGAILRNDTGDII 723

Query: 361 VANAIYLDHQLEAHAAETWAIYEGLQ 384
            A A+      +    E  A+   LQ
Sbjct: 724 AAMAMPFKGCFKPEIMEALALIYSLQ 746

BLAST of Lcy13g005870 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 296.6 bits (758), Expect = 3.3e-76
Identity = 150/401 (37.41%), Postives = 219/401 (54.61%), Query Frame = 0

Query: 1    MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
            +K  Y+ ++++L+A    K S+ W+  LWGRDLL KGLR R+GNG T   F DPWLP+  
Sbjct: 978  LKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPT 1037

Query: 61   TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNR-NLKDKLIWH 120
            TFKP   N   +++ V  FI   G WD+  I+++  + D D I S+P++  NL+D  +WH
Sbjct: 1038 TFKPLRFNNGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWH 1097

Query: 121  YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
            YD+ G YSV+SGY+L+M  K N  S+S +     W+S+WKL +P KIK+F WR+ +  +P
Sbjct: 1098 YDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIP 1157

Query: 181  NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNV-YLEENFHGSMLD 240
               NL   GI     C +C  + E+  H  F CKRA  IW+  F  +  L    + S L+
Sbjct: 1158 TAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLE 1217

Query: 241  RWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPK 300
             W  +      ++L L A++ W IWNDRN ++HG+++  + F+ +W+T +L+   Q    
Sbjct: 1218 LWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQ-- 1277

Query: 301  EDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMV 360
                S    R+      +   W+   S   KLN DAAC     STS G I R+     + 
Sbjct: 1278 ---MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAAC--RGASTSFGCIIRDSSCSLVA 1337

Query: 361  ANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDS 400
            A +I +   L    AE   I EGL+ A +     LEVESDS
Sbjct: 1338 ATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDS 1371

BLAST of Lcy13g005870 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-58
Identity = 128/360 (35.56%), Postives = 184/360 (51.11%), Query Frame = 0

Query: 5    YYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKELTFKP 64
            Y++N N L A LG  PS  WRSL+WG++LL KGLR R+G+GE      D WLP   TFKP
Sbjct: 902  YFSNGNYLIAGLGSNPSLTWRSLVWGKELLLKGLRWRVGSGERINCKTDSWLPGHTTFKP 961

Query: 65   TCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNRNLKDK-LIWHYDRT 124
                    N  V D I    TWD+  +      +DI+ + S+PL+    D  LIW+   T
Sbjct: 962  YFFKGPDPNLLVADLITEHRTWDMISLETNFNQADINRVLSIPLSPYPHDDVLIWNQSFT 1021

Query: 125  GAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLPNRVN 184
            G Y+VKSGY   +       S+ ++ + + WS+ WKLK+P K+++F W+  + SLP    
Sbjct: 1022 GVYNVKSGYHFAVSLAEQDDSTCSNSIEHWWSNFWKLKLPPKVRIFVWKVFHTSLPVAAE 1081

Query: 185  LKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLDRWIKI 244
            L    I  S  C +CNS EE   H LF C RA  +W+L+  ++  +     S  D  + +
Sbjct: 1082 LYRRHIAFSPYCTICNSCEETVHHALFSCPRAKAVWELSNFSIDFQTIERSSTADTLLLL 1141

Query: 245  NRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPK--EDA 304
            + S S   LEL  V  W+IW++RN I HG  + +    + +   YL +F+Q   K  +  
Sbjct: 1142 STSLSSSELELFLVLCWSIWHERNAIYHGNSVRTPAAVAAYAPSYLTEFQQARAKNAKPV 1201

Query: 305  RSMIPQRSDRIASRLTAC--WKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVA 360
             +       R +S       W  PP G  KLN DAA D  R +  +G + RN +G  + A
Sbjct: 1202 TASGAATPSRPSSEFIHAPKWTTPPRGRLKLNTDAAIDKERNTIGIGAVLRNSDGIIVAA 1261

BLAST of Lcy13g005870 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 230.3 bits (586), Expect = 2.9e-56
Identity = 125/364 (34.34%), Postives = 195/364 (53.57%), Query Frame = 0

Query: 1    MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
            +++ Y+ + + + A LG  PSF+WRS+LWGR +++KG + RIGNG++  + ++ WLP+ L
Sbjct: 812  LQARYFQHKDFMNARLGSNPSFIWRSILWGRQVISKGSKWRIGNGQSIMLHKENWLPRPL 871

Query: 61   TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPL-NRNLKDKLIWH 120
            TFKP        ++ V + I    TW+   I+      D +AI  + L  R +KD++IWH
Sbjct: 872  TFKPISKPSLPADALVAELINEDHTWNEGLIHRHFTKIDAEAIVRILLPRRPMKDEVIWH 931

Query: 121  YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
            YD+ G YSVKSGY++ +  K     +S++   N W+++W L +P KI++F WRA  N LP
Sbjct: 932  YDKKGQYSVKSGYQIALNLKFPAKPTSSATTENQWNAIWLLTLPEKIRIFAWRAAKNLLP 991

Query: 181  NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLDR 240
            +  NL    +     C  CN + E   H L  CK    IWK+T     L+++    ML  
Sbjct: 992  SAENLWKRKVLQEPLCQFCNKKLETIFHALVGCKVVQKIWKITRFEDDLKDSVEQDMLSL 1051

Query: 241  WIKINRSTSKENLELVAVSYWAIWNDRNK-IVHG-EEIPSINFRSKWITEYLEKFRQMNP 300
             I++    SK+++EL+    W IWN RN  I  G  +IP +          LE FR    
Sbjct: 1052 LIELKLRRSKDDIELLVTILWMIWNARNNWIFKGVNDIPHVTVSK--AEAVLEAFR---- 1111

Query: 301  KEDARSMIPQRS--DRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGK 360
                R+ +P  +  D  +S     WK P  G++K+N DAA +  +Q   LG + R++ G 
Sbjct: 1112 ----RTQLPAATHIDIQSSSKLKAWKPPQRGYFKVNVDAATNLEKQIAGLGAVIRDEAGN 1165

BLAST of Lcy13g005870 vs. NCBI nr
Match: XP_030502765.1 (uncharacterized protein LOC115717936 [Cannabis sativa])

HSP 1 Score: 229.2 bits (583), Expect = 6.4e-56
Identity = 124/360 (34.44%), Postives = 179/360 (49.72%), Query Frame = 0

Query: 5    YYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKELTFKP 64
            Y++N N + + LG  PS  WRSL WG++LL KGLR R+G+G T     D W+P   TFKP
Sbjct: 791  YFSNGNFISSGLGSNPSLTWRSLFWGKELLLKGLRWRVGSGLTINCATDAWMPGNTTFKP 850

Query: 65   TCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNR-NLKDKLIWHYDRT 124
                    N  V D I     WDL  +      +D+D I S+PL+     D LIW +  T
Sbjct: 851  YFFKGADPNLMVADLISEQRQWDLISLQANFSQADVDRILSIPLSLFPHDDVLIWSHSFT 910

Query: 125  GAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLPNRVN 184
            G Y+VKSGY+L +       ++S+S M + WS+ WK+KIP K+++F W+  +++LP    
Sbjct: 911  GIYNVKSGYQLAVSLAEQDDTASSSSMEHWWSTFWKVKIPPKVRIFVWKVFHSTLPVAAE 970

Query: 185  LKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLTFDNVYLEENFHGSMLDRWIKI 244
            L    I  S  C +CNS EE+  H LF C RA  +W L+  N+        +  D  + +
Sbjct: 971  LYRRHIATSPYCTICNSAEESITHALFSCPRAKTVWDLSPLNIDFNTLRQTASADILLHL 1030

Query: 245  NRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQMNPK--EDA 304
            +   +    E   V  W  W++RN I HG  + S    + +   YL +F+    K  +  
Sbjct: 1031 STVLTTSEYEQFLVICWCNWHERNAIYHGNSVRSPQAVAAYAPSYLTEFQSARAKRSQPT 1090

Query: 305  RSMIPQRSDRIASRLTAC--WKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVA 360
             S +     R +S  T    W  PP G  KLN +AA D  R    +G   RN +G  + A
Sbjct: 1091 TSSVAATDPRPSSEFTHAPKWTAPPRGRLKLNTNAAIDRARNKVGIGATLRNADGFVVAA 1150

BLAST of Lcy13g005870 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 228.8 bits (582), Expect = 8.4e-56
Identity = 131/403 (32.51%), Postives = 197/403 (48.88%), Query Frame = 0

Query: 1    MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
            MK+ YY NS    A +G  PSF+WRS+LWG  ++ KG+R RIG+G+   +++D W+P+  
Sbjct: 979  MKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPA 1038

Query: 61   TFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPL-NRNLKDKLIWH 120
            TF+P         + V D I     W +D++    +  DI+AI  + L +   +D+++WH
Sbjct: 1039 TFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWH 1098

Query: 121  YDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNIWSSLWKLKIPNKIKLFCWRALNNSLP 180
            +D+ G YSVKSGY+L + +       S++  S +W   W L +P K+K+F WRAL N LP
Sbjct: 1099 FDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILP 1158

Query: 181  NRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKL----TFDNVYLEENFHGS 240
               NL          C  C  Q E   H L ECK A  IW L       +    ++F  +
Sbjct: 1159 TAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSA 1218

Query: 241  MLDRWIKINRSTSKENLELVAVSYWAIWNDRNKIVHGEEIPSINFRSKWITEYLEKFRQM 300
            + + W   +RS++ E  EL+ V  W IW+ RNK +   +     F +      L+ ++++
Sbjct: 1219 IQEMW---SRSSTAE-AELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRV 1278

Query: 301  NPKEDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGK 360
            +   +      +  D+        WK P     KLN DAA     Q   LG I R+ EGK
Sbjct: 1279 SKPGNVHGAKDRGIDQ------QKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGK 1338

Query: 361  AMVANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESD 399
             +         +     AE  AI+ GLQ A  +    L VESD
Sbjct: 1339 ILAVGIKQAQFRERVSLAEAEAIHWGLQVANQISSSSLIVESD 1371

BLAST of Lcy13g005870 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-38
Identity = 120/414 (28.99%), Postives = 191/414 (46.14%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPW----- 60
           MK+ Y+ + +IL+A + ++ S+ W SLL G  LL KG R  IG+G+   +  D       
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 61  ---LPKELTFKPTCINWDMINSRVPDFILPSGTWDLDKINNAVLSSDIDAIRSVPLNRNL 120
              L  E T+K   IN   +  R   +      WD  KI+  V  SD   I  + L ++ 
Sbjct: 61  PRPLNTEETYKEMTIN--NLFERKGSYYF----WDDSKISQFVDQSDHGFIHRIYLAKSK 120

Query: 121 K-DKLIWHYDRTGAYSVKSGYRLFMQEKLNGISSSNSPMSNI--WSSLWKLKIPNKIKLF 180
           K DK+IW+Y+ TG Y+V+SGY L   +    I + N P  +I   + +W L I  K+K F
Sbjct: 121 KPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHF 180

Query: 181 CWRALNNSLPNRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLT----FDN 240
            WRAL+ +L     L   G+ +   CP C+ + E+ +H LF C  A   W+L+      N
Sbjct: 181 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRN 240

Query: 241 VYLEENFHGSMLDRWIKINRSTSKENLELVAV-SYWAIWNDRNKIVHGEEIPSINFRSKW 300
             +  +F  ++ +    +  +T  +  +L+ V   W IW  RN +V  +   S    SK 
Sbjct: 241 QLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRES---PSKT 300

Query: 301 ITEYLEKFRQMNPKEDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTS 360
           +     +         +    P  + +IA      W+ PP+ + K N DA  D  +   +
Sbjct: 301 VLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE-WRNPPATYVKCNFDAGFDVQKLEAT 360

Query: 361 LGIICRNKEGKAMVANAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESD 399
            G I RN  G  +   ++ L H      AET A+   LQ+ +  G  ++ +E D
Sbjct: 361 GGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGD 404

BLAST of Lcy13g005870 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 4.5e-31
Identity = 117/409 (28.61%), Postives = 186/409 (45.48%), Query Frame = 0

Query: 2   KSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWL---PK 61
           KS Y++ S+ L A LG +PSF+W+S+   +++L +G R  +GNGE   ++R  WL   P 
Sbjct: 89  KSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPA 148

Query: 62  ELTFKPTCI---NWDMINS--RVPDFILPSG-TWDLDKINNAVLSSDIDAIRSV-PLNRN 121
               +   +    +  ++S  +V D I  SG  W  D I       +   I  + P  R 
Sbjct: 149 SAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRR 208

Query: 122 LKDKLIWHYDRTGAYSVKSGYRLFMQ--EKLNGISSSNSPMSN-IWSSLWKLKIPNKIKL 181
           + D   W Y  +G Y+VKSGY +  Q   K +     + P  N I+  +WK +   KI+ 
Sbjct: 209 ILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQH 268

Query: 182 FCWRALNNSLPNRVNLKNIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWKLT------ 241
           F W+ L+NSLP    L    +   + C  C S +E  +H LF+C  A   W ++      
Sbjct: 269 FLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPL 328

Query: 242 --------FDNVYLEENFHGSMLDRWIKINRSTSKENLELVAVSYWAIWNDRNKIV-HGE 301
                   + N+Y   N  G+   +W K +        +LV    W +W +RN++V  G 
Sbjct: 329 GGEWADSIYVNLYWVFNL-GNGNPQWEKAS--------QLVPWLLWRLWKNRNELVFRGR 388

Query: 302 EIPSINFRSKWITEYLEKFRQMNPKEDARSMIPQRSDRIASRLTACWKVPPSGFWKLNCD 361
           E  +     +   + LE++R     E   +  PQ +     R    W+ PP  + K N D
Sbjct: 389 EFNAQEVLRR-AEDDLEEWRIRTEAESCGTK-PQVNRSSCGR----WRPPPHQWVKCNTD 448

Query: 362 AACDPNRQSTSLGIICRNKEG--KAMVANAI-YLDHQLEAH-AAETWAI 379
           A  + + +   +G + RN++G  K M A A+  L   LEA   A  WA+
Sbjct: 449 ATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAV 482

BLAST of Lcy13g005870 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.8e-17
Identity = 64/284 (22.54%), Postives = 116/284 (40.85%), Query Frame = 0

Query: 128 VKSGYRLFMQEKLNGISSSNSP--MSNIWSSLWKLKIPNKIKLFCWRALNNSLPNRVNLK 187
           ++SGY +   E L    +   P   + +  ++WKL +  KIK F WR +  +L     L+
Sbjct: 6   LRSGYWVATHEDLLEEEAIQPPPGSTEVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLR 65

Query: 188 NIGIDLSTCCPVCNSQEENSDHCLFECKRAYDIWK---LTFDNVYLEENFHGSMLDRWIK 247
           +  ID    C  C  +EE   H +F C     +W+   +   N +   +     L+R I+
Sbjct: 66  SRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQ 125

Query: 248 INRSTSKENLE--LVAVSYWAIWNDRNKIVHGEEIPSINFRS-KWITEYLEKFRQMNPKE 307
           ++++ +  +L+  L     W +W  RN  +  ++  S ++ + K I +  E        E
Sbjct: 126 LSKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTE 185

Query: 308 DARSMIPQRSDRIASRLTACWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVA 367
           +    +     + + R ++ W  PP G+ K N D+        T  G   R   G  ++ 
Sbjct: 186 NTNVHVATNPIQTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLC 245

Query: 368 NAIYLDHQLEAHAAETWAIYEGLQRAYSLGCMKLEVESDSNGKI 404
               L     +  AE       LQ  ++ G   +  ESDS   +
Sbjct: 246 GNAKLQSSTCSLHAEALGFLHALQVIWAHGLRYVWFESDSKSLV 289

BLAST of Lcy13g005870 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-15
Identity = 62/261 (23.75%), Postives = 108/261 (41.38%), Query Frame = 0

Query: 151 SNIWSSLWKLKIPNKIKLFCWRALNNSLPNRVNLKNIGIDLSTCCPVCNSQEENSDHCLF 210
           + I + +WKLK   KIK F W+ L+ +L    NLK   I     C  C  ++E S H  F
Sbjct: 12  AEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFF 71

Query: 211 ECKRAYDIWKLTFDNVYLEENFHGSMLDRWIKINRSTSKEN-----LELVAVSYWAIWND 270
           +C  A  +W+ +    + E    G  ++  +++  S+   N       L     W +W  
Sbjct: 72  DCFYAQQVWRAS-GIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKS 131

Query: 271 RNKIVHGEEIPSINFRSKWITEYLEKFRQMNPKEDARSMIPQRSDRIAS-------RLTA 330
           RN++V  ++  S      W          +   ED  + +   + ++ S           
Sbjct: 132 RNQLVFQQKSIS------WQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMART 191

Query: 331 CWKVPPSGFWKLNCDAACDPNRQSTSLGIICRNKEGKAMVANAIYLDHQLEAHAAETWAI 390
            W+ PPS + K N D A +   ++   G + R++ G  M +         ++  +E  A+
Sbjct: 192 KWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQAL 251

Query: 391 YEGLQRAYSLGCMKLEVESDS 400
              +Q A+S G  K+  E DS
Sbjct: 252 IIAMQHAWSQGYRKVIFEGDS 265

BLAST of Lcy13g005870 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 62.4 bits (150), Expect = 9.7e-10
Identity = 24/64 (37.50%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 1   MKSIYYNNSNILEADLGRKPSFLWRSLLWGRDLLAKGLRKRIGNGETTAMFRDPWLPKEL 60
           ++S Y+ +S+++E  +G +PS+ WRS++ GR+LL++GL + IG+G  T ++ D W+  E 
Sbjct: 89  LRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDET 148

Query: 61  TFKP 65
              P
Sbjct: 149 PLPP 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932951.4e-0837.50Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DX301.6e-7637.41uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803QJ224.3e-5832.25Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P2K38.2e-5730.66Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QQT21.8e-5633.75Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P9P51.8e-5632.90Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022158377.13.3e-7637.41uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030508852.11.4e-5835.56uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_024038343.12.9e-5634.34uncharacterized protein LOC112097373 [Citrus clementina][more]
XP_030502765.16.4e-5634.44uncharacterized protein LOC115717936 [Cannabis sativa][more]
XP_006491472.18.4e-5632.51uncharacterized protein LOC102626455 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT3G09510.11.7e-3828.99Ribonuclease H-like superfamily protein [more]
AT4G29090.14.5e-3128.61Ribonuclease H-like superfamily protein [more]
AT2G02650.12.8e-1722.54Ribonuclease H-like superfamily protein [more]
AT3G25270.14.5e-1523.75Ribonuclease H-like superfamily protein [more]
ATMG00310.19.7e-1037.50RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 326..403
e-value: 1.9E-8
score: 36.4
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 126..219
e-value: 4.6E-20
score: 72.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 331..399
e-value: 4.4E-12
score: 45.9
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 27..399
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 27..399
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 330..399
e-value: 1.03242E-10
score: 56.9388
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 326..400

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g005870.1Lcy13g005870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity