Lcy13g005690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g005690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	iron-sulfur assembly protein IscA-like 1, mitochondrial
Location	Chr13: 4890185 .. 4892611 (+)
RNA-Seq Expression	Lcy13g005690
Synteny	Lcy13g005690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAATGAACCTTCGCGAGTGTATTTGCAGAGGAGAAAATCGATAGGCAGCAGGAGGATCCAGAGAAAATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTAACGGAGGCCGCTGCCGCTCGAATTCGACAACTTCTTCAACAGCGCCAACGTTCATTCCTTCGCCTAGGCGTCAAGGCTCGCGGCTGCAATGGCTTGTCCTACACTCTGAACTATGCAGGTTCGTTAATACCTATTGAATTTCAACCTTTTCTTGATTGTATGCGATTGTTTTTTACTCATTTTACGTCTAAATTGAAGGATGCGATGGAATTTGTCGATTGTTTATCCTCTTTTCTTTGAATCGGATGTTGCTGCTTCGATTTAATTCGAGATTAATAGGCAGTTGATGTGTTTGAGTGATATGACCTAACTGTAAAGAGGAGATGTTTTGAAATTGGAGAAACTGGAGTCCTCTAGAAGATGGATTCTTGATATTTTAACTGTTTCCAGTTCTAGTTACCAATAATTACGATGTTAAGGCCGAGGATTTATTATGATGATAATTTGAAGGTTAAATGATTCTGTAATTGTGATGAACCGGAATTGGGCATGGGTATGATATGTAAGTTGTTCGAAGATGAGCTGTTGAGTTCTTGCCAACCTTAACAAACGACAACTCTGAAAGATTAAACTGACATGCCTGAATGCTTAAGTCGGTAGATTAGAGATGATTTACATACAGGGGCCTATGTATGAGAGGTGAATTAACTTAACTAATAGTTGAGTCTGTAAATCCTGGATCTTATAGAGTTAGTTATGAATCAATGGTGTTATGCGACAGGAAGTTTGGATCCAACGATTTACTCCACAAACTTATGACATAGGGATGTGTGTGTATTAACGTATCGCAATCCCAGACTAAATACACGTTCTACCAAATTTATGGTGAACATGTACTTCCATCATGTACCATTTACTTTGCGGTGTAGGTTGGCAGTTGTGAGACCATTGCAGAACTGGACATTGATTAAATTCTAATTGGGAGCCTTCGTCTTTCTCTGTCCTAATATGGTTAATTAGAATGTTATTGGACAAGAACTGCTGTTTCTGTTCAATTAGAAGATAAATGGGTTAGAACTTAGAAGCCTTCCATGTGTCGAACTTGGAAAGAATAGTTATTAACATGTTAGATGGTCAGAAGTCGGAGATTTCATACAATTTCTGGCTAGGGACTTCTTATTGTTTGTGTTTATTTAATGACTATCTTCTCAGTTAACAGTATTTACTATTCAGTTTTCTATGTTGCTCATGATTGGAGAATTTCCTAGCTCAGCATTACCTTAGTTTTATAATCACATTATCAATAAATACCAGTTATTTTCATCGGGTGAGAAAGGATGCAGCCTTTATCTCTCTTTTGACATAGATGGACTGCAATTGTGATCTCTATCTTTTGAAATAGTTCACGATTGCAGAATTTCATATTAAAGTTTTATTTTTTCAAATATTTCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAGACGTGAAGATATTGATTGATCCAAAGGCTCTGATGCATGTAATAGGAACAAAGATGGACTTTGTAGATGACAAACTGAGGTATTTGAGAAATCTCTCACCTCAATTTTATATTTTCAGCTCTATTTTCATCCATGTGTTGAGGAAATATCCCGCTTGTTAGTTTCAACATCAGACAGACATAAAAGCTTTTATCATGGCTCCTCAGAACCGCTACTTTGTTATTCCAGAGTCCGAACATATTTTAATAGGTTTTAATCAGCTGTGAGCTAGCTCCATTCTGAATTTGCTTGTCAATCAATTTGCTATAGTGCTGGTGGTATTTGCGACATACAAGGATCACATCATTCATTTGCATAATCTTTATCTTGAGTCTCGACATTGAATCAAATTCAACCTTTTATCCCCTGTACTGCTATATTCAATAGCCAATGGGACTTATTCTTTGTCTCTCTTCTTGGTAGATCTGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACGACAGGCAGTGCAGAAGCCAACAAAAAGTGAAGCAGTTCGAGCAATGAGCACGGTTCGAAACACTCAATCTCAAAGTTGCTGATTTGTTGTGTATTTTGCTGAGAATACAAGGACAATAACCAAGAGAGTTCTCTGACAAGAACTTAAAACAGTTGTAAGAATGTTTCAATATGGCTAATTATATTCTTAGGAAGCCAGTTAAACACTGTACTCTGCTAATTATTTTGTTTCCTTTTGTATGTATATGATTGTAGACTGCACTGGCTATAATGAATTCTGAGGTAATAAAATTCTCCCACAACTTTCTTTTGTTCCA

mRNA sequence

AGTAAATGAACCTTCGCGAGTGTATTTGCAGAGGAGAAAATCGATAGGCAGCAGGAGGATCCAGAGAAAATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTAACGGAGGCCGCTGCCGCTCGAATTCGACAACTTCTTCAACAGCGCCAACGTTCATTCCTTCGCCTAGGCGTCAAGGCTCGCGGCTGCAATGGCTTGTCCTACACTCTGAACTATGCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAGACGTGAAGATATTGATTGATCCAAAGGCTCTGATGCATGTAATAGGAACAAAGATGGACTTTGTAGATGACAAACTGAGATCTGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACGACAGGCAGTGCAGAAGCCAACAAAAAGTGAAGCAGTTCGAGCAATGAGCACGGTTCGAAACACTCAATCTCAAAGTTGCTGATTTGTTGTGTATTTTGCTGAGAATACAAGGACAATAACCAAGAGAGTTCTCTGACAAGAACTTAAAACAGTTGTAAGAATGTTTCAATATGGCTAATTATATTCTTAGGAAGCCAGTTAAACACTGTACTCTGCTAATTATTTTGTTTCCTTTTGTATGTATATGATTGTAGACTGCACTGGCTATAATGAATTCTGAGGTAATAAAATTCTCCCACAACTTTCTTTTGTTCCA

Coding sequence (CDS)

ATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTAACGGAGGCCGCTGCCGCTCGAATTCGACAACTTCTTCAACAGCGCCAACGTTCATTCCTTCGCCTAGGCGTCAAGGCTCGCGGCTGCAATGGCTTGTCCTACACTCTGAACTATGCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAGACGTGAAGATATTGATTGATCCAAAGGCTCTGATGCATGTAATAGGAACAAAGATGGACTTTGTAGATGACAAACTGAGATCTGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACGACAGGCAGTGCAGAAGCCAACAAAAAGTGA

Protein sequence

MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTTGSAEANKK

Homology

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BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot
Match: Q8LBM4 (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-53
Identity = 100/132 (75.76%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 5   SSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YADEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGCGE
Sbjct: 63  YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGE 122

Query: 125 SFMTTGSAEANK 137
           SFMTT ++ A +
Sbjct: 123 SFMTTSTSSAKQ 134

[Close]

BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot
Match: Q8L8C0 (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 2.7e-41
Identity = 80/109 (73.39%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 21  RRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQD 80
           R+Q+L L++ AAARIRQLLQ +Q+ FLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ 
Sbjct: 2   RKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKG 61

Query: 81  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
           VKIL+DPKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 62  VKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

[Close]

BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot
Match: Q07821 (Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ISA1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 21  RRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQD 80
           R+ ++TL+  A   +R LL Q +   +R+  + RGC+GL+Y L Y  E GKFDE+VE   
Sbjct: 143 RKALITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDG 202

Query: 81  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFM 128
           VKI+ID KAL  +IG++MD++DDKL S+F+F NPNSKG CGCGESFM
Sbjct: 203 VKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249

[Close]

BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot
Match: Q54VS1 (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=isca1 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 55/118 (46.61%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 15  KVGPAARRQILTLTEAAAARIRQLLQQRQRS---FLRLGVKARGCNGLSYTLNYADEKGK 74
           K+G  +++ I ++T++A  R+++++  ++      LRLG+K RGC+G+SYTL++A +K K
Sbjct: 8   KLGKPSKKAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKNK 67

Query: 75  FDE-LVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMT 129
           FDE +V D+D+ I++D KAL+ VIGT+MD++++ ++ EFIFINPN+   CGCGESF T
Sbjct: 68  FDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125

[Close]

BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot
Match: Q8T3X9 (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster OX=7227 GN=MagR PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.4e-27
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 22  RQILTLTEAAAARIRQLLQQRQRSF-LRLGVKARGCNGLSYTLNYADEKGKFDELVEDQD 81
           R  LTLT AA  RI+ LLQ +     L++GV+ RGCNGLSYTL+YA +K K DE V    
Sbjct: 23  RAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYTLDYASQKDKLDEEVVQDG 82

Query: 82  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESF 127
           VK+ ID KA + ++GT+MDFV+ KL SEF+F NPN KG CGCGESF
Sbjct: 83  VKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGCGESF 128

[Close]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL
Match: A0A6J1JJH4 (iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484969 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 19  MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 78

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 79  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 138

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 139 GCGESFMTTGSAEANKK 155

[Close]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL
Match: A0A6J1D9T8 (iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018687 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAAS+KVGPAARRQ+LTLTEAAA RIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASKKVGPAARRQVLTLTEAAAERIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQDVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQDVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 121 GCGESFMTTGSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL
Match: A0A5A7SVZ7 (Iron-sulfur assembly protein IscA-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001970 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQK GPA RRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTT SAEANKK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL
Match: A0A0A0KTF0 (Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G614650 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQK GPAARRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTT SAEANKK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL
Match: A0A6J1GZ87 (iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458498 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 121 GCGESFMTTGSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. NCBI nr
Match: XP_038891787.1 (iron-sulfur assembly protein IscA-like 1, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 121 GCGESFMTTGSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. NCBI nr
Match: XP_022987453.1 (iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 19  MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 78

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 79  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 138

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 139 GCGESFMTTGSAEANKK 155

[Close]

BLAST of Lcy13g005690 vs. NCBI nr
Match: KAG7032017.1 (Iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.3 bits (656), Expect = 7.5e-65
Identity = 133/137 (97.08%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 19  MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 78

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDF+DDKLRSEFIFINPNSKGQC
Sbjct: 79  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFIDDKLRSEFIFINPNSKGQC 138

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 139 GCGESFMTTGSAEANKK 155

[Close]

BLAST of Lcy13g005690 vs. NCBI nr
Match: XP_022150583.1 (iron-sulfur assembly protein IscA-like 1, mitochondrial [Momordica charantia])

HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSFFAAAS+KVGPAARRQ+LTLTEAAA RIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASKKVGPAARRQVLTLTEAAAERIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQDVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQDVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 121 GCGESFMTTGSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. NCBI nr
Match: XP_022956980.1 (iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAASSSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLS 60
           MAASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQR FLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQ+VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEANKK 138
           GCGESFMTTGSAEANKK
Sbjct: 121 GCGESFMTTGSAEANKK 137

[Close]

BLAST of Lcy13g005690 vs. TAIR 10
Match: AT2G16710.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 208.0 bits (528), Expect = 4.8e-54
Identity = 100/132 (75.76%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 5   SSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YADEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGCGE
Sbjct: 63  YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGE 122

Query: 125 SFMTTGSAEANK 137
           SFMTT ++ A +
Sbjct: 123 SFMTTSTSSAKQ 134

[Close]

BLAST of Lcy13g005690 vs. TAIR 10
Match: AT2G16710.3 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 201.4 bits (511), Expect = 4.5e-52
Identity = 100/138 (72.46%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 5   SSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YA------DEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKG 124
           YA      DEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLRSEF+FINPNS+G
Sbjct: 63  YAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQG 122

Query: 125 QCGCGESFMTTGSAEANK 137
           QCGCGESFMTT ++ A +
Sbjct: 123 QCGCGESFMTTSTSSAKQ 140

[Close]

BLAST of Lcy13g005690 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 169.5 bits (428), Expect = 1.9e-42
Identity = 80/109 (73.39%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 21  RRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQD 80
           R+Q+L L++ AAARIRQLLQ +Q+ FLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ 
Sbjct: 2   RKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKG 61

Query: 81  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
           VKIL+DPKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 62  VKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

[Close]

BLAST of Lcy13g005690 vs. TAIR 10
Match: AT2G16710.2 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-39
Identity = 78/102 (76.47%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 5   SSSFFAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRSFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YADEKGKFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLR 107
           YADEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLR
Sbjct: 63  YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLR 104

[Close]

BLAST of Lcy13g005690 vs. TAIR 10
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 11  AASQKVGPAAR--RQILTLTEAAAARIRQLLQQRQRSF-LRLGVKARGCNGLSYTLNYAD 70
           +AS    PA    +  ++L+E A   + ++  +R     LR+GVK  GC+G+SYT+++ +
Sbjct: 56  SASVPAAPAMEGLKPAISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFEN 115

Query: 71  EKG--KFDELVEDQDVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 127
                  D  +E Q   I+ DPK+++ + G ++D+ D  +   F F NPN+   CGCG+S
Sbjct: 116 RANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNATQTCGCGKS 175

The following BLAST results are available for this feature:

BLAST of Lcy13g005690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBM4	6.8e-53	75.76	Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q8L8C0	2.7e-41	73.39	Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q07821	7.6e-28	54.21	Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
Q54VS1	3.8e-27	46.61	Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideu...	[more]
Q8T3X9	6.4e-27	58.49	Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster...	[more]

BLAST of Lcy13g005690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJH4	2.8e-65	97.81	iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A6J1D9T8	1.1e-64	96.35	iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Momordica charantia O...	[more]
A0A5A7SVZ7	4.0e-64	96.35	Iron-sulfur assembly protein IscA-like 1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KTF0	4.0e-64	96.35	Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G614650...	[more]
A0A6J1GZ87	4.0e-64	96.35	iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Cucurbita moschata OX...	[more]

BLAST of Lcy13g005690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891787.1	2.0e-65	98.54	iron-sulfur assembly protein IscA-like 1, mitochondrial isoform X1 [Benincasa hi...	[more]
XP_022987453.1	5.7e-65	97.81	iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita maxima]	[more]
KAG7032017.1	7.5e-65	97.08	Iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita argyrosperma ...	[more]
XP_022150583.1	2.2e-64	96.35	iron-sulfur assembly protein IscA-like 1, mitochondrial [Momordica charantia]	[more]
XP_022956980.1	8.3e-64	96.35	iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita moschata]	[more]

BLAST of Lcy13g005690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16710.1	4.8e-54	75.76	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.3	4.5e-52	72.46	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	1.9e-42	73.39	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.2	4.4e-39	76.47	Iron-sulphur cluster biosynthesis family protein	[more]
AT1G10500.1	1.2e-12	33.06	chloroplast-localized ISCA-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 25..124 e-value: 2.1E-21 score: 76.2
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 24..130 e-value: 1.2E-34 score: 120.7
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 24..117
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 25..127 e-value: 4.7E-35 score: 118.0
None	No IPR available	PANTHER	PTHR10072:SF60	IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL	coord: 1..136
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 1..136
IPR017870	FeS cluster insertion, C-terminal, conserved site	PROSITE	PS01152	HESB	coord: 109..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g005690.1	Lcy13g005690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051536	iron-sulfur cluster binding