Lcy13g005680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g005680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DUF2996 family protein
Location	Chr13: 4876964 .. 4880138 (+)
RNA-Seq Expression	Lcy13g005680
Synteny	Lcy13g005680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGTGTGGATGACAAAAATCCGTGCGCTTCGTCTCTGTAACGCAGAATGAGAAGCATTCCCTTTGCCGTTGTTGTCAACTGCCTCACACCAACGATTCACCTCTAATCTTCACTATCAAAGTTTTCAAAACTCAACCAAGATTGTTGCTCTGTAATCTTCTCTGCAAGTTCAATCCCTCTCCTCGGTAGAGTTTCACATGGCAATGATTCTCAAAGGAGGAGGCGGAATCGGAGTTTCAACTGCTGCTTATTTTCCTCAGAATTCCAAGCCTTCCCCGATTTTCTCGGTTCACACGGTACGATTCCACGTTTTGTTCTGATTTCGATTCCGATTCTAACTCCAGTTCCGGTTCTTTAGTTTGTTATTCGTGTCAATTGATTCTTGTTTTGGTTCTGTTGTGTTCAGACGTACAATTTATTCCTGACTCGAGTGCACTTTAATTGTTATACCTTTTTTTCTAGTTTCGTATTCTCTTTTAACACAGTTCTTGAGGAACTGGTGGTTGATTTTACTTGGTTGAGTATGAGTTATTCTGACTGTGACTGAGGTGCTTGAGTAAAAAGAAAGGAAAGGAAAAGAGGAAAGTGACGCTTAGAAATCCTTCCAGAATCTTCATGTTCGTTAGTTTTGGTTTGTGAAATTTCAATGTGCACCGATAGAATAGCAGCATAATTTGGAATTGTAGTGCCAACATAAAGCAGTTCCGAGAAGAGAAAGATACCATAAGAACTTTGAAATGTTCTGTGCTTTTAACTATTTCAGTGATTGAATTCATTAAATCACTGCTGAGCCCGAAAACTTAAGTTGATGAGTTTTGATAAATTTAATTATTAATTCTTCATATCCATTACGTTCCTCCTTACCTGTGGCTTGGAACTTAGCACAAGGTCCAACAAGTGATTATTAATATTAATTGGAGAGTAAATGACACTATAAGGATTCGAATTTAGATCTCCCGCTCTATATCATTCTAAATCAAAATTGAACTTAAAAGTAGGTCGATGGATGGTGGTAAATTTAATAATCAATTCATATTCTTAACGAGTTCAGTCTTTATTTTTTATTTTATCATTATTATTTTGTGATCTTCACTCCTGTTTCAATTGGGGGCCGAGTATGTTCGAGAGAGAAAAAGGAAGAGGAGATACCGTTAGTAGAGAAAAAAAAAATCTATGAGAGCTTGAAATGGACCCATGAGAGGAAGGTAATCATACCCTTCACTTACTCCCCTGAATAGGAAGTTGAAGATTATGAGCCTGTTTGAAATGACTTTCTAAGTATTTAGAAATAGAGTTTTTGCACTTAAAAAGGTAGCGGTTTTATATATATATATATATATATATATATATATATATATATATATATATTAAGAATACTACATTAAGAGGATTTGAACCTAAGATATGAGGGAAGGCACTTATGCCTGACCATGTTGCTCAAGTCGGTGATATTGATATGATAGGTAGTTGTGGCAAAGGGAATCATAATAGTTGAGCCATAACTTCTGTAGTAGCTATCTGTCTTTTTCTTTGATTGTTTCTAGAAATAAAATTTTTCTTCCACTTGTGATGTTGTCTTCCTGCCATACCAGAAGAACGATGAATTCAAATCACTTAAAAGAAAACGAAAAGGTCTAACCACTACTTTGGTGTATACATAAATGTTCTGAAGCAATTGACTAATAGTATCACCTAGCTTTTATGGTTATGGTTGAAATCTATTATCACTGTTTCTCTTTACGGATAGCATCCCACTCTTTTCATATTATATATATCTTATTTTTTAATATCCATGAATGTTCAGACCAACTTACATGTACCTCAACTGATCTCACGAGATGACCGTCTAGCTCTATTATCATATTATAATTTTAGTTAAGAAAAAGAGTAGATATAACTTCTTCCAAATAAATTTGACTTGTGCAGGCGGTACACAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACTTTGCAAGAATCATCTACTCCAACAGGTTAGTTGCTGACAAGTTTTTCAAAGTACATCCATTGAAAGATTGACAATGTGGCCCCAATATTTTCTGTCAATATTTTTTCTCTTTCAAATGAAAAGGGTTAGGCTTTGGTTCATTTATTTCTTTCTGCTTTGTTTTTTAATACTCAATTCATGGCATCTGTTAAAATTGAAGTCTTTTCTATCAGTTGCTGCTGAGCCAAAGGAGATAAAGACAGTTCAGAAGGAAACTCCAGCAAAGTCCAAACCACCAGCAAAAGCGCCAGCCAAGCCACTGCCTGAGTTGATGGAGGAGGATGTCATACCTTCACTGAAAGCAATACTCGAAGCGCAAGCCGATGTCTCCGATATCGGATTATCGTTCCAAGACGACAGAGTTAGTTTCTCCCCTCTGAATTCTCGTTCATTCATAAACTCTTAGCTTGGCCTCATTGAATTTGGATTATCGCAGTTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTACTTAAAAATTCTTAGAGAATGCAATTATTTTGTCATTGTCAAGTCAATTTTCATCACCCTTTAACTTCTGGTGTTCACTACCTTTGGTTAAGAACAAAATATGATGAATGTAAGTAAGAACTAATTATCAACAATCAGTCAAACAGTGATTATCTCGATGCCAAAACCCGACCCGTCGACGCGAAAAGAAAAGGAAACAACATCTAAACTCAATGTCTGATCTTCTTGAATGGTTGAATCATGAGCAGGTCCAAAAGGATTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTCTGGTGGATGAGAAGAAAGTCACAGCAAAGCTTTTAGTGTTTTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAAGACTAATCAACACAATGATTTTTTTTCCCTTTTTTTTTTTTTTGGGTGGGGCTTCTTGTCAAATGATGTATAGCATAATTCTCCATTCTATTTGCATTGCTCCTTCAACAATATGTCAACTGATCCTATGAAATGTATCAACTTTTTAGTCCCAGAAAATAATCTTTTCCCTTTTTCTAATATTTAGGAACTTGATGAAATCCTTACATAGTAGAATGTAGGTTAAAAATCACTTCGATCTCTGAACTTTCATAA

mRNA sequence

AGCGTGTGGATGACAAAAATCCGTGCGCTTCGTCTCTGTAACGCAGAATGAGAAGCATTCCCTTTGCCGTTGTTGTCAACTGCCTCACACCAACGATTCACCTCTAATCTTCACTATCAAAGTTTTCAAAACTCAACCAAGATTGTTGCTCTGTAATCTTCTCTGCAAGTTCAATCCCTCTCCTCGGTAGAGTTTCACATGGCAATGATTCTCAAAGGAGGAGGCGGAATCGGAGTTTCAACTGCTGCTTATTTTCCTCAGAATTCCAAGCCTTCCCCGATTTTCTCGGTTCACACGGCGGTACACAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACTTTGCAAGAATCATCTACTCCAACAGTTGCTGCTGAGCCAAAGGAGATAAAGACAGTTCAGAAGGAAACTCCAGCAAAGTCCAAACCACCAGCAAAAGCGCCAGCCAAGCCACTGCCTGAGTTGATGGAGGAGGATGTCATACCTTCACTGAAAGCAATACTCGAAGCGCAAGCCGATGTCTCCGATATCGGATTATCGTTCCAAGACGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGATTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTCTGGTGGATGAGAAGAAAGTCACAGCAAAGCTTTTAGTGTTTTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAAGACTAATCAACACAATGATTTTTTTTCCCTTTTTTTTTTTTTTGGGTGGGGCTTCTTGTCAAATGATGTATAGCATAATTCTCCATTCTATTTGCATTGCTCCTTCAACAATATGTCAACTGATCCTATGAAATGTATCAACTTTTTAGTCCCAGAAAATAATCTTTTCCCTTTTTCTAATATTTAGGAACTTGATGAAATCCTTACATAGTAGAATGTAGGTTAAAAATCACTTCGATCTCTGAACTTTCATAA

Coding sequence (CDS)

ATGGCAATGATTCTCAAAGGAGGAGGCGGAATCGGAGTTTCAACTGCTGCTTATTTTCCTCAGAATTCCAAGCCTTCCCCGATTTTCTCGGTTCACACGGCGGTACACAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACTTTGCAAGAATCATCTACTCCAACAGTTGCTGCTGAGCCAAAGGAGATAAAGACAGTTCAGAAGGAAACTCCAGCAAAGTCCAAACCACCAGCAAAAGCGCCAGCCAAGCCACTGCCTGAGTTGATGGAGGAGGATGTCATACCTTCACTGAAAGCAATACTCGAAGCGCAAGCCGATGTCTCCGATATCGGATTATCGTTCCAAGACGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGATTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTCTGGTGGATGAGAAGAAAGTCACAGCAAAGCTTTTAGTGTTTTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAAGACTAA

Protein sequence

MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAAEPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD

Homology

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BLAST of Lcy13g005680 vs. ExPASy TrEMBL
Match: A0A6J1JE31 (uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.3e-94
Identity = 179/194 (92.27%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGGGIGVSTA YFPQNSKPSP+FSVHT VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLLAERRVICCSTLQESSTPTVSA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIK VQKE PAK KPPAKAP KPLP++MEEDVIPSLKAILEAQADV+DI LSFQDDR
Sbjct: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE
Sbjct: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 193

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BLAST of Lcy13g005680 vs. ExPASy TrEMBL
Match: A0A6J1GX25 (uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC111458230 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.3e-94
Identity = 179/194 (92.27%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGGGIGVSTA YFPQNSKPSP+FSVHT VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLPAERRVICCSTLQESSTPTVSA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIK VQKE PAK KPPAKAP KPLP++MEEDVIPSLKAILEAQADV+DI LSFQDDR
Sbjct: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE
Sbjct: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 193

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BLAST of Lcy13g005680 vs. ExPASy TrEMBL
Match: A0A0A0KUS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.4e-93
Identity = 175/194 (90.21%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGG GIGVSTA YFP N KPSP+FS+H  VHKLAAERKVICCSTLQESSTPTVAA
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIKTV KE PAK+KPPAKAP KPLPELM+E+VIPSLKAILEAQADVSD+ LSFQDDR
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+ KL+VFWIE
Sbjct: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 194

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BLAST of Lcy13g005680 vs. ExPASy TrEMBL
Match: A0A5A7SZ21 (DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001950 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.6e-90
Identity = 174/195 (89.23%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFP-QNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVA 60
           MAMILKGG G+GVSTA YFP  N KPSP+FS+H  VHKLAAERKVICCSTLQESSTPTVA
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA 60

Query: 61  AEPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDD 120
           AEPKEIKTV KE PAK+KPPAKA  KPLPELMEE+VIPSLKAILEAQADV DI LSFQDD
Sbjct: 61  AEPKEIKTVPKEAPAKAKPPAKAAVKPLPELMEEEVIPSLKAILEAQADVYDIELSFQDD 120

Query: 121 RLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWI 180
           RLDGSFLK+GVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+AKL+VFWI
Sbjct: 121 RLDGSFLKDGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSAKLIVFWI 180

Query: 181 EKRLAAQGIIPVWKD 195
           EKRLAAQGIIPVWKD
Sbjct: 181 EKRLAAQGIIPVWKD 195

[Close]

BLAST of Lcy13g005680 vs. ExPASy TrEMBL
Match: A0A1S3BGH0 (uncharacterized protein LOC103489386 OS=Cucumis melo OX=3656 GN=LOC103489386 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.6e-90
Identity = 174/195 (89.23%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFP-QNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVA 60
           MAMILKGG G+GVSTA YFP  N KPSP+FS+H  VHKLAAERKVICCSTLQESSTPTVA
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA 60

Query: 61  AEPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDD 120
           AEPKEIKTV KE PAK+KPPAKA  KPLPELMEE+VIPSLKAILEAQADV DI LSFQDD
Sbjct: 61  AEPKEIKTVPKEAPAKAKPPAKAAVKPLPELMEEEVIPSLKAILEAQADVYDIELSFQDD 120

Query: 121 RLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWI 180
           RLDGSFLK+GVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+AKL+VFWI
Sbjct: 121 RLDGSFLKDGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSAKLIVFWI 180

Query: 181 EKRLAAQGIIPVWKD 195
           EKRLAAQGIIPVWKD
Sbjct: 181 EKRLAAQGIIPVWKD 195

[Close]

BLAST of Lcy13g005680 vs. NCBI nr
Match: XP_038891519.1 (uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.4e-95
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGG GIGVSTA YFP NSKPSP+FS+HT VHKLAAERKV+CCSTLQESSTPTVAA
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSLHTMVHKLAAERKVVCCSTLQESSTPTVAA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIKTV KE PAK+KPPAKAP KPLPELMEEDVIPSLKAILEAQADVSDIGLSFQD+R
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDNR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSFLKNGVPY+FWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKL+VFWIE
Sbjct: 121 LDGSFLKNGVPYTFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWK+
Sbjct: 181 KRLAAQGIIPVWKN 194

[Close]

BLAST of Lcy13g005680 vs. NCBI nr
Match: XP_022986445.1 (uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharacterized protein LOC111484155 [Cucurbita maxima])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 179/194 (92.27%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGGGIGVSTA YFPQNSKPSP+FSVHT VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLLAERRVICCSTLQESSTPTVSA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIK VQKE PAK KPPAKAP KPLP++MEEDVIPSLKAILEAQADV+DI LSFQDDR
Sbjct: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE
Sbjct: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 193

[Close]

BLAST of Lcy13g005680 vs. NCBI nr
Match: XP_022956513.1 (uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 uncharacterized protein LOC111800345 [Cucurbita pepo subsp. pepo] >KAG7032019.1 hypothetical protein SDJN02_06061 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 179/194 (92.27%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGGGIGVSTA YFPQNSKPSP+FSVHT VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLPAERRVICCSTLQESSTPTVSA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIK VQKE PAK KPPAKAP KPLP++MEEDVIPSLKAILEAQADV+DI LSFQDDR
Sbjct: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE
Sbjct: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 193

[Close]

BLAST of Lcy13g005680 vs. NCBI nr
Match: XP_004135038.1 (uncharacterized protein LOC101205552 [Cucumis sativus] >KGN52187.1 hypothetical protein Csa_009193 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 7.0e-93
Identity = 175/194 (90.21%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGG GIGVSTA YFP N KPSP+FS+H  VHKLAAERKVICCSTLQESSTPTVAA
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIKTV KE PAK+KPPAKAP KPLPELM+E+VIPSLKAILEAQADVSD+ LSFQDDR
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+ KL+VFWIE
Sbjct: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 194

[Close]

BLAST of Lcy13g005680 vs. NCBI nr
Match: KAG6601225.1 (Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 175/190 (92.11%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGGGIGVSTA YFPQNSKPSP+FSVHT VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLPAERRVICCSTLQESSTPTVSA 60

Query: 61  EPKEIKTVQKETPAKSKPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDDR 120
           EPKEIK VQKE PAK KPPAKAP KPLP++MEEDVIPSLKAILEAQADV+DI LSFQDDR
Sbjct: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE
Sbjct: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180

Query: 181 KRLAAQGIIP 191
           KRLAAQGIIP
Sbjct: 181 KRLAAQGIIP 189

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BLAST of Lcy13g005680 vs. TAIR 10
Match: AT2G04039.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). )

HSP 1 Score: 177.9 bits (450), Expect = 7.6e-45
Identity = 108/199 (54.27%), Postives = 131/199 (65.83%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MA I  G  G+  S  +        S +    T       +  + C   LQESST  VA 
Sbjct: 1   MATIAGGSFGVPSSRISITTPTLSSSSLLPPLTLQSGTRKDNLLRC--ALQESSTSAVAT 60

Query: 61  EPKEIKTVQKETPA----KSKPPAKAP--AKPLPELMEEDVIPSLKAILEAQADVSDIGL 120
           E K  +  ++ T A    K KP AKA   AKPL ++MEEDVIP L+AILE+Q D+SDI L
Sbjct: 61  EKKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDL 120

Query: 121 SFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAK 180
           SFQDD+L+G FLK  +PYSFWAFFP G LTG KGFS+SS+G+G S+VEPFLVDE+K TA 
Sbjct: 121 SFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTAN 180

Query: 181 LLVFWIEKRLAAQGIIPVW 193
            +VFW+EKRLAAQGIIPVW
Sbjct: 181 HVVFWVEKRLAAQGIIPVW 197

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BLAST of Lcy13g005680 vs. TAIR 10
Match: AT2G04039.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 93/142 (65.49%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 58  VAAEPKEIKTVQKETPA----KSKPPAKAP--AKPLPELMEEDVIPSLKAILEAQADVSD 117
           VA E K  +  ++ T A    K KP AKA   AKPL ++MEEDVIP L+AILE+Q D+SD
Sbjct: 22  VATEKKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISD 81

Query: 118 IGLSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKV 177
           I LSFQDD+L+G FLK  +PYSFWAFFP G LTG KGFS+SS+G+G S+VEPFLVDE+K 
Sbjct: 82  IDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKP 141

Query: 178 TAKLLVFWIEKRLAAQGIIPVW 193
           TA  +VFW+EKRLAAQGIIPVW
Sbjct: 142 TANHVVFWVEKRLAAQGIIPVW 163

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BLAST of Lcy13g005680 vs. TAIR 10
Match: AT2G04039.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 82/198 (41.41%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 1   MAMILKGGGGIGVSTAAYFPQNSKPSPIFSVHTAVHKLAAERKVICCSTLQESSTPTVAA 60
           MA I  G  G+  S  +        S +    T       +  + C   LQESST  VA 
Sbjct: 1   MATIAGGSFGVPSSRISITTPTLSSSSLLPPLTLQSGTRKDNLLRC--ALQESSTSAVAT 60

Query: 61  EPKEIKTVQKETPA----KSKPPAKAP--AKPLPELMEEDVIPSLKAILEAQADVSDIGL 120
           E K  +  ++ T A    K KP AKA   AKPL ++MEEDVIP L+AILE+Q D+SDI L
Sbjct: 61  EKKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDL 120

Query: 121 SFQDDRLDGSFLKNGVPYSFWAFFPNG-LTG-PKGFSLSSYGNGGSSVEPFLVDEKKVTA 180
           SFQDD+L+G FLK  +PYSFWAFFP G LTG  K F     G   +    FL        
Sbjct: 121 SFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGEQKDFQFPHTGQVRAPWNHFLSTRGNQLR 180

Query: 181 KLLVFWIEKRLAAQGIIP 191
             L F     L  +G  P
Sbjct: 181 TTLCFGSRSVLLHKGSSP 196

The following BLAST results are available for this feature:

BLAST of Lcy13g005680 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy13g005680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JE31	5.3e-94	92.27	uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155...	[more]
A0A6J1GX25	5.3e-94	92.27	uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A0A0KUS0	3.4e-93	90.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1	[more]
A0A5A7SZ21	4.6e-90	89.23	DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3BGH0	4.6e-90	89.23	uncharacterized protein LOC103489386 OS=Cucumis melo OX=3656 GN=LOC103489386 PE=...	[more]

BLAST of Lcy13g005680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891519.1	3.4e-95	92.27	uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida]	[more]
XP_022986445.1	1.1e-93	92.27	uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharac...	[more]
XP_022956513.1	1.1e-93	92.27	uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 unchar...	[more]
XP_004135038.1	7.0e-93	90.21	uncharacterized protein LOC101205552 [Cucumis sativus] >KGN52187.1 hypothetical ...	[more]
KAG6601225.1	1.1e-90	92.11	Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Lcy13g005680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04039.1	7.6e-45	54.27	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]
AT2G04039.2	2.1e-42	65.49	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]
AT2G04039.3	1.1e-22	41.41	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021374	Protein of unknown function DUF2996	PFAM	PF11210	DUF2996	coord: 84..186 e-value: 3.4E-13 score: 50.1
IPR021374	Protein of unknown function DUF2996	PANTHER	PTHR36341	DUF2996 FAMILY PROTEIN	coord: 15..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g005680.1	Lcy13g005680.1	mRNA