Lcy13g005330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g005330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DNA repair REX1-B protein
Location	Chr13: 4565193 .. 4568305 (-)
RNA-Seq Expression	Lcy13g005330
Synteny	Lcy13g005330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAGTAAAAAGCCCAAAAACAACAGAAAAAACATCTAAAAAGAAAAAGGAAAAAAAAAGAAGAAGATTATTTCTAGTTAAATAGCAGTCGGACATGGAGGCTTTAAGTTGAAGACTGAAGCTGAAGGGAAGCGCCCTAAAGAATGGAAGATTTTGATGAGAAGCTCTCTCTGGCTGAACAAATGGAGGAAGATGAAAGAACCGATGCCAGCGATTCCTCTAACACTCTCACTTTGCTCCGTAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAAAGGTAGCATTGATTTGATTTTCCTTTGAAATCTTGTTCGTTGTTTTTGAAAATCAATGAAGAATTCGATGGCTCGAGTAATGAGTATGCGTGTTTCTGTTACAGTTTTTTCATGTCGCTGGATTTTGTCCTAAATCAGGTTTTAGATACGTTTTCTTTCATAATGATTCCATACAGATCGATCATTAGAAAATCAAGCTCAAAGAATTTTTGTTAGACCTAAATGAACTTAGCGACAAAGTTTTGAGCGTGTTGCTGCTGCTCTACTTGTTTATACGAGTTAGGTGGGATCTTGGAAGTGTTCATTATTCTGCTAATTCGCAGGGGCTTCGACGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCGGAATTCAGTAATTGCTCCAAACAAGTTCGTTATTCAATTTCACAGCATTTCGTTGAGGCGTAGTCTTCTTTGAGCTTCCTTGTGTGATTTTCCTTTTTGGACTCTCTTTTATTGTAGGTCATTGACATTGAGTCGAATTTCCGGAGTCCAGATTATAGCAGGCTCGAGCTAGCCAATCTGCTTAGATCTGTTCAAGAACAGGAAAAGCAGAAATTGCATCTGGTATGCCACGTCTAGAAAGTTTCGATTTATTTTCAATTTCAAGCATCCTTTCCTCCTCTGCAAAGAATAAGTTTGACGAGTTATATTTTAAACTTAGAAACAAATGGCGTGCTTTCACAAAATACCGATTGGTCAGTTAGACGTGTTATTGTAAAATTTGATAGGATTGATCAGTATACGGTATGGAAAATAAGGCTTAAACTTTTGCGCCACGTTAAAACAAGCCTCAAGCCTTACGATTCAAAAGACTTTTGAAACATTGTTCAGATTAATGACTCGCCTGTTGGTAAATCTGGATTCCGTTCTGTAAAGCATTCCTCTAAGCCTTCCTTGATTTTAGAGAATTAGAGAAAGATGACCATTTGTTTCACATTATTCAGCAAGGACAGCCTGGCTATTAATATAGCCAGTGGATTTTAGATTTTTTTTTTTAAGTACAGTACTATCTCTTTTTTGACAGCAAAGGGGGGGTTTTCTTCTGCAGTCGTATAGTATATTTCCTAGTGAAGATGAGCCTCCCATGGTTGCTACATGTAAAATCACAAGTGGCCTATAGATTTGATGTCGAGTCATTCATTATTTCTTTATATTGATATTATTATCAAGTTATGTTTTGGACTTCCTCTTAAATGTTTATGTACCATTCCTATTTTCTTATTGTTGATTCCTTTTAACTTTGCTTTATTGTACAAACATGTTTAGGGTATAAGCAAAAACAAATTTCTATTTTGACATTTTTAGAATAATAAGGTATAAGAAATTAGATAAGAGCAATGGTTGAGAGGAATTTTGACAATCTGAACTGCCTGCAGCTAACTTGTTTTATTTTAACGAATTGCATTTCTAAAAGTTAATCCAAGAAGGGAAATGACTCTACTACAATGTTGTCTACTACACATTCGATGTTAAATCAGTTTTTAAGAAAAAACGAGAAGGAATTTTACAGCTGGAGTAGCACATCAATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTGCCATTAAACTACTGAACTCGATGATGAGTTTTCAGTTACCTGCAGAAGGTCCTCAGTAAAGATACATAGCCTGTCCTTCAATGCTTGCACTAATGCTGTAATTTCCAATGCTAAAAATCAGCACCAGAAATCTGCTCGTCATCTATGACTATGAGTTAGTCAGAAGTTAAGAATGCATATGAATAAGCAAACTAGGAGATAAGACACATAACCCTGTATTTGTGTTGCGGCTACTTTTGCTGGGTAGAAACCTCATTATTTGAAGTTCAATAGTTGAGAGAACTTGCCATTGTATTTTCCTAACAATTATTCCTTTAAAGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAAACACCTCGAGAGCACGAATGTGTGCATGTCCATGAGATAACCGAAGCTTCCGGTACAGAGGAAGCCGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAGGATGCTGTGACGACCATAAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTGATCCTGTGACATATATATGATATTTGAAGCTATCTTGCTCTGCAATTGAATTGGTTATTGAAATGAAATGTACCTGTACAGATATACAGAGTTGGTTCTTGAATAACTTGCATGTGGCGACATAAGGCGAAAGCGAAAATTTTACTTTCGACGCTTTTTTGCTTGATGTTTCACCTTCATTTATGAGATATATCAACTGAATTCTCAGTTTTTAGCACCAAGTTTTGTGTCTCCTCTAGATTGGGAAATAACGCAGTGCCAGTGATTAGGAGAAGGTCAAGAATACTCTTTCAAGATTATGGTACGAGCCTTGAAGCCTTTTTTACCTCGTCTTTTGCTGCATACGGTAATAGTCCTGTCTCTTGCGAAGCACATCGTAACTAGAATTAATGTTATATATGGCCTCAGTGTTCCCGCACCATTAAAATGTCAACAACTAGGAGAGATAAAAAAGTTTTCTCATTTTCTCTCTTCTTCTTTCTTAATTGTCATGATTTTAATGGGATATATAGAGAGATCCCTCTACATACCAGTATGCAGTTAAGTTTTGTTCATTTTATTCCACTCAAATCTCGCAATTTTCTACCATACCTACTTCTACTTGTTCCCTT

mRNA sequence

ATAAAAGTAAAAAGCCCAAAAACAACAGAAAAAACATCTAAAAAGAAAAAGGAAAAAAAAAGAAGAAGATTATTTCTAGTTAAATAGCAGTCGGACATGGAGGCTTTAAGTTGAAGACTGAAGCTGAAGGGAAGCGCCCTAAAGAATGGAAGATTTTGATGAGAAGCTCTCTCTGGCTGAACAAATGGAGGAAGATGAAAGAACCGATGCCAGCGATTCCTCTAACACTCTCACTTTGCTCCGTAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAAAGGGGCTTCGACGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCGGAATTCAGTAATTGCTCCAAACAAGTCATTGACATTGAGTCGAATTTCCGGAGTCCAGATTATAGCAGGCTCGAGCTAGCCAATCTGCTTAGATCTGTTCAAGAACAGGAAAAGCAGAAATTGCATCTGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAAACACCTCGAGAGCACGAATGTGTGCATGTCCATGAGATAACCGAAGCTTCCGGTACAGAGGAAGCCGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAGGATGCTGTGACGACCATAAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTGATCCTGTGACATATATATGATATTTGAAGCTATCTTGCTCTGCAATTGAATTGGTTATTGAAATGAAATGTACCTGTACAGATATACAGAGTTGGTTCTTGAATAACTTGCATGTGGCGACATAAGGCGAAAGCGAAAATTTTACTTTCGACGCTTTTTTGCTTGATGTTTCACCTTCATTTATGAGATATATCAACTGAATTCTCAGTTTTTAGCACCAAGTTTTGTGTCTCCTCTAGATTGGGAAATAACGCAGTGCCAGTGATTAGGAGAAGGTCAAGAATACTCTTTCAAGATTATGGTACGAGCCTTGAAGCCTTTTTTACCTCGTCTTTTGCTGCATACGGTAATAGTCCTGTCTCTTGCGAAGCACATCGTAACTAGAATTAATGTTATATATGGCCTCAGTGTTCCCGCACCATTAAAATGTCAACAACTAGGAGAGATAAAAAAGTTTTCTCATTTTCTCTCTTCTTCTTTCTTAATTGTCATGATTTTAATGGGATATATAGAGAGATCCCTCTACATACCAGTATGCAGTTAAGTTTTGTTCATTTTATTCCACTCAAATCTCGCAATTTTCTACCATACCTACTTCTACTTGTTCCCTT

Coding sequence (CDS)

ATGGAAGATTTTGATGAGAAGCTCTCTCTGGCTGAACAAATGGAGGAAGATGAAAGAACCGATGCCAGCGATTCCTCTAACACTCTCACTTTGCTCCGTAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAAAGGGGCTTCGACGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCGGAATTCAGTAATTGCTCCAAACAAGTCATTGACATTGAGTCGAATTTCCGGAGTCCAGATTATAGCAGGCTCGAGCTAGCCAATCTGCTTAGATCTGTTCAAGAACAGGAAAAGCAGAAATTGCATCTGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAAACACCTCGAGAGCACGAATGTGTGCATGTCCATGAGATAACCGAAGCTTCCGGTACAGAGGAAGCCGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAGGATGCTGTGACGACCATAAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTGA

Protein sequence

MEDFDEKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQDAVTTINEHMEEVRYEIAALEDK

Homology

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BLAST of Lcy13g005330 vs. ExPASy Swiss-Prot
Match: Q9CYZ6 (Required for excision 1-B domain-containing protein OS=Mus musculus OX=10090 GN=Rex1bd PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04
Identity = 35/126 (27.78%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 6   EKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREI-- 65
           E L+ A+     E   A   +   TL+++  ++Q  RA+A+ +L +   +Y+ SG+    
Sbjct: 7   EVLAAADGPGSAESAWAWRDAPIATLVQRIQQLQNERAQAFRRLDQAHRQYLLSGQHYDF 66

Query: 66  -SYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQIQ 125
            SY+ +  E+T  F+  S++V+ +E+    P  ++  LA  +RS+QE E+ +L   A +Q
Sbjct: 67  PSYRSVVHEVTQAFAAASREVLAVEAELAGP-RAQPVLARHVRSLQELEQTRLATVALLQ 126

Query: 126 LLKKAG 129
           ++   G
Sbjct: 127 VMGTPG 131

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BLAST of Lcy13g005330 vs. ExPASy TrEMBL
Match: A0A6J1HYI6 (uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467775 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98
Identity = 195/208 (93.75%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERT--DASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD+KLSLAEQMEED RT  D+S SSNTLTLLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGREISYQQLCGEITAEFSNCSKQVIDIESNF SPD+ R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQ+AVTTINEHMEEVRYEIAALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Lcy13g005330 vs. ExPASy TrEMBL
Match: A0A6J1G147 (uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449729 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98
Identity = 195/208 (93.75%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERT--DASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD+KLSLAEQMEED RT  D+S SSNTLTLLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGREISYQQLCGEITAEFSNCSKQVIDIESNF SPD+ R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQ+AVTTINEHMEEVRYEIAALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

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BLAST of Lcy13g005330 vs. ExPASy TrEMBL
Match: A0A0A0KUN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612270 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 186/206 (90.29%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSG 60
           MEDF++KLSL EQMEED +T   DSSNTL+LLR+FLEIQQRRAEAY+KLKRGFDEYMTSG
Sbjct: 1   MEDFEKKLSLDEQMEEDRKT---DSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSG 60

Query: 61  REISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQ 120
           REISYQQLC EIT EFSNCSKQVIDIESNFRS D++RLELAN LRSVQEQEKQKLHLTAQ
Sbjct: 61  REISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQ 120

Query: 121 IQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180
           IQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEAIK
Sbjct: 121 IQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180

Query: 181 GVQDAVTTINEHMEEVRYEIAALEDK 207
           GVQDAVTTINEHMEEVRYEI ALEDK
Sbjct: 181 GVQDAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of Lcy13g005330 vs. ExPASy TrEMBL
Match: A0A6J1DAT6 (uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018757 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 185/208 (88.94%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MEDFDEKLSLAE--QMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE  +MEED+   A+D SNTL LLRKFLEIQQRRAEAYAKLKRGFDEYMT
Sbjct: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+FR+PD+SRLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQDAVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 208

[Close]

BLAST of Lcy13g005330 vs. ExPASy TrEMBL
Match: A0A5D3CFT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001610 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 184/206 (89.32%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSG 60
           MEDF++KLSL EQMEED  T   DSSNTL+LLR+FLEIQQRRAEAY+KLKRGFDEYMTSG
Sbjct: 1   MEDFEKKLSLDEQMEEDRGT---DSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSG 60

Query: 61  REISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQ 120
           REISYQQLC EIT EFSNCSKQVIDIESNFR+ D++RLELANLLRSVQEQEKQKLHLTAQ
Sbjct: 61  REISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLTAQ 120

Query: 121 IQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180
           IQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDNALKEAIK
Sbjct: 121 IQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180

Query: 181 GVQDAVTTINEHMEEVRYEIAALEDK 207
           GVQDAVTTIN+HMEEVRYEI ALEDK
Sbjct: 181 GVQDAVTTINDHMEEVRYEIEALEDK 203

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BLAST of Lcy13g005330 vs. NCBI nr
Match: XP_023541138.1 (uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 4.5e-98
Identity = 195/208 (93.75%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERT--DASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD+KLSLAEQMEED RT  D+S SSNTLTLLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGREISYQQLCGEITAEFSNCSKQVIDIESNF SPD+ R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHEC+HVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECLHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQDAVTTINEHMEEVRYEIAALEDK
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Lcy13g005330 vs. NCBI nr
Match: XP_022945518.1 (uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 uncharacterized protein C19orf60 homolog [Cucurbita maxima] >KAG6573912.1 Required for excision 1-B domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 5.9e-98
Identity = 195/208 (93.75%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERT--DASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD+KLSLAEQMEED RT  D+S SSNTLTLLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGREISYQQLCGEITAEFSNCSKQVIDIESNF SPD+ R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQ+AVTTINEHMEEVRYEIAALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Lcy13g005330 vs. NCBI nr
Match: KAG7012978.1 (hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 194/208 (93.27%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERT--DASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD+KLSLAEQMEED RT  D+S SSNTLTLLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLT 120
           SGREISYQQLCGEITAEFSNCSKQVIDIESNF SPD+ R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTP+EHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPQEHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 207
           IKGVQ+AVTTINEHMEEVRYEIAALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Lcy13g005330 vs. NCBI nr
Match: XP_038892275.1 (uncharacterized protein LOC120081463 [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 4.0e-94
Identity = 184/206 (89.32%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSG 60
           MEDF++KLSL EQMEED+RTDASDSSNTL+LLR+FLEIQQRRAEAYA+LKRGFDEYMTSG
Sbjct: 1   MEDFEKKLSLDEQMEEDQRTDASDSSNTLSLLREFLEIQQRRAEAYARLKRGFDEYMTSG 60

Query: 61  REISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQ 120
           REISYQQLC +IT EFSNCSKQVIDIESNFRS D++RLELANLLRSVQE+EKQKLHLTAQ
Sbjct: 61  REISYQQLCSQITTEFSNCSKQVIDIESNFRSSDHNRLELANLLRSVQEKEKQKLHLTAQ 120

Query: 121 IQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180
           IQLLKKAGRPSER+VSHENCRF  PREHECVHVHE+T ASGTEEAEA+AEYDNALKEAIK
Sbjct: 121 IQLLKKAGRPSERVVSHENCRFNAPREHECVHVHEMTGASGTEEAEAEAEYDNALKEAIK 180

Query: 181 GVQDAVTTINEHMEEVRYEIAALEDK 207
           GVQD VTTINE+MEEVRYEIAALEDK
Sbjct: 181 GVQDTVTTINEYMEEVRYEIAALEDK 206

[Close]

BLAST of Lcy13g005330 vs. NCBI nr
Match: XP_004135056.1 (uncharacterized protein LOC101210078 [Cucumis sativus] >KGN52147.1 hypothetical protein Csa_009032 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 4.4e-93
Identity = 186/206 (90.29%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MEDFDEKLSLAEQMEEDERTDASDSSNTLTLLRKFLEIQQRRAEAYAKLKRGFDEYMTSG 60
           MEDF++KLSL EQMEED +T   DSSNTL+LLR+FLEIQQRRAEAY+KLKRGFDEYMTSG
Sbjct: 1   MEDFEKKLSLDEQMEEDRKT---DSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSG 60

Query: 61  REISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSVQEQEKQKLHLTAQ 120
           REISYQQLC EIT EFSNCSKQVIDIESNFRS D++RLELAN LRSVQEQEKQKLHLTAQ
Sbjct: 61  REISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQ 120

Query: 121 IQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180
           IQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEAIK
Sbjct: 121 IQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180

Query: 181 GVQDAVTTINEHMEEVRYEIAALEDK 207
           GVQDAVTTINEHMEEVRYEI ALEDK
Sbjct: 181 GVQDAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of Lcy13g005330 vs. TAIR 10
Match: AT5G04910.1 (unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-67
Identity = 134/217 (61.75%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 2   EDFDEKLSLAEQMEEDERTDASDS--------------SNTLTLLRKFLEIQQRRAEAYA 61
           EDF +K+SL + +  D   +   S              S TL LLR  LEIQQRRA+AYA
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 62  KLKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFRSPDYSRLELANLLRSV 121
            LK GF EY+ SG E  YQ+LC EIT EFS CSKQV ++ES F +P+  R +LA LL  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 122 QEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEA 181
           Q QEKQKLHLT  IQ+LKKAGRPSER+++HENC+FK P +HECVH+HEITEA+GTEEAEA
Sbjct: 124 QTQEKQKLHLTVTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 183

Query: 182 DAEYDNALKEAIKGVQDAVTTINEHMEEVRYEIAALE 205
           DAE+DNALKEAI+GVQDAVT+INE++E++RYEI ALE
Sbjct: 184 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 220

The following BLAST results are available for this feature:

BLAST of Lcy13g005330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CYZ6	1.4e-04	27.78	Required for excision 1-B domain-containing protein OS=Mus musculus OX=10090 GN=...	[more]

BLAST of Lcy13g005330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYI6	2.9e-98	93.75	uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G147	2.9e-98	93.75	uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0KUN3	2.1e-93	90.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612270 PE=4 SV=1	[more]
A0A6J1DAT6	1.1e-92	88.94	uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CFT2	3.1e-92	89.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy13g005330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541138.1	4.5e-98	93.75	uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022945518.1	5.9e-98	93.75	uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 un...	[more]
KAG7012978.1	1.7e-97	93.27	hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038892275.1	4.0e-94	89.32	uncharacterized protein LOC120081463 [Benincasa hispida]	[more]
XP_004135056.1	4.4e-93	90.29	uncharacterized protein LOC101210078 [Cucumis sativus] >KGN52147.1 hypothetical ...	[more]

BLAST of Lcy13g005330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04910.1	1.5e-67	61.75	unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
IPR039491	Required for excision 1-B domain-containing protein	PFAM	PF14966	DNA_repr_REX1B	coord: 31..125 e-value: 6.9E-34 score: 116.4
IPR039491	Required for excision 1-B domain-containing protein	PANTHER	PTHR28309	REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN	coord: 22..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g005330.1	Lcy13g005330.1	mRNA