Lcy13g005170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g005170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tetratricopeptide repeat protein 5-like
Location	Chr13: 4435760 .. 4450931 (-)
RNA-Seq Expression	Lcy13g005170
Synteny	Lcy13g005170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATTAAATACAGTGTTTTTTTTGTTGTTGTTTAATTAAAAAAAAAAAGGTTAAAGGTCCTAAAATAGGACTTCAATATTTCTGCAACTTGATCATGAAAGCGGCGTCGTTTCGTGTTTAACGATCAAGGAATAAACTTGCAAACACAGTATTTGCCTCCCATTTGGTGGGCTGTGCTCCGAGAACTGTCGCTGTCGGCCGATTCACGGAGGCGATGAGCAGCGAAGCCAAGGAACACACGTTCGACGAAGCCACAGCGGCCGCCGAAGAGCTATATCTCATCAGAGACACTTTTTTTCCTGTAAATCCCGATGACAAAACTTCCAAATTGCAAGAGCTCTCGGATCTTGCTGTCAAGATCCTCGATTCTATTCCTCCAGGTCGATTCTGCTTTCATTTTTCTTTGAACTTGCCTATTGCAATAAGCTACTATTCGACCTGGGATTTTGGCTTCCTTGTATGATATCAGAGAAAAATGTTGGGAAATGAGTGATAACGGAAATAAAACTTGGGATTGCGCTTGGTTTGATGTTTGATTTCTGAATATCTTGGACGTTTGGCTGATTTTTTGTGTAAAATATGTTTTCATTAGCTATGAAAGTTACTGCACTATTGTTTGGTGACATGTGTATAGGCTTGGGGTTGGTAATAATGTGAGTGCGTCTGTAGGGAGCTGTAAGTTATATGGGTTTTGATGGTAACTGTTGATACCAGAATTCGTATTGTCAGGTCAATGGTAAATTTGTAATGGATGGAGACAATAATGTGCCTGCAACAAAGGGAACTGAGCACCGGTGCGATGATAAGCCACACACTCCAATGCTCAAGTTAGAATAGGGTTTAGAGAGTGCTTAGAGAGCTTAGACTGTAGTAACCAAGTGAGTATTCTACACGTACCTTTCCCTTTTTTAGGGTATTCTATTTATAATACCGAAGTAGGATAGTGAAACAATTGACATTTATCTCCGAGAATCTTGCTTTGATTCTCAAACCTCTTTAATGGATGGTTACGAATCCGTAACCGTCGTTAAACTTGGTCAACCGTAACTGTTGCTGGCCTTGACCCATGGCTTATCTGTAGGACCCTTAGATGTCTTAACCCCTGACTCTTTGATGGTCGTGGTTCGTCCAGTCCTTCTGAGTAGTAACTTTCAAATCACAGTTGATCCCTTGTGGAGTTGACTATGTGAAACTTGGCTGACCCCATGATGGTCGGCCTTGGAGGGCCCTTAGCCGGCCCCCACAGGGGTCGACCTCATGGGTTGTGACCGACCCCCATGGGGGTTGGCTTTAAAGGTTGTGGCTGATCCTCATGGGGGTCGGCCCTTGATGCCTTTGGGTCAACCCCTCGAGGCCTTTGAGTCGACCCTTCGTGGTCAGCCTTTACGACTCTCACGCCTCTTGGATGACCCCTCTGGAAGTTGGCCTTTTGGTCTCGCTAACTATTCTCGGGGGTCTTGGACTTGTAATGGATCTTTTGGACTTCTTTTGACCTCTTAAGCCATGTTTGGACTTAGGATCCTAATGGGCTTAATGTCAGACACAACCGAAATTCTACTATCAACAGTTGTCCCCACTCTCTAGCTGGAGCTCCTTAGTCAGGTAGCATGTCTTAACCTTACCCTTTTGACTTAGCTCTGGGTTGAAAGTTTACTTACTGTTTGGAGTTCGAGAATGAAAGTGCATTTGACTTTTACGTAGGCGCTATTGCCTAGATTTGTGTGCCTTGGTTTTTATAAATAGGGGAGTCTTGAGTTTAAGTAACTCACTTCCCTTTAAGTTTTTTCACTTTCCTCTTTCTCTTTCCTTATCTCCTCATCGGTTGATCCTCGATTTATATATATATATATATATATATATATATATATATATATATATTAAGGTAATTTATCTTGTTACCCTTCTACTTTTTTTAAGCTATGTTGAGTGATTATGAACTTGACGAGCTTGGTTTGGAGCTGGCTACTCACTTTGGTGTCAACTCTCCTCCCATGATAAGGAGGCGTGAATATCGCAAGTGTTTAACCTGTTGTACTATTTGGGCGGATTTAACGAATCTCCTTCGATTCGTTACCACTAAACAACTAGACTAATTTCGGGAGATGTACAATATTTCGAGCTTTATTCACACGAGGGCCCCACTGCTACGTGAACGCGTCGATAATCCTCCACCTAGGAAGATTGCTCTTTATCTCCCCATGTTTTTGTTCGGGGGTTTGACTTTCTCTCCGTCTCTTATTATAGCAATTATTGATGTATGTTAATATCGCTCCTGCCCAACTTGCCCCCAATGGGTGGAGCGTTCTGCTTGGATGTTACGTGTTATGGCAACAAATGGGAGACTCTTAAGTGATGAGGGTTCGCCATTTCATGTCATTTCATCGCCTGAATTACCACTCAGATGTTGAAGAGTGTTTTTATTTAAGCCCAACTTGCCTCTAGGAATTGAGTGATGAATGCCCGCATTAGGTCCCGAAATGAGGATATGGATTTGTGTTTTAATTTACGGAACCATTTCTTCGTTGGTCCTGCAAGAGTAAAGGAGTATGCCCGACACTTGATAGCATCTCAAACTCCATGGAGTTCCATCCATGACCAAAACGTATCTATGCTCGATTGGGTCTTTAGAGCCATCATAGGTCTTGATGTTGGGTAGTTTGAATCTTGAAGGTGCCTCTTATCGCGTGATCTCATCCGTGAAGGGTGAGTCCACCATATCCAGGAGGTTCTCCAGGTCTATGCTGTTGTGGTCCTGGGACTTCTTCATACTCCCTATTTAATCTTGCATCTTCTTCAGCTCTATTACCCAGGGTTGACTTTCAGCTTCCCTATCCTTGTGAGCCTGGTCCTTCTTATTATTGTCGATCAACTCTCATAGATCTGAACCAAAGTGTGTTTTCTCGTTCGACCACCATCATGGACCAGGGTTCTTGTACAACGGGACCGAGTTCTATGGGATGTGCTTCGGTCTCTGCTATTATGCTCCGTGCGTGAGGGCTGACTCCTTGCCTGGGATAACGTCTCTCGCAGATCATGGCATGTTGATCTTCTGTCATTGCCTCCTAGCTTCAATTTCTCCACTAGATGTGGATTGTGGGTCCGAGACTCTCCCTGTCCTTTTTCCACCAGGCATTTTCCTTTGGCTGGGTTGTGGGGAGGAACTTCGGGTCCTAGAAGGTTGACCCTTCCTCGGCTGATTTCTCAACCTGACTTCTTCACGTTCACCCTCATTGCCTTTGGATAGGGCTTCTATTATTGGGTTTGGGCGCTTTAGGAGCTCCAAAATTTAGGTAATATTGTCGTTCATTCCCTAGACTTTGGTCTCCAAAACTACATATCAATTTACTGCCTTTGTTCCAAGAATTGGAGGGCCGTGGACGTTTCCAGTTTGGTCACCATCCTGAAGCCTGTTGCTCTCCACATTAGGAACATTTTGTTCCCTTGTGGCCATCCACCTTGGGTGTTGATGATTGGACTCATCTCTGTCGATCATCTGATTGTTATGGTTCATCTCGTTACTCATAATGTCTGACACACGAATTGACAGTAGAGAAAAAGTTTGTCAAAGTGTCCCCATAGACGGTGCCAACTGTTGATACCGAAATTTGTATCACCGGCAATCGTATGCTTGTAACAAAGGGAGCTGAGCATTGTGCGATGCTAAGCCACACACACTCCGACACTCAAGTTAGAATAGAGTTGAGAGAGTGCTTAGAGAGCTTAAGCCGTAGTAAACAAGTGAGTATTTTGGATGTAGTAAACGGTCGAGAATCTTGCCTTGATTCTTGGACCTCTTTAATTGATGGTTACGAATTCATAACTGTCGTTGGATTTGTTCAACCGTAACTGTCATTGGCCTTGACCTTTATCTTATTCGTAGGACACTCAGACGTTTAAGCCCCTGGCCCTTTGATGGTCGTGGTTTGTCCAGTCCTTCTGAGGAGTAACTTTCAAATCACGGTTGATCCTTTCGAGGATGGACCATGGGAAGCTTGGCCGACCCCATGAGGGTTGGCCTTGGAGGGCCCTTGGCCGGCCCCCATAGGGGTCGACCTCACGAGTCGTGGCCAACCCCCATTGGGGTCGACCCTTGAGGCCTTTGGGCCAACCCCTCAGGGTCGGCCTTTATGGCTCTCGGGCCTCTTGGCCTCACTAACTATTCTAAAGGGTCTTGGGCTTTTAACGGATCTTTTGGGCTCATTTTGACCTCTTAAGCCATGTTCGGACTTAGAATCCTAACGGGTTTAATGTCAGGCGACTCATGCCCAACCGAAATTCTACCATCAACAGCAACTGTAACATCGTAATGATCATTGATGCAAAATAGTGTCATTTCTTCACTGTTCTGTGGAATGTGAAAGTGAACACACGGACATGCTAAGAACAGAACGCAGGGTATTATGAGATCTAGCATTTGTGTTTGTCTTTATTTCTTTGCTATTCAGAAATAGACAAAATAGGCATTGATTCCCATGAAGGCAGAAAAGTTAATATGATACTAGCTCCTAATGAAGTTCATTCCCTGAAATTTAGGCGGTTTATTTCTGTAATGTTGAATTTGTAAATACAATGGAACAGAAGCATGGACTTGTTTTTTTTTCTTTCCCCATAATGGTGTAACACCTTAGGCTGCGGAGGGCATCAAAACTCCCTTATGTATTTGTTTGTTCCTGCAGTGCATGTGCTCGAAATTGTGAGGCTGGTTATTTTATTTTATGTTTTTTATTTTTTATTTTTTATTTTTTTTAATTTTTAAAATTTTTACGAGGGTTTTAATGTACATTATCTTGGATAGAATCTTGTTCCACCTATAAATTTGTTTTCCTTATTAGTTAAGTTTCTTATTGAGACAGAACAAAGGAAAACACCTTTGCAGCGTGCCATGTATGAATACCTAAGAGGAAAAATGTTGGATGTATTTCCAGAATATAGAAAAGAAGCAGAGGATCATCTCTCAAAAGCTGTAAGTGTCATAAATCATTAAGCTTTTGTAGTTTGTATGCTTTTGTTTGGAGTGATAATTTGACTGTTTCAAGCTCCAGGTTAAGTTGAATCCATCCCTTGCCGATGCATGGCTGTGTTTAGGTAACTGCATTTGGAAAAAAGGAGATCTATCTTCAGCAAAGAACTGCTTTACTTTAGCATTAAACAAGGTTCCAACTGACTGTGCATTTCCTTGGTTTCTTTTCTTCTTGTATCCACTCTTTATTTGAGTCAATCATATTAATATACACTACTATAATTATTGCAGCGCCCTGAGAAAAAGTTACTTTGTCAGTTATCAATGCTTGAAAGGAAAATAGCTCAAGGCAAGTGTTATATCTTCTTCTTTCATTGTAACCTTTAGTCGCAGAGTACCCTGTCCATTTCTCAAAAATTGTTCTAGAGATGATCTTTTCCTTCTAAAGGAATATTTTTTGTATGGACAAGGAAGATTGCTCAGAAGTTCATTGCGATAGTTTAGGGAAGGACAACGTTTTTATTGTGCAAGCTTTCATTCAGTTTGTTTGTTACTTTCAAGAGAGAATCAGTTAACAGAAAAATCTTAGTAGAATCAGGCAAGCAACTTGACCAGAGAAATCAGTTTTTTTTTTTTTTTTTTGAAACAAGCAACTTCATTAAAACTAACTTAGGGGAAATAACATCTTTAAGAGTCTCCCAGGCCCAATAGCGGGGGGGGGGGGGGGGGGGGATCCAAAAAGCACTGTCTTCTTCTGAAGTAGAAGAAGAACCAAAATTAACATGACTTAGAACAGGGTGAGGGAAAATGGCGATTCGTGCCAAGCAATGAGCCATGCCATTTAGAGAACGCAGACAGAAGCCAAAACCAGCAATGGTAACTACTTTCTTCAGCTGGACGATCTCGTCTACAAGAAAAGCGGATTCCGTCAGGTCTTCGATTTCTTTGTTGAGGAGATTGACTACGCCAACAGCATCCGATTCGACCAAAATGGGAGGAATGGCCAAATTCGGATGAAGGCTTTTCAAGTAAGGTATGCAGAGCGAATTCCTTCCTGAATAGCTTTAATCTCAAGCCACTTCACTGACCAGTCTTCCTTGATTCTCTTGTACCCCATGCAAATCGGAGATCCTAAGGAGTCACAGAGGATCCAACCTACTCCTCCGAGCGATGGGGATTCACTTTTGGAAGCATCGACATTGAGTTTCCAGAGGTTAGCTGGCGGGGGGATCCAATCACTGTGACTCGCGAGGCTCTTCGGGCAAACGGGGGGAGGATCATTCTCTTGAGACTGGTGCACATTCTTACTATTCCTCTCTCGATTAGAATAGCTTTCAATATATCTGAGGATTAGCTTGCTGTCTGGGCTGGATTCCTTTTGATGAACTGCATTCCTGTGCTTCCAAACACTCCAAAGGATAATAATAGCTATTTCCAAGTCTTCTTTCCCTAGCTTGTCCGCCATCCACTGCCAGTAGTGATCAGGGTCCCAGCAAGATCTGTTCAAAGAGAAAAGATCTTGGGTTAAAGGCAGGCAAGAAACCCAAATCCTCTTTACCTTTTTGCAGTTCCAAAATAAATGAGTAGTCGATTCCTCTGCTGCCCTGCACAGAAAGCAGAAAGCAACCACATGCTACTCTGTAATTAAACTAGTCAATTATAAAAGAATTGGTACTTAGATTTCTTTGATAATGGAAAGCTAAAGAGAAGTACCGAGACAATCTATCCCAAGTGTTTATGAACTCCTAATCCATGTCCTCCAAAACTTTCCTACTCACATTCCAAACTCCCCACAAATTTGCAAATACTACACATTAACAAATGATATTAAACTTCTCTTTGAGGGGTGAGCAGGAACGAACTGGAAATTCTTTTTTTTTTTTTTTTCCATTCAGGAATGAGCTACCCGTGAAAGTCTAAAGGTCTCTCATACTTCTCTCTGGAATTCCTCGAACAAAGCTGAAGACAATCCAATTATAGTTTGTGGAATTTAAAGTAATGTCTTTGTCTAGGCATTAAGACTTCTTTGAGGTTGGTTTGGTATACCAGTCTGGACGATTTAAAAGCAATTATATGCAATGAGAGAATTGTCGTTTTTTATACAAACAAGATGTAATCTGCTTTCTTTAAATTGTTATATCTAGATGAAAATATACTACCATCAAAATTGAATTTTTCTTTCACCTTCATACTGAATAGTTGTTGGTTTTCCAATTTTTTAAATAAGGAAGTCGGGATGCCATTAGAGTACAGAATTTGAACTTTGCGGATGAAGTTTAAACTACTATCCACTGAAATTAGCTCATCTTGGAAACAGTGCATCCATTGGAGGAGGGAATTTGAATTAGCTTCCCCACCTCCCCCCTTTTAACAATGTTATAGACCCAGTTTTGTTTTTCCCTCCAAATAAATAGAAATTTTCTTATCACTAACTTGCTATTTTGTTCCAATTTCTGATTGACCATGATAAAGAACATATATGTTGCTCATCTCATCTGTTTATCCAAAATTTTGTTCCTGCTATAGGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTGTAAGATTACACATCAAAGCATGCCATAACATTATGTTTATTTTTAATTATAACTTGCATAGGTTTTATTTGTTATATGCCATGGCTCTGGTAAGTGCTACCCTTCTTTGTGATTAACTTATTTGTAGGTCTTCTGTAATTGTTTGGATAACTTTCTTACAACATACTCAGAACTGAAATATTTTTTAATGTGCATGTTCATTCCTTGATGTTTGTATTGAATATCGTCTTCCTATATCTTCCAGCTTATAATCCTTGCAATTTTTTTTATAACATGTCCACACTAATTTGTCTTGCAGATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGTAGGTGTCTATTGTAACAGAACAGTTGTGCCCACATTTCATTCTAAATTTCCATAACTTAATTTATGAAACAGATATAATCCAACTCTTTTATTAAGTTTTGGGTTTATTTTAAAGTTTTAAAATTTGCTAATGTATAATAATATTTTGCAGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTAAGTTAAATTTCTCTTCTCTTTTCAATTTGTTTACCTCTAATGTGATTGCTTTCTCTTTATAAGTTTATCAGGTAGTTAAACTTTAAACCTTCTTAAAATGTATAATATTCTACCATTTTGGTTATTCACATTCAATCAATGGATGAAATCTATTTCAGCTAGACAAAGATTTCTTCTGTAACGGGCAGAAATTGGTTATGATAAACTTGTCAACTTGTTTGGTCAATTGAGGAATGGGGATTTACAGTGTATCAGTGTAGGAAGAGGTTTGTGAGGGTGAATAAGGATAATTACAGAGTAGCATGTGGTTGCACACATATTTGAGAATCTGAACCCGATATTTGGTTGTCAAGTTGAGAAATAAGTTTTAAGTATGAATTGAGTAATGTTCCCAAATATGATTTGGAGACAAATTTTCAGTTACAGGAAAAGAGAGGAAGAAAACAATGGTGTCAAGCAGTGGAAAGACTGACCTAATTATTCGGTAGAGAGCTTTTGTTTATGAGTTGAATGTGAATCAAATAATATAAGAGAGCTTTTCTATTTCATCCTTTCCTACACGTTGCTAGCTTTTGTAAATCTCTCTTCTACATATTGTTGTTATTGAGACAGTCAAATTCATTAACTTCTCCTAAACCTGCATAATTTTTGACTCGTTCTTCTTTTAGGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGTATACTTACATCTTTGCGAATAAATACATGTTTTTTTTTTGTTGGCACAAGCTCCTGTTGTTTTTAAACACATACCTTCCCTAGACTTTCGTCGCCCTCTCACTTATCAAAAAGGCAAGAGGTCTTTCATCTCCTTTCCCTTTTGGATGACTAGTCGATTTGTCATGGGAGAAGGGACTCTAGGTTTTGGACCTCGGAGCCTTTTGAGGGCTTTTTCTTTCCTTTTTTTTTTTCCTTCTTCTTCTGGTCTCTTTCTATTCGTCTTCCTCGTAGGGGAGTCTCCATTTTCTCCTCTTTGTAGAAGGTTAAAATCTCCAAGAAAGTGAAGTTTTTTGCCTAGAAAGTTTTACATGGTAGGGTGAACACTCAGGATCGGATCCAAAGATTCTCCTCTTTCGTGTTGCGGCCACAATGGTGTGTCCTTTGTAGGAGTCAGAAGGAGGACCTTCATTATTTACTTTGGGATTGTCCATTTTGCTCTATTTGGTGTCAGTTCTTCAGGGTTTTTGGGGTTGCTTCAGCTCGTAACATTGATTGCTCCTCTATATTTGAGGAAGTTCTTTGGCATCCCCCTTTTCATGGCAAAGGGAGAGTCCTTTGGCAAGCGTGCTTTTTTGCTACTTTGTGGGGTATTTTAGGGAAGCAACGTTGTACTTTAGATGAGGTCGAATGGCAGCCTATCTCTTCTAATCAAGCAAGCTGGCTTGAAAGACCGTTTGAGAGGGAGGAAATATGGAAATCTATGATGATTCTAGGAGCTCAAAAAACTCCAGGTCTGGACGGTTTTACGGGGGAGTTTTTGAAAAAATCTTGGAACACCATTAAAGAAGATCTATTTAAGGTGTTCCAGGAGTTTTTTGAGAACGGTATTATAAACAAAAGGACCAACGAAACATACATCTGCTTGATTCCCAAGAAAAAAGTGGCCAACAAGGTTAGTGACTTTCGCCCCATTAGCCTTATTACCTTGCTGTACAAAGTTATATCCAAGGTTTTAGCTGAAAGAATCAGAGTTATTCTCCCCTCTACCATAAATCAGTCCCAAATGGCCTTCGTAGAAGGTAGACAGATTATGGACGCTATCCTGATGGCAGCTGAGGCAGTAGATGATTACCGAGTGAGAAAAAAGAAAGGCTTTGTGATAAAGGTTGACTTCGAAAAAGCCTATGACAAGGTGGATTGGGAGTTTTTGGACTATATTCTTGAGTCCAAAGGCTTTGGTGATAGGTGGAGAAGTTGGATGAAAGGCTGCTGTGTGAGCTCTAATTTTTCTGTGTTGATAAATTCAAGACCCAGAGGGAAAATTTTTGCTTCTAGAGGCATTAGACAAGGTGACCCATTGTCTCCTTTTCTTTTTACCATCGTGGCCGACTCTCTTAGTCGTTTTATTCGGGTTTGCAGCAACAAAGGGTTTATTAAAGGGTTCAAGGTTGGCAAGGAAGAGGTGGAGATGACCCATATTCAATTTGCAGACGACACTCTCTTGTTCAGTGATAGTAATTCTCAGTCTATGAAGAACTGGCATACCTTCTTAGAGTTCTTTGAGCAAGCCTGTGGGCTTTCTATTAACATGAGTAAAACCAGTATTATTGGCATAAACATGGAGAAGAGGAAACTATTCGAGTGGCTGAGATGATGGGTTGCAAAGTAGAATGCTTTCCCTTTAAATACCTTGGAGTTCCAGTCGGGGGAAGACCAAAGGTAGCCTCTTTCTGGGACCCGGATATGGAAGCTATTCGCTCTAAATTGGCTCTTTGGAAGGGCTTCCCGATTTCAAAGGGGGGAAGAACTACTCTCCTTAAAGCAGTCCTCTCAAGTATCCCTGCTTATTTCCTTTCCATTTTCAGGATCCCTGTGGGGGTTGGCAAAGATATCGAGAAAATTTTCAGAAAATTCCTTTGGAAGGGTGGCGATGGTTATAAAGGTTCCCATTTAGTAAGATGGGATTATGTTACAACTCCGCTTCACCTTGGTGGCTTAGGCATTGATAGTTTAAGAGCCAAAAATGTTGCGTTGATCTCAAAATGGTAATGGAGGTACGAAAATGAACCAGAGGCTCTGTGGAGAAAAGTTATCCAAAGCAAATATGGATCTAATTTTATCTGGGAACAACTCTCCTATAAAAGGTGGCAATCCTCGTGCAGTCCTTGGAAAGATATAGCCAGCATGGTTGAGTTCTACAAAAATAATTGAAGATACAAGGTGGGTAGGGGGGATAATGTATTTTTCTGGCATGATGCGTGGTTATCTGATAGGCCCCTAAAAGAGTTGTTCCCCTCCATTTTTAGGCTTTCTGCGGTTAAGGACAACAAAGTCAGTGAGCTATGGAATGATTCCACTTGGGATCTCAGTCTTAGAAGAGGCATTTTTGATAGGGAAATGAACGACTGGATGACTTTGTTGTCTCTCTTATCCCAATTCAACCTCAATGGTATCGCAGACTGTGTCGTTTGGAAGCTGGAGGGATCCGGAAAATTCTCTGTCAAATCCGCCCTTATGGCCCTGCAGAAGAAAAGAAGAGTTCTGGAAGAAGGCTTATGTGATCAGATATGGGATGGCCTTATTCCTAAGAGGGTGAAATTTTTCGTTTGGACTCTTTCTCACCATAGCATTAATACTATGGATAAGGTGCAGACCAGATTTCCTTGTCTTCAAGTCAGCCCCAATGTTTGTGTAATGTGTATGAAGAATGAAGAATCGGCCCCCCACCTGTTATTACATTGTGAATTCGCTGAGAAAGTGTGGAATTTTTTTTCTAGGATTTTCGGTATGAGCAGTTGCAAACCCAAGTGCGTGGTCAGTTGGTTGAGTGAAGCCCTAAATGGCTGGTGGTTAAAGGGCAAAGCCAAAGTCCTCTGGCGAAATCTCTCAAGGGCTATTCTTTGGCATCTGTGGAAGGAAAGAAATTCAAGAGTCTTCGCTGATAAGTATACGCCTTTCAATATTTTTTGTGGTGTTGTACAGCTTTCGGCCTCCAATTGGTGCGCCCAAGATAGTGTTTTCTCTAATTACTCTGCTGCCATGATGAACCTTCATTGGAAGGCTTTTTTGTAGTTCCTTTTGGAGAAGGGATGCCTTATCCCTTTGTCCTTTGGTTGTTTTTGTGGCTCTTTTGTGAATGAAAGTTATCGTTTCTTCTCAAAAAAAAATTTTAGAGGGGTGGAGAAATCCACGTCTGAGCTTTGGGAGGATTAGATTTAACTCGTCTTTGTATAGGACACCATCGAAAGACCTAGAAGATTACAGAAAAAGTTTCCAATCGATTGGATGTAGAAAAAGAGAGTGATTACAGAACTGTTTGGGTAAAAGAACTCCAACTATACATAAGAAAGGAATGCAACCCAAAAGAGCTTTAAGATCTCTTCTCGTGGAAGATTTGTTTATTTCTTTCCGTCCAAAGCTTCCCATAAAGTAGCAAAAGTTGCGTCCTTAGTCCTCGACTCTGAAAGGCCCACCAAAATATTAAGCAAGAAGTCATTAATTGATTTGATGAGGAAGAGGCATGTAAAGTTGAAACCTGTTGCAAAATTTCATCCAGAATCTCCTAGAGTAAGCACAGACCAACGAGAGAACCATCTTCCTTACTGTCCTTACAGGAACTAAGAGGAAAGAGAGACCTTGAATTGAAGCAAGTTTCTCATTAGGTTCATGCATTTGTTTTTTCATTTGCCAAATACAAAACATGTACGAACTTAAACAGACTTCGTCACTATGTCATTAATTTTATAGAAAAATAAGAAAATAATAACATGACTAAATGTATGCAGATTTTCCTAAGACGTAGTTTACAGATGATTGTGAGACCCCCAATCACGAAAACATATAGTAGAAGGGGTAAAAAGGGTAATACACCAGAAACGGTTAGAGAAGAGAGAGAAGGGGACCACCTGTAGGGATTGTGCGCACTTATATGGCTGAGGGAGTAATTCTGTAGGCATCTTTTGGAAAGTTTTTGGCTTAGACGAGTGTCTGAGAGGGAGAGACCAGCACTCTCGAATTGCTGGGAGTTTGTTCTTGTTGTTTGGCTATTTTGAACTATTCCCTTAATGAAATAACCCCTCTGCTCAAGGAAGAACTCACTGAGGCAGAGTTGGTTTTCAGGCTGTGTTGTGAGTCTTTTCTATTAGATTTTCTTGCTGTTTTGGTCTGTTTGGTGCAGGAATCGAGTTAGGATACCTAACAGATTTACATGTTATTTTGTCTTCTAGGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTGTAAGTTTTTACCAGACCTTTTGTTTATTTATCTCTTCTGCATTCAATATTCACAATTTGCTAATCACCAAATTTTGTTTTGGGTTTTTCCCTTTTTAATTCATTATTTACTGATTGTTACATGTTTGTTTTAACTTTTTAAGCAAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTGTAAGTTCCCCCATGTGACTCGACTCTGATGAGACCAATTTCCTTGGCTAGTTAATCCAAACACTTCCTTCATTTGTCCTAATGAAAGTTCGGTTTTCCATCAACAGAATCTAGCTACTTCTTAATGCTCATGTTTTAGCTATTACAGCCGCTTCCGTATATTCTCTTCTTCTCTATGGTCTTGGAACTTTTTATTTATTTGCTTTTTGTCTACTACGCTGTACTTGTGTCATTCTAATTGGGTAGGGATCTGAAAGAGAAAAAGAAGGAAATGTTGCTTGTATTCTACTAGTTGCATAGTTTTCTTAATTCTGGCATTCTTGTCTGTTATCAAGATGATAATCACACAACTTCATTGTTTGGTTTGCAGATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTAAGCGTAAGACAGTAAATATAGAATTTATGTTTTAACTTTATTGATAGTCGATGTTAAGATTGCTCATCCTTTAATGCAACAACCATGCCTTCTGCTGCTGTTTTTCATCAGTATTATGAAAAAATTTCTCCCCCAGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGGTATTTATCTCAAATATTTAAAATTTACATCTCTGTCTAAAACGAGCATTTTTTTTTTTTTTTGTTGAGTATAGTAATATTTGGGGCGGGAGAATTCGAATCTCTGACCTCTTGGTATGTTAATTATTGCTGAGCTATGCTCACTTTGACCTAAAACGAGCAAATTAACTCAAATGCTTCATTGTTGAGTTATCATATCAGTTGTTTTATAAAGTCTCATGACATGTTTAATAACATTCCACATTATTGCACCGAAAATAACATTTCATTTGGTCAACAAGAGCATAGCTCAATTGGCATAAAGCATGAACTTAGAACCAAGAGGTTAGGGGTTCGAGTTCTCCACCCCACATATTGTAAAAAAGAAAAAAAAAAAACATTTCATTTGTACATTTATTCACAAAATGACAGAAAAATGAGTATCTCATGAGTTTAGTTTGAATATGTTGAACCAGCATTACCGGTTCAAATCAATCCGCGTCGATTTCTTAGAACAAGTTCTTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCGGACATCAATATATGCCCAACACAAACCCTGAAAAGCTGTTGCAAATGGAATTTTTTAAAGCTGCTGGGGTGTCTCTTCCATGTCCTGGATGGTCATCTGTGTGTTGGCTGTAAATAGATTTGGAATGTGAACGAATGGTGTGTGGAAATTTTGTACAATCATCAGCATCAAGAGGAATCAGAAGAAAACACTTGCATAGGAGTTTCAAGTTTGCAGTTTGTTGTTGAAGTTGCTGGGTGTTGTGCTTTGAATTGAATCTCTTTACTTTGTGATGTATTTAATATTGTTTTTTCTTCCCCCACATAGAACTTTCACTCCTAGAATTGTAAATTTTCCACCAAAATGGCTTTGTATAGAGTGCCAATCTTGCTGATGATCATTAACAGTTAATTTTATTGTAAGAAATAAGAACCTGATTCTTTTTAGGGGTTTTCTTATTTTTAACGTAAATTCTAGTATTCTGAA

mRNA sequence

AAAAAAATTAAATACAGTGTTTTTTTTGTTGTTGTTTAATTAAAAAAAAAAAGGTTAAAGGTCCTAAAATAGGACTTCAATATTTCTGCAACTTGATCATGAAAGCGGCGTCGTTTCGTGTTTAACGATCAAGGAATAAACTTGCAAACACAGTATTTGCCTCCCATTTGGTGGGCTGTGCTCCGAGAACTGTCGCTGTCGGCCGATTCACGGAGGCGATGAGCAGCGAAGCCAAGGAACACACGTTCGACGAAGCCACAGCGGCCGCCGAAGAGCTATATCTCATCAGAGACACTTTTTTTCCTGTAAATCCCGATGACAAAACTTCCAAATTGCAAGAGCTCTCGGATCTTGCTGTCAAGATCCTCGATTCTATTCCTCCAGAACAAAGGAAAACACCTTTGCAGCGTGCCATGTATGAATACCTAAGAGGAAAAATGTTGGATGTATTTCCAGAATATAGAAAAGAAGCAGAGGATCATCTCTCAAAAGCTGTTAAGTTGAATCCATCCCTTGCCGATGCATGGCTGTGTTTAGGTAACTGCATTTGGAAAAAAGGAGATCTATCTTCAGCAAAGAACTGCTTTACTTTAGCATTAAACAAGCGCCCTGAGAAAAAGTTACTTTGTCAGTTATCAATGCTTGAAAGGAAAATAGCTCAAGGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTCAAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGCATTACCGGTTCAAATCAATCCGCGTCGATTTCTTAGAACAAGTTCTTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCGGACATCAATATATGCCCAACACAAACCCTGAAAAGCTGTTGCAAATGGAATTTTTTAAAGCTGCTGGGGTGTCTCTTCCATGTCCTGGATGGTCATCTGTGTGTTGGCTGTAAATAGATTTGGAATGTGAACGAATGGTGTGTGGAAATTTTGTACAATCATCAGCATCAAGAGGAATCAGAAGAAAACACTTGCATAGGAGTTTCAAGTTTGCAGTTTGTTGTTGAAGTTGCTGGGTGTTGTGCTTTGAATTGAATCTCTTTACTTTGTGATGTATTTAATATTGTTTTTTCTTCCCCCACATAGAACTTTCACTCCTAGAATTGTAAATTTTCCACCAAAATGGCTTTGTATAGAGTGCCAATCTTGCTGATGATCATTAACAGTTAATTTTATTGTAAGAAATAAGAACCTGATTCTTTTTAGGGGTTTTCTTATTTTTAACGTAAATTCTAGTATTCTGAA

Coding sequence (CDS)

ATGAGCAGCGAAGCCAAGGAACACACGTTCGACGAAGCCACAGCGGCCGCCGAAGAGCTATATCTCATCAGAGACACTTTTTTTCCTGTAAATCCCGATGACAAAACTTCCAAATTGCAAGAGCTCTCGGATCTTGCTGTCAAGATCCTCGATTCTATTCCTCCAGAACAAAGGAAAACACCTTTGCAGCGTGCCATGTATGAATACCTAAGAGGAAAAATGTTGGATGTATTTCCAGAATATAGAAAAGAAGCAGAGGATCATCTCTCAAAAGCTGTTAAGTTGAATCCATCCCTTGCCGATGCATGGCTGTGTTTAGGTAACTGCATTTGGAAAAAAGGAGATCTATCTTCAGCAAAGAACTGCTTTACTTTAGCATTAAACAAGCGCCCTGAGAAAAAGTTACTTTGTCAGTTATCAATGCTTGAAAGGAAAATAGCTCAAGGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTCAAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGCATTACCGGTTCAAATCAATCCGCGTCGATTTCTTAGAACAAGTTCTTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCGGACATCAATATATGCCCAACACAAACCCTGA

Protein sequence

MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKTPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKRATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP

Homology

[Close]

BLAST of Lcy13g005170 vs. ExPASy Swiss-Prot
Match: Q8N0Z6 (Tetratricopeptide repeat protein 5 OS=Homo sapiens OX=9606 GN=TTC5 PE=1 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 9.0e-56
Identity = 152/414 (36.71%), Postives = 228/414 (55.07%), Query Frame = 0


Query: 18  EELYLIRDTFFPVNP-DDKTSKLQELSDLAVKILDSIPPEQRKTPLQRAMYEYLRGKMLD 77
           ++LY  RD +F  +  +D   K Q++     K L  +  E   +   +A    L GK L+
Sbjct: 21  DQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQM-EEVVGSVQGKAQVLMLTGKALN 80

Query: 78  VFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLL 137
           V P+Y  +AE+ LSKAVKL P L +AW  LG   WKKGD+++A  CF+ AL     K  L
Sbjct: 81  VTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSL 140

Query: 138 CQLSMLERKIAQGTENE-AKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAW 197
             LSM+ R++   TE+E +  V +S++ AK AV +DV DG SWY LGN+ L+ +F TG  
Sbjct: 141 QNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQ- 200

Query: 198 DHNKLLQSLKAYQNAEK-DEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLS 257
           +     Q+L AY  AEK D K  SNPDL+ N AT++KY E+Y  AL GF  AA  DP+  
Sbjct: 201 NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWP 260

Query: 258 ATRE-VQKMVNLLDKLENML--KAHAKTRRVASLASSVDIV----CSNSSYKRAT----- 317
             R+  Q+++  LD+L ++L  K   KT+++ S+  S+       CS+  Y+ A+     
Sbjct: 261 EPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAHLGPCSDGHYQSASGQKVT 320

Query: 318 -----VDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYG-MRNDTV 377
                +  L  G+N    ++GKV+F +  +   P  + + DS+  C+ + +Y  +++  V
Sbjct: 321 LELKPLSTLQPGVNSGAVILGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNIVQSWGV 380

Query: 378 KEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAP-SAHQAVRT 410
             GD + + EP  R      KGK Y F S+RV+    ++VNGK   S+ QAV T
Sbjct: 381 LIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNGKPQGSSSQAVAT 432

[Close]

BLAST of Lcy13g005170 vs. ExPASy Swiss-Prot
Match: Q99LG4 (Tetratricopeptide repeat protein 5 OS=Mus musculus OX=10090 GN=Ttc5 PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-54
Identity = 151/428 (35.28%), Postives = 230/428 (53.74%), Query Frame = 0


Query: 4   EAKEHTFDEATAAAEELYLIRDTFFPVNP-DDKTSKLQELSDLAVKILDSIPPEQRKTPL 63
           E  +H   +     + LY  RD++F  +  +D   K Q++ +   K L  +  E   +  
Sbjct: 7   EEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQM-EEVLGSAQ 66

Query: 64  QRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNC 123
             A    L+GK L+V P+Y  EAE  LSKAVKL P L +AW  LG   WKKGD++SA  C
Sbjct: 67  VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTC 126

Query: 124 FTLALNKRPEKKLLCQLSMLERKIAQGTENE-AKLVEESIQHAKEAVTLDVKDGNSWYNL 183
           F+ AL     K  L  LSM+ R++   + +E ++ V +S++ AK AV +DV DG SWY L
Sbjct: 127 FSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYIL 186

Query: 184 GNACLTSFFVTGAWDHNKLLQSLKAYQNAEK-DEKMMSNPDLYFNCATVNKYLENYERAL 243
           GNA L+ +F TG  +     Q+L AY  AEK D K  SNPDL+ N AT++KY E+Y  AL
Sbjct: 187 GNAYLSLYFNTGQ-NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEAL 246

Query: 244 SGFEAAALKDPSLSATRE-VQKMVNLLDKLENMLKAHAKT--RRVASLASSVDIV----C 303
            GF  AA  DP     ++  Q+++  L +L ++L++  KT  +++ S+  S+       C
Sbjct: 247 EGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAHLGPC 306

Query: 304 SNSSYKRAT----------VDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTC 363
            +  Y+ A+          +  L  G+N    V+GKV+F +  +   P  + + DS+  C
Sbjct: 307 GDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDSDGPC 366

Query: 364 FVLSLYG-MRNDTVKEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAP- 410
           + + +Y  +++  V  GD + + EP  R+     KGK Y F S+RV+    ++VNGK   
Sbjct: 367 YAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNGKPQN 426

[Close]

BLAST of Lcy13g005170 vs. ExPASy Swiss-Prot
Match: Q5BK48 (Tetratricopeptide repeat protein 5 OS=Rattus norvegicus OX=10116 GN=Ttc5 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-54
Identity = 149/428 (34.81%), Postives = 230/428 (53.74%), Query Frame = 0


Query: 4   EAKEHTFDEATAAAEELYLIRDTFFPVNP-DDKTSKLQELSDLAVKILDSIPPEQRKTPL 63
           E  +    +     ++LY  RD++F  +  +D   K Q++ +   K L  +        +
Sbjct: 7   EEAKQVLQKLQELVDQLYCFRDSYFETHSVEDAGQKQQDVQEEMEKTLRQMEEVLGSVQV 66

Query: 64  QRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNC 123
           + A    L+GK L+V P+Y  EAE  LSKAVKL P L +AW  LG   WKKGD+++A  C
Sbjct: 67  E-AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTC 126

Query: 124 FTLALNKRPEKKLLCQLSMLERKIAQGTENE-AKLVEESIQHAKEAVTLDVKDGNSWYNL 183
           F+ AL     K  L  LSM+ R++   + +E ++ V +S++ AK AV +DV DG SWY L
Sbjct: 127 FSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYIL 186

Query: 184 GNACLTSFFVTGAWDHNKLLQSLKAYQNAEK-DEKMMSNPDLYFNCATVNKYLENYERAL 243
           GNA L+ +F TG  +     Q+L AY  AEK D K  SNPDL+ N AT++KY E+Y  AL
Sbjct: 187 GNAYLSLYFNTGQ-NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEAL 246

Query: 244 SGFEAAALKDPSLSATRE-VQKMVNLLDKLENMLKAHAKT--RRVASLASSVDIV----C 303
            GF  AA  DP+    ++  Q+++  L +L N+L +  KT  +++ S+  ++       C
Sbjct: 247 EGFSQAATLDPAWPEPQQREQQLLEFLSRLTNLLASKGKTKPKKLQSMLGNLRPAHLGPC 306

Query: 304 SNSSYKRAT----------VDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTC 363
            +  Y+ AT          +  L  G+N    V+GKV+F +  +   P  + + DS+  C
Sbjct: 307 GDGRYQSATGQKVTLQLKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDSDGPC 366

Query: 364 FVLSLYG-MRNDTVKEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAP- 410
           + + +Y  +++  V  GD + + EP  R+     KGK Y F S+RV+    ++VNGK   
Sbjct: 367 YAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIQHKGKDYSFSSVRVETPLLLVVNGKPQN 426

[Close]

BLAST of Lcy13g005170 vs. ExPASy Swiss-Prot
Match: Q0P5H9 (Tetratricopeptide repeat protein 5 OS=Bos taurus OX=9913 GN=TTC5 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-52
Identity = 148/431 (34.34%), Postives = 228/431 (52.90%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNP-DDKTSKLQELSDLAVKILDSIPPEQRK 60
           +  E  +    +     ++LY  R+ +F  +  DD   K Q++ +   K L  +  E   
Sbjct: 4   VEEEEVKEVLQKLQELVDQLYSFRECYFETHSVDDAGRKQQDVREEMEKTLQQM-EEVVG 63

Query: 61  TPLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSA 120
           +    A    L GK L+V P+Y  +AE+ LSKAVKL P L +AW  LG   WKKGD+++A
Sbjct: 64  SVQGNAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPKLVEAWNQLGEVYWKKGDVAAA 123

Query: 121 KNCFTLALNKRPEKKLLCQLSMLERKIAQGTENE-AKLVEESIQHAKEAVTLDVKDGNSW 180
             CF+ AL     K  L  LSM+ R++   + +E ++ V +S++ AK AV +D+ DG SW
Sbjct: 124 HTCFSGALTHCKNKVSLQNLSMVLRQLRTDSGDEHSRHVMDSVRQAKLAVQMDILDGRSW 183

Query: 181 YNLGNACLTSFFVTGAWDHNKLLQSLKAYQNAEK-DEKMMSNPDLYFNCATVNKYLENYE 240
           Y LGNA L+ +F TG  +     Q+L AY  AEK D    SNPDL+ N AT++KY ENY 
Sbjct: 184 YILGNAYLSLYFNTGQ-NPKISQQALSAYAQAEKVDRTASSNPDLHLNRATLHKYEENYG 243

Query: 241 RALSGFEAAALKDPSL-SATREVQKMVNLLDKLENML--KAHAKTRRVASLASSVDIV-- 300
            AL GF  AA  DP+     +  Q++++ L +L + L  K   KT+++ S+  ++     
Sbjct: 244 EALEGFSRAAALDPAWPEPWQREQQLLDFLTRLTSFLESKGKVKTKKLQSMLGNLRPAHL 303

Query: 301 --CSNSSYKRAT----------VDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSN 360
             C +  Y+ A+          ++ L  G+N    V+GKV+F +  +   P  + + DS+
Sbjct: 304 GPCGDGRYQSASGQKVTLERKPLNALQPGVNSGAVVLGKVVFSLTTEEKVPFTFGLVDSD 363

Query: 361 QTCFVLSLYGM-RNDTVKEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGK 410
             C+ + +Y M ++  V  GD + + EP  R      KGK Y F S+RV+    ++VNGK
Sbjct: 364 GPCYAVMVYNMVQSWGVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNGK 423

[Close]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL
Match: A0A6J1DC38 (tetratricopeptide repeat protein 5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018722 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 392/411 (95.38%), Postives = 402/411 (97.81%), Query Frame = 0


Query: 7   EHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKTPLQRAM 66
           E TFD+ATAAAEELY IRDT+FPVNPDDK SKL+ELSDLA+KILDSIPPEQRK+PLQRAM
Sbjct: 2   EDTFDKATAAAEELYQIRDTYFPVNPDDKISKLRELSDLAIKILDSIPPEQRKSPLQRAM 61

Query: 67  YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA 126
           YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA
Sbjct: 62  YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA 121

Query: 127 LNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACL 186
           LNKRPEKKLLCQLSMLERKIAQ TENEAKLVEESIQHA+EAVTLDVKDGNSWYNLGNACL
Sbjct: 122 LNKRPEKKLLCQLSMLERKIAQDTENEAKLVEESIQHAREAVTLDVKDGNSWYNLGNACL 181

Query: 187 TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA 246
           TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA
Sbjct: 182 TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA 241

Query: 247 ALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKRATVDHL 306
           ALKDPSLSAT+EVQKMVNLLDKLENML+AHAKTRRV SLASSVDIV SNSSYKRATVD L
Sbjct: 242 ALKDPSLSATKEVQKMVNLLDKLENMLRAHAKTRRVTSLASSVDIVSSNSSYKRATVDLL 301

Query: 307 SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE 366
           SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE
Sbjct: 302 SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE 361

Query: 367 PYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           PYYRNFDFSWKGKHYRFKSIRVDFLEQVL+NGKAP  HQAV+TSIYAQHKP
Sbjct: 362 PYYRNFDFSWKGKHYRFKSIRVDFLEQVLINGKAPPPHQAVQTSIYAQHKP 412

[Close]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL
Match: A0A6J1IQB7 (tetratricopeptide repeat protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111479525 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 6.4e-222
Identity = 388/417 (93.05%), Postives = 401/417 (96.16%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+ATAA EELY IRDTFFPVNPDDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 1   MCSEVKEETFDKATAAVEELYHIRDTFFPVNPDDKLSKLRELSDLAVKILDSISPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+K PEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALSKCPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAV+GKVLFFIKHD LAPLYYLVCDSNQ CFV+SLYGMRNDTVKEGD
Sbjct: 301 ATVDLLSEGLNKSVAVVGKVLFFIKHDGLAPLYYLVCDSNQACFVVSLYGMRNDTVKEGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQAV+TSIYAQHKP
Sbjct: 361 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAVQTSIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL
Match: A0A6J1H0J5 (tetratricopeptide repeat protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458836 PE=4 SV=1)

HSP 1 Score: 777.7 bits (2007), Expect = 2.4e-221
Identity = 388/417 (93.05%), Postives = 401/417 (96.16%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+ATAA EELY IRDTFFPVN DDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 1   MCSEVKEETFDKATAAVEELYHIRDTFFPVNSDDKLSKLRELSDLAVKILDSISPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+KRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALSKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAVIGKVLFFIKHDSLAPLYYL+CDSNQ CFV+SLYGMRNDTVK GD
Sbjct: 301 ATVDLLSEGLNKSVAVIGKVLFFIKHDSLAPLYYLLCDSNQACFVVSLYGMRNDTVKVGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQAV+TSIYAQHKP
Sbjct: 361 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAVQTSIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL
Match: A0A0A0KUM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611630 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.5e-220
Identity = 383/417 (91.85%), Postives = 399/417 (95.68%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           MSSEAKE TF++ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPPEQR++
Sbjct: 1   MSSEAKEVTFEKATAAVEELYLIRDTFFPVNPDDKTSKLRELSDLALKILDSIPPEQRRS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLALNKRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALNKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDH+KLLQSLKAYQNAEKDEKM+SNPDLYFNCATVNKYLENY+RAL
Sbjct: 181 LGNACLTSFFVTGAWDHSKLLQSLKAYQNAEKDEKMLSNPDLYFNCATVNKYLENYDRAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMV LLDKL+NMLKAHAK+R+ AS  SSVD + SN SYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVTLLDKLDNMLKAHAKSRKGASSPSSVDAISSNFSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           AT+ HLSEGLNKTVAV GKVLFFIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDTVKEGD
Sbjct: 301 ATISHLSEGLNKTVAVTGKVLFFIKHDSLAPLYYLACDSNQTCFVLSLYGMRNDTVKEGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITL+EPYYRN  FSWKGKHY FKSIRVDFLEQVLVNGKAPS HQAVR SIYAQHKP
Sbjct: 361 QITLVEPYYRNLGFSWKGKHYEFKSIRVDFLEQVLVNGKAPSTHQAVRASIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL
Match: A0A1S3BFP3 (tetratricopeptide repeat protein 5-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489332 PE=4 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.3e-219
Identity = 385/421 (91.45%), Postives = 399/421 (94.77%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SEAKE TFD+ATAA EELYLIRDTFFPVNPDDKTSKL+ELSDLA+KILDSIPPEQRK+
Sbjct: 1   MCSEAKEDTFDKATAAVEELYLIRDTFFPVNPDDKTSKLRELSDLALKILDSIPPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLALNKRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALNKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDH+KLLQSLKAYQNAEKDEKM+SNPDLYFNCATVNKYLENY RAL
Sbjct: 181 LGNACLTSFFVTGAWDHSKLLQSLKAYQNAEKDEKMLSNPDLYFNCATVNKYLENYYRAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLK----AHAKTRRVASLASSVDIVCSNS 300
           SGFEAAALKDPSLSATREV KMV LLDKL+NMLK    AHAK+R+ AS  SSVD + SN 
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVTLLDKLDNMLKVYSQAHAKSRKGASSPSSVDAISSNF 300

Query: 301 SYKRATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTV 360
           SYKR T+DHLSEGLNKTVAV GKVLFFIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDTV
Sbjct: 301 SYKRTTIDHLSEGLNKTVAVTGKVLFFIKHDSLAPLYYLACDSNQTCFVLSLYGMRNDTV 360

Query: 361 KEGDQITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHK 418
           KEGDQITLLEPYYRN DFSWKGKHY+F SIRVDFLEQV+VNGKAPSAHQAVR SIYAQHK
Sbjct: 361 KEGDQITLLEPYYRNLDFSWKGKHYQFNSIRVDFLEQVIVNGKAPSAHQAVRASIYAQHK 420

[Close]

BLAST of Lcy13g005170 vs. NCBI nr
Match: XP_022150636.1 (tetratricopeptide repeat protein 5-like isoform X1 [Momordica charantia])

HSP 1 Score: 788.9 bits (2036), Expect = 2.2e-224
Identity = 392/411 (95.38%), Postives = 402/411 (97.81%), Query Frame = 0


Query: 7   EHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKTPLQRAM 66
           E TFD+ATAAAEELY IRDT+FPVNPDDK SKL+ELSDLA+KILDSIPPEQRK+PLQRAM
Sbjct: 2   EDTFDKATAAAEELYQIRDTYFPVNPDDKISKLRELSDLAIKILDSIPPEQRKSPLQRAM 61

Query: 67  YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA 126
           YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA
Sbjct: 62  YEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLA 121

Query: 127 LNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACL 186
           LNKRPEKKLLCQLSMLERKIAQ TENEAKLVEESIQHA+EAVTLDVKDGNSWYNLGNACL
Sbjct: 122 LNKRPEKKLLCQLSMLERKIAQDTENEAKLVEESIQHAREAVTLDVKDGNSWYNLGNACL 181

Query: 187 TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA 246
           TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA
Sbjct: 182 TSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAA 241

Query: 247 ALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKRATVDHL 306
           ALKDPSLSAT+EVQKMVNLLDKLENML+AHAKTRRV SLASSVDIV SNSSYKRATVD L
Sbjct: 242 ALKDPSLSATKEVQKMVNLLDKLENMLRAHAKTRRVTSLASSVDIVSSNSSYKRATVDLL 301

Query: 307 SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE 366
           SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE
Sbjct: 302 SEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLE 361

Query: 367 PYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           PYYRNFDFSWKGKHYRFKSIRVDFLEQVL+NGKAP  HQAV+TSIYAQHKP
Sbjct: 362 PYYRNFDFSWKGKHYRFKSIRVDFLEQVLINGKAPPPHQAVQTSIYAQHKP 412

[Close]

BLAST of Lcy13g005170 vs. NCBI nr
Match: KAG6601256.1 (Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 780.8 bits (2015), Expect = 5.9e-222
Identity = 389/417 (93.29%), Postives = 402/417 (96.40%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+ATAA EELY IRDTFFPVNPDDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 133 MCSEVKEETFDKATAAVEELYHIRDTFFPVNPDDKLSKLRELSDLAVKILDSISPEQRKS 192

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 193 PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 252

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+KRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 253 NCFTLALSKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 312

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 313 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 372

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 373 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 432

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAVIGKVLFFIKHDSLAPLYYL+CDSNQ CFV+SLYGMRNDTVK GD
Sbjct: 433 ATVDLLSEGLNKSVAVIGKVLFFIKHDSLAPLYYLLCDSNQACFVVSLYGMRNDTVKVGD 492

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQAV+TSIYAQHKP
Sbjct: 493 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAVQTSIYAQHKP 549

[Close]

BLAST of Lcy13g005170 vs. NCBI nr
Match: XP_023514705.1 (tetratricopeptide repeat protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 779.6 bits (2012), Expect = 1.3e-221
Identity = 387/417 (92.81%), Postives = 401/417 (96.16%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+A AA EELY IRDTFFPVNPDDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 1   MCSEVKEETFDKAAAAVEELYHIRDTFFPVNPDDKLSKLRELSDLAVKILDSISPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+KRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALSKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAV+GKVLFFIKHDSLAPLYYLVCDSNQ CFV+SLYG+RNDTVKEGD
Sbjct: 301 ATVDLLSEGLNKSVAVVGKVLFFIKHDSLAPLYYLVCDSNQVCFVVSLYGLRNDTVKEGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQA +TSIYAQHKP
Sbjct: 361 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAAQTSIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. NCBI nr
Match: XP_022980032.1 (tetratricopeptide repeat protein 5-like [Cucurbita maxima])

HSP 1 Score: 779.6 bits (2012), Expect = 1.3e-221
Identity = 388/417 (93.05%), Postives = 401/417 (96.16%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+ATAA EELY IRDTFFPVNPDDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 1   MCSEVKEETFDKATAAVEELYHIRDTFFPVNPDDKLSKLRELSDLAVKILDSISPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+K PEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALSKCPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAV+GKVLFFIKHD LAPLYYLVCDSNQ CFV+SLYGMRNDTVKEGD
Sbjct: 301 ATVDLLSEGLNKSVAVVGKVLFFIKHDGLAPLYYLVCDSNQACFVVSLYGMRNDTVKEGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQAV+TSIYAQHKP
Sbjct: 361 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAVQTSIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. NCBI nr
Match: XP_022957440.1 (tetratricopeptide repeat protein 5-like [Cucurbita moschata])

HSP 1 Score: 777.7 bits (2007), Expect = 5.0e-221
Identity = 388/417 (93.05%), Postives = 401/417 (96.16%), Query Frame = 0


Query: 1   MSSEAKEHTFDEATAAAEELYLIRDTFFPVNPDDKTSKLQELSDLAVKILDSIPPEQRKT 60
           M SE KE TFD+ATAA EELY IRDTFFPVN DDK SKL+ELSDLAVKILDSI PEQRK+
Sbjct: 1   MCSEVKEETFDKATAAVEELYHIRDTFFPVNSDDKLSKLRELSDLAVKILDSISPEQRKS 60

Query: 61  PLQRAMYEYLRGKMLDVFPEYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120
           PLQRAMYEYLRGKMLDVFP+YRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK
Sbjct: 61  PLQRAMYEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAK 120

Query: 121 NCFTLALNKRPEKKLLCQLSMLERKIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180
           NCFTLAL+KRPEKKLLCQLSMLERK+AQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN
Sbjct: 121 NCFTLALSKRPEKKLLCQLSMLERKMAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYN 180

Query: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240
           LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL
Sbjct: 181 LGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERAL 240

Query: 241 SGFEAAALKDPSLSATREVQKMVNLLDKLENMLKAHAKTRRVASLASSVDIVCSNSSYKR 300
           SGFEAAALKDPSLSATREV KMVNLLDKL+NMLKAHAKTRRV S +SSVDIV SNSSYKR
Sbjct: 241 SGFEAAALKDPSLSATREVHKMVNLLDKLDNMLKAHAKTRRVTSFSSSVDIVSSNSSYKR 300

Query: 301 ATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGD 360
           ATVD LSEGLNK+VAVIGKVLFFIKHDSLAPLYYL+CDSNQ CFV+SLYGMRNDTVK GD
Sbjct: 301 ATVDLLSEGLNKSVAVIGKVLFFIKHDSLAPLYYLLCDSNQACFVVSLYGMRNDTVKVGD 360

Query: 361 QITLLEPYYRNFDFSWKGKHYRFKSIRVDFLEQVLVNGKAPSAHQAVRTSIYAQHKP 418
           QITLLEPYYRNFDFSWKGKHY+F SIRVDFLEQVLVNGKAPSAHQAV+TSIYAQHKP
Sbjct: 361 QITLLEPYYRNFDFSWKGKHYQFNSIRVDFLEQVLVNGKAPSAHQAVQTSIYAQHKP 417

[Close]

BLAST of Lcy13g005170 vs. TAIR 10
Match: AT3G04240.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 4.8e-04
Identity = 33/100 (33.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 85  AEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSSAKNCFTLALNKRPEKKLLCQLSMLER 144
           A  +  +AVKL P+  DA+L LGN     G  + A  C+  AL  RP        +M   
Sbjct: 242 ALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS------AMAFG 301

Query: 145 KIAQGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNA 185
            IA     + +L + +I+H K+A++ D +   ++ NLGNA
Sbjct: 302 NIASIYYEQGQL-DLAIRHYKQALSRDPRFLEAYNNLGNA 334

The following BLAST results are available for this feature:

BLAST of Lcy13g005170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N0Z6	9.0e-56	36.71	Tetratricopeptide repeat protein 5 OS=Homo sapiens OX=9606 GN=TTC5 PE=1 SV=2	[more]
Q99LG4	1.7e-54	35.28	Tetratricopeptide repeat protein 5 OS=Mus musculus OX=10090 GN=Ttc5 PE=1 SV=2	[more]
Q5BK48	3.8e-54	34.81	Tetratricopeptide repeat protein 5 OS=Rattus norvegicus OX=10116 GN=Ttc5 PE=2 SV...	[more]
Q0P5H9	2.1e-52	34.34	Tetratricopeptide repeat protein 5 OS=Bos taurus OX=9913 GN=TTC5 PE=2 SV=1	[more]

BLAST of Lcy13g005170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC38	1.1e-224	95.38	tetratricopeptide repeat protein 5-like isoform X1 OS=Momordica charantia OX=367...	[more]
A0A6J1IQB7	6.4e-222	93.05	tetratricopeptide repeat protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1H0J5	2.4e-221	93.05	tetratricopeptide repeat protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KUM0	3.5e-220	91.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611630 PE=4 SV=1	[more]
A0A1S3BFP3	1.3e-219	91.45	tetratricopeptide repeat protein 5-like isoform X3 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Lcy13g005170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150636.1	2.2e-224	95.38	tetratricopeptide repeat protein 5-like isoform X1 [Momordica charantia]	[more]
KAG6601256.1	5.9e-222	93.29	Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023514705.1	1.3e-221	92.81	tetratricopeptide repeat protein 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980032.1	1.3e-221	93.05	tetratricopeptide repeat protein 5-like [Cucurbita maxima]	[more]
XP_022957440.1	5.0e-221	93.05	tetratricopeptide repeat protein 5-like [Cucurbita moschata]	[more]

BLAST of Lcy13g005170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04240.1	4.8e-04	33.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 147..167
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	PANTHER	PTHR26312:SF87	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 11..341
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 11..341
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 100..133 e-value: 0.023 score: 23.9 coord: 220..253 e-value: 18.0 score: 12.7
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 100..133 score: 8.7914
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..276 e-value: 1.6E-92 score: 311.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 83..244
IPR032076	Tetratricopeptide repeat protein 5, OB fold domain	PFAM	PF16669	TTC5_OB	coord: 298..409 e-value: 3.6E-39 score: 133.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g005170.1	Lcy13g005170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding