Lcy13g005040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g005040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	B-box zinc finger family protein
Location	Chr13: 4309373 .. 4309858 (+)
RNA-Seq Expression	Lcy13g005040
Synteny	Lcy13g005040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAACTTGTGAATTCTGTGCTGCATTGAGGCCAATTATTTACTGTACGCCTGATGCAGCCCACCTTTGCCTTTCCTGTGATGCAAAAGTTCATTCAGCTAATGCCCTTTCAAGTCGACATCTTCGGACTCTCTTGTGTGAATTTTGCCGAAGTTTCCCTTCTTATCTTCAGTGTTTAGATCATCATATGTTCTTGTGTCGTGGCTGCGACCGAACCCTTCATGTTGCCTCTTCCCAACACCAGAAAAGGACTATCAGAGGGTACATGGGATGTCCTTCAGCCAAGGATTTTGCAGCACTTTGGGGTTTTCATGTAAATGAAGTTGACAAAGATAAGTTTGTGTCCACTTCTGGCTCTGAAACTTCCAGTGTTATAACTTTCAACGCACCGGGACGAAGTTCTCATATCTCTGGTGCTGAAGCTGAAAACAAGGTTGGATCATTAACTCATGAAACTGAGGTTGGAGAAAGTTTCATGTAA

mRNA sequence

ATGGAGAGAACTTGTGAATTCTGTGCTGCATTGAGGCCAATTATTTACTGTACGCCTGATGCAGCCCACCTTTGCCTTTCCTGTGATGCAAAAGTTCATTCAGCTAATGCCCTTTCAAGTCGACATCTTCGGACTCTCTTGTGTGAATTTTGCCGAAGTTTCCCTTCTTATCTTCAGTGTTTAGATCATCATATGTTCTTGTGTCGTGGCTGCGACCGAACCCTTCATGTTGCCTCTTCCCAACACCAGAAAAGGACTATCAGAGGGTACATGGGATGTCCTTCAGCCAAGGATTTTGCAGCACTTTGGGGTTTTCATGTAAATGAAGTTGACAAAGATAAGTTTGTGTCCACTTCTGGCTCTGAAACTTCCAGTGTTATAACTTTCAACGCACCGGGACGAAGTTCTCATATCTCTGGTGCTGAAGCTGAAAACAAGGTTGGATCATTAACTCATGAAACTGAGGTTGGAGAAAGTTTCATGTAA

Coding sequence (CDS)

ATGGAGAGAACTTGTGAATTCTGTGCTGCATTGAGGCCAATTATTTACTGTACGCCTGATGCAGCCCACCTTTGCCTTTCCTGTGATGCAAAAGTTCATTCAGCTAATGCCCTTTCAAGTCGACATCTTCGGACTCTCTTGTGTGAATTTTGCCGAAGTTTCCCTTCTTATCTTCAGTGTTTAGATCATCATATGTTCTTGTGTCGTGGCTGCGACCGAACCCTTCATGTTGCCTCTTCCCAACACCAGAAAAGGACTATCAGAGGGTACATGGGATGTCCTTCAGCCAAGGATTTTGCAGCACTTTGGGGTTTTCATGTAAATGAAGTTGACAAAGATAAGTTTGTGTCCACTTCTGGCTCTGAAACTTCCAGTGTTATAACTTTCAACGCACCGGGACGAAGTTCTCATATCTCTGGTGCTGAAGCTGAAAACAAGGTTGGATCATTAACTCATGAAACTGAGGTTGGAGAAAGTTTCATGTAA

Protein sequence

MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSGSETSSVITFNAPGRSSHISGAEAENKVGSLTHETEVGESFM

Homology

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BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot
Match: Q9C9F4 (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36
Identity = 66/114 (57.89%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER CEFC A R ++YC  D A+LCL+CDAKVHSAN+LS RHLRT+LC+ C++ P  ++C
Sbjct: 10  MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRC 69

Query: 61  LDHHMFLCRGCDRTLH-VASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKD 114
            DH MFLC GC+   H   SS+H++R +R Y GCP AKDFA +WGF V + D D
Sbjct: 70  FDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDD 123

[Close]

BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C D  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDER 64

Query: 65  MFLCRGCDRTLH-----VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H       +S H+++TI  Y GCPS+ + +++W F
Sbjct: 65  VSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSF 110

[Close]

BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C++  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64

Query: 65  MFLCRGCDRTLH------------VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H             +  QH+++TI  Y GCPS+ + A++W F
Sbjct: 65  VSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSF 117

[Close]

BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           ME  C+FC   + +IYC  D+A LCL+CD  VHSAN LS RH R+LLCE C   P+ + C
Sbjct: 1   MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60

Query: 61  LDHHMFLCRGCDRTL-HVASSQHQKRTIRGYMGCPSAKDFAALW 104
           ++ ++ LC+GC  T  +     H+ +++  Y  CPS  DF  +W
Sbjct: 61  MNENVSLCQGCQWTASNCTGLGHRLQSLNPYSDCPSPSDFGKIW 104

[Close]

BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot
Match: Q9C7E8 (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.1e-21
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC     +++C  D A LCL CD +VH+AN LS +H+R+ +C+ C + P  ++C   +
Sbjct: 9   CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68

Query: 65  MFLCRGCDRTLH---VASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDK 115
           + LC+ CD  +H     S  H +  + G+ GCPSA + AALWG  + +  KD+
Sbjct: 69  LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDE 121

[Close]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL
Match: A0A0A0KR93 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610520 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCL CDAKVHSANALSSRHLRTLLCEFCRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLPCDAKVHSANALSSRHLRTLLCEFCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKR IRGYMGCPSAKDFAALWGFHV+EVDK KFVSTSG
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRIIRGYMGCPSAKDFAALWGFHVHEVDKAKFVSTSG 120

Query: 121 SETSSVI-TFNAPGRS-SHISGAEAENKV 148
           SE+SSV+ TF+APGRS SHI  A AENKV
Sbjct: 121 SESSSVVKTFDAPGRSRSHI--AAAENKV 147

[Close]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL
Match: A0A1S3BG93 (putative zinc finger protein At1g68190 OS=Cucumis melo OX=3656 GN=LOC103489318 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 138/163 (84.66%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEVCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKRTIRGY+GCPSAKDFAALWGFHVNEVDK KFVSTSG
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRTIRGYVGCPSAKDFAALWGFHVNEVDKAKFVSTSG 120

Query: 121 SETSSVI-TFNAPGRS-SHISGAEAENKVGSLTHETEVGESFM 162
           S TSSV+ TF+A GRS SHI  A A NKV  L    E G SF+
Sbjct: 121 SGTSSVVKTFDASGRSRSHI--AAAGNKV--LYKGQEKGTSFI 159

[Close]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL
Match: A0A5D3CCC1 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001360 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 138/163 (84.66%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEVCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKRTIRGY+GCPSAKDFAALWGFHVNEVDK KFVSTSG
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRTIRGYVGCPSAKDFAALWGFHVNEVDKAKFVSTSG 120

Query: 121 SETSSVI-TFNAPGRS-SHISGAEAENKVGSLTHETEVGESFM 162
           S TSSV+ TF+A GRS SHI  A A NKV  L    E G SF+
Sbjct: 121 SGTSSVVKTFDASGRSRSHI--AAAGNKV--LYKGQEKGTSFI 159

[Close]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL
Match: A0A6J1G033 (putative zinc finger protein At1g68190 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449465 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.6e-66
Identity = 132/171 (77.19%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER+CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFPSYLQC
Sbjct: 1   MERSCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCESCRSFPSYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCR CDR LHVASSQHQK+ IRGYMGCPSAKDFA LWGFHVNEVDKDKFVSTS 
Sbjct: 61  LDHRMFLCRSCDRALHVASSQHQKKIIRGYMGCPSAKDFAQLWGFHVNEVDKDKFVSTSA 120

Query: 121 SETSSVITFNAPGRS-SHISG---------AEAENKVGSLTHETEVGESFM 162
           S+TS V+ F+  GRS S I+G          EAENK+  L    E G SF+
Sbjct: 121 SDTSGVMAFDTAGRSCSRIAGVARMSYPPHTEAENKM--LYKGQEKGTSFI 169

[Close]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL
Match: A0A6J1G048 (putative zinc finger protein At1g68190 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449465 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.6e-66
Identity = 132/171 (77.19%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER+CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFPSYLQC
Sbjct: 1   MERSCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCESCRSFPSYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCR CDR LHVASSQHQK+ IRGYMGCPSAKDFA LWGFHVNEVDKDKFVSTS 
Sbjct: 61  LDHRMFLCRSCDRALHVASSQHQKKIIRGYMGCPSAKDFAQLWGFHVNEVDKDKFVSTSA 120

Query: 121 SETSSVITFNAPGRS-SHISG---------AEAENKVGSLTHETEVGESFM 162
           S+TS V+ F+  GRS S I+G          EAENK+  L    E G SF+
Sbjct: 121 SDTSGVMAFDTAGRSCSRIAGVARMSYPPHTEAENKM--LYKGQEKGTSFI 169

[Close]

BLAST of Lcy13g005040 vs. NCBI nr
Match: XP_038892501.1 (putative zinc finger protein At1g68190 [Benincasa hispida] >XP_038892502.1 putative zinc finger protein At1g68190 [Benincasa hispida] >XP_038892503.1 putative zinc finger protein At1g68190 [Benincasa hispida] >XP_038892504.1 putative zinc finger protein At1g68190 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 9.1e-70
Identity = 139/174 (79.89%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCESCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKRTIRGYMGCPSA DFAALWGFHVNEVDKDKFVST G
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRTIRGYMGCPSANDFAALWGFHVNEVDKDKFVSTCG 120

Query: 121 SETSSVI-TFNAPGRS------------SHISGAEAENKVGSLTHETEVGESFM 162
           SETSSV+  F+APGRS             H+S  EAENKV  L    E G SF+
Sbjct: 121 SETSSVVKAFDAPGRSHSHITAARMSYPPHVSITEAENKV--LYKAQEKGSSFI 172

[Close]

BLAST of Lcy13g005040 vs. NCBI nr
Match: XP_011655796.1 (zinc finger protein CONSTANS-LIKE 9 [Cucumis sativus] >XP_011655797.1 zinc finger protein CONSTANS-LIKE 9 [Cucumis sativus] >XP_011655798.1 zinc finger protein CONSTANS-LIKE 9 [Cucumis sativus] >XP_031741932.1 zinc finger protein CONSTANS-LIKE 9 [Cucumis sativus] >KGN52118.1 hypothetical protein Csa_008031 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 5.9e-69
Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCL CDAKVHSANALSSRHLRTLLCEFCRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLPCDAKVHSANALSSRHLRTLLCEFCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKR IRGYMGCPSAKDFAALWGFHV+EVDK KFVSTSG
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRIIRGYMGCPSAKDFAALWGFHVHEVDKAKFVSTSG 120

Query: 121 SETSSVI-TFNAPGRS-SHISGAEAENKV 148
           SE+SSV+ TF+APGRS SHI  A AENKV
Sbjct: 121 SESSSVVKTFDAPGRSRSHI--AAAENKV 147

[Close]

BLAST of Lcy13g005040 vs. NCBI nr
Match: XP_008446649.1 (PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >XP_008446650.1 PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >XP_008446651.1 PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >KAA0034594.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK09145.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 6.5e-68
Identity = 138/163 (84.66%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFP+YLQC
Sbjct: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEVCRSFPTYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCRGCDRTLHV+SSQHQKRTIRGY+GCPSAKDFAALWGFHVNEVDK KFVSTSG
Sbjct: 61  LDHQMFLCRGCDRTLHVSSSQHQKRTIRGYVGCPSAKDFAALWGFHVNEVDKAKFVSTSG 120

Query: 121 SETSSVI-TFNAPGRS-SHISGAEAENKVGSLTHETEVGESFM 162
           S TSSV+ TF+A GRS SHI  A A NKV  L    E G SF+
Sbjct: 121 SGTSSVVKTFDASGRSRSHI--AAAGNKV--LYKGQEKGTSFI 159

[Close]

BLAST of Lcy13g005040 vs. NCBI nr
Match: XP_022945134.1 (putative zinc finger protein At1g68190 isoform X2 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 132/171 (77.19%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER+CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFPSYLQC
Sbjct: 1   MERSCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCESCRSFPSYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCR CDR LHVASSQHQK+ IRGYMGCPSAKDFA LWGFHVNEVDKDKFVSTS 
Sbjct: 61  LDHRMFLCRSCDRALHVASSQHQKKIIRGYMGCPSAKDFAQLWGFHVNEVDKDKFVSTSA 120

Query: 121 SETSSVITFNAPGRS-SHISG---------AEAENKVGSLTHETEVGESFM 162
           S+TS V+ F+  GRS S I+G          EAENK+  L    E G SF+
Sbjct: 121 SDTSGVMAFDTAGRSCSRIAGVARMSYPPHTEAENKM--LYKGQEKGTSFI 169

[Close]

BLAST of Lcy13g005040 vs. NCBI nr
Match: XP_022945132.1 (putative zinc finger protein At1g68190 isoform X1 [Cucurbita moschata] >XP_022945133.1 putative zinc finger protein At1g68190 isoform X1 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 132/171 (77.19%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER+CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCE CRSFPSYLQC
Sbjct: 1   MERSCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCESCRSFPSYLQC 60

Query: 61  LDHHMFLCRGCDRTLHVASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKDKFVSTSG 120
           LDH MFLCR CDR LHVASSQHQK+ IRGYMGCPSAKDFA LWGFHVNEVDKDKFVSTS 
Sbjct: 61  LDHRMFLCRSCDRALHVASSQHQKKIIRGYMGCPSAKDFAQLWGFHVNEVDKDKFVSTSA 120

Query: 121 SETSSVITFNAPGRS-SHISG---------AEAENKVGSLTHETEVGESFM 162
           S+TS V+ F+  GRS S I+G          EAENK+  L    E G SF+
Sbjct: 121 SDTSGVMAFDTAGRSCSRIAGVARMSYPPHTEAENKM--LYKGQEKGTSFI 169

[Close]

BLAST of Lcy13g005040 vs. TAIR 10
Match: AT1G68190.1 (B-box zinc finger family protein )

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-37
Identity = 66/114 (57.89%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MERTCEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQC 60
           MER CEFC A R ++YC  D A+LCL+CDAKVHSAN+LS RHLRT+LC+ C++ P  ++C
Sbjct: 10  MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRC 69

Query: 61  LDHHMFLCRGCDRTLH-VASSQHQKRTIRGYMGCPSAKDFAALWGFHVNEVDKD 114
            DH MFLC GC+   H   SS+H++R +R Y GCP AKDFA +WGF V + D D
Sbjct: 70  FDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDD 123

[Close]

BLAST of Lcy13g005040 vs. TAIR 10
Match: AT5G48250.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C D  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDER 64

Query: 65  MFLCRGCDRTLH-----VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H       +S H+++TI  Y GCPS+ + +++W F
Sbjct: 65  VSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSF 110

[Close]

BLAST of Lcy13g005040 vs. TAIR 10
Match: AT3G07650.1 (CONSTANS-like 9 )

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C++  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64

Query: 65  MFLCRGCDRTLH------------VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H             +  QH+++TI  Y GCPS+ + A++W F
Sbjct: 65  VSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSF 117

[Close]

BLAST of Lcy13g005040 vs. TAIR 10
Match: AT3G07650.2 (CONSTANS-like 9 )

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C++  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64

Query: 65  MFLCRGCDRTLH------------VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H             +  QH+++TI  Y GCPS+ + A++W F
Sbjct: 65  VSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSF 117

[Close]

BLAST of Lcy13g005040 vs. TAIR 10
Match: AT3G07650.3 (CONSTANS-like 9 )

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 5   CEFCAALRPIIYCTPDAAHLCLSCDAKVHSANALSSRHLRTLLCEFCRSFPSYLQCLDHH 64
           C+FC   R ++YC  DAA LCLSCD  VHSANALS RH RTL+CE C + P+ ++C++  
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64

Query: 65  MFLCRGCDRTLH------------VASSQHQKRTIRGYMGCPSAKDFAALWGF 106
           + LC+ CD + H             +  QH+++TI  Y GCPS+ + A++W F
Sbjct: 65  VSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSF 117

The following BLAST results are available for this feature:

BLAST of Lcy13g005040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9F4	4.0e-36	57.89	Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68...	[more]
Q9LUA9	2.7e-24	47.17	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q9SSE5	1.0e-23	44.25	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1...	[more]
O23379	2.8e-21	43.27	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7E8	8.1e-21	38.05	Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE...	[more]

BLAST of Lcy13g005040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR93	2.8e-69	89.93	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610520 ...	[more]
A0A1S3BG93	3.1e-68	84.66	putative zinc finger protein At1g68190 OS=Cucumis melo OX=3656 GN=LOC103489318 P...	[more]
A0A5D3CCC1	3.1e-68	84.66	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1G033	8.6e-66	77.19	putative zinc finger protein At1g68190 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1G048	8.6e-66	77.19	putative zinc finger protein At1g68190 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Lcy13g005040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892501.1	9.1e-70	79.89	putative zinc finger protein At1g68190 [Benincasa hispida] >XP_038892502.1 putat...	[more]
XP_011655796.1	5.9e-69	89.93	zinc finger protein CONSTANS-LIKE 9 [Cucumis sativus] >XP_011655797.1 zinc finge...	[more]
XP_008446649.1	6.5e-68	84.66	PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >XP_008446650.1...	[more]
XP_022945134.1	1.8e-65	77.19	putative zinc finger protein At1g68190 isoform X2 [Cucurbita moschata]	[more]
XP_022945132.1	1.8e-65	77.19	putative zinc finger protein At1g68190 isoform X1 [Cucurbita moschata] >XP_02294...	[more]

BLAST of Lcy13g005040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68190.1	2.8e-37	57.89	B-box zinc finger family protein	[more]
AT5G48250.1	1.9e-25	47.17	B-box type zinc finger protein with CCT domain	[more]
AT3G07650.1	7.3e-25	44.25	CONSTANS-like 9	[more]
AT3G07650.2	7.3e-25	44.25	CONSTANS-like 9	[more]
AT3G07650.3	7.3e-25	44.25	CONSTANS-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..47 e-value: 0.0095 score: 25.1
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 43..87 score: 8.61709
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..141
None	No IPR available	PANTHER	PTHR31717:SF40	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..141
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 7.01009E-12 score: 54.9963

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g005040.1	Lcy13g005040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding