Lcy13g003240 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g003240
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Eukaryotic translation initiation factor 5A
Location	Chr13: 2746481 .. 2748980 (-)
RNA-Seq Expression	Lcy13g003240
Synteny	Lcy13g003240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCTTTTCTCGTGTATATAAATTCGCTTTCGTCGCACGTCTCTGAGTCTGAGCCTAGTTAGTTTTCTGTCATCAACTCTCCTCTTTGCACCTTTCCCCCCTACAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATTGTCATCAAGGGCAGGCCTTGCAAGGTTTGTTTCGTTTTCATTCTGATTCCTCTATTCTCCCTTATCCTTTTGCCCCTTCGATCCGCATAAGTCTTGTATAATATTTAATATCTATATGTTAAATCCTTTGCTTCAATTTTTCCTTTTTCATGTTGTGTTATGTATATAGCTTTTTATCCCATCTTGTTCTGTGATTTTTGGTTAATTGTGTTTCTGTGGTTTTTCGGATGGGCTTTTCCCACTGTTTTTGTTTAGCCTTTATTTATGTATTTATTTACTTTTGTCTTCTGATTTTACTTATAGATGATGTTGTACATCGATTTTAGTTTTCTAGATCAACTTTTCTTTGTTTGGTAAAACTGAATTGATGCCCAATCTGGTTAGCAAAGTCAAACTGATGACTTACATGAAGTTACCATATTTCAGTCTGTTTCTTCCTAGGGTTTTTGCGTTGGGTGTTTTCAGTATAATATATGTTACGATGTATGTGTGTTTTTCAATTAACAATCTTGACCTAACGCTTATGCATTGCCGCTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACTGGGAAGCATGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTATGAAGATTTTTTTTCCATTTTATACTTTTCTTAGTAGGTTGTAGGTTTTTTTGTGCAAGCTTGTCATTTCTGATTCTTGTATTTTTGAAACACAGGTTCCCCATGTCAGCCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTGTATGATCAAATTCTCTTTGTTTATTTCTATGTTTCAGTTTCCCCTGATTGTTCATTTAAAGCACCGCCGCTAACCCTTATTTCAATGGAAACTTACCAGATTAGCCTGCTGACGGACAGTGGAAGCACCAAGGATGACCTGAGACTTCCAACTGATGAGAGTTTGCTGTCCCAGGTAATGTTCCTTATTGGCCGTTGACATTTTTCTCTGCTGTTGTTTTCACTTGGCCTTGATGGCTTGGTAGACCGCATTGCTTGTTCCAACGAAAGGATTTCTTCCTCCACTCAGTAAAGTACATTAGCTGGTCCTTAATGGGACTTCAATACTCACTCTGGGATTAGGAGTTTAAGTGAGATGGTTTTTGCTTTTTAGTATTTTTCTCCCTACCTTTATTATCCACATGTTTTTGACGTAGACGGGTTTGAATTTCTAGCAAAATGTGGACATGTGTTTTACTCAAGTGGGGGGCCACATGGGGGTGGGGGAATAACAGTGCATTTTAGATCTGGAAATGCTAGAACGTCGTTTTTAAAGTGCAGAAATATAGTTTGTATATGATTAACTAACAAGTATTTTATTTAAAAAAAACTAACAGGTATTTAATATTATTAGATAGAAAAAGATCCCATTACTCCGAACCAATCTTACTTGAGATTGACAATTTTGAAGTTTTTCTATAAATAGCAGATCCAATTTTGTTAGTGTTTAAAATTGTTATCTTGTGCATAGTACTAAGCTATTGGACCCAATTAATTAGTTCGTTGACAAATAATGTTATGTTGATCTACAAGTTTCTCCGTTTCTCGAACATTGGGGTCTTTATTATGAGATCAGTAGCTTTAGTTGTCATTACTTCCATGTTCTGGATGTATTTGGCCATCTATAAATCTGTTCCGTAGAAGCTACGATTGGCATAGTTTTTAAGACTGATTGTCATGTACCATGTGTTTCATGCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAGATTCCTTTGATAAATACAAATGCAGCAAAATTTCAAAACAGTATCCAGATCATAGTCCAGAGTCGTTTGACATGTTTGAGAAGCTTGGTTCTCCACTGGAATATTCTCGATTAGCGATTTCTTTTACTCTCGAGACTCTACAATTAATATTTATTTTTCTCCTCCTTATTGCTGTTTGAATTAAGAGTTGTTCCTTGTCTAGTCTTCAGTCATTAAATTATGTAAACTTCGTAGCTGCTATGGTTTAAGAGTTGTAGGATAGAATCATGGTTTCTGAGGAAGAAGTATACCATTTTATTTACCAATAGAGGGGTTTCTTCCTTAGTTCTATTGCTTTATCATATTGCAAGTTTTCTTTCTTATGAAGCTTTGATTTTATGTTTTCTTGGGCTATTCAATTATAGTGTATGCG

mRNA sequence

TCGCTTTTCTCGTGTATATAAATTCGCTTTCGTCGCACGTCTCTGAGTCTGAGCCTAGTTAGTTTTCTGTCATCAACTCTCCTCTTTGCACCTTTCCCCCCTACAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATTGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGGAAGCATGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTTCCCCATGTCAGCCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACGGACAGTGGAAGCACCAAGGATGACCTGAGACTTCCAACTGATGAGAGTTTGCTGTCCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAGATTCCTTTGATAAATACAAATGCAGCAAAATTTCAAAACAGTATCCAGATCATAGTCCAGAGTCGTTTGACATGTTTGAGAAGCTTGGTTCTCCACTGGAATATTCTCGATTAGCGATTTCTTTTACTCTCGAGACTCTACAATTAATATTTATTTTTCTCCTCCTTATTGCTGTTTGAATTAAGAGTTGTTCCTTGTCTAGTCTTCAGTCATTAAATTATGTAAACTTCGTAGCTGCTATGGTTTAAGAGTTGTAGGATAGAATCATGGTTTCTGAGGAAGAAGTATACCATTTTATTTACCAATAGAGGGGTTTCTTCCTTAGTTCTATTGCTTTATCATATTGCAAGTTTTCTTTCTTATGAAGCTTTGATTTTATGTTTTCTTGGGCTATTCAATTATAGTGTATGCG

Coding sequence (CDS)

ATGTCGGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATTGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGGAAGCATGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTTCCCCATGTCAGCCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACGGACAGTGGAAGCACCAAGGATGACCTGAGACTTCCAACTGATGAGAGTTTGCTGTCCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAG

Protein sequence

MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK

Homology

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BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-81
Identity = 144/159 (90.57%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LL+QIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-81
Identity = 143/159 (89.94%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++G+TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           E+LLSQIKDGFAEGKDL+V+VMS+MGEE+IC+LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           +SLLSQIKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.3e-81
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           E+LLS IKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 ENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot
Match: Q945F4 (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.9e-81
Identity = 143/159 (89.94%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GSTKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           +SLL+QIKDGFA+GKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL
Match: A0A5D3D1G5 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00070 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.8e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL
Match: A0A1S3BFT8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.8e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL
Match: A0A6J1DCF3 (Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LOC111019214 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.3e-84
Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ESLLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL
Match: A0A0A0KU59 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G606480 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.5e-83
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           + LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL
Match: A0A6J1HY83 (Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC111467343 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.6e-83
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGFISLLTDSG+TKDDLRLP+D
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFISLLTDSGNTKDDLRLPSD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. NCBI nr
Match: XP_038893432.1 (eukaryotic translation initiation factor 5A-4 [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. NCBI nr
Match: XP_008446407.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034452.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK17682.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa])

HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. NCBI nr
Match: XP_022151244.1 (eukaryotic translation initiation factor 5A-4-like [Momordica charantia])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ESLLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. NCBI nr
Match: XP_004135157.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypothetical protein Csa_009020 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 9.2e-83
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           + LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. NCBI nr
Match: XP_022944889.1 (eukaryotic translation initiation factor 5A-4-like [Cucurbita moschata] >XP_022967964.1 eukaryotic translation initiation factor 5A-4-like [Cucurbita maxima] >KAG6574057.1 Eukaryotic translation initiation factor 5A-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGFISLLTDSG+TKDDLRLP+D
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFISLLTDSGNTKDDLRLPSD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of Lcy13g003240 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-77
Identity = 138/159 (86.79%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFT+KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG++SLLTD+GSTKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LL QIK GF +GKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of Lcy13g003240 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-77
Identity = 134/159 (84.28%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFT+KKLEDIVPSSHNCDVPHV+R DYQLIDISEDGF+SLLTD+GSTKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           E+LL+Q+K+GF EGKD++V+VMS+MGEEQ+CALK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of Lcy13g003240 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-71
Identity = 125/157 (79.62%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIG 158
           + L +Q++ GF EGKD++V+VMSSMGEEQICA+K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of Lcy13g003240 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 221.5 bits (563), Expect = 4.9e-58
Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 ESLLSQI 128
           + L +Q+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:

BLAST of Lcy13g003240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24922	1.8e-81	90.57	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
Q9AXJ4	1.8e-81	89.94	Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV...	[more]
P56336	3.1e-81	91.82	Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI...	[more]
Q9AXQ4	5.3e-81	91.82	Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE...	[more]
Q945F4	6.9e-81	89.94	Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV...	[more]

BLAST of Lcy13g003240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1G5	1.8e-84	98.74	Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BFT8	1.8e-84	98.74	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A6J1DCF3	5.3e-84	98.74	Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0KU59	4.5e-83	96.86	Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A6J1HY83	7.6e-83	96.86	Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Lcy13g003240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893432.1	1.7e-84	99.37	eukaryotic translation initiation factor 5A-4 [Benincasa hispida]	[more]
XP_008446407.1	3.7e-84	98.74	PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034...	[more]
XP_022151244.1	1.1e-83	98.74	eukaryotic translation initiation factor 5A-4-like [Momordica charantia]	[more]
XP_004135157.1	9.2e-83	96.86	eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypo...	[more]
XP_022944889.1	1.6e-82	96.86	eukaryotic translation initiation factor 5A-4-like [Cucurbita moschata] >XP_0229...	[more]

BLAST of Lcy13g003240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	1.2e-77	86.79	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	1.6e-77	84.28	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	1.3e-71	79.62	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	4.9e-58	81.89	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 85..154 e-value: 3.0E-32 score: 123.1
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 85..154 e-value: 1.5E-28 score: 98.7
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..157 e-value: 4.9E-66 score: 219.0
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 17..153 e-value: 8.6E-41 score: 136.8
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 1..156
None	No IPR available	GENE3D	2.40.50.140		coord: 86..158 e-value: 2.0E-33 score: 116.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 1..156
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 86..156 e-value: 8.07375E-31 score: 104.156
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..85 e-value: 1.5E-43 score: 148.5
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 50..57
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 86..156
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 15..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g003240.1	Lcy13g003240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding