Lcy13g002770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g002770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ran guanine nucleotide release factor
Location	Chr13: 2444434 .. 2449193 (-)
RNA-Seq Expression	Lcy13g002770
Synteny	Lcy13g002770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGAAGATTTCTCTTCAGAGCATGCTCTGTTCGGGGGCGCTATTGTTAGTACATTCCCTCTTAGGTTCCAGGTTTGTCTTGTTCAATTGCGATTCTGTCTCTTTGCTTTTCGGTGTATAACTGTTTTTCTTTATTTGATTGATGAAATTTATGTATTTAGCTCGTGATTGTTGTAATTCTAGGACGTGAGCAACATCCGACAAGTCCCCGATCATCAGGTTGGCAGCATTTTGATGCTTTTATGAGGACAATCAAGGTCCTTTTTTTAAAAAAAAAAAAAAAAAATTAAAAGCCACAAGTTTGCCGAACACTAAAGTTCTTTTTTGAAAATGTTTGTGGTGGGTTCAAAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCACGATGTTGGAGACAATGGAAGTGCTGTTTGGTTTCTTCAAGACCTTGCCACTGAGCAGGATGCAGAGGGAAGCATGGTAATCCGACTTTTAGTTCATGATACTTTCCTTTTCTCTTTCTTATTGCTTGCTTCATCTGCTATCAGTTTAACATCGAAGTAGTTATTAGTAAGCTATAATGCGAGATGGGTTGACGTGTTTTGGCTATTAAGTTCTTGTTTAGTGATGAAGTCAGTATGATATATGTATATGCCTGTGCGTAAACTATGTTTTGTCTATGATTGTTATTTTATTGCTTATTAGAGAATGTGTGTTGATTTGTGGGGAAGATCAGAGATGTTTCAAGTAGTTACTTATCAAATATTGGCAGACAGTTTGTATTGGAAATTTTGGTTTGTTTTAAGGATAAGTAGACGATGCTGGAGGAAGGTTTCATTCCTTATACAGAAACTAATATCTTGCTTTTGATTACTATCTTTGGAAATGTGAGAAACACGAATATGTGTTAAGACCATTCAATCTTTTCTCTTGCTTAATCATGTAATATAATGTTACTACAAAAAACTATCAAAATAATATGATTTTATTTGTGCTGGTATTAGAGAAATAGCTCATGTGGTGGATCAGAGAATCAACAGTGTTCATAATACCCAGTTTAATAAAAATTTACTGCAAACTTGTATGTTAGGGAGAGGGGTGAAGAAGTAATGCAATCAAATTTAAGAACTTTTTCTAGATCAGTAGTAATTAGGATTACTATTTTTATCCTTTCTTATACTGGCGTCAGTTTCTTGATATAGGAAATGGTCCTTGGTCTGTCTTCTAAGTTCAATTTCAAGAGATGGTTCAAACTGTGGTTTGCCTCATGTTTTTGGGTTCACAAATTTGTGTTTCTTTGTAGGGGTTTAATTTCCATGAACATTTTGATGAGAGGGAAAGAAAATGAGGTAAACAATTAGTTTGTCTGATTTTGATTTTAATAATGAATGCTATTGTAGTTTTTGTTTCAAAAAAAAATCAAGAGATGGATGTCGTATTTTTTGTAGTCTGATGTTATGAGCCAACTCAAAGCACAGTCATGTTTTGTTAGTAGTTTGTCTTCTGTCCCACTGGAGAATTGCTTTGACGTTCTTGTGAATCCAATTAGTTTTTTTTTTTTTACCTATAAATAAATATTTGCTTTGTGGTTTCATTTATTTGCATTTATCGTCTCTTCTATCATCTATGCATACACTATTGCATGCTCTGAACTTGAGCTCTGGAATCATATCTTCTGCTTTACTTATGGTGCAATTTTGCTCCAGGTAATTGAGCAATCTGGAGTGATCGAGGCACCTGGATTGTGTTATGGAAATATACCTTCTGTCGTAACAACTGCAGTTGGCCAAATGGTATGTGTTGCTGCTGTGTGGTGCGTATCAATTACATGACCGGTTGAATTTTTCAACTTCACTGCACATTCTTCATGTCATCTCACTTTATTTAGTAGTTTACTCTTGTTTCTAGAATCATTCTTCACAATAATATTAATTTTGCTTCCTGCTGAGTTCTATCTGGAAAATTTGCATGCTTGGCGTTGTTTGTCATGGACCTTCAACTCCAGCCATTCGCAATCAAATTAGAGATGTCACATTGCCTTGATTTTTTTGGTAATTTTAGAAATTTGGCCTTTTTGTATGTCTTGCGTTAGCTACTTCTGAGTTAGTTTCTTTTGTTTTCATATGCATTGTGTGGATCACTATGTTCAGAAGTAGAGGGAAGAAGAAGATTACAGTTGATTTATAGCGTGGTTTGACATTTTGTCTACATCCACGGTAAAAGATCAACTAAGCTTCAGTAAATGGTTTCTGAAGGAAATAATAGAGACCCTCCCCAAACGCTAAAAAGAAAAAAAAAGATAACCCTCTGTCAACTGTCAAGTCTGTAAATCCCCTTTCTCTTAGCTCACATGTGGAAAGTAACACATTGAGAATCACATGCCTCTGTTATAATTATGAAATAATAATAACAACAATGTACTAACAAAAGGATCACATGGCAACGGTACTACTGTTTCACTTAACTGACACAAAATCTCTGTAGCAAATTGTCTTTCTTTGTCATGCTCGAGGTTATGCCAGCATTACTAGTCATTCTCATTGTTTCTACTTTCAACTATCAATTATATCTTGATAGAGTAGTCATTTTGGTCTAAATTTGTTGGGTCAGATGTATCTGCAAGATATTCTAGGCTTGCCCAATCTGTTGTTGTTTTGTTCACAATGGCCATCAGATATCAGTTGAACTTCGATCTAGTCCACATTTTGAAATTTATTTCCAGTTTTCCTGCTCAATTGGTGGCAGTTGTTATGGTTACAAATCTCCGTGACTTTGTCGCACTGTTTCTTCCTTTTCTTTTCAATGGGTCTTGTTTCTGTCTGTGTAGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTAACCTTTCTTATTTTATTTACCCTAGTGCTTTGGTGGTTCCCAATGCTTTTTTTTATAAAGTAAATCTGTTTACTACTTTATGCAGGTTTACCTGGCGAATCTACGTCTTAAAGGAGTTGGTACAGATGTGCTGATCTGTGCATATGAACCCATTCTTATAAAGTGAGTAATTACTCTCAAATAAAAGGGAAATGAACAAAATGCACTGTTAATTAACTTGGAAGGAAGGGGAAAAGAAAGGAACTTCCAGTCGTTCAAAAGTGATAGCTCTTGCGCTTAGTGTCTACTTAGATGCATAATCCTTACTATTCACATCACCACTCCACACATACACTTCTCTGACAAACTTATTTAAGGGGCTCACATTCCCCTCACTACAAAAGATAACCTCCTGATAGACTTATTCTATCCTATCCATACCCTCAGCCCAGACTTTCACTTTGTCCTCAAAATGAAGAGATGAAAGCTGTCGTCTGAATATATAACATGGCTGCGATGCTTCTTTTGGTAGTTGTCCTTCCTAGTGGATAGGATAGGATAAGTCTAAGTTCCCAAACGCTTTACCTACACGAGAAGAATAACACCAGGGGCATGTCAACATCGACCATAAGTTCATCAACTCATGATTGCATGCCCAAAGTTGCTTTTGGGCTTAGTTTAGCTCCACAGGGGCACTTAACTGAGGGGGTAATGGGCAGGGATGATGGAGCATTTGGTTTGGCCAATCTCGACTGTGAAACATGAAATATTGGATGAGTGAATAGTTGTTGTGTCAAGAACCTCTTTGTGATAGGCAACCTTACCAACTCTCTTACCTATATAAGATAGGAACCAAGATCATACTAATGTAGGGGTTAGGTTATCATTCTCCTTCTTGCCACTGGCCTCTATCTGCAAAATATGAAAGAATATACAAACTCATCGGTCTTTTAGAATTGCTAGTTCTCTCCATATAGGCTAACACCTACACAATCCCTATTATTTACATCAACCCACAAATAACTCCCCTAATAAACTTACTAAGGGTTCATTGTTCTCTCTACAAAAGATATCTTCCAGATGCATAACTAACTCAACATGCTAATTCCCCTCTGTTTTCCATTTCCTTCTTGTATACATGAAGTTTTTTTTGTATGTTCTTAATTTGAAATTTTAGATTAGTTACTATTTGTCACATACTTATAATCATAGTTCAAATTGCTCTATAATAAAACAATGCATGCAACTCTTCCTTCTTTAACAATGTTGATAGGTTTCCTACAACCAAGGTGCTGACGCTGAGTGCGTCAGGATTTTTATGATTGTAAATGTTTCATTTATGTGATTCGGTGCCAAGGAAGTTCAGTTTGGGGCAATTATGATCAAATGTTAATAGCCAGACTTAACTCTTAAGGTCTCTTCTGGTGCAAGTACAAGAAAACATAATTTTGAGAAACTAGAGAAACTGCATATTGAGATGGATTCTGAAAGGACAGTGTACTGTTTCAATCATTTTGTAGGGTGAGATAAGGGCCCAAGGAGAACCATCCTTCTTAGTTGGCCAACTTGCCTAAGTTACCTTTTCTAATATCTGGCCCTGTCTGAAGCAAAGCCCATTTTCTTAAATCTTCACAAACCACAACCCAAATAGAAAAAAGTTTGCAGCTAGCACAGCATGTCTTTCTTGTACCTGTCACTTGCCACTCTAATACCAATTATTTTGCTATCTTTTTGTGGTTGCAGTCCTTTGAGCGAAAGTGCTAGCTCAGTTGGCTCTGGTTTGGCCACTCCTGCTTCACAATCCGGATGCATGCCAATGTCTGAGGTATTCAAACTTGCAGCCTCCAGCTTTAAAGTCTATGACTGGAGCGTTTTCGGCCCGCCAGCCTAA

mRNA sequence

ATGCCGGAAGATTTCTCTTCAGAGCATGCTCTGTTCGGGGGCGCTATTGTTAGTACATTCCCTCTTAGGTTCCAGGACGTGAGCAACATCCGACAAGTCCCCGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCACGATGTTGGAGACAATGGAAGTGCTGTTTGGTTTCTTCAAGACCTTGCCACTGAGCAGGATGCAGAGGGAAGCATGGTAATTGAGCAATCTGGAGTGATCGAGGCACCTGGATTGTGTTATGGAAATATACCTTCTGTCGTAACAACTGCAGTTGGCCAAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTACCTGGCGAATCTACGTCTTAAAGGAGTTGGTACAGATGTGCTGATCTGTGCATATGAACCCATTCTTATAAATCCTTTGAGCGAAAGTGCTAGCTCAGTTGGCTCTGGTTTGGCCACTCCTGCTTCACAATCCGGATGCATGCCAATGTCTGAGGTATTCAAACTTGCAGCCTCCAGCTTTAAAGTCTATGACTGGAGCGTTTTCGGCCCGCCAGCCTAA

Coding sequence (CDS)

ATGCCGGAAGATTTCTCTTCAGAGCATGCTCTGTTCGGGGGCGCTATTGTTAGTACATTCCCTCTTAGGTTCCAGGACGTGAGCAACATCCGACAAGTCCCCGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCACGATGTTGGAGACAATGGAAGTGCTGTTTGGTTTCTTCAAGACCTTGCCACTGAGCAGGATGCAGAGGGAAGCATGGTAATTGAGCAATCTGGAGTGATCGAGGCACCTGGATTGTGTTATGGAAATATACCTTCTGTCGTAACAACTGCAGTTGGCCAAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTACCTGGCGAATCTACGTCTTAAAGGAGTTGGTACAGATGTGCTGATCTGTGCATATGAACCCATTCTTATAAATCCTTTGAGCGAAAGTGCTAGCTCAGTTGGCTCTGGTTTGGCCACTCCTGCTTCACAATCCGGATGCATGCCAATGTCTGAGGTATTCAAACTTGCAGCCTCCAGCTTTAAAGTCTATGACTGGAGCGTTTTCGGCCCGCCAGCCTAA

Protein sequence

MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSFKVYDWSVFGPPA

Homology

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BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot
Match: A3KPP3 (Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 63/190 (33.16%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 11  LFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFL 70
           LFGGA+ + FP    D+S +RQ+PD+QEVF     D+S+I ELL+++  V D  +A +  
Sbjct: 5   LFGGALSAVFPSSVMDISELRQIPDNQEVFAHSQTDQSIIIELLEYQSQVQDADAARYHF 64

Query: 71  QDLATEQDAEGSMVIEQSGVIEAP-GLCYGNIPSVVTTAVGQMAISKGRQGREAQNIVRV 130
           +D+A    A  +   E   V + P         S      G   +SK  +  EA+N V V
Sbjct: 65  EDVAGSNKAIENGTWEVRVVEQVPQSEISMQECSSAWLLSGAQLVSKFNE--EAKNTVNV 124

Query: 131 YLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMSEVFKLAASS 190
           +    RL    TD+L+   +P+ INPLS SA+  G+  A P +        + F+    S
Sbjct: 125 HQCLFRLPQFTTDILMTFNDPVFINPLSSSAA--GNMEAIPWT-------LQDFQGVLQS 183

Query: 191 FKVYDWSVFG 200
            ++ D  VFG
Sbjct: 185 LRLLDSGVFG 183

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BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot
Match: Q54ML6 (Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44689 GN=mog1 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M E F  +  L+GGAI    P RF DV++ R +PDHQE+F D   D+S+I EL +F+  +
Sbjct: 1   MSETF-EKRQLYGGAIEIDIPRRFIDVTSYRHIPDHQELFSDEKSDQSVIIELNEFQDHI 60

Query: 61  GDNGSAV-----WFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAIS 120
             N +A+       ++D     D    +   +    E P     +IP  V  A  Q  I+
Sbjct: 61  -SNANAIKHHYEVLVEDAGISTDKSVILNFRELTQAEMPNF-DASIPKYVLLA--QQKIA 120

Query: 121 KGRQGREAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSG 180
           K  +   A+N + +Y+A +RL+   TD+LI   E I + P S S + V +   TP++   
Sbjct: 121 KFNE--TAENTINIYMALVRLEKSKTDLLITFNEAIALAPTSSSVAVVQN--LTPSNDQS 180

Query: 181 CMPMSEVFKLAASSFKVYDWSVF 199
                ++F     SFK+ D+S+F
Sbjct: 181 --KSEQLFLTMLKSFKIKDYSLF 192

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BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot
Match: Q32PE2 (Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.3e-11
Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 0


Query: 8   EHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAV 67
           ++ LFGGA  +T P    DVS++R VPDHQEVF     D+SLI ELL+ +  V    +A 
Sbjct: 6   DNPLFGGAFSATLPPGAIDVSDLRPVPDHQEVFCHRVTDQSLIVELLELQAHVQGEEAAR 65

Query: 68  WFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQGREAQNIV 127
           +  +D+   Q+A  ++ +E    +    L             GQ  ++K  + ++    V
Sbjct: 66  YHFEDVGGVQEAR-AVQVETVQPLVLEKLALRGCCQEAWILSGQQQVAK--ENQQVAKYV 125

Query: 128 RVYLANLRLKGVGTDVLICAYEPILINPLSESASSVG-SGLATPASQSGCMPMSEVFKLA 187
            ++ A LRL    TD+L+   +     P  E+ SS+G   L+ P    G       F+  
Sbjct: 126 TLHQALLRLPQYQTDLLLTFNQ-----PPPENRSSLGPENLSIPPWSLG------DFEQL 185

Query: 188 ASSFKVYDWSVFGP 201
            +S  ++D ++FGP
Sbjct: 186 VTSLTLHDPNIFGP 185

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BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot
Match: Q9HD47 (Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.5e-11
Identity = 56/190 (29.47%), Postives = 92/190 (48.42%), Query Frame = 0


Query: 11  LFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFL 70
           LFGGA  +  P+   DVS++R VPD+QEVF  P  D+SLI ELL+ +  V    +A +  
Sbjct: 9   LFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYHF 68

Query: 71  QDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQGREAQNIVRVY 130
           +D+   Q A  ++ +E    +    L             G+  I+K  + ++    V ++
Sbjct: 69  EDVGGVQGAR-AVHVESVQPLSLENLALRGRCQEAWVLSGKQQIAK--ENQQVAKDVTLH 128

Query: 131 LANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMSEVFKLAASSF 190
            A LRL    TD+L+   +     P  ++ SS+G    +PA  S        F+   +S 
Sbjct: 129 QALLRLPQYQTDLLLTFNQ-----PPPDNRSSLGPENLSPAPWS-----LGDFEQLVTSL 185

Query: 191 KVYDWSVFGP 201
            ++D ++FGP
Sbjct: 189 TLHDPNIFGP 185

[Close]

BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot
Match: O75002 (Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mog1 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 52/192 (27.08%), Postives = 91/192 (47.40%), Query Frame = 0


Query: 11  LFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDE-SLIFELLDFKHDVGDNGSAVWF 70
           LFGGA+ + FP +F D S +RQ+PD+QEVF+  S++  ++I ELL+      D   A + 
Sbjct: 4   LFGGALCADFPPKFLDASVLRQIPDNQEVFLQDSKENLTVIIELLEKIEKPFDGSVAAYH 63

Query: 71  LQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVG-QMAISKGRQGREAQNIVR 130
              +A + DA   ++     + E       +  +  ++  G Q  + KG++  E+   V 
Sbjct: 64  FNSIAFDNDASQRVIWRDKSLGEDDFEGMRSEKASGSSVQGCQRVLEKGKRNPESATNVA 123

Query: 131 VYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLAT--PASQSGCMPMSEVFKLA 190
           +++  + L    TD++I    P+       + SSV S +    P+ QS      E  +  
Sbjct: 124 IFVNVITLIDFQTDIVISVNAPL------PNTSSVPSSVENIPPSDQSIVRAALETIQRV 183

Query: 191 ASSFKVYDWSVF 199
             S  + D +VF
Sbjct: 184 TRSLVLVDKTVF 189

[Close]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL
Match: A0A6J1JJW2 (probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LOC111485103 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 189/199 (94.97%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYANIPSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGLATPASQSGC+PM 
Sbjct: 121 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCIPMP 180

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWSVFG
Sbjct: 181 EVFKLALSSFKVCDWSVFG 199

[Close]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL
Match: A0A6J1GZ86 (probable ran guanine nucleotide release factor OS=Cucurbita moschata OX=3662 GN=LOC111458863 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.4e-99
Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFP+RFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPIRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIE PGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEVPGLCYANIPSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGL TPASQSGCMPM 
Sbjct: 121 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLTTPASQSGCMPMP 180

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWSVFG
Sbjct: 181 EVFKLALSSFKVCDWSVFG 199

[Close]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL
Match: A0A6J1DAG6 (probable ran guanine nucleotide release factor OS=Momordica charantia OX=3673 GN=LOC111019159 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 187/202 (92.57%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MPEDFSSE  LFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MPEDFSSERPLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
           GD+GSAVWFLQDLA+EQDAEG+MVIEQSGVIEAPGLC+GNI SVVTTAVGQMAISKGRQG
Sbjct: 61  GDSGSAVWFLQDLASEQDAEGNMVIEQSGVIEAPGLCFGNITSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSV SGLATPASQ GCMPM 
Sbjct: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVCSGLATPASQIGCMPMP 180

Query: 181 EVFKLAASSFKVYDWSVFGPPA 203
           EVFKLA SSFKV D S+FG PA
Sbjct: 181 EVFKLAVSSFKVNDRSLFGAPA 202

[Close]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL
Match: A0A0A0KU01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.4e-97
Identity = 185/202 (91.58%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M  DFS+E ALFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
           GDNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAP LCYGNIPSV TTAVGQMAISKGRQG
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLKGVGTDVLI AYEPI+INPLSESASSVGSGLATPAS SG MPM 
Sbjct: 121 REAQNIVRVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLATPASHSGYMPMP 180

Query: 181 EVFKLAASSFKVYDWSVFGPPA 203
           EVFKLA SSFKV DWS+FG PA
Sbjct: 181 EVFKLAVSSFKVCDWSLFGAPA 202

[Close]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL
Match: A0A1S3BEU3 (probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103489108 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.9e-97
Identity = 183/202 (90.59%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M  DFS+E  LFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
           GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIP+V TTAVGQMAISKGRQG
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLKGVGTDVLI AYEPI+INPLSESASSVGSGL TPAS SG +PM 
Sbjct: 121 REAQNIVRVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLTTPASHSGYIPMP 180

Query: 181 EVFKLAASSFKVYDWSVFGPPA 203
           EVFKLA SSFKV DWS+FG PA
Sbjct: 181 EVFKLAVSSFKVCDWSLFGAPA 202

[Close]

BLAST of Lcy13g002770 vs. NCBI nr
Match: XP_038892350.1 (ran guanine nucleotide release factor [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 188/202 (93.07%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MP DF SE  LFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MPADFCSERGLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCYGNIPSVVTTAVGQM+ISKGRQG
Sbjct: 61  CDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYGNIPSVVTTAVGQMSISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLKGVGTDVLI AYEPI+INPLSESASSVGSGLATPASQSGCMPM+
Sbjct: 121 REAQNIVRVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLATPASQSGCMPMA 180

Query: 181 EVFKLAASSFKVYDWSVFGPPA 203
           EVFKLA SSFKVYDWS+FG  A
Sbjct: 181 EVFKLAVSSFKVYDWSLFGTSA 202

[Close]

BLAST of Lcy13g002770 vs. NCBI nr
Match: XP_023552843.1 (probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99
Identity = 188/199 (94.47%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFP+RFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPIRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYANIPSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPM 
Sbjct: 121 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMP 180

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWS+FG
Sbjct: 181 EVFKLALSSFKVCDWSIFG 199

[Close]

BLAST of Lcy13g002770 vs. NCBI nr
Match: XP_022987588.1 (probable ran guanine nucleotide release factor [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 3.1e-99
Identity = 189/199 (94.97%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYANIPSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGLATPASQSGC+PM 
Sbjct: 121 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCIPMP 180

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWSVFG
Sbjct: 181 EVFKLALSSFKVCDWSVFG 199

[Close]

BLAST of Lcy13g002770 vs. NCBI nr
Match: KAG6601426.1 (putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371.3 bits (952), Expect = 5.2e-99
Identity = 188/199 (94.47%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFP+RFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 50  MAEDFSSERALFGGAIVSTFPIRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 109

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIE PGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 110 EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEVPGLCYANIPSVVTTAVGQMAISKGRQG 169

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPM 
Sbjct: 170 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMP 229

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWSVFG
Sbjct: 230 EVFKLALSSFKVCDWSVFG 248

[Close]

BLAST of Lcy13g002770 vs. NCBI nr
Match: XP_022957477.1 (probable ran guanine nucleotide release factor [Cucurbita moschata])

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98
Identity = 187/199 (93.97%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M EDFSSE ALFGGAIVSTFP+RFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPIRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIE PGLCY NIPSVVTTAVGQMAISKGRQG
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEVPGLCYANIPSVVTTAVGQMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQNIVRVYLANLRLK VGTDVLICAYEPILINPLSESASSVGSGL TPASQSGCMPM 
Sbjct: 121 REAQNIVRVYLANLRLKAVGTDVLICAYEPILINPLSESASSVGSGLTTPASQSGCMPMP 180

Query: 181 EVFKLAASSFKVYDWSVFG 200
           EVFKLA SSFKV DWSVFG
Sbjct: 181 EVFKLALSSFKVCDWSVFG 199

[Close]

BLAST of Lcy13g002770 vs. TAIR 10
Match: AT1G69680.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 294.3 bits (752), Expect = 7.6e-80
Identity = 149/202 (73.76%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 1   MPEDFSSEHALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M  +  S   LFGGAI + FP RFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFK +V
Sbjct: 1   MSVELCSVRPLFGGAISTVFPQRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKAEV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPSVVTTAVGQMAISKGRQG 120
           GD GSA WFL DLA+EQDAEG  +IEQS VIEAPGL + NI +V TTA+G+MAISKGRQG
Sbjct: 61  GDIGSASWFLNDLASEQDAEGFQLIEQSEVIEAPGLSFRNISAVATTAIGEMAISKGRQG 120

Query: 121 REAQNIVRVYLANLRLKGVGTDVLICAYEPILINPLSESASSVGSGLATPASQSGCMPMS 180
           REAQN+VRVY+AN+RLKGV TDVL+ AYEPILINPLSESA +VGSGLA PASQSG MPM 
Sbjct: 121 REAQNLVRVYVANIRLKGVDTDVLVTAYEPILINPLSESADAVGSGLAVPASQSGKMPMC 180

Query: 181 EVFKLAASSFKVYDWSVFGPPA 203
           ++ K + S+FKV DW++FG  A
Sbjct: 181 DIIKQSLSTFKVNDWNLFGSSA 202

The following BLAST results are available for this feature:

BLAST of Lcy13g002770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A3KPP3	1.3e-15	33.16	Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1	[more]
Q54ML6	2.9e-15	32.02	Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44...	[more]
Q32PE2	3.3e-11	29.90	Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1	[more]
Q9HD47	9.5e-11	29.47	Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=...	[more]
O75002	1.4e-09	27.08	Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of Lcy13g002770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJW2	1.5e-99	94.97	probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GZ86	7.4e-99	93.97	probable ran guanine nucleotide release factor OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1DAG6	6.2e-98	92.57	probable ran guanine nucleotide release factor OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0KU01	2.4e-97	91.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1	[more]
A0A1S3BEU3	6.9e-97	90.59	probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Lcy13g002770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892350.1	1.4e-99	93.07	ran guanine nucleotide release factor [Benincasa hispida]	[more]
XP_023552843.1	2.4e-99	94.47	probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo]	[more]
XP_022987588.1	3.1e-99	94.97	probable ran guanine nucleotide release factor [Cucurbita maxima]	[more]
KAG6601426.1	5.2e-99	94.47	putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma ...	[more]
XP_022957477.1	1.5e-98	93.97	probable ran guanine nucleotide release factor [Cucurbita moschata]	[more]

BLAST of Lcy13g002770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69680.1	7.6e-80	73.76	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 6..199 e-value: 5.1E-44 score: 152.3
None	No IPR available	PANTHER	PTHR15837:SF4	BNAA07G24140D PROTEIN	coord: 6..199
IPR007681	Ran-interacting Mog1 protein	PFAM	PF04603	Mog1	coord: 10..150 e-value: 3.1E-35 score: 121.5
IPR007681	Ran-interacting Mog1 protein	PANTHER	PTHR15837	RAN GUANINE NUCLEOTIDE RELEASE FACTOR	coord: 6..199
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 8..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g002770.1	Lcy13g002770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity
molecular_function	GO:0031267	small GTPase binding