Lcy13g002690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g002690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	binding partner of ACD11 1-like
Location	Chr13: 2366606 .. 2369877 (-)
RNA-Seq Expression	Lcy13g002690
Synteny	Lcy13g002690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCGGGAGCTATTCTCCAGTTTTTCTTCTGAAATTTCGTTTTCTGAAAGTCAATTCGTTTGTCTTCCTCTGCAAGTCTTACATTTCAACGAACCAAGAGACGAATCAAGTTACTGTTGCTGCGGAAACATGAATCCTGATGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAGGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGGTATTCATTTCTTCCGTATCCTGCATTTAATTCCATGTCCTCGAGTATGTAATTTTGCCATCTTTACATCTTTAGTGAACCAGTCGTTTTATTTAATAGATAGGTATCAAACGATCTTTCTGAATGCGATTATGGCGTTTTTGTTAGATTTTGTTTTTTTCGAAAGCGCTTGGTTTGAGGATTTTTTGTTTCGTGAAAACAGATCTGGTGAAGATGCCTGCACTGCCTATGTGTCATTTAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGTGAGTATTTTAATTCCTAATAAGCTTCAGGCCTACAATACAGTATTTGATTGAATTCTTCCATTACTCTTTATTTAGAGCTACAGGGTGTGCGCGCGCAATCTGATATTTTATAGTCATGTGATCTTTATATTTTTTTAATTTCATTTATGATATTTATTTCTCTGTCTAGCTTTGATATTATATAAACACGAGAATTTTACGGATGCTCAAATTTAAACGATATACAATTTCAAAGTATTAATTTTTCTGAAGAATATAATGATATAGATCTAAGGTATTGCATTTGTAGAATAGTGAAAAGCGCATTCTTGAGTTGTGACTTGTGAGCCACATGTTTAATTTATAAATTTCAAATTAAATCTCTCGTTTTAAAAACTTCTGAGAACACAGTAGTGCCTTAGTAGACATTATTATGTAGTAAACTTGTGTCGATATGGCTTATGTGGCAATTTTGATTGAAAGAAGAAAACCCGTGGCAACATTTTTCTTAATTGAAAAATCTATAGGCACAATTTGCTCTGGCTTCCTTAGGGGAAGGAACCCTTCATCTGGCTTTGGCGAAGGACGTCTCTGTCTTCCCTCAATGAAGGAACCGATTGCCTTGTGGAGGAATGAACCCTTCGTTTGCTGGATTCCTATAAATAGTGAAGGGTGCCTTCATTTCCTCCAGTAAGGGCCTTTGTTAGAGAAGAAGACCTATTGAGTGTGCTTAGACTTTCTTTAAATGATTATAACAAACAATAATATAGTTATTAAAATTGAAATAATAAAAATAAATAAAAGAGAGATTTGCTTTGGAATAATGAAAATTGCTTCATGAGCATTGAACCATAAATTATGGTTATGGCTTCATCAAATTTGAAAGAGCTAATACGAATAAGCATGAACATGGATATAACTACACATCGTATTAAAAAAAGTTGGACCCGTTTATCATTGTGCAGACATGGCATTAAAATATTTTAGGCAACTGATAAATCTGAATCCTAGGCATATGGCAAATCTAAATCTGTGATTAGAAAGACAATAACATAGTTGTTGTTTAATCCATAATTGGTAGTATAGTCCTTGTTGAATCTGCAAGACACATATATCTCACCTTCTCGTTTGCTGCAAATTTGCATTGTTTTTAGGTATGAGTTTAATGAAATTTTGACCACGTCCGATGAATTTCCTACTGGATGCCAATGATAAAGGAGTTTCAATATGGATACTAAATTTCAGTTTGTAACAGAATGCCTTATTAAATGTTCTGGATTGATCATTCTGTTTATGCTTTGTCTACTCTTAGGTTTTTATCAACGTTCATTTCTTTTCATGTGCTTAATTCTGTGCGAAATACCTTGATTTACTTGATCGAACTTCATGGAGTTGGTTTTTCCACAAGGAGACAAACGATCGTTATTTTTCATCCCTTGTATTCCACCTGATAATAATGATCATGCTTTTAGTGTTCAATATCTGATTATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTGTAAGTGTCAAAAATGATGTTTATTAATATTTCCTACCTGTTGCAATTTGCAATGTTTTCGTCCTATGGACAATCTCTGATTAATTGATGAGTTCCCCATCTTGTAGTCGACACAAAGAAGCGAGTTTGTTTCCAGCGCTGGTAGTGCAGTGACCATGGCCCAGGAAGTGGTCCAAACCATGCTGGCCATGGGTTACGTCCTGGGCAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGACTTGAGTAATAGAATTGGCCTTACTGACATGATTGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGAGAAGTACCACGTATTGCAGGCAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCCGATACTGTGGTTAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGGATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAAGAAGTTAGAGAGTCCTGCTCATCCATTGTAAATAAAGAAATTTAAATACATACCTTAGAATTTGTAAGTTTATACTGATACTTTATCAGAGTGTACATTCATCTGATAGCTGTATGTAGAAATTTTAAATTTCATAGAGTTCAATCACACTAGTTCTTTGAACCCCACAAGTTTGCTAAATTTTAACCTCAGACTCGGTAAAAACCAGTCAGAGAGTCTTTATGGAGTCATTGTCAGTTTGTAAATTCAGTATCCTTGGAGTCAAATCTGTTCTTTTAGCACTCTTTGGAAACGTCTCCCAAATTGTACTTTTTACAATCCTGCTTTTAGATTGTCTTCTCCTTAATCAATTTGTTAGTTGAAGTTACTCTCGAATTTGATGAAACTTATTTTGTTCGTTTAGATTGTTGTATTGTCTAATAGGGGAGGCCATATGGATGGATGCTTGATTTGGGCGCAACAAGAGTGAAGTCCCGCATGCAATATCATGATTTTGCCGCCTAGGATGGCTCCTTCCAGCTGTAGTTGTCTGAGACTTGCAACTCGCTCCAGCAGGCAATAGCTTCCTGCAAGTTACAGGTCGGTCTGGTCTTCAATTTTTTGCTGTGGACTGCGGTCTCA

mRNA sequence

TCCTCGGGAGCTATTCTCCAGTTTTTCTTCTGAAATTTCGTTTTCTGAAAGTCAATTCGTTTGTCTTCCTCTGCAAGTCTTACATTTCAACGAACCAAGAGACGAATCAAGTTACTGTTGCTGCGGAAACATGAATCCTGATGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAGGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGTCATTTAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTTCGACACAAAGAAGCGAGTTTGTTTCCAGCGCTGGTAGTGCAGTGACCATGGCCCAGGAAGTGGTCCAAACCATGCTGGCCATGGGTTACGTCCTGGGCAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGACTTGAGTAATAGAATTGGCCTTACTGACATGATTGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGAGAAGTACCACGTATTGCAGGCAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCCGATACTGTGGTTAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGGATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAAGAAGTTAGAGAGTCCTGCTCATCCATTGTAAATAAAGAAATTTAAATACATACCTTAGAATTTGTAAGTTTATACTGATACTTTATCAGAGTGTACATTCATCTGATAGCTGTATGTAGAAATTTTAAATTTCATAGAGTTCAATCACACTAGTTCTTTGAACCCCACAAGTTTGCTAAATTTTAACCTCAGACTCGGTAAAAACCAGTCAGAGAGTCTTTATGGAGTCATTGTCAGTTTGTAAATTCAGTATCCTTGGAGTCAAATCTGTTCTTTTAGCACTCTTTGGAAACGTCTCCCAAATTGTACTTTTTACAATCCTGCTTTTAGATTGTCTTCTCCTTAATCAATTTGTTAGTTGAAGTTACTCTCGAATTTGATGAAACTTATTTTGTTCGTTTAGATTGTTGTATTGTCTAATAGGGGAGGCCATATGGATGGATGCTTGATTTGGGCGCAACAAGAGTGAAGTCCCGCATGCAATATCATGATTTTGCCGCCTAGGATGGCTCCTTCCAGCTGTAGTTGTCTGAGACTTGCAACTCGCTCCAGCAGGCAATAGCTTCCTGCAAGTTACAGGTCGGTCTGGTCTTCAATTTTTTGCTGTGGACTGCGGTCTCA

Coding sequence (CDS)

ATGAATCCTGATGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAGGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGTCATTTAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTTCGACACAAAGAAGCGAGTTTGTTTCCAGCGCTGGTAGTGCAGTGACCATGGCCCAGGAAGTGGTCCAAACCATGCTGGCCATGGGTTACGTCCTGGGCAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGACTTGAGTAATAGAATTGGCCTTACTGACATGATTGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGAGAAGTACCACGTATTGCAGGCAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCCGATACTGTGGTTAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGGATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAA

Protein sequence

MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVKTMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRGLEH

Homology

[Close]

BLAST of Lcy13g002690 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32
Identity = 92/241 (38.17%), Postives = 139/241 (57.68%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 66
           +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYV+FK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQEVVQT 126
           +I DQ V I    ++       S P+  H E  +          S A S V  A++VV +
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQS----------SGAESVVQKAEDVVSS 126

Query: 127 MLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGF----EAVKTM 186
           MLA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  + AG     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRGL 244
           D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A +R A+ A ++G +  
Sbjct: 187 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 227

[Close]

BLAST of Lcy13g002690 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 61/234 (26.07%), Postives = 99/234 (42.31%), Query Frame = 0


Query: 8   VEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGAT 67
           V VT +SP+ TEK + DFF+F G +  +   +SGE   TA + F+   + +TA LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGETQ-TAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQE----- 127
           +   ++ IT                    ED   AST        AG      QE     
Sbjct: 65  LGQNKIQIT-------------------SEDGGAASTTDQ---GGAGGDQAARQEDKPRS 124

Query: 128 -VVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVKT 187
            ++  +L+ GY L   TL K+   D+S+ VS+                 ++ +    V++
Sbjct: 125 AIISELLSRGYHLSDVTLEKSIQLDQSYGVSSK-------------FKGILESALSGVRS 184

Query: 188 MDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAA 236
           ++E+YHV +              A +D + R+S  S  + +   AL+ AA  +A
Sbjct: 185 VNERYHVTEKANEV-----DNKFAISDKLNRTS--SLVSTYFHKALETAAGTSA 195

[Close]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL
Match: A0A6J1HUH9 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467575 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 223/244 (91.39%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG+HEED TPAS QRS+F S+ G+AV+MA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALFISDAL+RAAK AADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL
Match: A0A6J1G2B1 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 223/244 (91.39%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG+HEED TP S QRS+FVS+AG+AV+MA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.8e-119
Identity = 223/244 (91.39%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EEDSTPAS QRS+F+SSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           QEVV+TMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAG+EAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           ++DEKYHVL+ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117
Identity = 221/244 (90.57%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EEDST AS QRS+F+SSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           QEVV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           ++DEKYHVL+ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117
Identity = 221/244 (90.57%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EEDST AS QRS+F+SSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           QEVV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           ++DEKYHVL+ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. NCBI nr
Match: XP_023541311.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119
Identity = 224/244 (91.80%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG HEED TPAS QRS+FVS+AG+AV+MA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGDHEEDGTPASAQRSQFVSTAGTAVSMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. NCBI nr
Match: XP_038892042.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119
Identity = 223/244 (91.39%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKDVLDFFAFSGAI+LVEI+RSG+DACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIIRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGA I+DQRVCITRWG+FDDEFGFWSR SGHHEEDSTPAS QRS+F+SSAG+AVTMA
Sbjct: 61  CLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           QEVV+TMLAMGYVLGKDTLTKAKA DESHQVS TAAAKVADLS+RIGLTDMIGAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATG+TAAAAADTVVRSSYFSRGALF+SDAL+RAAKVAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. NCBI nr
Match: XP_022968306.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119
Identity = 223/244 (91.39%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG+HEED TPAS QRS+F S+ G+AV+MA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALFISDAL+RAAK AADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. NCBI nr
Match: XP_022945905.1 (binding partner of ACD11 1-like [Cucurbita moschata])

HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119
Identity = 223/244 (91.39%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG+HEED TP S QRS+FVS+AG+AV+MA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 245
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Lcy13g002690 vs. NCBI nr
Match: KAG7013155.1 (Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119
Identity = 223/244 (91.39%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           MNP GYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
           CLLSGATIVDQRVCITRWGHFD+EF FWSRPSG+HEED TP S QRS+FVS+AG+AV+MA
Sbjct: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VV+TMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG+EA K
Sbjct: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277

Query: 181 TMDEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSR 240
           TMDEKYHVLQ TKSAISATGRTAAAAADTVVRSSYFSRGALF+SDAL+RAAK AADLGSR
Sbjct: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337

Query: 241 GLEH 245
           GLEH
Sbjct: 338 GLEH 341

[Close]

BLAST of Lcy13g002690 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-78
Identity = 155/238 (65.13%), Postives = 184/238 (77.31%), Query Frame = 0


Query: 5   GYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLS 64
           GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GATIVDQRVCITRWGHFDDEFGFWSRPS-GHHEEDSTPASTQRSEFVSSAGSAVTMAQEV 124
           GATI+DQRVCITRWG   +EF FW+  S G  +E  +    QRSEF  +AG AVT AQEV
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQEV 125

Query: 125 VQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVKTMD 184
           V+ MLA G+VLGKD L+KAKAFDESH VSA A A+V+ L  RIGLTD I  G EAV+  D
Sbjct: 126 VKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTD 185

Query: 185 EKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRG 242
           ++YHV    KSA+ ATGRTAAAAA +VV SSYFS GAL++S AL+RAAK A+DLG+RG
Sbjct: 186 QRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of Lcy13g002690 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 211.5 bits (537), Expect = 7.8e-55
Identity = 127/252 (50.40%), Postives = 162/252 (64.29%), Query Frame = 0


Query: 1   MNPDGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60
           M P GY  +VT LSP+ATEKDV  FF+  G +ELVEI     DA TAYV+F+DAY+ + A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMA 120
            LLSGATIVDQ V I+ +G +  E       +   EED +   T+   F SS G A+T+A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESN-----NLRQEEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QEVVQTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGFEAVK 180
           Q+VVQTMLA GYVL KD + KAKA DES + S+  A K+A++S+ +GLT  I +  E V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 TMDEKYHVLQATKSAI-----------SATGRTAAAAADTVVRSSYFSRGALFISDALDR 240
           + DEKYH    TKSA+           + TG+ AAAAA +VV S YF+ GAL+ SDAL R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 241 AAKVAADLGSRG 242
           AAK AA +G  G
Sbjct: 241 AAKAAAHIGGGG 247

[Close]

BLAST of Lcy13g002690 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 91/241 (37.76%), Postives = 140/241 (58.09%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 66
           TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYV+FKD    ETA LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQEVVQT 126
           TIVD  V ++    +        + S        P  + +S    +  S +  A++VV +
Sbjct: 65  TIVDSSVIVSMAPDY--------QLSPEALASLEPKDSNKSP--KAGDSVLRKAEDVVSS 124

Query: 127 MLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGF----EAVKTM 186
           MLA G++LGKD + KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E V+ +
Sbjct: 125 MLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREV 184

Query: 187 DEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRGL 244
           D+KY V + TKSAI+A  +T + A   ++++ Y   GA +++ A ++ AK A ++G +  
Sbjct: 185 DQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAK 235

[Close]

BLAST of Lcy13g002690 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 88/241 (36.51%), Postives = 138/241 (57.26%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 66
           TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYV+FKD    ETA LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQEVVQT 126
           TIVD  V +T    +         P      +S   S + S       S    A++VV  
Sbjct: 65  TIVDSSVTVTMSPDYQ------LPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSG 124

Query: 127 MLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----FEAVKTM 186
           M++ G+VLGKD + KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E VK +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 187 DEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRGL 244
           D+K+ V + TKSAI+A  +T + A   ++++ Y   GA +++ A +R +K A ++G +  
Sbjct: 185 DQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAK 239

[Close]

BLAST of Lcy13g002690 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 92/241 (38.17%), Postives = 138/241 (57.26%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 66
           +V+V  LS  ATE D+ +FF+FSG +E ++I  S E   +AYV+FK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDSTPASTQRSEFVSSAGSAVTMAQEVVQT 126
           +I DQ V I    ++       S P+  H E  +          S A S V  A++VV +
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQS----------SGAESVVQKAEDVVSS 126

Query: 127 MLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGF----EAVKTM 186
           MLA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  + AG     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DEKYHVLQATKSAISATGRTAAAAADTVVRSSYFSRGALFISDALDRAAKVAADLGSRGL 244
           D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A +R A+ A ++G +  
Sbjct: 187 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 228

The following BLAST results are available for this feature:

BLAST of Lcy13g002690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.8e-32	38.17	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	7.7e-07	26.07	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Lcy13g002690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUH9	3.5e-119	91.39	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G2B1	3.5e-119	91.39	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE...	[more]
A0A0A0KSM6	7.8e-119	91.39	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV...	[more]
A0A5D3CVI0	2.5e-117	90.57	Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BET5	2.5e-117	90.57	binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1	[more]

BLAST of Lcy13g002690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541311.1	4.2e-119	91.80	binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038892042.1	4.2e-119	91.39	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_022968306.1	7.2e-119	91.39	binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022945905.1	7.2e-119	91.39	binding partner of ACD11 1-like [Cucurbita moschata]	[more]
KAG7013155.1	7.2e-119	91.39	Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lcy13g002690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14340.1	1.7e-78	65.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01210.1	7.8e-55	50.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	1.8e-35	37.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.4e-35	36.51	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	1.5e-34	38.17	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..77 e-value: 5.8E-4 score: 29.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 2.3E-5 score: 24.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..72 score: 8.944591
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..84 e-value: 2.0E-7 score: 32.9
None	No IPR available	PANTHER	PTHR32343:SF26	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..242
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 8..76 e-value: 1.14708E-34 score: 117.161
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g002690.1	Lcy13g002690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding