Homology
BLAST of Lcy13g002610 vs. ExPASy Swiss-Prot
Match:
Q1PFA6 (Pentatricopeptide repeat-containing protein At2g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E22 PE=2 SV=2)
HSP 1 Score: 633.3 bits (1632), Expect = 2.9e-180
Identity = 303/608 (49.84%), Postives = 435/608 (71.55%), Query Frame = 0
Query: 5 IARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGF 64
++ LV G ++ + +S P+ F FPPL K+CAKL V QG++LH ++KTGF
Sbjct: 11 VSNLVTGGTSLDVILSHS--------PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF 70
Query: 65 LADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFEL 124
DV+ ATAL MY+K DALKV DEMP R +AS+N +SG NG +A R+F
Sbjct: 71 FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD 130
Query: 125 VNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGC 184
N++T+ ++L C + GMQ+HC A+K GF+M+VYV T+L++MYS C E
Sbjct: 131 ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 190
Query: 185 AAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACS 244
AA++F+ + +K+VV++NA+ISGL+ N + +V +F M + +PN VT + ++AC+
Sbjct: 191 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 250
Query: 245 NLSHLGFGRQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWN 304
+L +L +GRQ+H L +K + + +VGTAL+DMYSKC W+ A+ +F E T NLI+WN
Sbjct: 251 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 310
Query: 305 SLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSA 364
S+I+GMM+N Q E A+ELFE L+S L+PDSATWNS+ISG +Q G+ IEAFK+F RM S
Sbjct: 311 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 370
Query: 365 GIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSA 424
+VPSL LTSLLS CS++ L++GKEIH I++ D+F+ T+LIDMYMKCG S A
Sbjct: 371 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 430
Query: 425 RKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICS 484
R++FD+F+ KPKD +FWN MISGYG++GE +SA ++F+ + EEKV+P++ATFT++L CS
Sbjct: 431 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 490
Query: 485 HCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMSSLA 544
HCG V+KG Q FR+M ++Y +P +H CMID+LGR+G+L +A+E+++++ EPS S +
Sbjct: 491 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS 550
Query: 545 SLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKG 604
SLLG+C H DP LGEE A++++ELEP+NP PFVILS+IYA LERW+DVE +R++++ K
Sbjct: 551 SLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQ 610
Query: 605 LRKLSGIS 612
L KL G+S
Sbjct: 611 LVKLPGLS 610
BLAST of Lcy13g002610 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 376.7 bits (966), Expect = 5.0e-103
Identity = 214/604 (35.43%), Postives = 338/604 (55.96%), Query Frame = 0
Query: 16 EALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYAATALT 75
+AL + + + P + F L K C + GK +H L+K+GF D++A T L
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 76 DMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSLRPNTI 135
+MY K +A KVFD MP R+L S NT+++G+S NG AL + + + +L+P+ I
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 136 TIVNLL---SACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAKVFQDM 195
TIV++L SA ++ G +IH +A++ GF V ++TAL+ MY+ C + A ++F M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 196 SNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLSHLGFG 255
+NVVS+N+ I + N+ P+ + IF+ M++ KP V++ L AC++L L G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERG 357
Query: 256 RQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLIAGMML 315
R IH L++++ D +V V +L+ MY KC
Sbjct: 358 RFIHKLSVELGLDRNVSVVNSLISMYCKC------------------------------- 417
Query: 316 NDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSAGIVPSLNS 375
+ + A +F L+S L +WN+MI G AQ+GRPI+A YF +M+S + P +
Sbjct: 418 -KEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 477
Query: 376 LTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKLFDQFD 435
S+++ + LS H K IH +RS + +VF+ TAL+DMY KCG + AR +FD
Sbjct: 478 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 537
Query: 436 FKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCGQVDKG 495
+ T WNAMI GYG +G K+A ++F+ M + ++PN TF S++ CSH G V+ G
Sbjct: 538 ERHVTT--WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 597
Query: 496 WQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELP-EPSMSSLASLLGACS 555
+ F MM + Y ++ DHY M+D+LGRAG+L +A + + ++P +P+++ ++LGAC
Sbjct: 598 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 657
Query: 556 LHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLRKLSGI 615
+HK+ E+ A R+ EL P + V+L+NIY W+ V +VR M +GLRK G
Sbjct: 658 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 682
BLAST of Lcy13g002610 vs. ExPASy Swiss-Prot
Match:
O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)
HSP 1 Score: 370.9 bits (951), Expect = 2.7e-101
Identity = 213/591 (36.04%), Postives = 324/591 (54.82%), Query Frame = 0
Query: 31 PHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYAATALTDMYVKFLHFEDALKV 90
P +F FP + KA L G+M+HT ++K+G++ DV A++L MY KF FE++L+V
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 91 FDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSLRPNTITIVNLLSACAS---V 150
FDEMP R++AS NT+IS F +G +AL LF + PN++++ +SAC+ +
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 151 AHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAKVFQDMSNKNVVSFNAYISGL 210
G +IH +K GF++D YV +AL+ MY C+ + A +VFQ M K++V++N+ I G
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 211 LLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLSHLGFGRQIHALTIK-IDSDD 270
+ + ++I N M +P+ TL S+L ACS +L G+ IH I+ + + D
Sbjct: 285 VAKGDSKSCVEIL-NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 344
Query: 271 VIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLIAGMMLNDQSEIAMELFESLE 330
+ V +L+D+Y KCG A +F+
Sbjct: 345 IYVNCSLIDLYFKCGEANLAETVFS----------------------------------- 404
Query: 331 SHKLQPDSA-TWNSMISGLAQSGRPIEAFKYFHRMQSAGIVPSLNSLTSLLSLCSNLSAL 390
K Q D A +WN MIS G +A + + +M S G+ P + + TS+L CS L+AL
Sbjct: 405 --KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 464
Query: 391 RHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKLFDQFDFKPKDTIFWNAMIS 450
GK+IH S + D L +AL+DMY KCG A ++F+ KD + W MIS
Sbjct: 465 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN--SIPKKDVVSWTVMIS 524
Query: 451 GYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCGQVDKGWQFFRMMNKKYDLQ 510
YG +G+ + A FD M + ++P+ T ++L C H G +D+G +FF M KY ++
Sbjct: 525 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 584
Query: 511 PDRDHYSCMIDILGRAGQLGKARELLEELPEPSMSS--LASLLGACSLHKDPKLGEETAL 570
P +HYSCMIDILGRAG+L +A E++++ PE S ++ L++L AC LH + LG+ A
Sbjct: 585 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 644
Query: 571 RISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLRKLSGISSIE 615
+ E P + +++L N+YA E W RVR M + GLRK G S IE
Sbjct: 645 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
BLAST of Lcy13g002610 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 360.5 bits (924), Expect = 3.7e-98
Identity = 222/621 (35.75%), Postives = 340/621 (54.75%), Query Frame = 0
Query: 18 LSMYSQHHSASLPPH-NFIFP-------------PLFKACAKLNSVPQGKMLHTHLIKTG 77
++++S SLP H NF P L + C L Q K H H+I+TG
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLR---QLKQTHGHMIRTG 60
Query: 78 FLADVYAATALTDMYV--KFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRL 137
+D Y+A+ L M F E A KVFDE+P N + NT+I ++ ++
Sbjct: 61 TFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWA 120
Query: 138 F-ELVNRGSLRPNTITIVNLLSACASVAH---GMQIHCWAIKLGFQMDVYVATALLTMYS 197
F ++V+ PN T L+ A A V+ G +H A+K DV+VA +L+ Y
Sbjct: 121 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 180
Query: 198 TCEEVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLA 257
+C ++ A KVF + K+VVS+N+ I+G + P L++FK ME K + VT+
Sbjct: 181 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK-MESEDVKASHVTMV 240
Query: 258 SVLSACSNLSHLGFGRQIHA-LTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGT 317
VLSAC+ + +L FGRQ+ + + + ++ + A++DMY+KCG+ + A LF+
Sbjct: 241 GVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 300
Query: 318 NNLITWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKY 377
+N +TW +++ G +++ E A E+ S+ Q D WN++IS Q+G+P EA
Sbjct: 301 DN-VTWTTMLDGYAISEDYEAAREVLNSMP----QKDIVAWNALISAYEQNGKPNEALIV 360
Query: 378 FHRMQSAGIVPSLNSLT--SLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMY 437
FH +Q + LN +T S LS C+ + AL G+ IH+ + I M+ + +ALI MY
Sbjct: 361 FHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 420
Query: 438 MKCGRLSSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVAT 497
KCG L +R++F+ + +D W+AMI G +G A D+F +M E V+PN T
Sbjct: 421 SKCGDLEKSREVFNSVE--KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 480
Query: 498 FTSLLCICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEEL 557
FT++ C CSH G VD+ F M Y + P+ HY+C++D+LGR+G L KA + +E +
Sbjct: 481 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 540
Query: 558 P-EPSMSSLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVE 615
P PS S +LLGAC +H + L E R+ ELEP+N V+LSNIYA+L +W++V
Sbjct: 541 PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS 600
BLAST of Lcy13g002610 vs. ExPASy Swiss-Prot
Match:
Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 1.8e-97
Identity = 208/609 (34.15%), Postives = 337/609 (55.34%), Query Frame = 0
Query: 12 GFYIEALSMYSQH-HSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYA 71
G++ EA+ +Y + + P + FP + + C + + +GK +H H+++ G+ D+
Sbjct: 174 GYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDV 233
Query: 72 ATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSL 131
AL MYVK + A +FD MP R++ S N MISG+ NG E L LF + S+
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 132 RPNTITIVNLLSACASVAH---GMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAK 191
P+ +T+ +++SAC + G IH + I GF +D+ V +L MY A K
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 192 VFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLS 251
+F M K++VS+ ISG N +P +D ++ MM+ KP+ +T+A+VLSAC+ L
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLG 413
Query: 252 HLGFGRQIHALTIKID-SDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLI 311
L G ++H L IK VIV L++MYSKC A ++F+ I N+I+W S+I
Sbjct: 414 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH-NIPRKNVISWTSII 473
Query: 312 AGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSAGIV 371
AG+ LN++ FE+L F R +
Sbjct: 474 AGLRLNNR------CFEAL------------------------------IFLRQMKMTLQ 533
Query: 372 PSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKL 431
P+ +LT+ L+ C+ + AL GKEIHA +R+ + +D FL AL+DMY++CGR+++A
Sbjct: 534 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA--- 593
Query: 432 FDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCG 491
+ QF+ + KD WN +++GY G+ ++FDRM++ +V+P+ TF SLLC CS
Sbjct: 594 WSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ 653
Query: 492 QVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELP-EPSMSSLASL 551
V +G +F M + Y + P+ HY+C++D+LGRAG+L +A + ++++P P + +L
Sbjct: 654 MVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 713
Query: 552 LGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLR 611
L AC +H LGE +A I EL+ K+ +++L N+YA+ +W++V +VR MM + GL
Sbjct: 714 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 740
Query: 612 KLSGISSIE 615
+G S +E
Sbjct: 774 VDAGCSWVE 740
BLAST of Lcy13g002610 vs. ExPASy TrEMBL
Match:
A0A6J1K9P7 (pentatricopeptide repeat-containing protein At2g02750 OS=Cucurbita maxima OX=3661 GN=LOC111492916 PE=4 SV=1)
HSP 1 Score: 1069.3 bits (2764), Expect = 5.9e-309
Identity = 525/614 (85.50%), Postives = 562/614 (91.53%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL HNFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSHNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MPRMV+D+FK+MME P GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPRMVIDVFKSMMERPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AHN+ NER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHNVLNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A G+P +AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHAHLGQPAKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTS LS+CS+LSALRHGKEIHAQ + IHMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSFLSICSDLSALRHGKEIHAQVTKRFIHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQFF+MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFFKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPFVILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFVILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. ExPASy TrEMBL
Match:
A0A6J1GYX9 (pentatricopeptide repeat-containing protein At2g02750 OS=Cucurbita moschata OX=3662 GN=LOC111458155 PE=4 SV=1)
HSP 1 Score: 1067.0 bits (2758), Expect = 2.9e-308
Identity = 522/614 (85.02%), Postives = 563/614 (91.69%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL +NFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSYNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MP MV+D+FK+MMECP GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPPMVIDVFKSMMECPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AH +FNER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHKVFNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A+ G+P++AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHARLGQPVKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTSLL +CS+LSALRHGKEIHAQ +S HMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSLLFVCSDLSALRHGKEIHAQVTKSFTHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQF +MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFLKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPF+ILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFIILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. ExPASy TrEMBL
Match:
A0A6J1DCC8 (pentatricopeptide repeat-containing protein At2g02750 OS=Momordica charantia OX=3673 GN=LOC111019194 PE=4 SV=1)
HSP 1 Score: 1050.0 bits (2714), Expect = 3.7e-303
Identity = 513/614 (83.55%), Postives = 555/614 (90.39%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
MKREI RLVA G YIEALS+YSQHHSASL PH F+FPPLFKACAKLN VPQGKMLHTHL+
Sbjct: 1 MKREIVRLVASGLYIEALSIYSQHHSASLRPHKFLFPPLFKACAKLNFVPQGKMLHTHLV 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
KTGF+ADVYAATALTDMY+K LHF+DALKVFDEMPHRNLASLN MISGF NGSRGEALR
Sbjct: 61 KTGFIADVYAATALTDMYMKLLHFDDALKVFDEMPHRNLASLNAMISGFLFNGSRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ E+VN GSLRPN+ITIVNLLS C VAHGMQIHCWA KLGFQ+DVYVATALLTMY TCE
Sbjct: 121 MVEIVNSGSLRPNSITIVNLLSGCERVAHGMQIHCWATKLGFQVDVYVATALLTMYFTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
EVG AAKVFQ+M NKNVVS+NAYISGLLLNDMPR VLD+FK+MMECPCGKPNSVTLASVL
Sbjct: 181 EVGFAAKVFQEMWNKNVVSYNAYISGLLLNDMPRKVLDVFKSMMECPCGKPNSVTLASVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LS LGFGRQ+HALT++I +DDV+VGTALVDMYSKCGAWQWA+N+F ER T NL
Sbjct: 241 SACSDLSDLGFGRQVHALTVRIQNDDVMVGTALVDMYSKCGAWQWAYNVFKERKRTGNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNS+IAGMMLN QSEIAMELFE LE KLQPDSATWNSMISG A+ GRP+EAFKYFHRM
Sbjct: 301 TWNSVIAGMMLNGQSEIAMELFELLEFQKLQPDSATWNSMISGFARLGRPVEAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPS+ SLTSLLS+C++LSALRHGKEIHAQ + +IH+D+FLATALID YMKCG
Sbjct: 361 QSAGAVPSIKSLTSLLSICADLSALRHGKEIHAQTTKRVIHLDMFLATALIDTYMKCGNF 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
S AR+LFDQFD KPKDTIFWN MISGYGRNGEN AFD+FDRMLEE V+PN ATFTSLL
Sbjct: 421 SWARRLFDQFDPKPKDTIFWNTMISGYGRNGENTCAFDIFDRMLEENVRPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSH GQV+KGWQ FRMMNK+Y LQP RDH SCMID+LGRAGQLGKAR+LLEELPEPS+S
Sbjct: 481 ICSHSGQVEKGWQLFRMMNKQYGLQPYRDHCSCMIDLLGRAGQLGKARKLLEELPEPSIS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLH D KLGEE ALRISELEPKNPLPF ILSNIYAEL RW+DVERVREMMN
Sbjct: 541 SLASLLGACSLHNDSKLGEEMALRISELEPKNPLPFSILSNIYAELGRWRDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRKLSGISSIE
Sbjct: 601 DKGLRKLSGISSIE 614
BLAST of Lcy13g002610 vs. ExPASy TrEMBL
Match:
A0A2N9EBR8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10 PE=4 SV=1)
HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 397/614 (64.66%), Postives = 480/614 (78.18%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
MKREIA+LV+DGF+ EA+S+YSQ+HSASLPP+ F FPPL KACAKL S+ +G+MLHTHLI
Sbjct: 4 MKREIAKLVSDGFFKEAISLYSQYHSASLPPNKFTFPPLLKACAKLKSLSEGQMLHTHLI 63
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
KTGF +DVYAAT+LTDMY+K DALKVFDEMP RN AS N +ISGFS NG EA
Sbjct: 64 KTGFSSDVYAATSLTDMYMKLHLLSDALKVFDEMPERNSASFNAVISGFSQNGYCREAFS 123
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+F+ V G+ RPN+ TI +LLSAC SV HGM++HC AIKLG + DVYVAT+++TMYS E
Sbjct: 124 VFKQVGFGTFRPNSATIASLLSACESVRHGMEMHCLAIKLGVETDVYVATSIVTMYSNYE 183
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
E+ A +VF+ NK+VVS+NA+ISGLL N + R VLD+FK+M EC +PNSVT VL
Sbjct: 184 ELVSATRVFEGTPNKSVVSYNAFISGLLQNGVTRTVLDVFKDMRECSFEEPNSVTFILVL 243
Query: 241 SACSNLSHLGFGRQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNL 300
S C++L +L FGRQ+H L +K + + D + TALVDMYSKCG WQ A + E G NL
Sbjct: 244 SVCASLLYLRFGRQVHGLIMKNEIEFDATLATALVDMYSKCGCWQLAFDACKEFDGIRNL 303
Query: 301 ITWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHR 360
ITWNS+IAGMMLN QSE A+ELFE LE L PDSATWNSMISG +Q G+ IEA KYF R
Sbjct: 304 ITWNSMIAGMMLNSQSENAIELFEQLECEGLVPDSATWNSMISGFSQLGKGIEAIKYFKR 363
Query: 361 MQSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGR 420
M SAGIVPSL S+TSLL CS+LSAL+ GKEIH AIR+ I D FLATALIDMYMKCG
Sbjct: 364 MVSAGIVPSLKSITSLLPACSDLSALQCGKEIHGHAIRTDISTDEFLATALIDMYMKCGH 423
Query: 421 LSSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLL 480
A+++FDQFD KP D FWNAMISGYGRNGEN+SAF +FD+M EE QPN ATF S+L
Sbjct: 424 QFLAQRVFDQFDRKPDDPAFWNAMISGYGRNGENESAFKIFDQMREENAQPNAATFISVL 483
Query: 481 CICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSM 540
+C H GQV+KGWQ FRMM++ Y L+P +H CM+D+LGR+G+LG+A+EL++ELP+PS
Sbjct: 484 SVCGHTGQVNKGWQVFRMMSRDYGLKPKPEHIGCMVDLLGRSGRLGEAKELMQELPQPSA 543
Query: 541 SSLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMM 600
S +ASLLGAC H D +LGEE A+++SELEP+NP PFVILSNIYAE RW DVER+RE+M
Sbjct: 544 SVVASLLGACKCHLDSELGEEMAMKLSELEPENPAPFVILSNIYAEFGRWGDVERIREIM 603
Query: 601 NDKGLRKLSGISSI 614
N+KGLRKL G S I
Sbjct: 604 NNKGLRKLPGFSII 617
BLAST of Lcy13g002610 vs. ExPASy TrEMBL
Match:
A0A314YQJ5 (Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14577 PE=4 SV=1)
HSP 1 Score: 791.6 bits (2043), Expect = 2.4e-225
Identity = 388/612 (63.40%), Postives = 479/612 (78.27%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
MKREIARLVADG Y +AL +Y+Q HSASL PH F FPPL KAC KL S PQ ++LHTHL+
Sbjct: 1 MKREIARLVADGLYRDALCLYAQLHSASLRPHKFTFPPLLKACGKLQSAPQAQILHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
KTGF ADVY+ATALTD+Y+K +DA+KVF+EMP RNLASLN +I+GF NG EALR
Sbjct: 61 KTGFSADVYSATALTDVYMKLHLIDDAVKVFEEMPERNLASLNAVITGFLQNGYCREALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
LF V G RPN++TI ++LSAC +V HGM++HC A+KLG + DVYVAT++LTMYS C
Sbjct: 121 LFANVGPGGFRPNSVTIASMLSACGNVEHGMEMHCLAVKLGVESDVYVATSVLTMYSNCG 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
+ AAKVF++M KN+VS+NA+ISGLL N +P +VLDIFK M C PNSVTL SVL
Sbjct: 181 GLFSAAKVFEEMPIKNIVSYNAFISGLLQNGVPHVVLDIFKKMRACTGEDPNSVTLLSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNL 300
SAC++L +LGFG+Q+H L +KI+ + D ++GTALVDMYSKCG WQ A+ F E NL
Sbjct: 241 SACASLLYLGFGKQVHGLMMKIEVELDTMLGTALVDMYSKCGCWQLAYGTFKELNENRNL 300
Query: 301 ITWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHR 360
TWN++I+GMMLN Q+E A+ELFE LES +PDS TWNSMISG +Q G+ IEAF YF R
Sbjct: 301 FTWNAMISGMMLNAQNENAVELFEQLESEGFKPDSVTWNSMISGFSQLGKAIEAFVYFRR 360
Query: 361 MQSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGR 420
MQSAG+VPSL S+TSLL C++LSAL+ GKE+H AIR+ I D+F++TALIDMYMKCG+
Sbjct: 361 MQSAGVVPSLKSITSLLPACADLSALQCGKEVHGLAIRTSISNDLFISTALIDMYMKCGQ 420
Query: 421 LSSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLL 480
S AR++FD F KP D FWNA+ISGYGRNG+N+SAF +FD+MLE KVQPN ATFTSLL
Sbjct: 421 SSWARRIFDWFQIKPNDPAFWNAIISGYGRNGDNESAFGIFDQMLEAKVQPNAATFTSLL 480
Query: 481 CICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSM 540
+CSH G VDKGWQ FRMMN+ + L+P+ H+ CMID+LGR G+L +AR L++EL EPS
Sbjct: 481 SMCSHTGLVDKGWQVFRMMNRDFGLKPNPAHFGCMIDLLGRTGRLDEARGLIQELSEPSG 540
Query: 541 SSLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMM 600
+ ASLLGAC H D +LG+E A+R+SELEP+NP PFVILS IYA L RW+D E++R +M
Sbjct: 541 AVFASLLGACESHLDSQLGKEMAIRLSELEPENPTPFVILSKIYAALGRWEDAEKIRGLM 600
Query: 601 NDKGLRKLSGIS 612
NDK LRKL G S
Sbjct: 601 NDKTLRKLPGFS 612
BLAST of Lcy13g002610 vs. NCBI nr
Match:
XP_023537719.1 (pentatricopeptide repeat-containing protein At2g02750 [Cucurbita pepo subsp. pepo] >XP_023537727.1 pentatricopeptide repeat-containing protein At2g02750 [Cucurbita pepo subsp. pepo] >XP_023537736.1 pentatricopeptide repeat-containing protein At2g02750 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1077.0 bits (2784), Expect = 0.0e+00
Identity = 528/614 (85.99%), Postives = 565/614 (92.02%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL HNFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSHNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGFS+NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFSLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNR SL+PN+ITIVNLLSACASVAHG+QIHCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRDSLKPNSITIVNLLSACASVAHGIQIHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MPRMV+D+FK+MMECP GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPRMVIDVFKSMMECPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AH +FNER GT+NL
Sbjct: 241 SACSTLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHKVFNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A G+P++AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHAHLGQPVKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTSLLS+CS+LSALRHGKEIHAQ +S IHMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSLLSICSDLSALRHGKEIHAQVTKSFIHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQFF+MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFFKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPFVILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFVILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. NCBI nr
Match:
KAG7032196.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 526/614 (85.67%), Postives = 567/614 (92.35%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL +NFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSYNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MPRMV+D+FK+MMECP GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPRMVIDVFKSMMECPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AH +FNER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHKVFNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A+ G+P++AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHARLGQPVKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTSLLS+CS+LSALRHGKEIHAQ +S IHMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSLLSICSDLSALRHGKEIHAQVTKSFIHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQFF+MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFFKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLH+D KLGEE A RISELEPKNPLPFVILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHRDSKLGEEMASRISELEPKNPLPFVILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. NCBI nr
Match:
KAG6601415.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1073.2 bits (2774), Expect = 9.4e-310
Identity = 526/614 (85.67%), Postives = 566/614 (92.18%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL +NFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSYNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MPRMV+D+FK+MMECP GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPRMVIDVFKSMMECPPGKSNSVTLFSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ A +FNER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCARKVFNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A+ G+P++AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHARLGQPVKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTSLLS+CS+LSALRHGKEIHAQ +S IHMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSLLSICSDLSALRHGKEIHAQVTKSFIHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQFF+MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFFKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPFVILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFVILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. NCBI nr
Match:
XP_022998231.1 (pentatricopeptide repeat-containing protein At2g02750 [Cucurbita maxima])
HSP 1 Score: 1069.3 bits (2764), Expect = 1.2e-308
Identity = 525/614 (85.50%), Postives = 562/614 (91.53%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL HNFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSHNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MPRMV+D+FK+MME P GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPRMVIDVFKSMMERPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AHN+ NER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHNVLNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A G+P +AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHAHLGQPAKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTS LS+CS+LSALRHGKEIHAQ + IHMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSFLSICSDLSALRHGKEIHAQVTKRFIHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQFF+MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFFKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPFVILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFVILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. NCBI nr
Match:
XP_022956404.1 (pentatricopeptide repeat-containing protein At2g02750 [Cucurbita moschata])
HSP 1 Score: 1067.0 bits (2758), Expect = 6.1e-308
Identity = 522/614 (85.02%), Postives = 563/614 (91.69%), Query Frame = 0
Query: 1 MKREIARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLI 60
M REI RLVA GFY+EA SMYSQHHSASL +NFIFPPLFKACAKLNSVPQG+MLHTHL+
Sbjct: 1 MNREIVRLVAKGFYVEAFSMYSQHHSASLSSYNFIFPPLFKACAKLNSVPQGQMLHTHLM 60
Query: 61 KTGFLADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALR 120
K GF ADVYAATALTDMY+K H +DALKVFDEMPHRN ASLN MISGF +NG RGEALR
Sbjct: 61 KVGFSADVYAATALTDMYLKLFHVDDALKVFDEMPHRNTASLNAMISGFLLNGFRGEALR 120
Query: 121 LFELVNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCE 180
+ ELVNRGSL+PN+ITIVNLLSACASVAHGMQ+HCWAI LGFQMDVYVATALLTMY TCE
Sbjct: 121 MVELVNRGSLKPNSITIVNLLSACASVAHGMQVHCWAINLGFQMDVYVATALLTMYCTCE 180
Query: 181 EVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVL 240
++G AAKVFQ+MSNKNVVSFNAYISGLLLN MP MV+D+FK+MMECP GK NSVTL SVL
Sbjct: 181 KMGFAAKVFQEMSNKNVVSFNAYISGLLLNGMPPMVIDVFKSMMECPPGKSNSVTLVSVL 240
Query: 241 SACSNLSHLGFGRQIHALTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLI 300
SACS+LSHLGFGRQ+HALT+KID+DDV+VGTALVDMYSKCGAWQ AH +FNER GT+NL
Sbjct: 241 SACSSLSHLGFGRQVHALTVKIDNDDVMVGTALVDMYSKCGAWQCAHKVFNERKGTSNLF 300
Query: 301 TWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRM 360
TWNSLIAGMMLN+QSEIA+ELFESLESHKLQPDSATWNSMISG A+ G+P++AFKYFHRM
Sbjct: 301 TWNSLIAGMMLNEQSEIAVELFESLESHKLQPDSATWNSMISGHARLGQPVKAFKYFHRM 360
Query: 361 QSAGIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRL 420
QSAG VPSL SLTSLL +CS+LSALRHGKEIHAQ +S HMDV LATALIDMYMKCG L
Sbjct: 361 QSAGTVPSLKSLTSLLFVCSDLSALRHGKEIHAQVTKSFTHMDVLLATALIDMYMKCGCL 420
Query: 421 SSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLC 480
SSA++LFDQF FKPKDTIFWNAMISGYG NGENKSAFD+FDRMLEE V PN ATFTSLL
Sbjct: 421 SSAQRLFDQFGFKPKDTIFWNAMISGYGNNGENKSAFDIFDRMLEEGVHPNAATFTSLLS 480
Query: 481 ICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMS 540
ICSHCGQVDKGWQF +MMNKKYDLQPDRDHY+CMIDILGRAGQLGKAR+LLEELPEPSMS
Sbjct: 481 ICSHCGQVDKGWQFLKMMNKKYDLQPDRDHYNCMIDILGRAGQLGKARKLLEELPEPSMS 540
Query: 541 SLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMN 600
SLASLLGACSLHKD KLGEE A RISELEPKNPLPF+ILSNIYAEL RWKDVERVREMMN
Sbjct: 541 SLASLLGACSLHKDSKLGEEMASRISELEPKNPLPFIILSNIYAELGRWKDVERVREMMN 600
Query: 601 DKGLRKLSGISSIE 615
DKGLRK SG+SSIE
Sbjct: 601 DKGLRKPSGLSSIE 614
BLAST of Lcy13g002610 vs. TAIR 10
Match:
AT2G02750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 633.3 bits (1632), Expect = 2.1e-181
Identity = 303/608 (49.84%), Postives = 435/608 (71.55%), Query Frame = 0
Query: 5 IARLVADGFYIEALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGF 64
++ LV G ++ + +S P+ F FPPL K+CAKL V QG++LH ++KTGF
Sbjct: 11 VSNLVTGGTSLDVILSHS--------PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF 70
Query: 65 LADVYAATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFEL 124
DV+ ATAL MY+K DALKV DEMP R +AS+N +SG NG +A R+F
Sbjct: 71 FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD 130
Query: 125 VNRGSLRPNTITIVNLLSACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGC 184
N++T+ ++L C + GMQ+HC A+K GF+M+VYV T+L++MYS C E
Sbjct: 131 ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 190
Query: 185 AAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACS 244
AA++F+ + +K+VV++NA+ISGL+ N + +V +F M + +PN VT + ++AC+
Sbjct: 191 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 250
Query: 245 NLSHLGFGRQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWN 304
+L +L +GRQ+H L +K + + +VGTAL+DMYSKC W+ A+ +F E T NLI+WN
Sbjct: 251 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 310
Query: 305 SLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSA 364
S+I+GMM+N Q E A+ELFE L+S L+PDSATWNS+ISG +Q G+ IEAFK+F RM S
Sbjct: 311 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 370
Query: 365 GIVPSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSA 424
+VPSL LTSLLS CS++ L++GKEIH I++ D+F+ T+LIDMYMKCG S A
Sbjct: 371 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 430
Query: 425 RKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICS 484
R++FD+F+ KPKD +FWN MISGYG++GE +SA ++F+ + EEKV+P++ATFT++L CS
Sbjct: 431 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 490
Query: 485 HCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELPEPSMSSLA 544
HCG V+KG Q FR+M ++Y +P +H CMID+LGR+G+L +A+E+++++ EPS S +
Sbjct: 491 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS 550
Query: 545 SLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKG 604
SLLG+C H DP LGEE A++++ELEP+NP PFVILS+IYA LERW+DVE +R++++ K
Sbjct: 551 SLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQ 610
Query: 605 LRKLSGIS 612
L KL G+S
Sbjct: 611 LVKLPGLS 610
BLAST of Lcy13g002610 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 376.7 bits (966), Expect = 3.5e-104
Identity = 214/604 (35.43%), Postives = 338/604 (55.96%), Query Frame = 0
Query: 16 EALSMYSQHHSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYAATALT 75
+AL + + + P + F L K C + GK +H L+K+GF D++A T L
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 76 DMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSLRPNTI 135
+MY K +A KVFD MP R+L S NT+++G+S NG AL + + + +L+P+ I
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 136 TIVNLL---SACASVAHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAKVFQDM 195
TIV++L SA ++ G +IH +A++ GF V ++TAL+ MY+ C + A ++F M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 196 SNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLSHLGFG 255
+NVVS+N+ I + N+ P+ + IF+ M++ KP V++ L AC++L L G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERG 357
Query: 256 RQIHALTIKIDSD-DVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLIAGMML 315
R IH L++++ D +V V +L+ MY KC
Sbjct: 358 RFIHKLSVELGLDRNVSVVNSLISMYCKC------------------------------- 417
Query: 316 NDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSAGIVPSLNS 375
+ + A +F L+S L +WN+MI G AQ+GRPI+A YF +M+S + P +
Sbjct: 418 -KEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 477
Query: 376 LTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKLFDQFD 435
S+++ + LS H K IH +RS + +VF+ TAL+DMY KCG + AR +FD
Sbjct: 478 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 537
Query: 436 FKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCGQVDKG 495
+ T WNAMI GYG +G K+A ++F+ M + ++PN TF S++ CSH G V+ G
Sbjct: 538 ERHVTT--WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 597
Query: 496 WQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELP-EPSMSSLASLLGACS 555
+ F MM + Y ++ DHY M+D+LGRAG+L +A + + ++P +P+++ ++LGAC
Sbjct: 598 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 657
Query: 556 LHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLRKLSGI 615
+HK+ E+ A R+ EL P + V+L+NIY W+ V +VR M +GLRK G
Sbjct: 658 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 682
BLAST of Lcy13g002610 vs. TAIR 10
Match:
AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 370.9 bits (951), Expect = 1.9e-102
Identity = 213/591 (36.04%), Postives = 324/591 (54.82%), Query Frame = 0
Query: 31 PHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYAATALTDMYVKFLHFEDALKV 90
P +F FP + KA L G+M+HT ++K+G++ DV A++L MY KF FE++L+V
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 91 FDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSLRPNTITIVNLLSACAS---V 150
FDEMP R++AS NT+IS F +G +AL LF + PN++++ +SAC+ +
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 151 AHGMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAKVFQDMSNKNVVSFNAYISGL 210
G +IH +K GF++D YV +AL+ MY C+ + A +VFQ M K++V++N+ I G
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 211 LLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLSHLGFGRQIHALTIK-IDSDD 270
+ + ++I N M +P+ TL S+L ACS +L G+ IH I+ + + D
Sbjct: 285 VAKGDSKSCVEIL-NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 344
Query: 271 VIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLIAGMMLNDQSEIAMELFESLE 330
+ V +L+D+Y KCG A +F+
Sbjct: 345 IYVNCSLIDLYFKCGEANLAETVFS----------------------------------- 404
Query: 331 SHKLQPDSA-TWNSMISGLAQSGRPIEAFKYFHRMQSAGIVPSLNSLTSLLSLCSNLSAL 390
K Q D A +WN MIS G +A + + +M S G+ P + + TS+L CS L+AL
Sbjct: 405 --KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 464
Query: 391 RHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKLFDQFDFKPKDTIFWNAMIS 450
GK+IH S + D L +AL+DMY KCG A ++F+ KD + W MIS
Sbjct: 465 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN--SIPKKDVVSWTVMIS 524
Query: 451 GYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCGQVDKGWQFFRMMNKKYDLQ 510
YG +G+ + A FD M + ++P+ T ++L C H G +D+G +FF M KY ++
Sbjct: 525 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 584
Query: 511 PDRDHYSCMIDILGRAGQLGKARELLEELPEPSMSS--LASLLGACSLHKDPKLGEETAL 570
P +HYSCMIDILGRAG+L +A E++++ PE S ++ L++L AC LH + LG+ A
Sbjct: 585 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 644
Query: 571 RISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLRKLSGISSIE 615
+ E P + +++L N+YA E W RVR M + GLRK G S IE
Sbjct: 645 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
BLAST of Lcy13g002610 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 360.5 bits (924), Expect = 2.6e-99
Identity = 222/621 (35.75%), Postives = 340/621 (54.75%), Query Frame = 0
Query: 18 LSMYSQHHSASLPPH-NFIFP-------------PLFKACAKLNSVPQGKMLHTHLIKTG 77
++++S SLP H NF P L + C L Q K H H+I+TG
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLR---QLKQTHGHMIRTG 60
Query: 78 FLADVYAATALTDMYV--KFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRL 137
+D Y+A+ L M F E A KVFDE+P N + NT+I ++ ++
Sbjct: 61 TFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWA 120
Query: 138 F-ELVNRGSLRPNTITIVNLLSACASVAH---GMQIHCWAIKLGFQMDVYVATALLTMYS 197
F ++V+ PN T L+ A A V+ G +H A+K DV+VA +L+ Y
Sbjct: 121 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 180
Query: 198 TCEEVGCAAKVFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLA 257
+C ++ A KVF + K+VVS+N+ I+G + P L++FK ME K + VT+
Sbjct: 181 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK-MESEDVKASHVTMV 240
Query: 258 SVLSACSNLSHLGFGRQIHA-LTIKIDSDDVIVGTALVDMYSKCGAWQWAHNLFNERIGT 317
VLSAC+ + +L FGRQ+ + + + ++ + A++DMY+KCG+ + A LF+
Sbjct: 241 GVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 300
Query: 318 NNLITWNSLIAGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKY 377
+N +TW +++ G +++ E A E+ S+ Q D WN++IS Q+G+P EA
Sbjct: 301 DN-VTWTTMLDGYAISEDYEAAREVLNSMP----QKDIVAWNALISAYEQNGKPNEALIV 360
Query: 378 FHRMQSAGIVPSLNSLT--SLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMY 437
FH +Q + LN +T S LS C+ + AL G+ IH+ + I M+ + +ALI MY
Sbjct: 361 FHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 420
Query: 438 MKCGRLSSARKLFDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVAT 497
KCG L +R++F+ + +D W+AMI G +G A D+F +M E V+PN T
Sbjct: 421 SKCGDLEKSREVFNSVE--KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 480
Query: 498 FTSLLCICSHCGQVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEEL 557
FT++ C CSH G VD+ F M Y + P+ HY+C++D+LGR+G L KA + +E +
Sbjct: 481 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 540
Query: 558 P-EPSMSSLASLLGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVE 615
P PS S +LLGAC +H + L E R+ ELEP+N V+LSNIYA+L +W++V
Sbjct: 541 PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS 600
BLAST of Lcy13g002610 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 358.2 bits (918), Expect = 1.3e-98
Identity = 208/609 (34.15%), Postives = 337/609 (55.34%), Query Frame = 0
Query: 12 GFYIEALSMYSQH-HSASLPPHNFIFPPLFKACAKLNSVPQGKMLHTHLIKTGFLADVYA 71
G++ EA+ +Y + + P + FP + + C + + +GK +H H+++ G+ D+
Sbjct: 174 GYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDV 233
Query: 72 ATALTDMYVKFLHFEDALKVFDEMPHRNLASLNTMISGFSMNGSRGEALRLFELVNRGSL 131
AL MYVK + A +FD MP R++ S N MISG+ NG E L LF + S+
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 132 RPNTITIVNLLSACASVAH---GMQIHCWAIKLGFQMDVYVATALLTMYSTCEEVGCAAK 191
P+ +T+ +++SAC + G IH + I GF +D+ V +L MY A K
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 192 VFQDMSNKNVVSFNAYISGLLLNDMPRMVLDIFKNMMECPCGKPNSVTLASVLSACSNLS 251
+F M K++VS+ ISG N +P +D ++ MM+ KP+ +T+A+VLSAC+ L
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLG 413
Query: 252 HLGFGRQIHALTIKID-SDDVIVGTALVDMYSKCGAWQWAHNLFNERIGTNNLITWNSLI 311
L G ++H L IK VIV L++MYSKC A ++F+ I N+I+W S+I
Sbjct: 414 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH-NIPRKNVISWTSII 473
Query: 312 AGMMLNDQSEIAMELFESLESHKLQPDSATWNSMISGLAQSGRPIEAFKYFHRMQSAGIV 371
AG+ LN++ FE+L F R +
Sbjct: 474 AGLRLNNR------CFEAL------------------------------IFLRQMKMTLQ 533
Query: 372 PSLNSLTSLLSLCSNLSALRHGKEIHAQAIRSIIHMDVFLATALIDMYMKCGRLSSARKL 431
P+ +LT+ L+ C+ + AL GKEIHA +R+ + +D FL AL+DMY++CGR+++A
Sbjct: 534 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA--- 593
Query: 432 FDQFDFKPKDTIFWNAMISGYGRNGENKSAFDVFDRMLEEKVQPNVATFTSLLCICSHCG 491
+ QF+ + KD WN +++GY G+ ++FDRM++ +V+P+ TF SLLC CS
Sbjct: 594 WSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ 653
Query: 492 QVDKGWQFFRMMNKKYDLQPDRDHYSCMIDILGRAGQLGKARELLEELP-EPSMSSLASL 551
V +G +F M + Y + P+ HY+C++D+LGRAG+L +A + ++++P P + +L
Sbjct: 654 MVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 713
Query: 552 LGACSLHKDPKLGEETALRISELEPKNPLPFVILSNIYAELERWKDVERVREMMNDKGLR 611
L AC +H LGE +A I EL+ K+ +++L N+YA+ +W++V +VR MM + GL
Sbjct: 714 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 740
Query: 612 KLSGISSIE 615
+G S +E
Sbjct: 774 VDAGCSWVE 740
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q1PFA6 | 2.9e-180 | 49.84 | Pentatricopeptide repeat-containing protein At2g02750 OS=Arabidopsis thaliana OX... | [more] |
| Q3E6Q1 | 5.0e-103 | 35.43 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| O04659 | 2.7e-101 | 36.04 | Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... | [more] |
| O82380 | 3.7e-98 | 35.75 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9M9E2 | 1.8e-97 | 34.15 | Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1K9P7 | 5.9e-309 | 85.50 | pentatricopeptide repeat-containing protein At2g02750 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1GYX9 | 2.9e-308 | 85.02 | pentatricopeptide repeat-containing protein At2g02750 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1DCC8 | 3.7e-303 | 83.55 | pentatricopeptide repeat-containing protein At2g02750 OS=Momordica charantia OX=... | [more] |
| A0A2N9EBR8 | 1.5e-227 | 64.66 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10 PE=4 SV=1 | [more] |
| A0A314YQJ5 | 2.4e-225 | 63.40 | Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_023537719.1 | 0.0e+00 | 85.99 | pentatricopeptide repeat-containing protein At2g02750 [Cucurbita pepo subsp. pep... | [more] |
| KAG7032196.1 | 0.0e+00 | 85.67 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| KAG6601415.1 | 9.4e-310 | 85.67 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| XP_022998231.1 | 1.2e-308 | 85.50 | pentatricopeptide repeat-containing protein At2g02750 [Cucurbita maxima] | [more] |
| XP_022956404.1 | 6.1e-308 | 85.02 | pentatricopeptide repeat-containing protein At2g02750 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G02750.1 | 2.1e-181 | 49.84 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 3.5e-104 | 35.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G27110.1 | 1.9e-102 | 36.04 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G29760.1 | 2.6e-99 | 35.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G15510.1 | 1.3e-98 | 34.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
