Lcy13g002410 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAGGTTAACGTAGATGCAGCTTGGACTTCTTCTCCTCCGTCGACAGGGTTGGGGGCAATTAAAAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCGTTTTCACTTAAAATCGACTATAAAGCCCCCATAGCAGAAGTGATGGCAATTTTCGAACGTGTATCGCTGGCTAGGTCGCTGGGATGTAAGGAAATTATTGTGGAATTTAATTGCTCTCAGACGATTAATCTGGTGGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAGCCTTGGTTGGAGGCCATCTGGGATCAACTTGTTTTTTTCTCCAATGTCAATTTTGTATACATTTCTAGAATGAAAAATGGAGTGGCTGATGGTATAGCTAAGAGGGCTAGAATGCTTAATACATGTGAAACTTGGGTAGAAAATATCCCGAGTTGGTTGAGTTCGATGGTCGATATTGACCGTTCAGATTTTGCCCAAGTGGCGTAATAAAATTTAGTATTTTCCCAAAAAAAAGAAATAAAAAATTTGAATTCACACTTAAAGAAAAAAAAAATCAAAAGAAGATTACAAGCCATTTTTTCAATGAAAACAGAGAGGGGTTTAATTTGGACCTCAAACTTAGTTTTAGCCTTTTTTAGATTTTTTTTTTTTTTTTAGCAAGGAATTACGTAA ATGTGGAAGGTTAACGTAGATGCAGCTTGGACTTCTTCTCCTCCGTCGACAGGGTTGGGGGCAATTAAAAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCGTTTTCACTTAAAATCGACTATAAAGCCCCCATAGCAGAAGTGATGGCAATTTTCGAACGTGTATCGCTGGCTAGGTCGCTGGGATGTAAGGAAATTATTGTGGAATTTAATTGCTCTCAGACGATTAATCTGGTGGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAGCCTTGGTTGGAGGCCATCTGGGATCAACTTCAAGGAATTACGTAA ATGTGGAAGGTTAACGTAGATGCAGCTTGGACTTCTTCTCCTCCGTCGACAGGGTTGGGGGCAATTAAAAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCGTTTTCACTTAAAATCGACTATAAAGCCCCCATAGCAGAAGTGATGGCAATTTTCGAACGTGTATCGCTGGCTAGGTCGCTGGGATGTAAGGAAATTATTGTGGAATTTAATTGCTCTCAGACGATTAATCTGGTGGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAGCCTTGGTTGGAGGCCATCTGGGATCAACTTCAAGGAATTACGTAA MWKVNVDAAWTSSPPSTGLGAIKRDSMGNIAGASAFSLKIDYKAPIAEVMAIFERVSLARSLGCKEIIVEFNCSQTINLVAKKTEVWGEVEPWLEAIWDQLQGIT Homology
BLAST of Lcy13g002410 vs. ExPASy TrEMBL
Match: A2ZKD1 (RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38284 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.7e-04 Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Lcy13g002410 vs. ExPASy TrEMBL
Match: A0A6P5YMX5 (uncharacterized protein LOC111293393 OS=Durio zibethinus OX=66656 GN=LOC111293393 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.7e-04 Identity = 29/90 (32.22%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of Lcy13g002410 vs. ExPASy TrEMBL
Match: A0A6P5Y5S1 (uncharacterized protein LOC111289202 OS=Durio zibethinus OX=66656 GN=LOC111289202 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.7e-04 Identity = 29/90 (32.22%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of Lcy13g002410 vs. ExPASy TrEMBL
Match: A0A2K2CVF0 (RNase H domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g05652v3 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.9e-04 Identity = 25/83 (30.12%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of Lcy13g002410 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida]) HSP 1 Score: 70.5 bits (171), Expect = 9.9e-09 Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of Lcy13g002410 vs. NCBI nr
Match: XP_010686140.1 (PREDICTED: uncharacterized protein LOC104900422 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 59.3 bits (142), Expect = 2.3e-05 Identity = 28/81 (34.57%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of Lcy13g002410 vs. NCBI nr
Match: XP_010682311.1 (PREDICTED: uncharacterized protein LOC104897185 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05 Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Lcy13g002410 vs. NCBI nr
Match: XP_018498111.1 (PREDICTED: uncharacterized protein LOC108865556 [Pyrus x bretschneideri]) HSP 1 Score: 57.4 bits (137), Expect = 8.7e-05 Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Lcy13g002410 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis]) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04 Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|