Lcy13g000850 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g000850
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ABC transporter C family member 3
Location	Chr13: 828642 .. 830403 (-)
RNA-Seq Expression	Lcy13g000850
Synteny	Lcy13g000850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAAACTAGTCGACTCTTTCTTGAATATTCTCTCTTCTCTTCTCTTCTCTTCTTACTTCCATTTTTTTTCCCTTCTTCTTCTGGTTGGAGAAATTAGAATGTAACATAAGGCAAAACATGGCTGTTGGTTCTAATTTCTTGGTGGGTCTTCTCCTGTTTCTATGGTTTAATTAGCTTCTTCAATTGTTTTCCTTTGAGTCTCTCAAATCGCTAATTGCTTGCTGCCTTGTATTATTGCATTTGAATGCTTGTGCTTGCAGGTGAAGAAAAATGGACAAGTGGTGAACTTGCTGCTAGCACAGAGAAGATCACTTAGTGGAGTTAAGTCATTGAAAGAAGACAAGCCCCATCATGAAAGGCCATGCCAAATCTATCAGATAGAAGCTCTTGATGAAGAATCTTCCCCATCACTTGGAAATGGAAGCCTTTGGGTGAGAACTCAAGAAAAAACATAAAGCCCTCGTTTAGCTTACAATAATGTGATGTTTTCTTTTGAATTCTGTGCTGAAAATAATTTGTTCTCAAGTCCTGCAGACTTTATCATATACTTCCAGTTTCTCTTGAATGTGTAATTATATTGCTACAGAGGAGATAAAAGGATTGAGTATTTTCAATTTTCTGTGTAGGGATATTACATTAGTACTGCTAGAGAACTGGCGAGAATGGTTGGAATTCGAAAGGCTCCAATTCTCCATCATTTTTCAGAAACAGTTGTAGGTGCAACCATCATCTGTTGCTTCAATCATTCTCGAGTGGTTTCTCACAACTCAATTTCAATGGAATGGTTGTGTCTACATATCGTCTTAGTGGCTCTTCTTAGATCAGCAATCAATCCAAGTATGCTTTCTAAACTTTATTTGATCAATTGATTCATTGTAACATTCTACTAATTCCATCAAGGAGGAAATAAGTTAGAGAGGGGTTAAAAGTTTTAGAAATAGAGAGAAAAAGAGGTACATCAATTCTTGAGAGAAAAATGTTAAAGAGAAGTGCAAAAATTGAGGGTGATTTAAAAAAAACTAGAGAGAAAATAAGGTAGAGAGACATAAATCTTAGTGAGAAATTTTAGAGTAGGAAAAAGTTAAACAAATTTAGGAGAAATAAATAAAGTCAGGAAGAAAGAGAGGGACAAAAATTAAGAGAATGGAAAACCCTGAGAGAAGGTTGGATTAGTTTGATGATCAGGAGTCAACTCAATAGCATCCTTCATTGGGCCTTTCCTAATCACCAACTTCGTGAATTATCTTTCAGGAAAGGGCGACGATTCAAGCATTCGTGATGGATTCGTTCTTGCATTCTTTTTCTTCTTTGCAAAGATATTGGAGTCTCTCACTCAAAGGCACTGGTATTTCGGCACTCACCGCATCGGTGTACAGGTACGAGCAGCCCTTACAGTGATGATCTATAAGAAGTCTTTGTGTATTAATTCAAATGCTGCTGGTCCAAGTAATGGTAGAATCACAAATCTAGTCAATGTGGATGTTGAAAGAATTGGCGATTTCTCTGAGTATATCCACAAAATTTGGTTGCTTCCTGTTCAAGTAGTTCTAGCACTAGTCATCCTTTATAGGAATCTTGGAGCTGTTCCTTCTATTACTGCTCTTTTAGCCACCATATTGGTAATGGCGAGCAACACGCCTTTGGCTAGTGTTCAAAAGAGTCTACACACAAAGATAATGGATGCAAAAGACTCCCGAATCAAATTGACATCGGAGACTCTAAAGAACATGAGAGTCTTGAAACTGTATTCTTGGGAGTAG

mRNA sequence

GAATAAACTAGTCGACTCTTTCTTGAATATTCTCTCTTCTCTTCTCTTCTCTTCTTACTTCCATTTTTTTTCCCTTCTTCTTCTGGTTGGAGAAATTAGAATGTAACATAAGGCAAAACATGGCTGTTGGTTCTAATTTCTTGGTGAAGAAAAATGGACAAGTGGTGAACTTGCTGCTAGCACAGAGAAGATCACTTAGTGGAGTTAAGTCATTGAAAGAAGACAAGCCCCATCATGAAAGGCCATGCCAAATCTATCAGATAGAAGCTCTTGATGAAGAATCTTCCCCATCACTTGGAAATGGAAGCCTTTGGGGATATTACATTAGTACTGCTAGAGAACTGGCGAGAATGGTTGGAATTCGAAAGGCTCCAATTCTCCATCATTTTTCAGAAACAGTTGTAGGTGCAACCATCATCTGTTGCTTCAATCATTCTCGAGTGGTTTCTCACAACTCAATTTCAATGGAATGGTTGTGTCTACATATCGTCTTAGTGGCTCTTCTTAGATCAGCAATCAATCCAAGAAAGGGCGACGATTCAAGCATTCGTGATGGATTCGTTCTTGCATTCTTTTTCTTCTTTGCAAAGATATTGGAGTCTCTCACTCAAAGGCACTGGTATTTCGGCACTCACCGCATCGGTGTACAGGTACGAGCAGCCCTTACAGTGATGATCTATAAGAAGTCTTTGTGTATTAATTCAAATGCTGCTGGTCCAAGTAATGGTAGAATCACAAATCTAGTCAATGTGGATGTTGAAAGAATTGGCGATTTCTCTGAGTATATCCACAAAATTTGGTTGCTTCCTGTTCAAGTAGTTCTAGCACTAGTCATCCTTTATAGGAATCTTGGAGCTGTTCCTTCTATTACTGCTCTTTTAGCCACCATATTGGTAATGGCGAGCAACACGCCTTTGGCTAGTGTTCAAAAGAGTCTACACACAAAGATAATGGATGCAAAAGACTCCCGAATCAAATTGACATCGGAGACTCTAAAGAACATGAGAGTCTTGAAACTGTATTCTTGGGAGTAG

Coding sequence (CDS)

ATGGCTGTTGGTTCTAATTTCTTGGTGAAGAAAAATGGACAAGTGGTGAACTTGCTGCTAGCACAGAGAAGATCACTTAGTGGAGTTAAGTCATTGAAAGAAGACAAGCCCCATCATGAAAGGCCATGCCAAATCTATCAGATAGAAGCTCTTGATGAAGAATCTTCCCCATCACTTGGAAATGGAAGCCTTTGGGGATATTACATTAGTACTGCTAGAGAACTGGCGAGAATGGTTGGAATTCGAAAGGCTCCAATTCTCCATCATTTTTCAGAAACAGTTGTAGGTGCAACCATCATCTGTTGCTTCAATCATTCTCGAGTGGTTTCTCACAACTCAATTTCAATGGAATGGTTGTGTCTACATATCGTCTTAGTGGCTCTTCTTAGATCAGCAATCAATCCAAGAAAGGGCGACGATTCAAGCATTCGTGATGGATTCGTTCTTGCATTCTTTTTCTTCTTTGCAAAGATATTGGAGTCTCTCACTCAAAGGCACTGGTATTTCGGCACTCACCGCATCGGTGTACAGGTACGAGCAGCCCTTACAGTGATGATCTATAAGAAGTCTTTGTGTATTAATTCAAATGCTGCTGGTCCAAGTAATGGTAGAATCACAAATCTAGTCAATGTGGATGTTGAAAGAATTGGCGATTTCTCTGAGTATATCCACAAAATTTGGTTGCTTCCTGTTCAAGTAGTTCTAGCACTAGTCATCCTTTATAGGAATCTTGGAGCTGTTCCTTCTATTACTGCTCTTTTAGCCACCATATTGGTAATGGCGAGCAACACGCCTTTGGCTAGTGTTCAAAAGAGTCTACACACAAAGATAATGGATGCAAAAGACTCCCGAATCAAATTGACATCGGAGACTCTAAAGAACATGAGAGTCTTGAAACTGTATTCTTGGGAGTAG

Protein sequence

MAVGSNFLVKKNGQVVNLLLAQRRSLSGVKSLKEDKPHHERPCQIYQIEALDEESSPSLGNGSLWGYYISTARELARMVGIRKAPILHHFSETVVGATIICCFNHSRVVSHNSISMEWLCLHIVLVALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE

Homology

[Close]

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot
Match: Q9LK64 (ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 127 ALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMI 186
           AL+ + +    G      +G+VL   FF AKI+E L+QRHW+F   ++G+++R+AL  MI
Sbjct: 344 ALIDTFVQYLNGRRQYNHEGYVLVITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMI 403

Query: 187 YKKSLCIN-SNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLG 246
           Y+K L ++  +  G ++G I N + VD ERIG+FS Y+H  W++ +QV LAL ILYRNLG
Sbjct: 404 YEKGLTLSCQSKQGRTSGEIINFMTVDAERIGNFSWYMHDPWMVLLQVGLALWILYRNLG 463

Query: 247 AVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            + SI AL+ATI+VM  N P   +Q+    K+M+AKDSR+K TSE L+NMR+LKL  WE
Sbjct: 464 -LASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDSRMKSTSEILRNMRILKLQGWE 521

[Close]

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot
Match: A2XCD4 (ABC transporter C family member 13 OS=Oryza sativa subsp. indica OX=39946 GN=ABCC13 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 75/161 (46.58%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 145 DGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCI-NSNAAGPSNG 204
           +G++LA  FF AK+LE+LT R WY G   +G+ V++ LT M+Y+K L + NS+    ++G
Sbjct: 345 EGYILASVFFVAKLLETLTARQWYLGVDVMGIHVKSGLTAMVYRKGLRLSNSSRQSHTSG 404

Query: 205 RITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASN 264
            I N + VDV+R+GD++ Y H IW+LP+Q++LAL ILY+N+G +  ++ L+AT+L +A++
Sbjct: 405 EIVNYMAVDVQRVGDYAWYFHDIWMLPLQIILALAILYKNVG-IAMVSTLVATVLSIAAS 464

Query: 265 TPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            P+A +Q+    K+M +KD R++ TSE LKNMR+LKL +WE
Sbjct: 465 VPVAKLQEHYQDKLMASKDERMRKTSECLKNMRILKLQAWE 504

[Close]

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot
Match: Q10RX7 (ABC transporter C family member 13 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCC13 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 75/161 (46.58%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 145 DGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCI-NSNAAGPSNG 204
           +G++LA  FF AK+LE+LT R WY G   +G+ V++ LT M+Y+K L + NS+    ++G
Sbjct: 345 EGYILASVFFVAKLLETLTARQWYLGVDVMGIHVKSGLTAMVYRKGLRLSNSSRQSHTSG 404

Query: 205 RITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASN 264
            I N + VDV+R+GD++ Y H IW+LP+Q++LAL ILY+N+G +  ++ L+AT+L +A++
Sbjct: 405 EIVNYMAVDVQRVGDYAWYFHDIWMLPLQIILALAILYKNVG-IAMVSTLVATVLSIAAS 464

Query: 265 TPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            P+A +Q+    K+M +KD R++ TSE LKNMR+LKL +WE
Sbjct: 465 VPVAKLQEHYQDKLMASKDERMRKTSECLKNMRILKLQAWE 504

[Close]

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot
Match: A7KVC2 (ABC transporter C family MRP4 OS=Zea mays OX=4577 GN=MRP4 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 74/161 (45.96%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 145 DGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCI-NSNAAGPSNG 204
           +G++LA  FF AK+LE+LT R WY G   +G+ V++ LT M+Y+K L + N++    ++G
Sbjct: 351 EGYILASIFFVAKLLETLTARQWYLGVDIMGIHVKSGLTAMVYRKGLRLSNASRQSHTSG 410

Query: 205 RITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASN 264
            I N + VDV+R+GD++ Y H IW+LP+Q++LAL ILY+N+G +  ++ L+AT+L +A++
Sbjct: 411 EIVNYMAVDVQRVGDYAWYFHDIWMLPLQIILALAILYKNVG-IAMVSTLVATVLSIAAS 470

Query: 265 TPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            P+A +Q+    K+M +KD R++ TSE LKNMR+LKL +WE
Sbjct: 471 VPVAKLQEHYQDKLMASKDERMRKTSECLKNMRILKLQAWE 510

[Close]

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot
Match: Q7GB25 (ABC transporter C family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 5.8e-36
Identity = 79/161 (49.07%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 145 DGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSNA-AGPSNG 204
           +G+VLA  FF +K++E++T R WY G   +G+ VR+ALT M+Y+K L ++S A    ++G
Sbjct: 344 EGYVLAGIFFTSKLIETVTTRQWYMGVDILGMHVRSALTAMVYRKGLKLSSIAKQNHTSG 403

Query: 205 RITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASN 264
            I N + VDV+RIGD+S Y+H IW+LP+Q+VLAL ILY+++G + ++  L+ATI+ +   
Sbjct: 404 EIVNYMAVDVQRIGDYSWYLHDIWMLPMQIVLALAILYKSVG-IAAVATLVATIISILVT 463

Query: 265 TPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            PLA VQ+    K+M AKD R++ TSE L+NMRVLKL +WE
Sbjct: 464 IPLAKVQEDYQDKLMTAKDERMRKTSECLRNMRVLKLQAWE 503

[Close]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL
Match: A0A6J1DDJ4 (putative ABC transporter C family member 15 OS=Momordica charantia OX=3673 GN=LOC111019797 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 2.2e-70
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           KGD+SSIRDG +LAF FFFAK LESLTQR WYFGTHR+G+QVRAALTVMIYKKS+ I  N
Sbjct: 317 KGDNSSIRDGLILAFIFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISI--N 376

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVER+GDFS YIHKIWLLPVQ+VLAL+ILYRNLGA PSITALLAT
Sbjct: 377 AAGPSNGKIINLINVDVERVGDFSWYIHKIWLLPVQIVLALIILYRNLGAAPSITALLAT 436

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+ IMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 437 IFIMVSNTPLANVQESLHSNIMDAKDSRIKLTSETLKNMRVLKLHSWE 482

[Close]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL
Match: A0A5D3CUX0 (Putative ABC transporter C family member 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002000 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS RDG +LAFFFFFAK  ESLTQR WYFGTHR G+QVRAALTVMIYKKS+ I  N
Sbjct: 163 KSDDSSNRDGLILAFFFFFAKTTESLTQRQWYFGTHRAGIQVRAALTVMIYKKSISI--N 222

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LALVILYRNLGA PSITALLAT
Sbjct: 223 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALVILYRNLGAAPSITALLAT 282

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 283 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 328

[Close]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL
Match: A0A1S3BF27 (putative ABC transporter C family member 15 OS=Cucumis melo OX=3656 GN=LOC103488915 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS RDG +LAFFFFFAK  ESLTQR WYFGTHR G+QVRAALTVMIYKKS+ I  N
Sbjct: 300 KSDDSSNRDGLILAFFFFFAKTTESLTQRQWYFGTHRAGIQVRAALTVMIYKKSISI--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LALVILYRNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALVILYRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL
Match: A0A6J1H0K9 (putative ABC transporter C family member 15 OS=Cucurbita moschata OX=3662 GN=LOC111458489 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 138/168 (82.14%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           KGD SS RDG +LAFFFFFAK LESLTQR WYFGTHR+G+QVRAALTVMIYKKS+ +  N
Sbjct: 300 KGDKSSNRDGLILAFFFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISV--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LAL+IL+RNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALIILFRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDA+DSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDARDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL
Match: A0A0A0KS22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590160 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69
Identity = 140/168 (83.33%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS RDG +LAFFFFFAK +ESL QR WYFGTHR G+QVRAALTVMIYKKS+ I  N
Sbjct: 300 KSDDSSNRDGLILAFFFFFAKTMESLAQRQWYFGTHRAGIQVRAALTVMIYKKSISI--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LALVILYRNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALVILYRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. NCBI nr
Match: XP_022151948.1 (putative ABC transporter C family member 15 [Momordica charantia])

HSP 1 Score: 275.8 bits (704), Expect = 4.5e-70
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           KGD+SSIRDG +LAF FFFAK LESLTQR WYFGTHR+G+QVRAALTVMIYKKS+ I  N
Sbjct: 317 KGDNSSIRDGLILAFIFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISI--N 376

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVER+GDFS YIHKIWLLPVQ+VLAL+ILYRNLGA PSITALLAT
Sbjct: 377 AAGPSNGKIINLINVDVERVGDFSWYIHKIWLLPVQIVLALIILYRNLGAAPSITALLAT 436

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+ IMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 437 IFIMVSNTPLANVQESLHSNIMDAKDSRIKLTSETLKNMRVLKLHSWE 482

[Close]

BLAST of Lcy13g000850 vs. NCBI nr
Match: XP_038892249.1 (putative ABC transporter C family member 15 [Benincasa hispida])

HSP 1 Score: 275.4 bits (703), Expect = 5.9e-70
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS R+GF+L+FFFFFAK LESLTQR WYFGTHR+G+QVRAALTVMIYKKS+ I  N
Sbjct: 300 KSDDSSNREGFILSFFFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISI--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LAL+ILYRNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALIILYRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. NCBI nr
Match: KAA0034219.1 (putative ABC transporter C family member 15 [Cucumis melo var. makuwa] >TYK15701.1 putative ABC transporter C family member 15 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 3.8e-69
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS RDG +LAFFFFFAK  ESLTQR WYFGTHR G+QVRAALTVMIYKKS+ I  N
Sbjct: 163 KSDDSSNRDGLILAFFFFFAKTTESLTQRQWYFGTHRAGIQVRAALTVMIYKKSISI--N 222

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LALVILYRNLGA PSITALLAT
Sbjct: 223 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALVILYRNLGAAPSITALLAT 282

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 283 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 328

[Close]

BLAST of Lcy13g000850 vs. NCBI nr
Match: XP_008446087.1 (PREDICTED: putative ABC transporter C family member 15 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 3.8e-69
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           K DDSS RDG +LAFFFFFAK  ESLTQR WYFGTHR G+QVRAALTVMIYKKS+ I  N
Sbjct: 300 KSDDSSNRDGLILAFFFFFAKTTESLTQRQWYFGTHRAGIQVRAALTVMIYKKSISI--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LALVILYRNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALVILYRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDAKDSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. NCBI nr
Match: XP_022956964.1 (putative ABC transporter C family member 15 [Cucurbita moschata])

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-69
Identity = 138/168 (82.14%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 137 KGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSN 196
           KGD SS RDG +LAFFFFFAK LESLTQR WYFGTHR+G+QVRAALTVMIYKKS+ +  N
Sbjct: 300 KGDKSSNRDGLILAFFFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISV--N 359

Query: 197 AAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLAT 256
           AAGPSNG+I NL+NVDVERIGDFS YIHKIWLLPVQ+ LAL+IL+RNLGA PSITALLAT
Sbjct: 360 AAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALIILFRNLGAAPSITALLAT 419

Query: 257 ILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
           I +M SNTPLA+VQ+SLH+KIMDA+DSRIKLTSETLKNMRVLKL+SWE
Sbjct: 420 IFIMVSNTPLANVQESLHSKIMDARDSRIKLTSETLKNMRVLKLHSWE 465

[Close]

BLAST of Lcy13g000850 vs. TAIR 10
Match: AT3G13080.2 (multidrug resistance-associated protein 3 )

HSP 1 Score: 158.3 bits (399), Expect = 9.8e-39
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 127 ALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMI 186
           AL+ + +    G      +G+VL   FF AKI+E L+QRHW+F   ++G+++R+AL  MI
Sbjct: 344 ALIDTFVQYLNGRRQYNHEGYVLVITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMI 403

Query: 187 YKKSLCIN-SNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLG 246
           Y+K L ++  +  G ++G I N + VD ERIG+FS Y+H  W++ +QV LAL ILYRNLG
Sbjct: 404 YEKGLTLSCQSKQGRTSGEIINFMTVDAERIGNFSWYMHDPWMVLLQVGLALWILYRNLG 463

Query: 247 AVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            + SI AL+ATI+VM  N P   +Q+    K+M+AKDSR+K TSE L+NMR+LKL  WE
Sbjct: 464 -LASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDSRMKSTSEILRNMRILKLQGWE 521

[Close]

BLAST of Lcy13g000850 vs. TAIR 10
Match: AT3G13080.1 (multidrug resistance-associated protein 3 )

HSP 1 Score: 158.3 bits (399), Expect = 9.8e-39
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 127 ALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMI 186
           AL+ + +    G      +G+VL   FF AKI+E L+QRHW+F   ++G+++R+AL  MI
Sbjct: 344 ALIDTFVQYLNGRRQYNHEGYVLVITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMI 403

Query: 187 YKKSLCIN-SNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLG 246
           Y+K L ++  +  G ++G I N + VD ERIG+FS Y+H  W++ +QV LAL ILYRNLG
Sbjct: 404 YEKGLTLSCQSKQGRTSGEIINFMTVDAERIGNFSWYMHDPWMVLLQVGLALWILYRNLG 463

Query: 247 AVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            + SI AL+ATI+VM  N P   +Q+    K+M+AKDSR+K TSE L+NMR+LKL  WE
Sbjct: 464 -LASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDSRMKSTSEILRNMRILKLQGWE 521

[Close]

BLAST of Lcy13g000850 vs. TAIR 10
Match: AT3G13080.3 (multidrug resistance-associated protein 3 )

HSP 1 Score: 158.3 bits (399), Expect = 9.8e-39
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 127 ALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMI 186
           AL+ + +    G      +G+VL   FF AKI+E L+QRHW+F   ++G+++R+AL  MI
Sbjct: 344 ALIDTFVQYLNGRRQYNHEGYVLVITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMI 403

Query: 187 YKKSLCIN-SNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLG 246
           Y+K L ++  +  G ++G I N + VD ERIG+FS Y+H  W++ +QV LAL ILYRNLG
Sbjct: 404 YEKGLTLSCQSKQGRTSGEIINFMTVDAERIGNFSWYMHDPWMVLLQVGLALWILYRNLG 463

Query: 247 AVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            + SI AL+ATI+VM  N P   +Q+    K+M+AKDSR+K TSE L+NMR+LKL  WE
Sbjct: 464 -LASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDSRMKSTSEILRNMRILKLQGWE 521

[Close]

BLAST of Lcy13g000850 vs. TAIR 10
Match: AT3G13080.4 (multidrug resistance-associated protein 3 )

HSP 1 Score: 158.3 bits (399), Expect = 9.8e-39
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 127 ALLRSAINPRKGDDSSIRDGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMI 186
           AL+ + +    G      +G+VL   FF AKI+E L+QRHW+F   ++G+++R+AL  MI
Sbjct: 344 ALIDTFVQYLNGRRQYNHEGYVLVITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMI 403

Query: 187 YKKSLCIN-SNAAGPSNGRITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLG 246
           Y+K L ++  +  G ++G I N + VD ERIG+FS Y+H  W++ +QV LAL ILYRNLG
Sbjct: 404 YEKGLTLSCQSKQGRTSGEIINFMTVDAERIGNFSWYMHDPWMVLLQVGLALWILYRNLG 463

Query: 247 AVPSITALLATILVMASNTPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            + SI AL+ATI+VM  N P   +Q+    K+M+AKDSR+K TSE L+NMR+LKL  WE
Sbjct: 464 -LASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDSRMKSTSEILRNMRILKLQGWE 521

[Close]

BLAST of Lcy13g000850 vs. TAIR 10
Match: AT1G04120.1 (multidrug resistance-associated protein 5 )

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-37
Identity = 79/161 (49.07%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 145 DGFVLAFFFFFAKILESLTQRHWYFGTHRIGVQVRAALTVMIYKKSLCINSNA-AGPSNG 204
           +G+VLA  FF +K++E++T R WY G   +G+ VR+ALT M+Y+K L ++S A    ++G
Sbjct: 344 EGYVLAGIFFTSKLIETVTTRQWYMGVDILGMHVRSALTAMVYRKGLKLSSIAKQNHTSG 403

Query: 205 RITNLVNVDVERIGDFSEYIHKIWLLPVQVVLALVILYRNLGAVPSITALLATILVMASN 264
            I N + VDV+RIGD+S Y+H IW+LP+Q+VLAL ILY+++G + ++  L+ATI+ +   
Sbjct: 404 EIVNYMAVDVQRIGDYSWYLHDIWMLPMQIVLALAILYKSVG-IAAVATLVATIISILVT 463

Query: 265 TPLASVQKSLHTKIMDAKDSRIKLTSETLKNMRVLKLYSWE 305
            PLA VQ+    K+M AKD R++ TSE L+NMRVLKL +WE
Sbjct: 464 IPLAKVQEDYQDKLMTAKDERMRKTSECLRNMRVLKLQAWE 503

The following BLAST results are available for this feature:

BLAST of Lcy13g000850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK64	1.4e-37	48.04	ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 ...	[more]
A2XCD4	1.5e-36	46.58	ABC transporter C family member 13 OS=Oryza sativa subsp. indica OX=39946 GN=ABC...	[more]
Q10RX7	1.5e-36	46.58	ABC transporter C family member 13 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
A7KVC2	2.6e-36	45.96	ABC transporter C family MRP4 OS=Zea mays OX=4577 GN=MRP4 PE=2 SV=1	[more]
Q7GB25	5.8e-36	49.07	ABC transporter C family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCC5 PE=2 ...	[more]

BLAST of Lcy13g000850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDJ4	2.2e-70	83.33	putative ABC transporter C family member 15 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5D3CUX0	1.8e-69	83.93	Putative ABC transporter C family member 15 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BF27	1.8e-69	83.93	putative ABC transporter C family member 15 OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A6J1H0K9	2.4e-69	82.14	putative ABC transporter C family member 15 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0KS22	3.2e-69	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590160 PE=4 SV=1	[more]

BLAST of Lcy13g000850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151948.1	4.5e-70	83.33	putative ABC transporter C family member 15 [Momordica charantia]	[more]
XP_038892249.1	5.9e-70	83.33	putative ABC transporter C family member 15 [Benincasa hispida]	[more]
KAA0034219.1	3.8e-69	83.93	putative ABC transporter C family member 15 [Cucumis melo var. makuwa] >TYK15701...	[more]
XP_008446087.1	3.8e-69	83.93	PREDICTED: putative ABC transporter C family member 15 [Cucumis melo]	[more]
XP_022956964.1	5.0e-69	82.14	putative ABC transporter C family member 15 [Cucurbita moschata]	[more]

BLAST of Lcy13g000850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13080.2	9.8e-39	48.04	multidrug resistance-associated protein 3	[more]
AT3G13080.1	9.8e-39	48.04	multidrug resistance-associated protein 3	[more]
AT3G13080.3	9.8e-39	48.04	multidrug resistance-associated protein 3	[more]
AT3G13080.4	9.8e-39	48.04	multidrug resistance-associated protein 3	[more]
AT1G04120.1	4.1e-37	49.07	multidrug resistance-associated protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011527	ABC transporter type 1, transmembrane domain	PFAM	PF00664	ABC_membrane	coord: 143..304 e-value: 3.5E-16 score: 59.7
IPR011527	ABC transporter type 1, transmembrane domain	PROSITE	PS50929	ABC_TM1F	coord: 149..304 score: 18.200201
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 111..304 e-value: 5.6E-22 score: 80.4
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	90123	ABC transporter transmembrane region	coord: 124..304
None	No IPR available	PANTHER	PTHR24223:SF222	OS01G0902100 PROTEIN	coord: 65..127
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 136..304
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 65..127
None	No IPR available	PANTHER	PTHR24223:SF222	OS01G0902100 PROTEIN	coord: 136..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g000850.1	Lcy13g000850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding