Lcy13g000820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g000820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr13: 802359 .. 805195 (-)
RNA-Seq Expression	Lcy13g000820
Synteny	Lcy13g000820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGTGGTTCATCCTTCTCGGAGTCGGAGCGCCGTATTCTCTGAAACCTACTCTTCTCGCTCGCCGTCGCCGACAACTCGCTTCGAAGACTCGAAGTTATTTTTCTGGATTGCAAATCCCAGTTTCTGAATTGGAATTCGAGATTTTGATATTCATTCATTCTGTAAAAAGAGGTGAAACTCGTATCTCAAGAATTCATTTGCTTCCTTACCGATCGACGAAAAGCTCGCACTTCTCCTCACTGGTACTATTATTTCTTTCTCTGTGAATTCGTAATCACATTTCTATCGCTTCCATTTGGCGAACGATTGCAGAAGAAGGAAGATAGCTGCATTACATTCCTTGAAAGTGGACTACGACCTCCACAGGTGCGCGGATTTTATTGTATCGAGTGTGTCTATTGCTGATTTTCAACCCTAGAGCTTTTCTGTTGGACTGTGAGAGTTTTCCTGAATTCGATAGTTCGAAATTTCTCTATTCAGTCAGTCAATAAGAAACGAAACTTTTCTATTATGAAGTTTTCTGTGTTACATTAGTTGCGCAAGAATAAACCCAAATTTGTTTGATTGTTTCTTTGTTTTCCCTTTTGGGGGCACTTGGGTGAAGTCTATTTTGGCTTTTCTTCAGCTGGTGTGCTTCATGTCATTGCATATTCAGAAGAATCTTAAGAGCATTTGCTGCGTTCTTGATCGTTGTAAACCATTTGCCTGTCTTCATGTATCCTCTCAAAGCTGCTCCCATGCCCTTTACTCTGCAAATTTTTCGTCTCCGCTAGAACCTTCCATATTTGTAAGAGCTACAGATTTGCAGCAAAGAATACCTTCTGAATGTCGGACAAAACTTTCTGATATTGATTTGATCATTTCTAAAGTTCGGGTGGGTAGCAGCGAGGATGAAGTTTTTCAGTCACTCTTGCACGATCAAGCGTGTAACAGCATACAGTTCTCCCATGAAGTTGTTTACAAACTGCTCCATCGTTTCAAAGACGATTGGAAGTCTGCTTTGGGTGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACATTATAATAGATACATTGGGCAAAACAAAGCAAATGGTCAAGATGACAGGCATGCTAGAAGAAATGAAGGAAGCTCGCCTTGTGACGCTTAATACTGTAGCTAAGGCCATGCGAAGGCTTGCTGGTGCTGGACAATGGGAAGATTCTGTAAGGATATTTGATGATTTGGGAACTTTTGGGTTGGAGAAGAACACTGAATCAATGAATGTTTTGCTTGATACTCTGTGCAAAGAGAAGAAGGTCGAGCAAGCTCGACAGATATATTTGGATCTCAAATCACATATTTCCCCAAATGCCAACACGTTCAATATTTTTATTCATGGTTGGTGTAAAGTTGATAGGGTTGATGAGGCACATTGGACGTTACAAGAGATGAAAGGACATGGTTATGGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCATTACAACTTCAGTAAGGTTTATGAGATGCTTGATGAAATGGATGCTCAAGGATGCCCAGCAAATGTCATCACTTACACCACCATCATGTGCTCGCTAACAAAGTCAGAAGAATTTGAGGAAGCTCTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACACTTTCTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGTACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGGGTGTTTTACCAAATACATCGACCTACAATTCGATGATTTCTATGTACTGTCATCGTGCGCAAGAACAAAAGGCTATGAAACTGCTTGAGGATATGGAGAATTCAGGGGTTTGTAAGCCTGATGTCCAGACATATTACCCATTGCTTAAATCCTGCTTTAGAACTGGAAAGACAGATTATGTTTTGAGCAAGTTATTGGATGACATGATGAATAAACATCATCTGAGTCTTGATATATCAACCTATTCCCTTCTAATACATGGCCTTTGTAGAGCAAATAAGTGTGAGTGGGCTTACCAGCTATTTGAGAAGATGATTGGTCAAGATATAAAGCCAAGATACCTTACATGTCAACTGCTTTTGGATGAAGTTAAGGAGAAGAACATGGATGAAGTTGCTGGTAGGATTGAAGATATCATGAAGAAACTTTGAGCTTCTGAGTAACAAATCTGTCAGGGTGTGAAGAACATGGATGAAGTTGCTGGTAGGATTGAAGATATCATGAAGAAACTTGGAGCTTCTGAGTAACAAATCTGTCAGGGTGTGAAAAAGCATGTCTGCTATTCTGGATATGCATACACGATAGACATAGGAGACGAAGTTGATCGTACGCGATTCTGTTATCGAGTGTCGTCTTAATTTTAATTTGATTGCTTGAGATGCCTCCATTTTTCCCACTTCATTCGAATCAGAAGCACATGTCATATAGATCGTCGTGCGATTGGCTGTTGATGAAGGTCGCGAGCACACCGATTGTTCGATAACAAGGTTGCGAGCTCTCATGTCTTTTAACCTCTAAAGATGAACTGGTCTATGCAGTTTGGTAACTGATATTTCCAGAAGTAAACCGTTGAATTGAGATGTGATGTCAAGAAACAGTCTGCAACAAACAGAATTTTGAAGTACTTTCCTCAAGAAATTCATATATAATCTCAGTGCACAAGTCTCTTCATCCTGAGAAATTTTCAATTAGCCAGTCTATATTTGTAATGTAACATTGTAATCAAGATTTTAAACTAAAGTAGAATTATGCATAAAGCTTTTTTTTTTTTTAAATGAAATTTAAATAT

mRNA sequence

CCGGTGGTTCATCCTTCTCGGAGTCGGAGCGCCGTATTCTCTGAAACCTACTCTTCTCGCTCGCCGTCGCCGACAACTCGCTTCGAAGACTCGAAGTTATTTTTCTGGATTGCAAATCCCAGTTTCTGAATTGGAATTCGAGATTTTGATATTCATTCATTCTGTAAAAAGAGGTGAAACTCGTATCTCAAGAATTCATTTGCTTCCTTACCGATCGACGAAAAGCTCGCACTTCTCCTCACTGGTACTATTATTTCTTTCTCTGTGAATTCGTAATCACATTTCTATCGCTTCCATTTGGCGAACGATTGCAGAAGAAGGAAGATAGCTGCATTACATTCCTTGAAAGTGGACTACGACCTCCACAGCTGGTGTGCTTCATGTCATTGCATATTCAGAAGAATCTTAAGAGCATTTGCTGCGTTCTTGATCGTTGTAAACCATTTGCCTGTCTTCATGTATCCTCTCAAAGCTGCTCCCATGCCCTTTACTCTGCAAATTTTTCGTCTCCGCTAGAACCTTCCATATTTGTAAGAGCTACAGATTTGCAGCAAAGAATACCTTCTGAATGTCGGACAAAACTTTCTGATATTGATTTGATCATTTCTAAAGTTCGGGTGGGTAGCAGCGAGGATGAAGTTTTTCAGTCACTCTTGCACGATCAAGCGTGTAACAGCATACAGTTCTCCCATGAAGTTGTTTACAAACTGCTCCATCGTTTCAAAGACGATTGGAAGTCTGCTTTGGGTGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACATTATAATAGATACATTGGGCAAAACAAAGCAAATGGTCAAGATGACAGGCATGCTAGAAGAAATGAAGGAAGCTCGCCTTGTGACGCTTAATACTGTAGCTAAGGCCATGCGAAGGCTTGCTGGTGCTGGACAATGGGAAGATTCTGTAAGGATATTTGATGATTTGGGAACTTTTGGGTTGGAGAAGAACACTGAATCAATGAATGTTTTGCTTGATACTCTGTGCAAAGAGAAGAAGGTCGAGCAAGCTCGACAGATATATTTGGATCTCAAATCACATATTTCCCCAAATGCCAACACGTTCAATATTTTTATTCATGGTTGGTGTAAAGTTGATAGGGTTGATGAGGCACATTGGACGTTACAAGAGATGAAAGGACATGGTTATGGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCATTACAACTTCAGTAAGGTTTATGAGATGCTTGATGAAATGGATGCTCAAGGATGCCCAGCAAATGTCATCACTTACACCACCATCATGTGCTCGCTAACAAAGTCAGAAGAATTTGAGGAAGCTCTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACACTTTCTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGTACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGGGTGTTTTACCAAATACATCGACCTACAATTCGATGATTTCTATGTACTGTCATCGTGCGCAAGAACAAAAGGCTATGAAACTGCTTGAGGATATGGAGAATTCAGGGGTTTGTAAGCCTGATGTCCAGACATATTACCCATTGCTTAAATCCTGCTTTAGAACTGGAAAGACAGATTATGTTTTGAGCAAGTTATTGGATGACATGATGAATAAACATCATCTGAGTCTTGATATATCAACCTATTCCCTTCTAATACATGGCCTTTGTAGAGCAAATAAGTGTGAGTGGGCTTACCAGCTATTTGAGAAGATGATTGGTCAAGATATAAAGCCAAGATACCTTACATGTCAACTGCTTTTGGATGAAGTTAAGGAGAAGAACATGGATGAAGTTGCTGGTAGGATTGAAGATATCATGAAGAAACTTTGAGCTTCTGAGTAACAAATCTGTCAGGGTGTGAAGAACATGGATGAAGTTGCTGGTAGGATTGAAGATATCATGAAGAAACTTGGAGCTTCTGAGTAACAAATCTGTCAGGGTGTGAAAAAGCATGTCTGCTATTCTGGATATGCATACACGATAGACATAGGAGACGAAGTTGATCGTACGCGATTCTGTTATCGAGTGTCGTCTTAATTTTAATTTGATTGCTTGAGATGCCTCCATTTTTCCCACTTCATTCGAATCAGAAGCACATGTCATATAGATCGTCGTGCGATTGGCTGTTGATGAAGGTCGCGAGCACACCGATTGTTCGATAACAAGGTTGCGAGCTCTCATGTCTTTTAACCTCTAAAGATGAACTGGTCTATGCAGTTTGGTAACTGATATTTCCAGAAGTAAACCGTTGAATTGAGATGTGATGTCAAGAAACAGTCTGCAACAAACAGAATTTTGAAGTACTTTCCTCAAGAAATTCATATATAATCTCAGTGCACAAGTCTCTTCATCCTGAGAAATTTTCAATTAGCCAGTCTATATTTGTAATGTAACATTGTAATCAAGATTTTAAACTAAAGTAGAATTATGCATAAAGCTTTTTTTTTTTTTAAATGAAATTTAAATAT

Coding sequence (CDS)

ATGTCATTGCATATTCAGAAGAATCTTAAGAGCATTTGCTGCGTTCTTGATCGTTGTAAACCATTTGCCTGTCTTCATGTATCCTCTCAAAGCTGCTCCCATGCCCTTTACTCTGCAAATTTTTCGTCTCCGCTAGAACCTTCCATATTTGTAAGAGCTACAGATTTGCAGCAAAGAATACCTTCTGAATGTCGGACAAAACTTTCTGATATTGATTTGATCATTTCTAAAGTTCGGGTGGGTAGCAGCGAGGATGAAGTTTTTCAGTCACTCTTGCACGATCAAGCGTGTAACAGCATACAGTTCTCCCATGAAGTTGTTTACAAACTGCTCCATCGTTTCAAAGACGATTGGAAGTCTGCTTTGGGTGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACATTATAATAGATACATTGGGCAAAACAAAGCAAATGGTCAAGATGACAGGCATGCTAGAAGAAATGAAGGAAGCTCGCCTTGTGACGCTTAATACTGTAGCTAAGGCCATGCGAAGGCTTGCTGGTGCTGGACAATGGGAAGATTCTGTAAGGATATTTGATGATTTGGGAACTTTTGGGTTGGAGAAGAACACTGAATCAATGAATGTTTTGCTTGATACTCTGTGCAAAGAGAAGAAGGTCGAGCAAGCTCGACAGATATATTTGGATCTCAAATCACATATTTCCCCAAATGCCAACACGTTCAATATTTTTATTCATGGTTGGTGTAAAGTTGATAGGGTTGATGAGGCACATTGGACGTTACAAGAGATGAAAGGACATGGTTATGGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCATTACAACTTCAGTAAGGTTTATGAGATGCTTGATGAAATGGATGCTCAAGGATGCCCAGCAAATGTCATCACTTACACCACCATCATGTGCTCGCTAACAAAGTCAGAAGAATTTGAGGAAGCTCTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACACTTTCTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGTACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGGGTGTTTTACCAAATACATCGACCTACAATTCGATGATTTCTATGTACTGTCATCGTGCGCAAGAACAAAAGGCTATGAAACTGCTTGAGGATATGGAGAATTCAGGGGTTTGTAAGCCTGATGTCCAGACATATTACCCATTGCTTAAATCCTGCTTTAGAACTGGAAAGACAGATTATGTTTTGAGCAAGTTATTGGATGACATGATGAATAAACATCATCTGAGTCTTGATATATCAACCTATTCCCTTCTAATACATGGCCTTTGTAGAGCAAATAAGTGTGAGTGGGCTTACCAGCTATTTGAGAAGATGATTGGTCAAGATATAAAGCCAAGATACCTTACATGTCAACTGCTTTTGGATGAAGTTAAGGAGAAGAACATGGATGAAGTTGCTGGTAGGATTGAAGATATCATGAAGAAACTTTGA

Protein sequence

MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRIPSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL

Homology

[Close]

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot
Match: Q9M8W9 (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 589.0 bits (1517), Expect = 5.4e-167
Identity = 283/446 (63.45%), Postives = 346/446 (77.58%), Query Frame = 0


Query: 72  DLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESL 131
           ++I+ +     SED+VF+ L  D+ C  +  S  +V+KLLHRF+DDW+SALG+ +WAES 
Sbjct: 55  NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114

Query: 132 SGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDS 191
            G KH+ D YD+ +D LGK K+  +M   +E M+  +LVTLNTVAK MRR AGAG+WE++
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174

Query: 192 VRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANTFNIFIHGW 251
           V IFD LG FGLEKNTESMN+LLDTLCKEK+VEQAR + L LKSHI+PNA+TFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234

Query: 252 CKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANV 311
           CK +RV+EA WT+QEMKGHG+ PCVISY+TII  YC+ + F KVYEML EM+A G P N 
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294

Query: 312 ITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEV 371
           ITYTTIM SL   +EFEEAL++A RMK +GC+PD+L YNCLIHTL RAG++ EA  VF V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354

Query: 372 EMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRT 431
           EMP  GV  NTSTYNSMI+MYCH  +E KA++LL++ME+S +C PDV TY PLL+SCF+ 
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414

Query: 432 GKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPRYL 491
           G    V  KLL +M+ KHHLSLD STY+ LI  LCRAN CEWAY LFE+MI QDI PR+ 
Sbjct: 415 GDVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 474

Query: 492 TCQLLLDEVKEKNMDEVAGRIEDIMK 518
           TC LLL+EVK+KNM E A RIE IMK
Sbjct: 475 TCLLLLEEVKKKNMHESAERIEHIMK 499

[Close]

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.9e-85
Identity = 170/456 (37.28%), Postives = 282/456 (61.84%), Query Frame = 0


Query: 68  LSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRW 127
           + DID +   +   + +D   + ++ + +   +  +  +V ++L RF + W  A G F W
Sbjct: 99  VEDIDKVCDFL---NKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIW 158

Query: 128 AESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEM---KEARLVTLNTVAKAMRRLAG 187
           A S +G+ H+   Y+ ++D LGK +    M  ++ EM   +E++LVTL+T++K MRRLA 
Sbjct: 159 ANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAK 218

Query: 188 AGQWEDSVRIFDDL-GTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANT 247
           +G++  +V  F ++  ++G++ +T +MN L+D L KE  +E A +++L L   I P+A T
Sbjct: 219 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDART 278

Query: 248 FNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMD 307
           FNI IHG+CK  + D+A   +  MK   + P V++Y++ +  YC+  +F +V EML+EM 
Sbjct: 279 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 338

Query: 308 AQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVR 367
             GC  NV+TYT +M SL KS++  EAL + E+MK  GC PD   Y+ LIH L + G+ +
Sbjct: 339 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFK 398

Query: 368 EAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMEN--SGVCKPDVQTY 427
           +A  +FE +M ++GV  +   YN+MIS   H ++++ A++LL+ ME+     C P+V+TY
Sbjct: 399 DAAEIFE-DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 458

Query: 428 YPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKM 487
            PLLK C    K   +L  LL  M+ K+ +S+D+STY LLI GLC + K E A   FE+ 
Sbjct: 459 APLLKMCCHKKKMK-LLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEA 518

Query: 488 IGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMK 518
           + + + PR  TC++L+DE+++KNM E   +I+ +++
Sbjct: 519 VRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQ 548

[Close]

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.2e-46
Identity = 107/388 (27.58%), Postives = 199/388 (51.29%), Query Frame = 0


Query: 100 IQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTG 159
           +  SH+++ ++L RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M  
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVS 216

Query: 160 MLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCK 219
           +LEEM    L+T+ T   AM+  A A + + +V IF+ +  +  +   E++N LLD+L +
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 276

Query: 220 EKKVEQARQIYLDLKSHISPNANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISY 279
            K  ++A+ ++  LK   +PN  T+ + ++GWC+V  + EA     +M  HG  P ++++
Sbjct: 277 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 336

Query: 280 STIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKS 339
           + ++    R    S   ++   M ++G   NV +YT ++    K    E A++  + M  
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396

Query: 340 AGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQ 399
           +G +PD   Y CLI   G   K+ + ++    EM  KG  P+  TYN++I +  ++   +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 456

Query: 400 KAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYS 459
              ++   M  + + +P + T+  ++KS F     +Y + + + D M K  +  D ++Y+
Sbjct: 457 HGTRIYNKMIQNEI-EPSIHTFNMIMKSYFVA--RNYEMGRAVWDEMIKKGICPDDNSYT 516

Query: 460 LLIHGLCRANKCEWAYQLFEKMIGQDIK 488
           +LI GL    K   A +  E+M+ + +K
Sbjct: 517 VLIRGLISEGKSREACRYLEEMLDKGMK 540

[Close]

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.0e-46
Identity = 133/498 (26.71%), Postives = 250/498 (50.20%), Query Frame = 0


Query: 30  QSCSHALYSANFSSPLEPSIFVRATDLQQRIPSECR--TKLSDIDLIISKVRVGSSEDEV 89
           ++ +  LY +  +S +E    V A D  Q     C+  TK +D     SKV         
Sbjct: 38  KASNFTLYGSFHASSVETQ--VSANDASQDAERICKILTKFTD-----SKV--------- 97

Query: 90  FQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDT 149
            ++LL++    S++ S  ++ ++L +  +    AL VF+WAE+  GFKHT   Y+ +I++
Sbjct: 98  -ETLLNEA---SVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES 157

Query: 150 LGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNT 209
           LGK KQ   +  ++++MK  +L++  T A   RR A A + ++++  F  +  FG +  +
Sbjct: 158 LGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMES 217

Query: 210 ESMNVLLDTLCKEKKVEQARQIYLDL-KSHISPNANTFNIFIHGW---CKVDRVDEAHWT 269
              N +LDTL K + V  A++++  + K    P+  ++ I + GW     + RVDE +  
Sbjct: 218 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN-- 277

Query: 270 LQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTK 329
            +EMK  G+ P V++Y  II  +C+   + +     +EM+ + C  +   + +++  L  
Sbjct: 278 -REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 337

Query: 330 SEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTS 389
            ++  +AL+  ER KS+G   +  +YN L+     + ++ +A    + EM  KGV PN  
Sbjct: 338 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD-EMRLKGVGPNAR 397

Query: 390 TYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLD 449
           TY+ ++       + ++A ++ + M     C+P V TY  +++      + D  + K+ D
Sbjct: 398 TYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAI-KIWD 457

Query: 450 DMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPR----YLTCQLLLDE 509
           +M  K  L   +  +S LI  LC  NK + A + F +M+   I+P         Q LLDE
Sbjct: 458 EMKGKGVLP-GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDE 505

Query: 510 VKEKNMDEVAGRIEDIMK 518
            ++  + ++  +++ + K
Sbjct: 518 GRKDKVTDLVVKMDRLRK 505

[Close]

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.0e-46
Identity = 107/388 (27.58%), Postives = 199/388 (51.29%), Query Frame = 0


Query: 100 IQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTG 159
           +  SH+++ ++L RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M  
Sbjct: 156 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVS 215

Query: 160 MLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCK 219
           +LEEM    L+T+ T   AM+  A A + + +V IF+ +  +  +   E++N LLD+L +
Sbjct: 216 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 275

Query: 220 EKKVEQARQIYLDLKSHISPNANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISY 279
            K  ++A+ ++  LK   +PN  T+ + ++GWC+V  + EA     +M  HG  P ++++
Sbjct: 276 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 335

Query: 280 STIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKS 339
           + ++    R    S   ++   M ++G   NV +YT ++    K    E A++  + M  
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395

Query: 340 AGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQ 399
           +G +PD   Y CLI   G   K+ + ++    EM  KG  P+  TYN++I +  ++   +
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455

Query: 400 KAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYS 459
              ++   M  + + +P + T+  ++KS F     +Y + + + D M K  +  D ++Y+
Sbjct: 456 HGTRIYNKMIQNEI-EPSIHTFNMIMKSYFVA--RNYEMGRAVWDEMIKKGICPDDNSYT 515

Query: 460 LLIHGLCRANKCEWAYQLFEKMIGQDIK 488
           +LI GL    K   A +  E+M+ + +K
Sbjct: 516 VLIRGLISEGKSREACRYLEEMLDKGMK 539

[Close]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL
Match: A0A6J1HQ84 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466381 PE=4 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.6e-270
Identity = 466/519 (89.79%), Postives = 481/519 (92.68%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL  QKNLK IC VLDRCK FA  HVS         SANFSS LEPSIF+R  DLQQ I
Sbjct: 1   MSLRFQKNLKRICGVLDRCKLFAYFHVS---------SANFSSLLEPSIFIRGRDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
            SE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQACN I FSHE VYKLL RFKDDWKS
Sbjct: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIHFSHEFVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEMKEA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN+FIHGWCKVDRVDEAHWTLQEMKGHGY PCVISYSTIILFYCRH  FSKVYE+LD
Sbjct: 241 ANTFNMFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRHCKFSKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMD QGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDTQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KVREAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQKAMKLLE+ME SG+CKPDVQT
Sbjct: 361 KVREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDMMNK HLSLDISTYSLLIHGLCRANKCEWAYQLFEK
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           M+GQDIKPRYLTC+LLLDEVK+KNMDEVA RIEDIMKKL
Sbjct: 481 MVGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL
Match: A0A6J1FZG9 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449323 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.6e-267
Identity = 462/519 (89.02%), Postives = 480/519 (92.49%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL  QKNLKSIC VLDRCK FA  HVS         SANFSSPLEPSI + A DLQQ I
Sbjct: 1   MSLRFQKNLKSICGVLDRCKLFAYFHVS---------SANFSSPLEPSISISARDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
           PSE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQAC  IQFSHE+VYKLL RFKDDWKS
Sbjct: 61  PSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACYHIQFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEM+EA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMREAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN FIHGWCKV+RVDEAHWTLQEMKGHG+ PCVISYSTIILFYCRH  FSKVY +LD
Sbjct: 241 ANTFNTFIHGWCKVNRVDEAHWTLQEMKGHGFRPCVISYSTIILFYCRHCKFSKVYALLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           K REAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQKAMKLL +ME SG+CKPDVQT
Sbjct: 361 KEREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLGEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDM+NK HLSLDISTYSLLIHGLCRANKCEWAYQLFE 
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTC+LLLDEVK+KNMDEVA RIEDIMKKL
Sbjct: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL
Match: A0A6J1DD08 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111019649 PE=3 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 1.6e-254
Identity = 436/519 (84.01%), Postives = 463/519 (89.21%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSLH+QK +KSIC V DR  PFA  H+S +SCSH L SA F                   
Sbjct: 1   MSLHVQKTVKSICGVFDRHIPFAYFHLSFRSCSHTLSSAKF------------------- 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
                   SD+DL+ISKVRVG SEDEVFQSLL DQACNSIQFSHE+VYKLL RFKDDWKS
Sbjct: 61  --------SDVDLVISKVRVGCSEDEVFQSLLQDQACNSIQFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAES SGFKHTP+LYDI+IDTLGKTKQMVKM GMLEEMKEA LVTLNTVAKAMR
Sbjct: 121 ALGVFRWAESRSGFKHTPELYDIVIDTLGKTKQMVKMRGMLEEMKEAHLVTLNTVAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWE +VR FDDLG+FGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLK HISPN
Sbjct: 181 RFAGAGQWEGAVRTFDDLGSFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKLHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFNIFIHGWCKV+RVDEAHWTLQEMKGHGY PCVISYSTIILFYCR +NFSKVY +LD
Sbjct: 241 ANTFNIFIHGWCKVERVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRRFNFSKVYALLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPAN+ITYTTIMCSL+KSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANIITYTTIMCSLSKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KV EAIHVF+VEMPSKGVLPNTSTYNSMISMYCH A+E+KAMKL+++MENSGVCKPDVQT
Sbjct: 361 KVGEAIHVFKVEMPSKGVLPNTSTYNSMISMYCHGAREEKAMKLVKEMENSGVCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKT+Y+LSKLLD+MMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK
Sbjct: 421 YYPLLKSCFRTGKTEYILSKLLDEMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTCQLLLDEVK+KNMDEVA RIE I+KKL
Sbjct: 481 MIGQDIKPRYLTCQLLLDEVKQKNMDEVADRIEGILKKL 492

[Close]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL
Match: A0A1S3BE82 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488914 PE=4 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.7e-254
Identity = 435/519 (83.82%), Postives = 470/519 (90.56%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           M LHIQK+ K I  V  RCK  A  HVSSQSC + L  AN S PLEP+I V A DLQQR+
Sbjct: 1   MLLHIQKSFKGIWGV--RCKSIAYFHVSSQSCFNGLSPANISYPLEPNISVGARDLQQRV 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
           PSE + K+SD+D II+KV+VGSSEDEVFQSLL D  CNSI+FSH++VYKLL RFKDDWKS
Sbjct: 61  PSEFQKKISDVDFIIAKVQVGSSEDEVFQSLLQDPECNSIRFSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGF+HTPDLYDI+IDTLGKTKQ+VKM GMLEEMKEARLVTL+TVAKAMR
Sbjct: 121 ALGVFRWAESLSGFQHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWE++ RIFDDL T+GLEKNTESMNVLLDTLCKEKKVEQARQIYL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAARIFDDLETYGLEKNTESMNVLLDTLCKEKKVEQARQIYLELKSHIAPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN+FIHGWCKV+R+DEAHWTLQEMKG+G+ PCVISYSTIILFYC H  F+KVYE+LD
Sbjct: 241 ANTFNMFIHGWCKVNRIDEAHWTLQEMKGYGHRPCVISYSTIILFYCHHCKFNKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KVREAI VFEVEMPSK VLPNTSTYNSMISMYC RA+E+KA KLLE+ME SG CKPDVQT
Sbjct: 361 KVREAIRVFEVEMPSKSVLPNTSTYNSMISMYCRRAREEKARKLLEEMEKSGYCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFR GKTDY LS LLD+M NKHHLSLDISTYSLLIHGLCRANKC+WAYQLFEK
Sbjct: 421 YYPLLKSCFRNGKTDYDLSNLLDEMTNKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MI QDIKPRYLTCQLLLDEVK+KNMD+VA RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEVKQKNMDKVADRIEGIMKKL 517

[Close]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL
Match: A0A5A7SWG7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002030 PE=4 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.7e-254
Identity = 435/519 (83.82%), Postives = 470/519 (90.56%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           M LHIQK+ K I  V  RCK  A  HVSSQSC + L  AN S PLEP+I V A DLQQR+
Sbjct: 1   MLLHIQKSFKGIWGV--RCKSIAYFHVSSQSCFNGLSPANISYPLEPNISVGARDLQQRV 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
           PSE + K+SD+D II+KV+VGSSEDEVFQSLL D  CNSI+FSH++VYKLL RFKDDWKS
Sbjct: 61  PSEFQKKISDVDFIIAKVQVGSSEDEVFQSLLQDPECNSIRFSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGF+HTPDLYDI+IDTLGKTKQ+VKM GMLEEMKEARLVTL+TVAKAMR
Sbjct: 121 ALGVFRWAESLSGFQHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWE++ RIFDDL T+GLEKNTESMNVLLDTLCKEKKVEQARQIYL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAARIFDDLETYGLEKNTESMNVLLDTLCKEKKVEQARQIYLELKSHIAPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN+FIHGWCKV+R+DEAHWTLQEMKG+G+ PCVISYSTIILFYC H  F+KVYE+LD
Sbjct: 241 ANTFNMFIHGWCKVNRIDEAHWTLQEMKGYGHRPCVISYSTIILFYCHHCKFNKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KVREAI VFEVEMPSK VLPNTSTYNSMISMYC RA+E+KA KLLE+ME SG CKPDVQT
Sbjct: 361 KVREAIRVFEVEMPSKSVLPNTSTYNSMISMYCRRAREEKARKLLEEMEKSGYCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFR GKTDY LS LLD+M NKHHLSLDISTYSLLIHGLCRANKC+WAYQLFEK
Sbjct: 421 YYPLLKSCFRNGKTDYDLSNLLDEMTNKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MI QDIKPRYLTCQLLLDEVK+KNMD+VA RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEVKQKNMDKVADRIEGIMKKL 517

[Close]

BLAST of Lcy13g000820 vs. NCBI nr
Match: XP_022966771.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 941.4 bits (2432), Expect = 3.3e-270
Identity = 466/519 (89.79%), Postives = 481/519 (92.68%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL  QKNLK IC VLDRCK FA  HVS         SANFSS LEPSIF+R  DLQQ I
Sbjct: 1   MSLRFQKNLKRICGVLDRCKLFAYFHVS---------SANFSSLLEPSIFIRGRDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
            SE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQACN I FSHE VYKLL RFKDDWKS
Sbjct: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIHFSHEFVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEMKEA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN+FIHGWCKVDRVDEAHWTLQEMKGHGY PCVISYSTIILFYCRH  FSKVYE+LD
Sbjct: 241 ANTFNMFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRHCKFSKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMD QGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDTQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KVREAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQKAMKLLE+ME SG+CKPDVQT
Sbjct: 361 KVREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDMMNK HLSLDISTYSLLIHGLCRANKCEWAYQLFEK
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           M+GQDIKPRYLTC+LLLDEVK+KNMDEVA RIEDIMKKL
Sbjct: 481 MVGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. NCBI nr
Match: KAG7012750.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 935.6 bits (2417), Expect = 1.8e-268
Identity = 465/519 (89.60%), Postives = 481/519 (92.68%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL +QKNLKSIC VLDRCK FA  HVS         SANFSS LEPSIF+RA DLQQ I
Sbjct: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVS---------SANFSSLLEPSIFIRARDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
            SE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQACN IQFSHE+VYKLL RFKDDWKS
Sbjct: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEMKEA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN FIHGWCKVDRVDEAHWTLQEMKGHGY PCVISYSTIILFYCR   FSKVYE+LD
Sbjct: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRRCKFSKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           K REAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQ AMKLLE+ME SG+CKPDVQT
Sbjct: 361 KEREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQNAMKLLEEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDM+NK HLSLDISTYSLLIHGLCRANKCEWAYQLFE 
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTC+LLLDEVK+KNMDEV  RIEDIMKKL
Sbjct: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. NCBI nr
Match: KAG6573665.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 934.5 bits (2414), Expect = 4.0e-268
Identity = 464/519 (89.40%), Postives = 481/519 (92.68%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL +QKNLKSIC VLDRCK FA  HVS         SANFSS LEPSIF+RA DLQQ I
Sbjct: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVS---------SANFSSLLEPSIFIRARDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
            SE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQACN IQFSHE+VYKLL RFKDDWKS
Sbjct: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEM+EA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMREAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN FIHGWCKVDRVDEAHWTLQEMKGHGY PCVISYSTIILFYCR   FSKVYE+LD
Sbjct: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRRCKFSKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           K REAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQ AMKLLE+ME SG+CKPDVQT
Sbjct: 361 KEREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQNAMKLLEEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDM+NK HLSLDISTYSLLIHGLCRANKCEWAYQLFE 
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTC+LLLDEVK+KNMDEV  RIEDIMKKL
Sbjct: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. NCBI nr
Match: XP_023541614.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 933.7 bits (2412), Expect = 6.8e-268
Identity = 461/519 (88.82%), Postives = 480/519 (92.49%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL  QKNLK IC VLDRCK FA  HVSS+         NFSSPLE SI +RA DLQQ +
Sbjct: 1   MSLRFQKNLKRICGVLDRCKLFAYFHVSSE---------NFSSPLESSISIRARDLQQIV 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
            SEC+TKLSDIDLIISKVRVG SEDEVFQSLLHDQACN I FSHE+VYKLL RFKDDWKS
Sbjct: 61  QSECQTKLSDIDLIISKVRVGRSEDEVFQSLLHDQACNRIHFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEMKEA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN FIHGWCKV+RVDEAHWTLQEMKGHGY PCVISYSTIILFYCR   FSKVYE+LD
Sbjct: 241 ANTFNTFIHGWCKVNRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRRCKFSKVYELLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           KV+EAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQKAMKLLE+ME SG+CKPDVQT
Sbjct: 361 KVQEAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDMMNK HLSLDISTYSLLIHGLCR+NKCEWAYQLFE 
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRSNKCEWAYQLFET 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTC+LLLDEVK+KNMDEVA RIEDIMKKL
Sbjct: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. NCBI nr
Match: XP_022944939.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata] >XP_022944940.1 pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata])

HSP 1 Score: 931.4 bits (2406), Expect = 3.4e-267
Identity = 462/519 (89.02%), Postives = 480/519 (92.49%), Query Frame = 0


Query: 1   MSLHIQKNLKSICCVLDRCKPFACLHVSSQSCSHALYSANFSSPLEPSIFVRATDLQQRI 60
           MSL  QKNLKSIC VLDRCK FA  HVS         SANFSSPLEPSI + A DLQQ I
Sbjct: 1   MSLRFQKNLKSICGVLDRCKLFAYFHVS---------SANFSSPLEPSISISARDLQQII 60

Query: 61  PSECRTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKS 120
           PSE +TKLSDIDLIISKVRVGSSEDEVFQSLLHDQAC  IQFSHE+VYKLL RFKDDWKS
Sbjct: 61  PSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACYHIQFSHELVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD+IIDTLGKTKQMVKM GMLEEM+EA+LVTLNT+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMREAQLVTLNTLAKAMR 180

Query: 181 RLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPN 240
           R AGAGQWED+VRIFDDLGTFGLEKNTESMNVLLDTLCKEK+VEQAR+IYLDLKSHISPN
Sbjct: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240

Query: 241 ANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLD 300
           ANTFN FIHGWCKV+RVDEAHWTLQEMKGHG+ PCVISYSTIILFYCRH  FSKVY +LD
Sbjct: 241 ANTFNTFIHGWCKVNRVDEAHWTLQEMKGHGFRPCVISYSTIILFYCRHCKFSKVYALLD 300

Query: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAG 360
           EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTL YNCLIHTLGRAG
Sbjct: 301 EMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAG 360

Query: 361 KVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQT 420
           K REAIHVFEVEMPSK VLPNTSTYNSMISMYCHRAQEQKAMKLL +ME SG+CKPDVQT
Sbjct: 361 KEREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLGEMEKSGLCKPDVQT 420

Query: 421 YYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEK 480
           YYPLLKSCFRTGKTD VLSKLLDDM+NK HLSLDISTYSLLIHGLCRANKCEWAYQLFE 
Sbjct: 421 YYPLLKSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480

Query: 481 MIGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMKKL 520
           MIGQDIKPRYLTC+LLLDEVK+KNMDEVA RIEDIMKKL
Sbjct: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]

BLAST of Lcy13g000820 vs. TAIR 10
Match: AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 589.0 bits (1517), Expect = 3.8e-168
Identity = 283/446 (63.45%), Postives = 346/446 (77.58%), Query Frame = 0


Query: 72  DLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESL 131
           ++I+ +     SED+VF+ L  D+ C  +  S  +V+KLLHRF+DDW+SALG+ +WAES 
Sbjct: 55  NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114

Query: 132 SGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDS 191
            G KH+ D YD+ +D LGK K+  +M   +E M+  +LVTLNTVAK MRR AGAG+WE++
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174

Query: 192 VRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANTFNIFIHGW 251
           V IFD LG FGLEKNTESMN+LLDTLCKEK+VEQAR + L LKSHI+PNA+TFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234

Query: 252 CKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANV 311
           CK +RV+EA WT+QEMKGHG+ PCVISY+TII  YC+ + F KVYEML EM+A G P N 
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294

Query: 312 ITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEV 371
           ITYTTIM SL   +EFEEAL++A RMK +GC+PD+L YNCLIHTL RAG++ EA  VF V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354

Query: 372 EMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRT 431
           EMP  GV  NTSTYNSMI+MYCH  +E KA++LL++ME+S +C PDV TY PLL+SCF+ 
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414

Query: 432 GKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPRYL 491
           G    V  KLL +M+ KHHLSLD STY+ LI  LCRAN CEWAY LFE+MI QDI PR+ 
Sbjct: 415 GDVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 474

Query: 492 TCQLLLDEVKEKNMDEVAGRIEDIMK 518
           TC LLL+EVK+KNM E A RIE IMK
Sbjct: 475 TCLLLLEEVKKKNMHESAERIEHIMK 499

[Close]

BLAST of Lcy13g000820 vs. TAIR 10
Match: AT3G04130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 589.0 bits (1517), Expect = 3.8e-168
Identity = 283/446 (63.45%), Postives = 346/446 (77.58%), Query Frame = 0


Query: 72  DLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESL 131
           ++I+ +     SED+VF+ L  D+ C  +  S  +V+KLLHRF+DDW+SALG+ +WAES 
Sbjct: 55  NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114

Query: 132 SGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDS 191
            G KH+ D YD+ +D LGK K+  +M   +E M+  +LVTLNTVAK MRR AGAG+WE++
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEA 174

Query: 192 VRIFDDLGTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANTFNIFIHGW 251
           V IFD LG FGLEKNTESMN+LLDTLCKEK+VEQAR + L LKSHI+PNA+TFNIFIHGW
Sbjct: 175 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGW 234

Query: 252 CKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANV 311
           CK +RV+EA WT+QEMKGHG+ PCVISY+TII  YC+ + F KVYEML EM+A G P N 
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294

Query: 312 ITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEV 371
           ITYTTIM SL   +EFEEAL++A RMK +GC+PD+L YNCLIHTL RAG++ EA  VF V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354

Query: 372 EMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRT 431
           EMP  GV  NTSTYNSMI+MYCH  +E KA++LL++ME+S +C PDV TY PLL+SCF+ 
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414

Query: 432 GKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPRYL 491
           G    V  KLL +M+ KHHLSLD STY+ LI  LCRAN CEWAY LFE+MI QDI PR+ 
Sbjct: 415 GDVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 474

Query: 492 TCQLLLDEVKEKNMDEVAGRIEDIMK 518
           TC LLL+EVK+KNM E A RIE IMK
Sbjct: 475 TCLLLLEEVKKKNMHESAERIEHIMK 499

[Close]

BLAST of Lcy13g000820 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 317.0 bits (811), Expect = 2.8e-86
Identity = 170/456 (37.28%), Postives = 282/456 (61.84%), Query Frame = 0


Query: 68  LSDIDLIISKVRVGSSEDEVFQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRW 127
           + DID +   +   + +D   + ++ + +   +  +  +V ++L RF + W  A G F W
Sbjct: 99  VEDIDKVCDFL---NKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIW 158

Query: 128 AESLSGFKHTPDLYDIIIDTLGKTKQMVKMTGMLEEM---KEARLVTLNTVAKAMRRLAG 187
           A S +G+ H+   Y+ ++D LGK +    M  ++ EM   +E++LVTL+T++K MRRLA 
Sbjct: 159 ANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAK 218

Query: 188 AGQWEDSVRIFDDL-GTFGLEKNTESMNVLLDTLCKEKKVEQARQIYLDLKSHISPNANT 247
           +G++  +V  F ++  ++G++ +T +MN L+D L KE  +E A +++L L   I P+A T
Sbjct: 219 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDART 278

Query: 248 FNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMD 307
           FNI IHG+CK  + D+A   +  MK   + P V++Y++ +  YC+  +F +V EML+EM 
Sbjct: 279 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 338

Query: 308 AQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVR 367
             GC  NV+TYT +M SL KS++  EAL + E+MK  GC PD   Y+ LIH L + G+ +
Sbjct: 339 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFK 398

Query: 368 EAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQKAMKLLEDMEN--SGVCKPDVQTY 427
           +A  +FE +M ++GV  +   YN+MIS   H ++++ A++LL+ ME+     C P+V+TY
Sbjct: 399 DAAEIFE-DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 458

Query: 428 YPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKM 487
            PLLK C    K   +L  LL  M+ K+ +S+D+STY LLI GLC + K E A   FE+ 
Sbjct: 459 APLLKMCCHKKKMK-LLGILLHHMV-KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEA 518

Query: 488 IGQDIKPRYLTCQLLLDEVKEKNMDEVAGRIEDIMK 518
           + + + PR  TC++L+DE+++KNM E   +I+ +++
Sbjct: 519 VRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQ 548

[Close]

BLAST of Lcy13g000820 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-47
Identity = 107/388 (27.58%), Postives = 199/388 (51.29%), Query Frame = 0


Query: 100 IQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDTLGKTKQMVKMTG 159
           +  SH+++ ++L RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M  
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVS 216

Query: 160 MLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNTESMNVLLDTLCK 219
           +LEEM    L+T+ T   AM+  A A + + +V IF+ +  +  +   E++N LLD+L +
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR 276

Query: 220 EKKVEQARQIYLDLKSHISPNANTFNIFIHGWCKVDRVDEAHWTLQEMKGHGYGPCVISY 279
            K  ++A+ ++  LK   +PN  T+ + ++GWC+V  + EA     +M  HG  P ++++
Sbjct: 277 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 336

Query: 280 STIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKS 339
           + ++    R    S   ++   M ++G   NV +YT ++    K    E A++  + M  
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396

Query: 340 AGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTSTYNSMISMYCHRAQEQ 399
           +G +PD   Y CLI   G   K+ + ++    EM  KG  P+  TYN++I +  ++   +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKL-DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 456

Query: 400 KAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDDMMNKHHLSLDISTYS 459
              ++   M  + + +P + T+  ++KS F     +Y + + + D M K  +  D ++Y+
Sbjct: 457 HGTRIYNKMIQNEI-EPSIHTFNMIMKSYFVA--RNYEMGRAVWDEMIKKGICPDDNSYT 516

Query: 460 LLIHGLCRANKCEWAYQLFEKMIGQDIK 488
           +LI GL    K   A +  E+M+ + +K
Sbjct: 517 VLIRGLISEGKSREACRYLEEMLDKGMK 540

[Close]

BLAST of Lcy13g000820 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-47
Identity = 133/498 (26.71%), Postives = 250/498 (50.20%), Query Frame = 0


Query: 30  QSCSHALYSANFSSPLEPSIFVRATDLQQRIPSECR--TKLSDIDLIISKVRVGSSEDEV 89
           ++ +  LY +  +S +E    V A D  Q     C+  TK +D     SKV         
Sbjct: 38  KASNFTLYGSFHASSVETQ--VSANDASQDAERICKILTKFTD-----SKV--------- 97

Query: 90  FQSLLHDQACNSIQFSHEVVYKLLHRFKDDWKSALGVFRWAESLSGFKHTPDLYDIIIDT 149
            ++LL++    S++ S  ++ ++L +  +    AL VF+WAE+  GFKHT   Y+ +I++
Sbjct: 98  -ETLLNEA---SVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES 157

Query: 150 LGKTKQMVKMTGMLEEMKEARLVTLNTVAKAMRRLAGAGQWEDSVRIFDDLGTFGLEKNT 209
           LGK KQ   +  ++++MK  +L++  T A   RR A A + ++++  F  +  FG +  +
Sbjct: 158 LGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMES 217

Query: 210 ESMNVLLDTLCKEKKVEQARQIYLDL-KSHISPNANTFNIFIHGW---CKVDRVDEAHWT 269
              N +LDTL K + V  A++++  + K    P+  ++ I + GW     + RVDE +  
Sbjct: 218 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN-- 277

Query: 270 LQEMKGHGYGPCVISYSTIILFYCRHYNFSKVYEMLDEMDAQGCPANVITYTTIMCSLTK 329
            +EMK  G+ P V++Y  II  +C+   + +     +EM+ + C  +   + +++  L  
Sbjct: 278 -REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 337

Query: 330 SEEFEEALQIAERMKSAGCEPDTLSYNCLIHTLGRAGKVREAIHVFEVEMPSKGVLPNTS 389
            ++  +AL+  ER KS+G   +  +YN L+     + ++ +A    + EM  KGV PN  
Sbjct: 338 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD-EMRLKGVGPNAR 397

Query: 390 TYNSMISMYCHRAQEQKAMKLLEDMENSGVCKPDVQTYYPLLKSCFRTGKTDYVLSKLLD 449
           TY+ ++       + ++A ++ + M     C+P V TY  +++      + D  + K+ D
Sbjct: 398 TYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAI-KIWD 457

Query: 450 DMMNKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMIGQDIKPR----YLTCQLLLDE 509
           +M  K  L   +  +S LI  LC  NK + A + F +M+   I+P         Q LLDE
Sbjct: 458 EMKGKGVLP-GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDE 505

Query: 510 VKEKNMDEVAGRIEDIMK 518
            ++  + ++  +++ + K
Sbjct: 518 GRKDKVTDLVVKMDRLRK 505

The following BLAST results are available for this feature:

BLAST of Lcy13g000820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8W9	5.4e-167	63.45	Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop...	[more]
Q9LUJ4	3.9e-85	37.28	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
Q3EAF8	6.2e-46	27.58	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
Q9C9A2	8.0e-46	26.71	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9LEQ7	8.0e-46	27.58	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy13g000820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQ84	1.6e-270	89.79	pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Cuc...	[more]
A0A6J1FZG9	1.6e-267	89.02	pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucurbit...	[more]
A0A6J1DD08	1.6e-254	84.01	pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like OS=Mom...	[more]
A0A1S3BE82	2.7e-254	83.82	pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis ...	[more]
A0A5A7SWG7	2.7e-254	83.82	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy13g000820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966771.1	3.3e-270	89.79	pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur...	[more]
KAG7012750.1	1.8e-268	89.60	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6573665.1	4.0e-268	89.40	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023541614.1	6.8e-268	88.82	pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur...	[more]
XP_022944939.1	3.4e-267	89.02	pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita ...	[more]

BLAST of Lcy13g000820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04130.1	3.8e-168	63.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G04130.2	3.8e-168	63.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22670.1	2.8e-86	37.28	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	4.4e-47	27.58	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	5.7e-47	26.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 73..228 e-value: 8.9E-18 score: 66.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 373..519 e-value: 1.5E-28 score: 102.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 232..303 e-value: 4.8E-14 score: 54.3 coord: 304..372 e-value: 1.8E-18 score: 68.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 344..394 e-value: 7.9E-13 score: 48.4 coord: 205..253 e-value: 2.8E-9 score: 37.0 coord: 274..321 e-value: 4.9E-9 score: 36.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 277..310 e-value: 9.4E-6 score: 23.5 coord: 243..274 e-value: 9.2E-4 score: 17.2 coord: 312..346 e-value: 6.6E-9 score: 33.4 coord: 457..488 e-value: 6.9E-7 score: 27.1 coord: 348..382 e-value: 2.1E-7 score: 28.7 coord: 384..417 e-value: 7.7E-7 score: 26.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 451..481 e-value: 2.3E-9 score: 36.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 141..167 e-value: 1.4 score: 9.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..415 score: 11.465577
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 310..344 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 454..488 score: 12.057487
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 275..309 score: 9.032168
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 345..380 score: 12.101333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 240..274 score: 11.432693
None	No IPR available	PANTHER	PTHR47933:SF8	OS02G0601600 PROTEIN	coord: 24..519
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 24..519
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..32 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g000820.1	Lcy13g000820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding