Lcy13g000440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g000440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Fibrous sheath-interacting protein
Location	Chr13: 384839 .. 386108 (-)
RNA-Seq Expression	Lcy13g000440
Synteny	Lcy13g000440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGTGCTTCTGATTTCGCACACTGCAAGCAATTTACAGAAAGTCAATCAAAGATAGAGAACCAGAAATGGCCGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAACGGAGCCATCGCGACCCGTTCACTTCAGCCGTGCTTCTTCTTCCTTCTCGGTCGGAACTAGACGATCCTTCACTCACAGATTGAATTGCAATGTGAGGAGTACTAGGGCTCGAGGATTTCACTTTCCTGAACGAACTGTTCTGAATTGTTCCTACGACCAGACCCAATCGACTTCGTCGTCTAATCAGGACGGCCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCTATTTCAGGTTTCTACCTGACCCTTATGTTATCAAGGCTTCGGAATTGTAAGCCATAAATCAATTAGTTTCATTCATCGCCTCTTCTTATGGACAAGTCTGTGTAGTTTTTTTGTGTGAGTTTGTTCATGTTTCTATTTCACGATGACTTGTTAATCTACGCGACATAATTGATTGTGAGTTCGTTTGGTTGCTCGGTACAGAGGTGTCTAAGACAGAAGGGAGGGTTGGGCATACCACAAATATGGTAATTGGAGGAACAGTGACAGATGATTCTACAAATGAGTGGATCACTTTGGATCAAAAGGTACGGAATAGTTGCTCCATTAGCTCCAATTTATGTATGGAATGGCTAGTTCATGTCTTTCGATGGTTGGGTTTGTAGGTAAATTGGTATTAGTTTTTAAGTGGTTACCTCTCTCTATCTTTGCTGCAGTCAGAAAGTAGTGGAAGAGTCAGGAGAGATTTGCCCTTGAAAATCACATTATTGGCACTAACTAATAGCTATATGGCATCACCATCAACTTTACTTTTGCTCGATTATTGCACAGGTTAACTCATACCCGGGTGTTAGAGGCTTTACTGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTCGTTGCTGTGGAGTCTGTCCTCCAACAGCCAATACCCGAGGTGATTATTTTCACTTTCTTAGGCCAATTAAAATCACAGTCTATCAGTCACTTTGTTCCGCAGATGCCTCGTTATGTGGTGCCTTATACGTGTGTAGTTTCTAAGGAATTGAAATTCATGTCTGTAGTTAGTGATGAAATTAGGCCAGATAATAATATTTCCTCTTCTGTTTGATTATGTGGGAAACATAGCCTTTCTGATTAATTTCAATTATAAAATGTCATACAGAATGAATTGATGATGAAAATTGGAAAATGTAACCTAAA

mRNA sequence

ATCTGTGCTTCTGATTTCGCACACTGCAAGCAATTTACAGAAAGTCAATCAAAGATAGAGAACCAGAAATGGCCGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAACGGAGCCATCGCGACCCGTTCACTTCAGCCGTGCTTCTTCTTCCTTCTCGGTCGGAACTAGACGATCCTTCACTCACAGATTGAATTGCAATGTGAGGAGTACTAGGGCTCGAGGATTTCACTTTCCTGAACGAACTGTTCTGAATTGTTCCTACGACCAGACCCAATCGACTTCGTCGTCTAATCAGGACGGCCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCTATTTCAGAGGTGTCTAAGACAGAAGGGAGGGTTGGGCATACCACAAATATGGTAATTGGAGGAACAGTGACAGATGATTCTACAAATGAGTGGATCACTTTGGATCAAAAGGTTAACTCATACCCGGGTGTTAGAGGCTTTACTGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTCGTTGCTGTGGAGTCTGTCCTCCAACAGCCAATACCCGAGGTGATTATTTTCACTTTCTTAGGCCAATTAAAATCACAGTCTATCAGTCACTTTGTTCCGCAGATGCCTCGTTATGTGGTGCCTTATACGTGTGTAGTTTCTAAGGAATTGAAATTCATGTCTGTAGTTAGTGATGAAATTAGGCCAGATAATAATATTTCCTCTTCTGTTTGATTATGTGGGAAACATAGCCTTTCTGATTAATTTCAATTATAAAATGTCATACAGAATGAATTGATGATGAAAATTGGAAAATGTAACCTAAA

Coding sequence (CDS)

ATGGCCGCAAGCAGGACTGTGTTGCGTTCTGCATCAATATTCTTAACGGAGCCATCGCGACCCGTTCACTTCAGCCGTGCTTCTTCTTCCTTCTCGGTCGGAACTAGACGATCCTTCACTCACAGATTGAATTGCAATGTGAGGAGTACTAGGGCTCGAGGATTTCACTTTCCTGAACGAACTGTTCTGAATTGTTCCTACGACCAGACCCAATCGACTTCGTCGTCTAATCAGGACGGCCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCTATTTCAGAGGTGTCTAAGACAGAAGGGAGGGTTGGGCATACCACAAATATGGTAATTGGAGGAACAGTGACAGATGATTCTACAAATGAGTGGATCACTTTGGATCAAAAGGTTAACTCATACCCGGGTGTTAGAGGCTTTACTGCAATTGGAACTGGGGGAGATGATTTTGTGCAATCTATGGTCGTTGCTGTGGAGTCTGTCCTCCAACAGCCAATACCCGAGGTGATTATTTTCACTTTCTTAGGCCAATTAAAATCACAGTCTATCAGTCACTTTGTTCCGCAGATGCCTCGTTATGTGGTGCCTTATACGTGTGTAGTTTCTAAGGAATTGAAATTCATGTCTGTAGTTAGTGATGAAATTAGGCCAGATAATAATATTTCCTCTTCTGTTTGA

Protein sequence

MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPERTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTNEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEVIIFTFLGQLKSQSISHFVPQMPRYVVPYTCVVSKELKFMSVVSDEIRPDNNISSSV

Homology

[Close]

BLAST of Lcy13g000440 vs. ExPASy TrEMBL
Match: A0A6J1DC16 (uncharacterized protein LOC111019651 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019651 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.9e-77
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPER 60
           MAASRTVLRSASIFL EP RPVHFSRASSS ++GT RSFTHRLNCNV + RARGFHF +R
Sbjct: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60

Query: 61  TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCS+D+TQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN
Sbjct: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120

Query: 121 EWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           EWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 166

[Close]

BLAST of Lcy13g000440 vs. ExPASy TrEMBL
Match: A0A6J1HTC4 (uncharacterized protein LOC111466408 OS=Cucurbita maxima OX=3661 GN=LOC111466408 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.3e-76
Identity = 152/167 (91.02%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRA-SSSFSVGTRRSFTHRLNCNVRSTRARGFHFPE 60
           MAASR VLRSASIFLTEPSRP HFSRA SSSF++GTRRSF HRLNCNV S+RARGFHFPE
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFPHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RTVLNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTVLNCSLDKTQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           NEWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPE
Sbjct: 121 NEWIILDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPE 167

[Close]

BLAST of Lcy13g000440 vs. ExPASy TrEMBL
Match: A0A6J1FZV2 (uncharacterized protein LOC111449401 OS=Cucurbita moschata OX=3662 GN=LOC111449401 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-75
Identity = 151/167 (90.42%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRA-SSSFSVGTRRSFTHRLNCNVRSTRARGFHFPE 60
           MAASR VLRSASIFLTEPSRP HFSRA SSSF++GTRRSFTHRLNCNV S+RARGFHFPE
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RT LNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           NEWI LDQKVNSYPGVRGFTAIGTGG DFVQSMVVAVESV+QQPIPE
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGHDFVQSMVVAVESVIQQPIPE 167

[Close]

BLAST of Lcy13g000440 vs. ExPASy TrEMBL
Match: A0A6J1KAN5 (uncharacterized protein LOC111493214 OS=Cucurbita maxima OX=3661 GN=LOC111493214 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-72
Identity = 146/166 (87.95%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPER 60
           MAASRTVLRSA+IFLTEPSRPV   RASSSFS+GTRR+FTHRL C   +TRARGF FP+R
Sbjct: 1   MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKR 60

Query: 61  TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVL CSYD+TQSTSSSNQD QGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDS+N
Sbjct: 61  TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSN 120

Query: 121 EWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           EWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQ+PIPE
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPE 166

[Close]

BLAST of Lcy13g000440 vs. ExPASy TrEMBL
Match: A0A6J1GWI1 (uncharacterized protein LOC111458218 OS=Cucurbita moschata OX=3662 GN=LOC111458218 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.5e-72
Identity = 145/166 (87.35%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPER 60
           MAASRTVLRSA+IFLTEPSRPV   RASSSFS+GTRR+FTHRL C   +TR RGF FP+R
Sbjct: 1   MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRVRGFLFPKR 60

Query: 61  TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVL CSYD+TQSTSSSNQD QGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDS+N
Sbjct: 61  TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSN 120

Query: 121 EWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           EWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQ+PIPE
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPE 166

[Close]

BLAST of Lcy13g000440 vs. NCBI nr
Match: XP_023542309.1 (uncharacterized protein LOC111802242 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 5.6e-78
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPER 60
           MAASR VLRSASIFLTEPSRP HFSRASSSFS+GTRRSFTHRLNCNV S+R RGFHFPER
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSFSLGTRRSFTHRLNCNVWSSRVRGFHFPER 60

Query: 61  TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDSTN
Sbjct: 61  TVLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSTN 120

Query: 121 EWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           EWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPE
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPE 166

[Close]

BLAST of Lcy13g000440 vs. NCBI nr
Match: KAG6573590.1 (hypothetical protein SDJN03_27477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.8 bits (769), Expect = 9.6e-78
Identity = 156/173 (90.17%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRA-SSSFSVGTRRSFTHRLNCNVRSTRARGFHFPE 60
           MAASR VLRSASIFLTEPSRP HFSRA SSSF++GTRRSFTH LNCNV S+RARGFHFPE
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHGLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RT LNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEVIIFTF 173
           NEWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPEVIIF+F
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEVIIFSF 173

[Close]

BLAST of Lcy13g000440 vs. NCBI nr
Match: XP_022151740.1 (uncharacterized protein LOC111019651 isoform X1 [Momordica charantia])

HSP 1 Score: 297.7 bits (761), Expect = 8.1e-77
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSFTHRLNCNVRSTRARGFHFPER 60
           MAASRTVLRSASIFL EP RPVHFSRASSS ++GT RSFTHRLNCNV + RARGFHF +R
Sbjct: 1   MAASRTVLRSASIFLMEPYRPVHFSRASSSIALGTSRSFTHRLNCNVTTARARGFHFRKR 60

Query: 61  TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120
           TVLNCS+D+TQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN
Sbjct: 61  TVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDSTN 120

Query: 121 EWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           EWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE
Sbjct: 121 EWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 166

[Close]

BLAST of Lcy13g000440 vs. NCBI nr
Match: XP_022966813.1 (uncharacterized protein LOC111466408 [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 9.0e-76
Identity = 152/167 (91.02%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRA-SSSFSVGTRRSFTHRLNCNVRSTRARGFHFPE 60
           MAASR VLRSASIFLTEPSRP HFSRA SSSF++GTRRSF HRLNCNV S+RARGFHFPE
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFPHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RTVLNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTVLNCSLDKTQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           NEWI LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPE
Sbjct: 121 NEWIILDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPE 167

[Close]

BLAST of Lcy13g000440 vs. NCBI nr
Match: XP_022945039.1 (uncharacterized protein LOC111449401 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 4.5e-75
Identity = 151/167 (90.42%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MAASRTVLRSASIFLTEPSRPVHFSRA-SSSFSVGTRRSFTHRLNCNVRSTRARGFHFPE 60
           MAASR VLRSASIFLTEPSRP HFSRA SSSF++GTRRSFTHRLNCNV S+RARGFHFPE
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHRLNCNVWSSRARGFHFPE 60

Query: 61  RTVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120
           RT LNCS D+TQ TSSS+QDGQGPPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVTDDST
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           NEWI LDQKVNSYPGVRGFTAIGTGG DFVQSMVVAVESV+QQPIPE
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGHDFVQSMVVAVESVIQQPIPE 167

[Close]

BLAST of Lcy13g000440 vs. TAIR 10
Match: AT1G27385.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-35
Identity = 93/176 (52.84%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 3   ASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSF----------THRLNCNVRSTRA 62
           A +T+LR  S+F++E  R           + G RR F           H L    +S   
Sbjct: 2   ACKTILR--SVFVSESRR-----------TSGARRCFFLPPSPASVPVHGLFPAPKSLCF 61

Query: 63  RGF-HFPER-TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVI 122
            GF   PER T LNCS+        ++Q  QGPPQEAVLKAISEVSKT+GRVG TTNM+I
Sbjct: 62  NGFASVPERATRLNCSH--------NDQSDQGPPQEAVLKAISEVSKTDGRVGKTTNMII 121

Query: 123 GGTVTDDSTNEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           GGTV DDS  +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE
Sbjct: 122 GGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPE 156

[Close]

BLAST of Lcy13g000440 vs. TAIR 10
Match: AT1G27385.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 77 Blast hits to 77 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-35
Identity = 93/176 (52.84%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 3   ASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSF----------THRLNCNVRSTRA 62
           A +T+LR  S+F++E  R           + G RR F           H L    +S   
Sbjct: 2   ACKTILR--SVFVSESRR-----------TSGARRCFFLPPSPASVPVHGLFPAPKSLCF 61

Query: 63  RGF-HFPER-TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVI 122
            GF   PER T LNCS+        ++Q  QGPPQEAVLKAISEVSKT+GRVG TTNM+I
Sbjct: 62  NGFASVPERATRLNCSH--------NDQSDQGPPQEAVLKAISEVSKTDGRVGKTTNMII 121

Query: 123 GGTVTDDSTNEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           GGTV DDS  +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE
Sbjct: 122 GGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPE 156

[Close]

BLAST of Lcy13g000440 vs. TAIR 10
Match: AT1G27385.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-33
Identity = 92/176 (52.27%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 3   ASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSF----------THRLNCNVRSTRA 62
           A +T+LR  S+F++E  R           + G RR F           H L    +S   
Sbjct: 2   ACKTILR--SVFVSESRR-----------TSGARRCFFLPPSPASVPVHGLFPAPKSLCF 61

Query: 63  RGF-HFPER-TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVI 122
            GF   PER T LNCS+        ++Q  QGPPQEAVLKAIS VSKT+GRVG TTNM+I
Sbjct: 62  NGFASVPERATRLNCSH--------NDQSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMII 121

Query: 123 GGTVTDDSTNEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           GGTV DDS  +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE
Sbjct: 122 GGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPE 155

[Close]

BLAST of Lcy13g000440 vs. TAIR 10
Match: AT1G27385.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-33
Identity = 92/176 (52.27%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 3   ASRTVLRSASIFLTEPSRPVHFSRASSSFSVGTRRSF----------THRLNCNVRSTRA 62
           A +T+LR  S+F++E  R           + G RR F           H L    +S   
Sbjct: 2   ACKTILR--SVFVSESRR-----------TSGARRCFFLPPSPASVPVHGLFPAPKSLCF 61

Query: 63  RGF-HFPER-TVLNCSYDQTQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVI 122
            GF   PER T LNCS+        ++Q  QGPPQEAVLKAIS VSKT+GRVG TTNM+I
Sbjct: 62  NGFASVPERATRLNCSH--------NDQSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMII 121

Query: 123 GGTVTDDSTNEWITLDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPE 167
           GGTV DDS  +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE
Sbjct: 122 GGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPE 155

The following BLAST results are available for this feature:

BLAST of Lcy13g000440 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy13g000440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC16	3.9e-77	91.57	uncharacterized protein LOC111019651 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HTC4	4.3e-76	91.02	uncharacterized protein LOC111466408 OS=Cucurbita maxima OX=3661 GN=LOC111466408...	[more]
A0A6J1FZV2	2.2e-75	90.42	uncharacterized protein LOC111449401 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1KAN5	2.2e-72	87.95	uncharacterized protein LOC111493214 OS=Cucurbita maxima OX=3661 GN=LOC111493214...	[more]
A0A6J1GWI1	6.5e-72	87.35	uncharacterized protein LOC111458218 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]

BLAST of Lcy13g000440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542309.1	5.6e-78	92.17	uncharacterized protein LOC111802242 [Cucurbita pepo subsp. pepo]	[more]
KAG6573590.1	9.6e-78	90.17	hypothetical protein SDJN03_27477, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022151740.1	8.1e-77	91.57	uncharacterized protein LOC111019651 isoform X1 [Momordica charantia]	[more]
XP_022966813.1	9.0e-76	91.02	uncharacterized protein LOC111466408 [Cucurbita maxima]	[more]
XP_022945039.1	4.5e-75	90.42	uncharacterized protein LOC111449401 [Cucurbita moschata]	[more]

BLAST of Lcy13g000440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27385.1	4.8e-35	52.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.3	4.8e-35	52.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.2	4.5e-33	52.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27385.4	4.5e-33	52.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34782	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	coord: 3..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g000440.1	Lcy13g000440.1	mRNA