Lcy12g022470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g022470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc protease PQQL-like
Location	Chr12: 49247775 .. 49249041 (+)
RNA-Seq Expression	Lcy12g022470
Synteny	Lcy12g022470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTATTAGGTTAAGTGACCTTCAAAAAGTTGATCCACAAAAGGCCTGTGAATATTTCAACGACTGTTTCAAAGGTCCATCCAATTTTACTGTTGTAATTGTTGGGAATATTAATCATTCCATAACACTTCATTTAATACAGCAGTATTTGGTACGTGTGCATTTAGTCTGCTTACGCACAACAACATTTGCTTTTCGTGATAAGTAAGGTTTTGATTTCCTTAAGCAAGGTGGAATACCAAAGACTCCTAAACCTATTATGAACTTCAATCGCGATGACCTGAAGGGCTTGCCATTCACTTTTCCTACAAGGATAGTTTCGGTATAGTGCACTAGACCTTGTATTCAAATTCATTGATTATAGACACAAAGCATGTTTACCAAATGTGTCATATTATTAAGGGAAAAATACACTTTTAGTCCCTGAGGTTTGAGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAATTCAACAATTTAGTCCCTAAGGTTTGGTTTTAGTTTCATTTTGGTCCCTCCATCCATTTTTCCGTTAGTATTTAACGGATGGCTGATGTGGCATTGATTTTTTAATTAAAAAATCATTTTTTATTTTTTAAAATATAAATATATTATTATTTTATATATTTTTTTAATTCGTTCTCCCTCCCTTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTCTTCCAACCGTCGGCAACCTTCTTCTTCTTCAAACCGTCGGCGACTATGTTTCATTTTTTTTAATCTTTTTCTTTCATTCTTTCTTATTCCTCTTTTCTTTTCTTATTTTCTTTCTTTTCAGTTTTCATTTTTCTGCATTTCTTCTCTCTCAGTTTAGATCTATCTCCCTTCCTCTTTCTCTCCCCTGCGTGGCAACTACCGCCCTTGCCATCTCCCTCTCTTTCCTTCGCCACTACCGTCGTCCCTTCGCCATCTACCTCTCTTTCTCTAGGAATATTTTCAGACCGACCCCTTCGATTCCACGACTACTCTTTTCGCAATCCATCTCACTCTCGTTCTTCTCTCCGATTCGTCGTGCCCGATTCCCGCATCCAACCCATCGATTCCCCTTCTGTCGCAGCTATGTTCGTTCCCTCTAGCCTTGAAATCGACTGGATTTTTTCCATGGAACCTGAACACTATCAGCTTCTCTTCGACTCACCGCTGGATTTTTGCACCTCATTCTAGTCGAAAATCAAGAATCGGTGATTTACGATCGTGGATCGTTCGTCGGACGAGGTTTCGGCTTCCTCCTGGACTCTACTGA

mRNA sequence

CCTATTAGGTTAAGTGACCTTCAAAAAGTTGATCCACAAAAGGCCTGTGAATATTTCAACGACTGTTTCAAAGGTTTTGATTTCCTTAAGCAAGGTGGAATACCAAAGACTCCTAAACCTATTATGAACTTCAATCGCGATGACCTGAAGGGCTTGCCATTCACTTTTCCTACAAGGATAGTTTCGGAATATTTTCAGACCGACCCCTTCGATTCCACGACTACTCTTTTCGCAATCCATCTCACTCTCGTTCTTCTCTCCGATTCGTCGTGCCCGATTCCCGCATCCAACCCATCGATTCCCCTTCTGTCGCAGCTATGTTCGTTCCCTCTAGCCTTGAAATCGACTGGATTTTTTCCATGGAACCTGAACACTATCAGCTTCTCTTCGACTCACCGCTGGATTTTTGCACCTCATTCTAGTCGAAAATCAAGAATCGGTGATTTACGATCGTGGATCGTTCGTCGGACGAGGTTTCGGCTTCCTCCTGGACTCTACTGA

Coding sequence (CDS)

CCTATTAGGTTAAGTGACCTTCAAAAAGTTGATCCACAAAAGGCCTGTGAATATTTCAACGACTGTTTCAAAGGTTTTGATTTCCTTAAGCAAGGTGGAATACCAAAGACTCCTAAACCTATTATGAACTTCAATCGCGATGACCTGAAGGGCTTGCCATTCACTTTTCCTACAAGGATAGTTTCGGAATATTTTCAGACCGACCCCTTCGATTCCACGACTACTCTTTTCGCAATCCATCTCACTCTCGTTCTTCTCTCCGATTCGTCGTGCCCGATTCCCGCATCCAACCCATCGATTCCCCTTCTGTCGCAGCTATGTTCGTTCCCTCTAGCCTTGAAATCGACTGGATTTTTTCCATGGAACCTGAACACTATCAGCTTCTCTTCGACTCACCGCTGGATTTTTGCACCTCATTCTAGTCGAAAATCAAGAATCGGTGATTTACGATCGTGGATCGTTCGTCGGACGAGGTTTCGGCTTCCTCCTGGACTCTACTGA

Protein sequence

PIRLSDLQKVDPQKACEYFNDCFKGFDFLKQGGIPKTPKPIMNFNRDDLKGLPFTFPTRIVSEYFQTDPFDSTTTLFAIHLTLVLLSDSSCPIPASNPSIPLLSQLCSFPLALKSTGFFPWNLNTISFSSTHRWIFAPHSSRKSRIGDLRSWIVRRTRFRLPPGLY

Homology

[Close]

BLAST of Lcy12g022470 vs. ExPASy Swiss-Prot
Match: Q9FJT9 (Zinc protease PQQL-like OS=Arabidopsis thaliana OX=3702 GN=At5g56730 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIR+S+L+KVDP KACEYFN CF+                     + Q  GGIPK P+P+
Sbjct: 631 PIRISELRKVDPLKACEYFNSCFRDPSTFTVVIVGNLDPTIALPLILQYLGGIPKPPQPV 690

Query: 61  MNFNRDDLKGLPFTFPTRIVSEYFQTDPFD---STTTLFAIHLT 83
           +NFNRDDLKGLPFTFPT+I  E+ ++   +   S    F + LT
Sbjct: 691 LNFNRDDLKGLPFTFPTKITKEFVRSPMVEAQCSVQLCFPVQLT 734

[Close]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL
Match: A0A6J1G452 (zinc protease PQQL-like OS=Cucurbita moschata OX=3662 GN=LOC111450570 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 741 MNFNRDDLKGLPFTFPTRIVRE 762

[Close]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL
Match: A0A6J1KAU8 (zinc protease PQQL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493804 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18
Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 719 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 778

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPT IV E
Sbjct: 779 MNFNRDDLKGLPFTFPTSIVRE 800

[Close]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL
Match: A0A6J1KJP3 (zinc protease PQQL-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493804 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18
Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPT IV E
Sbjct: 741 MNFNRDDLKGLPFTFPTSIVRE 762

[Close]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL
Match: A0A5D3CHC6 (Zinc protease PQQL-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00830 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.9e-17
Identity = 48/82 (58.54%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRL DL+KVDPQ+ACEYFN CF+                     ++Q  GGIPK P+PI
Sbjct: 680 PIRLRDLKKVDPQRACEYFNKCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 739

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPF FPTRIV E
Sbjct: 740 MNFNRDDLKGLPFKFPTRIVRE 761

[Close]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL
Match: A0A1S3C9Q7 (zinc protease PQQL-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498391 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.9e-17
Identity = 48/82 (58.54%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRL DL+KVDPQ+ACEYFN CF+                     ++Q  GGIPK P+PI
Sbjct: 680 PIRLRDLKKVDPQRACEYFNKCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 739

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPF FPTRIV E
Sbjct: 740 MNFNRDDLKGLPFKFPTRIVRE 761

[Close]

BLAST of Lcy12g022470 vs. NCBI nr
Match: KAG6599499.1 (Zinc protease PQQL-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 111 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 170

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 171 MNFNRDDLKGLPFTFPTRIVRE 192

[Close]

BLAST of Lcy12g022470 vs. NCBI nr
Match: KAG6599500.1 (Zinc protease PQQL-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 741 MNFNRDDLKGLPFTFPTRIVRE 762

[Close]

BLAST of Lcy12g022470 vs. NCBI nr
Match: KAG7030476.1 (Zinc protease PQQL-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 741 MNFNRDDLKGLPFTFPTRIVRE 762

[Close]

BLAST of Lcy12g022470 vs. NCBI nr
Match: XP_023546539.1 (zinc protease PQQL-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 741 MNFNRDDLKGLPFTFPTRIVRE 762

[Close]

BLAST of Lcy12g022470 vs. NCBI nr
Match: XP_022946533.1 (zinc protease PQQL-like [Cucurbita moschata])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIRLSDLQKVDPQKACEYFN+CF+                     ++Q  GGIPK P+PI
Sbjct: 681 PIRLSDLQKVDPQKACEYFNNCFRDPSNFTVVVVGNINPSIALPLIQQYLGGIPKPPEPI 740

Query: 61  MNFNRDDLKGLPFTFPTRIVSE 64
           MNFNRDDLKGLPFTFPTRIV E
Sbjct: 741 MNFNRDDLKGLPFTFPTRIVRE 762

[Close]

BLAST of Lcy12g022470 vs. TAIR 10
Match: AT5G56730.1 (Insulinase (Peptidase family M16) protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 1   PIRLSDLQKVDPQKACEYFNDCFK-----------------GFDFLKQ--GGIPKTPKPI 60
           PIR+S+L+KVDP KACEYFN CF+                     + Q  GGIPK P+P+
Sbjct: 631 PIRISELRKVDPLKACEYFNSCFRDPSTFTVVIVGNLDPTIALPLILQYLGGIPKPPQPV 690

Query: 61  MNFNRDDLKGLPFTFPTRIVSEYFQTDPFD---STTTLFAIHLT 83
           +NFNRDDLKGLPFTFPT+I  E+ ++   +   S    F + LT
Sbjct: 691 LNFNRDDLKGLPFTFPTKITKEFVRSPMVEAQCSVQLCFPVQLT 734

The following BLAST results are available for this feature:

BLAST of Lcy12g022470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJT9	1.7e-18	46.15	Zinc protease PQQL-like OS=Arabidopsis thaliana OX=3702 GN=At5g56730 PE=1 SV=1	[more]

BLAST of Lcy12g022470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G452	4.8e-19	63.41	zinc protease PQQL-like OS=Cucurbita moschata OX=3662 GN=LOC111450570 PE=3 SV=1	[more]
A0A6J1KAU8	2.4e-18	62.20	zinc protease PQQL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493804 P...	[more]
A0A6J1KJP3	2.4e-18	62.20	zinc protease PQQL-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493804 P...	[more]
A0A5D3CHC6	9.9e-17	58.54	Zinc protease PQQL-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C9Q7	9.9e-17	58.54	zinc protease PQQL-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498391 PE=3 ...	[more]

BLAST of Lcy12g022470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599499.1	9.8e-19	63.41	Zinc protease PQQL-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6599500.1	9.8e-19	63.41	Zinc protease PQQL-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030476.1	9.8e-19	63.41	Zinc protease PQQL-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023546539.1	9.8e-19	63.41	zinc protease PQQL-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946533.1	9.8e-19	63.41	zinc protease PQQL-like [Cucurbita moschata]	[more]

BLAST of Lcy12g022470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56730.1	1.2e-19	46.15	Insulinase (Peptidase family M16) protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g022470.1	Lcy12g022470.1	mRNA