Lcy12g022440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g022440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CP12 domain-containing protein
Location	Chr12: 49231693 .. 49232076 (+)
RNA-Seq Expression	Lcy12g022440
Synteny	Lcy12g022440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGATCGCAGTTCCAGTGGTTGCCTCTCTGAGATCGTCTAGAGGGTTTCAGGAGAAAATACCAATACCGTATCGGAGACTCAGCGGCAAGAATCAGAGGGTGAGAGCAATGGGCATGGCAAAATACAAATACAAATACAAAGGAACGCATATGAGAGAGAAGCATCTGACGGAACTGATCGAGAAGAAGGTGATAGAAGCGGAGGAGGTTTGCAAGGGAGACCAGACCTCAGACGAGTGCAAGGTGGCGTGGGACCAAGTGGAGGAGGTTAGCCAAGCCAAGGCCCATCTCCTGCGTAAACTTGACACCCAAGATCCACTCGAGTATTTCTGTCGAGACAATCCTCAGCTTGACGAGTGTCAGATTTACGAGGAATAA

mRNA sequence

ATGGCTTCGATCGCAGTTCCAGTGGTTGCCTCTCTGAGATCGTCTAGAGGGTTTCAGGAGAAAATACCAATACCGTATCGGAGACTCAGCGGCAAGAATCAGAGGGTGAGAGCAATGGGCATGGCAAAATACAAATACAAATACAAAGGAACGCATATGAGAGAGAAGCATCTGACGGAACTGATCGAGAAGAAGGTGATAGAAGCGGAGGAGGTTTGCAAGGGAGACCAGACCTCAGACGAGTGCAAGGTGGCGTGGGACCAAGTGGAGGAGGTTAGCCAAGCCAAGGCCCATCTCCTGCGTAAACTTGACACCCAAGATCCACTCGAGTATTTCTGTCGAGACAATCCTCAGCTTGACGAGTGTCAGATTTACGAGGAATAA

Coding sequence (CDS)

ATGGCTTCGATCGCAGTTCCAGTGGTTGCCTCTCTGAGATCGTCTAGAGGGTTTCAGGAGAAAATACCAATACCGTATCGGAGACTCAGCGGCAAGAATCAGAGGGTGAGAGCAATGGGCATGGCAAAATACAAATACAAATACAAAGGAACGCATATGAGAGAGAAGCATCTGACGGAACTGATCGAGAAGAAGGTGATAGAAGCGGAGGAGGTTTGCAAGGGAGACCAGACCTCAGACGAGTGCAAGGTGGCGTGGGACCAAGTGGAGGAGGTTAGCCAAGCCAAGGCCCATCTCCTGCGTAAACTTGACACCCAAGATCCACTCGAGTATTTCTGTCGAGACAATCCTCAGCTTGACGAGTGTCAGATTTACGAGGAATAA

Protein sequence

MASIAVPVVASLRSSRGFQEKIPIPYRRLSGKNQRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIYEE

Homology

[Close]

BLAST of Lcy12g022440 vs. ExPASy Swiss-Prot
Match: Q9C9K2 (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 39  MGMAKYKYKYKGTHMREKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAH 98
           M + K   KY GT MRE+ L+E+IE+KV EA EVC+ ++ S+EC+VAWD+VEEVSQA+A 
Sbjct: 44  MMVTKATAKYMGTKMREEKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARAD 103

Query: 99  LLRKLD--TQDPLEYFCRDNPQLDECQIYEE 128
           L  KL    QDPLE FC++NP+ DEC+IYE+
Sbjct: 104 LRIKLKLLNQDPLESFCQENPETDECRIYED 134

[Close]

BLAST of Lcy12g022440 vs. ExPASy Swiss-Prot
Match: Q9LZP9 (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-13
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 55  EKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHL--LRKLDTQDPLEYF 114
           E  +++++EK + EA+E C GD  S EC  AWD+VEE+S A +H    +K D  DPLE +
Sbjct: 57  EGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEY 116

Query: 115 CRDNPQLDECQIYE 127
           C+DNP+ +EC+ Y+
Sbjct: 117 CKDNPETNECRTYD 130

[Close]

BLAST of Lcy12g022440 vs. ExPASy Swiss-Prot
Match: O22914 (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-12
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 37  RAMGMAKYKYKYKGTHMR---------EKHLTELIEKKVIEAEEVCKGDQTSDECKVAWD 96
           R +G  +  Y +K   M+         E  ++E +EK + EA+E C  D  S EC  AWD
Sbjct: 23  RVLGPVRLNYPWKFGSMKRMVVVKATSEGEISEKVEKSIQEAKETCADDPVSGECVAAWD 82

Query: 97  QVEEVSQAKAHL--LRKLDTQDPLEYFCRDNPQLDECQIYE 127
           +VEE+S A +H    +K    DPLE +C DNP+ DEC+ Y+
Sbjct: 83  EVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYD 123

[Close]

BLAST of Lcy12g022440 vs. ExPASy Swiss-Prot
Match: A6Q0K5 (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 58  LTELIEKKVIEAEEVC-KGDQTSDECKVAWDQVEEVSQAKAH----LLRKLDTQDPLEYF 117
           L + ++  V EAE+ C KG  TS +C VAWD VEE+S A +H    +   +   DPLE F
Sbjct: 35  LNKKVQDAVKEAEDACAKG--TSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAF 94

Query: 118 CRDNPQLDECQIYEE 128
           C+D P  DEC++YE+
Sbjct: 95  CKDAPDADECRVYED 107

[Close]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL
Match: A0A6J1DXW2 (calvin cycle protein CP12-3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024065 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.6e-45
Identity = 97/127 (76.38%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASIAVPVVASLRSSRGFQEKIPIPYRRLSGKNQRVRAMGMAKYKYKYKGTHMREKHLTE 60
           MASI  P VA+L+S  GF EK  +PY +LS K+Q VRAMGMAKYKYKYKGT MREKHLTE
Sbjct: 1   MASIVAP-VAALKSCNGFLEK-KMPYLKLSDKSQPVRAMGMAKYKYKYKGTQMREKHLTE 60

Query: 61  LIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLD 120
           +IEKKV+EA+EVC+GD+TSDECKVAWD VEE+SQAKAH L KL  QDPLEYFCRDNP LD
Sbjct: 61  MIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLD 120

Query: 121 ECQIYEE 128
           ECQIY+E
Sbjct: 121 ECQIYQE 125

[Close]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL
Match: A0A6J1FK63 (calvin cycle protein CP12-3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111446478 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R S+G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 22  SVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVM 81

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 82  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 141

[Close]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL
Match: A0A6J1J1E6 (calvin cycle protein CP12-3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480996 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.0e-37
Identity = 88/122 (72.13%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R  +G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 18  SVRPCKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMSKYKYKGTRMREKLLTEMIEKKVM 77

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 78  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 137

[Close]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL
Match: A0A2C9VX76 (CP12 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G129800 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 8   VVASLRSSRGFQEKI---PIPYRRLSGK---NQRVRAMGMAKYKYKYKGTHMREKHLTEL 67
           +++S  SSR    K+    + ++R  GK   N RVRAMG A    K+KGT MREKHLTE+
Sbjct: 21  ILSSSLSSRSDACKVFLNSLAFKRPEGKAAMNLRVRAMGGAP---KFKGTQMREKHLTEM 80

Query: 68  IEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDE 127
           IEKK+IEA+EVC+GDQTSDECKVAWD+VEEVSQAKA    KL+ QDPLEYFC+DNP+ DE
Sbjct: 81  IEKKIIEAKEVCEGDQTSDECKVAWDEVEEVSQAKADFRLKLEKQDPLEYFCQDNPETDE 140

[Close]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL
Match: B9R8V0 (CP12 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1602310 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.0e-30
Identity = 69/96 (71.88%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 31  GKNQRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVE 90
           G N RV AMG A    K+KGT MREKHLTE+IEKKV+EA+EVC+GDQTSDECKVAWD+VE
Sbjct: 49  GMNLRVEAMGGAP---KFKGTQMREKHLTEMIEKKVMEAKEVCEGDQTSDECKVAWDEVE 108

Query: 91  EVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIYE 127
           EVSQAKA    KL+ +DPLEYFC+DNP+ DEC++YE
Sbjct: 109 EVSQAKADFRLKLEKRDPLEYFCQDNPETDECRVYE 141

[Close]

BLAST of Lcy12g022440 vs. NCBI nr
Match: XP_022157376.1 (calvin cycle protein CP12-3, chloroplastic [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 97/127 (76.38%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASIAVPVVASLRSSRGFQEKIPIPYRRLSGKNQRVRAMGMAKYKYKYKGTHMREKHLTE 60
           MASI  P VA+L+S  GF EK  +PY +LS K+Q VRAMGMAKYKYKYKGT MREKHLTE
Sbjct: 1   MASIVAP-VAALKSCNGFLEK-KMPYLKLSDKSQPVRAMGMAKYKYKYKGTQMREKHLTE 60

Query: 61  LIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLD 120
           +IEKKV+EA+EVC+GD+TSDECKVAWD VEE+SQAKAH L KL  QDPLEYFCRDNP LD
Sbjct: 61  MIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLD 120

Query: 121 ECQIYEE 128
           ECQIY+E
Sbjct: 121 ECQIYQE 125

[Close]

BLAST of Lcy12g022440 vs. NCBI nr
Match: KAG7037981.1 (Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-37
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R S+G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 20  SVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVM 79

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 80  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 139

[Close]

BLAST of Lcy12g022440 vs. NCBI nr
Match: KAG6608664.1 (Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-37
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R S+G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 22  SVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVM 81

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 82  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 141

[Close]

BLAST of Lcy12g022440 vs. NCBI nr
Match: XP_022941081.1 (calvin cycle protein CP12-3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-37
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R S+G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 22  SVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVM 81

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 82  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 141

[Close]

BLAST of Lcy12g022440 vs. NCBI nr
Match: XP_022982015.1 (calvin cycle protein CP12-3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 1.0e-36
Identity = 88/122 (72.13%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 11  SLRSSRGFQEKIPIPYRRLSGKN---QRVRAMGMAKYKYKYKGTHMREKHLTELIEKKVI 70
           S+R  +G QEKI      +  +    QR RAM ++  KYKYKGT MREK LTE+IEKKV+
Sbjct: 18  SVRPCKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMSKYKYKGTRMREKLLTEMIEKKVM 77

Query: 71  EAEEVCKGDQT--SDECKVAWDQVEEVSQAKAHLLRKLDTQDPLEYFCRDNPQLDECQIY 128
           EA+EVCKGD+T  SDECKVAWDQVEEVSQAKAHLLRKL TQDPLEYFCRDNPQLDECQIY
Sbjct: 78  EAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIY 137

[Close]

BLAST of Lcy12g022440 vs. TAIR 10
Match: AT1G76560.1 (CP12 domain-containing protein 3 )

HSP 1 Score: 104.0 bits (258), Expect = 9.1e-23
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 39  MGMAKYKYKYKGTHMREKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAH 98
           M + K   KY GT MRE+ L+E+IE+KV EA EVC+ ++ S+EC+VAWD+VEEVSQA+A 
Sbjct: 44  MMVTKATAKYMGTKMREEKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARAD 103

Query: 99  LLRKLD--TQDPLEYFCRDNPQLDECQIYEE 128
           L  KL    QDPLE FC++NP+ DEC+IYE+
Sbjct: 104 LRIKLKLLNQDPLESFCQENPETDECRIYED 134

[Close]

BLAST of Lcy12g022440 vs. TAIR 10
Match: AT3G62410.1 (CP12 domain-containing protein 2 )

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 55  EKHLTELIEKKVIEAEEVCKGDQTSDECKVAWDQVEEVSQAKAHL--LRKLDTQDPLEYF 114
           E  +++++EK + EA+E C GD  S EC  AWD+VEE+S A +H    +K D  DPLE +
Sbjct: 57  EGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEY 116

Query: 115 CRDNPQLDECQIYE 127
           C+DNP+ +EC+ Y+
Sbjct: 117 CKDNPETNECRTYD 130

[Close]

BLAST of Lcy12g022440 vs. TAIR 10
Match: AT2G47400.1 (CP12 domain-containing protein 1 )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 37  RAMGMAKYKYKYKGTHMR---------EKHLTELIEKKVIEAEEVCKGDQTSDECKVAWD 96
           R +G  +  Y +K   M+         E  ++E +EK + EA+E C  D  S EC  AWD
Sbjct: 23  RVLGPVRLNYPWKFGSMKRMVVVKATSEGEISEKVEKSIQEAKETCADDPVSGECVAAWD 82

Query: 97  QVEEVSQAKAHL--LRKLDTQDPLEYFCRDNPQLDECQIYE 127
           +VEE+S A +H    +K    DPLE +C DNP+ DEC+ Y+
Sbjct: 83  EVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYD 123

The following BLAST results are available for this feature:

BLAST of Lcy12g022440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K2	1.3e-21	58.24	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9LZP9	2.9e-13	45.95	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
O22914	3.2e-12	38.61	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
A6Q0K5	1.6e-08	45.33	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN...	[more]

BLAST of Lcy12g022440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXW2	8.6e-45	76.38	calvin cycle protein CP12-3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1FK63	1.3e-37	72.95	calvin cycle protein CP12-3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J1E6	5.0e-37	72.13	calvin cycle protein CP12-3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A2C9VX76	1.4e-31	61.90	CP12 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G129800 P...	[more]
B9R8V0	6.0e-30	71.88	CP12 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1602310 PE=4 ...	[more]

BLAST of Lcy12g022440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157376.1	1.8e-44	76.38	calvin cycle protein CP12-3, chloroplastic [Momordica charantia]	[more]
KAG7037981.1	2.7e-37	72.95	Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
KAG6608664.1	2.7e-37	72.95	Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
XP_022941081.1	2.7e-37	72.95	calvin cycle protein CP12-3, chloroplastic [Cucurbita moschata]	[more]
XP_022982015.1	1.0e-36	72.13	calvin cycle protein CP12-3, chloroplastic [Cucurbita maxima]	[more]

BLAST of Lcy12g022440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76560.1	9.1e-23	58.24	CP12 domain-containing protein 3	[more]
AT3G62410.1	2.0e-14	45.95	CP12 domain-containing protein 2	[more]
AT2G47400.1	2.3e-13	38.61	CP12 domain-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 58..127 e-value: 7.8E-15 score: 65.3
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 58..126 e-value: 1.3E-21 score: 77.0
IPR039314	Calvin cycle protein CP12-like	PANTHER	PTHR33921	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 31..127
None	No IPR available	PANTHER	PTHR33921:SF16	CALVIN CYCLE PROTEIN CP12-3, CHLOROPLASTIC	coord: 31..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g022440.1	Lcy12g022440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080153	negative regulation of reductive pentose-phosphate cycle
cellular_component	GO:0009507	chloroplast