Lcy12g022200 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g022200
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-H2 finger protein ATL80-like
Location	Chr12: 49111512 .. 49113346 (+)
RNA-Seq Expression	Lcy12g022200
Synteny	Lcy12g022200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTATTAGTTTTAATTTATAATATAAATTAACATTTAACCGTAATGGATTAAATGTACGTGGTGGCGTGTATATGAACGCCGTTAGAATTGAGGTGGGTGAGTGTAATGAGAAAGCTCCCAAAGCGAAAAAACGAAAGCCGATTCCCGTGTTCAGTATAAAACCCCTCAAAATCCCCTCGAAACGACAAACGTTACGCCCATAGTTCATTCAAAACGACTGCCCTTCCCTTCCCAGCTCTTATCTTAATAGCCTCTTCCCTTATCTCGCCGCTCCAAATGCGTCCCTTTAGGTACCTTGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGCGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCCCTTCTCTGCGCCTTGATTTGCGTTCTCGGCCTTGTTGCTGTTGCCCGCTGTGCCTGGCTACGCCACCTCGCCGGCGATGGCGGCGGCGCCGCTTCCAATCGTCCTCCTCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACCGCCGAGTTTGCTGCCCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGCGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGGCCTGTATCGACACGTGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGCTTTCCGGCGAGCTCGAGTTCGAACGGTGGGACCGATTCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAGCCCTAGGGTTTTTCTTTAACTACTGCGATTCTTGTTCCTTCCTTCCTTCCTCCGTGTTGTAAATAACTTTCTTAATCAAAATTCATGTAATTACTAGAAAATTGTGGATGTATTCAAGTTGTAAGCGAAGGCGATTTCCCTGGATTTGAAATCAGCCGCTCTGGTAGTTTCCTTGTGAATATTGACTTCAAATCTGTCGTCGATTTTCAGCCTCGGAATGTAATGGAGATGGCATAACTTTACAGTACAGGCGATGAAATCAAAAAGGGGAACAGTAACAGTATCAGTATCATGTGGATGGTGGACATTGTCTTGTGTCGACAACTGCCAATGTGATTTGTTTATTTGCATCTTGGATCGCATTTTTCCGCAGCTAATGGCTTCCTCTGCATCTCTCTTCAGAATGCCAATTCTTCTCTCTCATCCGCCCTGAAGATTAAAGAGGTCAGATCCAAAAAGTTTTGAAAATGGAATAATTCTGCCTGCAACTCCAACTCCAACTGCTCCCTTTCTGAATAAAATATTGCAATTCTCGAATCCAGATTTTACCTTCCATGGCCATTGCTGCTCTCTGTCCTTTTCGCTTTCACTTCTCTTCTCACCATGATAATTGCTAATCAAATCTTTTACAAACTTTTCGACTATTTTTTAATTTACTTCCTCAATCTTTATAAGTTTAATTTATTAAATTACCTTTTTAATTTGCTTAATTTGTGTCGAATCGTATTATTATTTCAATATCTGTGTTTCATCTGATCTGCAGATATTAACGGACGATTTTCCAGAACGGGGAAAATCAACGTGGGAGACAAAAGTTATTCTGAAATAAATATATTTCTGGAAAGGATATTGTTAAAGAAGAAAACTTTATAAAACAAAATTAATATTTTGTAGGAAAAAAAAAAAAAGGTTAGGTTTAGTGCCATTTATCCATCTAATCTCATAATAACAAATTTGAAGGAATAAAAAATCAAAGCCCCACTATTGTGTGAG

mRNA sequence

GAAGATTATTAGTTTTAATTTATAATATAAATTAACATTTAACCGTAATGGATTAAATGTACGTGGTGGCGTGTATATGAACGCCGTTAGAATTGAGGTGGGTGAGTGTAATGAGAAAGCTCCCAAAGCGAAAAAACGAAAGCCGATTCCCGTGTTCAGTATAAAACCCCTCAAAATCCCCTCGAAACGACAAACGTTACGCCCATAGTTCATTCAAAACGACTGCCCTTCCCTTCCCAGCTCTTATCTTAATAGCCTCTTCCCTTATCTCGCCGCTCCAAATGCGTCCCTTTAGGTACCTTGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGCGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCCCTTCTCTGCGCCTTGATTTGCGTTCTCGGCCTTGTTGCTGTTGCCCGCTGTGCCTGGCTACGCCACCTCGCCGGCGATGGCGGCGGCGCCGCTTCCAATCGTCCTCCTCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACCGCCGAGTTTGCTGCCCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGCGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGGCCTGTATCGACACGTGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGCTTTCCGGCGAGCTCGAGTTCGAACGGTGGGACCGATTCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAGCCCTAGGGTTTTTCTTTAACTACTGCGATTCTTGTTCCTTCCTTCCTTCCTCCGTGTTGTAAATAACTTTCTTAATCAAAATTCATGTAATTACTAGAAAATTGTGGATGTATTCAAGTTGTAAGCGAAGGCGATTTCCCTGGATTTGAAATCAGCCGCTCTGGTAGTTTCCTTGTGAATATTGACTTCAAATCTGTCGTCGATTTTCAGCCTCGGAATGTAATGGAGATGGCATAACTTTACAGTACAGGCGATGAAATCAAAAAGGGGAACAGTAACAGTATCAGTATCATGTGGATGGTGGACATTGTCTTGTGTCGACAACTGCCAATGTGATTTGTTTATTTGCATCTTGGATCGCATTTTTCCGCAGCTAATGGCTTCCTCTGCATCTCTCTTCAGAATGCCAATTCTTCTCTCTCATCCGCCCTGAAGATTAAAGAGGTCAGATCCAAAAAGTTTTGAAAATGGAATAATTCTGCCTGCAACTCCAACTCCAACTGCTCCCTTTCTGAATAAAATATTGCAATTCTCGAATCCAGATTTTACCTTCCATGGCCATTGCTGCTCTCTGTCCTTTTCGCTTTCACTTCTCTTCTCACCATGATAATTGCTAATCAAATCTTTTACAAACTTTTCGACTATTTTTTAATTTACTTCCTCAATCTTTATAAGTTTAATTTATTAAATTACCTTTTTAATTTGCTTAATTTGTGTCGAATCGTATTATTATTTCAATATCTGTGTTTCATCTGATCTGCAGATATTAACGGACGATTTTCCAGAACGGGGAAAATCAACGTGGGAGACAAAAGTTATTCTGAAATAAATATATTTCTGGAAAGGATATTGTTAAAGAAGAAAACTTTATAAAACAAAATTAATATTTTGTAGGAAAAAAAAAAAAAGGTTAGGTTTAGTGCCATTTATCCATCTAATCTCATAATAACAAATTTGAAGGAATAAAAAATCAAAGCCCCACTATTGTGTGAG

Coding sequence (CDS)

ATGCGTCCCTTTAGGTACCTTGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGCGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCCCTTCTCTGCGCCTTGATTTGCGTTCTCGGCCTTGTTGCTGTTGCCCGCTGTGCCTGGCTACGCCACCTCGCCGGCGATGGCGGCGGCGCCGCTTCCAATCGTCCTCCTCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACCGCCGAGTTTGCTGCCCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGCGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGGCCTGTATCGACACGTGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGCTTTCCGGCGAGCTCGAGTTCGAACGGTGGGACCGATTCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAG

Protein sequence

MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDKTNRFLP

Homology

[Close]

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.6e-55
Identity = 111/192 (57.81%), Postives = 137/192 (71.35%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD--- 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA     
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIR 123
             G    +  PP  A+NKGLKKK+L+SLPK TF+ E   + +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVK--- 183
           VLPQCGHGFHVACIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   ++  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGEDKTNRFLP 187
           ++GED  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-53
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGG 63
           FR L   NS++ ++ + P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIA-SRNR 65

Query: 64  AASNRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIRVLPQ 123
           +    PPP  A+NKGLKKK+LRSLPK T++ +   A +  +CAICL EFA GDE+RVLPQ
Sbjct: 66  SDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQ 125

Query: 124 CGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVK--EEGED 180
           CGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    D+R+K  E+G D
Sbjct: 126 CGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPD 182

[Close]

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-37
Identity = 79/149 (53.02%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKIL 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 85  RSLPKYTFTAEFAA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 144
           ++LPK T+TA  +                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 145 ACIDTWFRSHSSCPSCRQILVVSQCQKCG 158
           ACID W  S SSCPSCR+ILV  +C +CG
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCG 167

[Close]

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-35
Identity = 81/141 (57.45%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKIL 84
           +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDS---------PSPNKGLKKKAL 84

Query: 85  RSLPKYTFTAE-----FAAQFSD---CAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFR 144
           +SLP+ TFTA       AA+  D   CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 145 SHSSCPSCRQILVVSQCQKCG 158
           S SSCPSCR+IL   +C +CG
Sbjct: 145 SRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.4e-26
Identity = 68/156 (43.59%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 14  AISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPP 73
           ++S+       D+  VIILAALLCALIC LG+ +V RC  LR           N  P   
Sbjct: 27  SVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCV-LRCTR----RFTPNEDPVDT 86

Query: 74  ASN--KGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACI 133
            +N  KG+KK+ L+ +P  +++ E   + ++C ICL +F  G+ +RVLP+C HGFHV CI
Sbjct: 87  NANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCI 146

Query: 134 DTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG 168
           DTW  SHSSCP+CRQ L+  Q       PA+ S  G
Sbjct: 147 DTWLLSHSSCPTCRQSLLEHQT------PANGSRRG 171

[Close]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL
Match: A0A6J1FNK0 (RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGAAS RPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL
Match: A0A0A0L5Y2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 176/186 (94.62%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGA S RPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFH++CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVKEEG+DK
Sbjct: 121 QCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL
Match: A0A5A7VGL3 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00440 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 176/186 (94.62%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           G GA S RPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL
Match: A0A1S3BWC1 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 176/186 (94.62%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           G GA S RPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL
Match: A0A6J1IVW2 (RING-H2 finger protein ATL80 OS=Cucurbita maxima OX=3661 GN=LOC111481072 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGAAS RPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVK +GEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK-DGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. NCBI nr
Match: KAG6608649.1 (RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037966.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.3 bits (926), Expect = 5.0e-96
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGAAS RPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGT+SRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Lcy12g022200 vs. NCBI nr
Match: XP_022941514.1 (RING-H2 finger protein ATL80-like [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 6.5e-96
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGAAS RPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Lcy12g022200 vs. NCBI nr
Match: XP_023523429.1 (RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 6.5e-96
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GGAAS RPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  RGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Lcy12g022200 vs. NCBI nr
Match: XP_004145558.1 (RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein Csa_012171 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 176/186 (94.62%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           GGGA S RPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFH++CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVKEEG+DK
Sbjct: 121 QCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. NCBI nr
Match: XP_008453009.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK19932.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 176/186 (94.62%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
           G GA S RPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVKEEGEDK 180
           QCGHGFHV+CIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGT+SRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Lcy12g022200 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 5.4e-56
Identity = 111/192 (57.81%), Postives = 137/192 (71.35%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD--- 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA     
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GGGAASNRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIR 123
             G    +  PP  A+NKGLKKK+L+SLPK TF+ E   + +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVK--- 183
           VLPQCGHGFHVACIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   ++  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGEDKTNRFLP 187
           ++GED  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Lcy12g022200 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGG 63
           FR L   NS++ ++ + P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIA-SRNR 65

Query: 64  AASNRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIRVLPQ 123
           +    PPP  A+NKGLKKK+LRSLPK T++ +   A +  +CAICL EFA GDE+RVLPQ
Sbjct: 66  SDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQ 125

Query: 124 CGHGFHVACIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTDSRVK--EEGED 180
           CGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    D+R+K  E+G D
Sbjct: 126 CGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPD 182

[Close]

BLAST of Lcy12g022200 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38
Identity = 79/149 (53.02%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKIL 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 85  RSLPKYTFTAEFAA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 144
           ++LPK T+TA  +                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 145 ACIDTWFRSHSSCPSCRQILVVSQCQKCG 158
           ACID W  S SSCPSCR+ILV  +C +CG
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCG 167

[Close]

BLAST of Lcy12g022200 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-37
Identity = 81/141 (57.45%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPPASNKGLKKKIL 84
           +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDS---------PSPNKGLKKKAL 84

Query: 85  RSLPKYTFTAE-----FAAQFSD---CAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFR 144
           +SLP+ TFTA       AA+  D   CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 145 SHSSCPSCRQILVVSQCQKCG 158
           S SSCPSCR+IL   +C +CG
Sbjct: 145 SRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Lcy12g022200 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.2e-27
Identity = 68/156 (43.59%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 14  AISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASNRPPPPP 73
           ++S+       D+  VIILAALLCALIC LG+ +V RC  LR           N  P   
Sbjct: 27  SVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCV-LRCTR----RFTPNEDPVDT 86

Query: 74  ASN--KGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACI 133
            +N  KG+KK+ L+ +P  +++ E   + ++C ICL +F  G+ +RVLP+C HGFHV CI
Sbjct: 87  NANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCI 146

Query: 134 DTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG 168
           DTW  SHSSCP+CRQ L+  Q       PA+ S  G
Sbjct: 147 DTWLLSHSSCPTCRQSLLEHQT------PANGSRRG 171

The following BLAST results are available for this feature:

BLAST of Lcy12g022200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	7.6e-55	57.81	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	2.4e-53	58.89	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	2.4e-37	53.02	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	1.0e-35	57.45	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9FLC6	7.4e-26	43.59	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]

BLAST of Lcy12g022200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNK0	3.2e-96	94.09	RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 ...	[more]
A0A0A0L5Y2	7.0e-96	94.62	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 P...	[more]
A0A5A7VGL3	1.6e-95	94.62	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BWC1	1.6e-95	94.62	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1	[more]
A0A6J1IVW2	3.5e-95	94.09	RING-H2 finger protein ATL80 OS=Cucurbita maxima OX=3661 GN=LOC111481072 PE=4 SV...	[more]

BLAST of Lcy12g022200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608649.1	5.0e-96	94.09	RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022941514.1	6.5e-96	94.09	RING-H2 finger protein ATL80-like [Cucurbita moschata]	[more]
XP_023523429.1	6.5e-96	94.09	RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]	[more]
XP_004145558.1	1.5e-95	94.62	RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein C...	[more]
XP_008453009.1	3.2e-95	94.62	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 fin...	[more]

BLAST of Lcy12g022200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	5.4e-56	57.81	RING/U-box superfamily protein	[more]
AT1G76410.1	1.7e-54	58.89	RING/U-box superfamily protein	[more]
AT4G35480.1	1.7e-38	53.02	RING-H2 finger A3B	[more]
AT2G17450.1	7.3e-37	57.45	RING-H2 finger A3A	[more]
AT5G05280.1	5.2e-27	43.59	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 103..144 e-value: 8.0E-8 score: 42.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 102..145 e-value: 3.8E-14 score: 52.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 103..145 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..149 e-value: 9.7E-22 score: 78.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..178
None	No IPR available	PANTHER	PTHR45798:SF59	RING-H2 FINGER PROTEIN ATL8	coord: 2..178
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 102..145 e-value: 1.60654E-17 score: 70.4085
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g022200.1	Lcy12g022200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane