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Lcy12g020820 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATCCGCCATGCCGGCACCAAAAAATCTATGGGCACTAACAAAAAACCCGATTTTTAAAGTTGTTTTTTATTTTTTAAAACCGCGATTTTAAAATTTCATAAGCTAAACATTAATGAAACCTATCATTATCAATCAATAAAATCGCCACCAAAGCATTAAAACCAACATTAAGAAAGAAAAAAAAGAAGATTAATATTAAAGTTTTAGATAAGATCGGAGCCAAGAGATAAAGACACACTGCTGGGTAGTCGCCAACTTGGTATTTATATATTGTTCTCTTCGTACTAAGAAACCATCACAGTTTCATATCTGATTATCAAAGTTTGGATTTTGAGAGATGGGTTCTTTAATGGCGGGTTGGGACTCTCCGGCGAGTGACCCCGAAGAAGGTAATATTAATTTTTAGTTTAATTTCTGTTTTAATCCTAGTCTATTTTGATATCTGTATGATCAAAAGTGATCAAAAATGTTTTTTTTTTTTTTTTTAATTAGTGAGTCATCGGAGGAACAAATCATTGACAAAGGAAGAGATTGAAGCCTTCTGGAAAACGAAGAAGCAGTTGCATGAAGAACATCTAAGAGCTATTTTGAGTCCATTTGAGAGCTCTGAGGTTTCTGCTCAACTCATAGTCAACTGTCTTTTTCTTCTCTATGGATATTATCTTTGTCTTTCACTTAAGTTTTTTAAAGTTAAAATTTTGAGTTTTGAATTTTGGCAGGAAAAGAAGGTGGAGTTTGGTGGAAATCTTCAGAGATCAAGCTCTCTGCCTCCATTTAATACAAGGAAGGGTTTCTTGGACATGGAACCAGCTGAAACTAACTTAGACAAACCCAAGAAAAATGGCTGGTAATTAATTATTCTCTCTTCCATTCAAGATTAATTTATATTTTTAATTTTACTATCTAATAATTTGCACAGAATCGTTATAAATCTTACATCAAATAAAGTGTTTTTAATTAAACATTTTGTTAGAAAATATGATAATTGAAATATTTGTGTGATTTTACAGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCGCCTGTGACCGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCCAATATGGCGGCATCCAGACTTGGTCGTGGTGGAGTCAGTGCTTGAGAAACTCGAATCTTCGTTGTGTTGGGGTGTGTGTGTGATCCGGTGTTGTCATTGTGAAGAAGAAAAAAGAAAAAAAAAAAAAAAAAGTTGTAAATTAATTAATTATATTAGAATTCTTCTGAATTTCAGTGGTCTGTTTATGGGTTTTTCTTTTCTTTCTTAAATCAATTTATGGTGTATTTTGGTGAAGTGGAAGGCCTTTGTAAAAATATTAAATATTTTATTTATTATACTGAGTTTCATATTGAAGATTTTTTTTTTTTTTTTAAAGGTTATGCTTTCTCTTTTGTTTGGAGATATATTGAAGATAACATATTTGTTATAATGTAACAAGG CAAAATCCGCCATGCCGGCACCAAAAAATCTATGGGCACTAACAAAAAACCCGATTTTTAAAGTTGTTTTTTATTTTTTAAAACCGCGATTTTAAAATTTCATAAGCTAAACATTAATGAAACCTATCATTATCAATCAATAAAATCGCCACCAAAGCATTAAAACCAACATTAAGAAAGAAAAAAAAGAAGATTAATATTAAAGTTTTAGATAAGATCGGAGCCAAGAGATAAAGACACACTGCTGGGTAGTCGCCAACTTGGTATTTATATATTGTTCTCTTCGTACTAAGAAACCATCACAGTTTCATATCTGATTATCAAAGTTTGGATTTTGAGAGATGGGTTCTTTAATGGCGGGTTGGGACTCTCCGGCGAGTGACCCCGAAGAAGTGAGTCATCGGAGGAACAAATCATTGACAAAGGAAGAGATTGAAGCCTTCTGGAAAACGAAGAAGCAGTTGCATGAAGAACATCTAAGAGCTATTTTGAGTCCATTTGAGAGCTCTGAGGAAAAGAAGGTGGAGTTTGGTGGAAATCTTCAGAGATCAAGCTCTCTGCCTCCATTTAATACAAGGAAGGGTTTCTTGGACATGGAACCAGCTGAAACTAACTTAGACAAACCCAAGAAAAATGGCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCGCCTGTGACCGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCCAATATGGCGGCATCCAGACTTGGTCGTGGTGGAGTCAGTGCTTGAGAAACTCGAATCTTCGTTGTGTTGGGGTGTGTGTGTGATCCGGTGTTGTCATTGTGAAGAAGAAAAAAGAAAAAAAAAAAAAAAAAGTTGTAAATTAATTAATTATATTAGAATTCTTCTGAATTTCAGTGGTCTGTTTATGGGTTTTTCTTTTCTTTCTTAAATCAATTTATGGTGTATTTTGGTGAAGTGGAAGGCCTTTGTAAAAATATTAAATATTTTATTTATTATACTGAGTTTCATATTGAAGATTTTTTTTTTTTTTTTAAAGGTTATGCTTTCTCTTTTGTTTGGAGATATATTGAAGATAACATATTTGTTATAATGTAACAAGG ATGGGTTCTTTAATGGCGGGTTGGGACTCTCCGGCGAGTGACCCCGAAGAAGTGAGTCATCGGAGGAACAAATCATTGACAAAGGAAGAGATTGAAGCCTTCTGGAAAACGAAGAAGCAGTTGCATGAAGAACATCTAAGAGCTATTTTGAGTCCATTTGAGAGCTCTGAGGAAAAGAAGGTGGAGTTTGGTGGAAATCTTCAGAGATCAAGCTCTCTGCCTCCATTTAATACAAGGAAGGGTTTCTTGGACATGGAACCAGCTGAAACTAACTTAGACAAACCCAAGAAAAATGGCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCGCCTGTGACCGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCCAATATGGCGGCATCCAGACTTGGTCGTGGTGGAGTCAGTGCTTGA MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNGWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGRGGVSA Homology
BLAST of Lcy12g020820 vs. ExPASy TrEMBL
Match: A0A6J1FHE8 (uncharacterized protein LOC111445795 OS=Cucurbita moschata OX=3662 GN=LOC111445795 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65 Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 0
BLAST of Lcy12g020820 vs. ExPASy TrEMBL
Match: A0A6J1J1T2 (uncharacterized protein LOC111481065 OS=Cucurbita maxima OX=3661 GN=LOC111481065 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 8.4e-65 Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Lcy12g020820 vs. ExPASy TrEMBL
Match: A0A5D3D820 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00760 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62 Identity = 121/144 (84.03%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Lcy12g020820 vs. ExPASy TrEMBL
Match: A0A1S3CST6 (uncharacterized protein LOC103503930 OS=Cucumis melo OX=3656 GN=LOC103503930 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62 Identity = 121/144 (84.03%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Lcy12g020820 vs. ExPASy TrEMBL
Match: A0A0A0LDC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G859670 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61 Identity = 120/144 (83.33%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of Lcy12g020820 vs. NCBI nr
Match: XP_022940046.1 (uncharacterized protein LOC111445795 [Cucurbita moschata] >KAG6608544.1 hypothetical protein SDJN03_01886, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037867.1 hypothetical protein SDJN02_01498 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258.5 bits (659), Expect = 3.5e-65 Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 0
BLAST of Lcy12g020820 vs. NCBI nr
Match: XP_023525160.1 (uncharacterized protein LOC111788844 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64 Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Lcy12g020820 vs. NCBI nr
Match: XP_022982140.1 (uncharacterized protein LOC111481065 [Cucurbita maxima]) HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64 Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Lcy12g020820 vs. NCBI nr
Match: XP_038898962.1 (uncharacterized protein LOC120086405 [Benincasa hispida]) HSP 1 Score: 255.4 bits (651), Expect = 3.0e-64 Identity = 125/143 (87.41%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of Lcy12g020820 vs. NCBI nr
Match: XP_008466545.1 (PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo] >KAA0041574.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa] >TYK19682.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa]) HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62 Identity = 121/144 (84.03%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Lcy12g020820 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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