Lcy12g019940 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGCATTGACTAATTTTATCATTAAGCTCAAACAGTACGCACCTTTAATCGAACGCAGACGACAGTTCCCAAATTGGACGACACTGAAAGGCCGAATTCGATTCCATTTTTCGGCGACCGAATCAGAAAAGCCACACCAATCCGATGGAGAAGACACAAGATAACTCCGCATCTAAATTCTAATCGAGCCATCGATCATGGCGGTTCTTAGGGCTCAAGCCGCCGCCATCAGTCGTCAATTTCTATATAAATTCCCCTGATCTCCTTCACTTCAATCGCCAAGAAATTAAATCAAATCAAATCACACAGTCGATTACAGAACGATGTCGTCGCACGGTCGAAAATTGAAGTCGAAGCCGAGGGCGGCCGTCTCGTCGGAGAACTGCTACTCGGCGAAGGAACTGAAAGAGATCTTTAGGCAGATGGATACGAATGAAGACGGCGGATTGGGATTGTTCGAGATCAAGGACGCGCTGAAGCGACTCGACGCTGAATTGCCGGTTCATCTTGCTTTCAAGGCGCTCTGTCACGCCGATCAAAACAGAGATGGAAAGCTTGGCGAGGAGGAGATCGATCAGTTCGTCAAGTTCTTGATGAGCGAAGGTTATGTTGTGTGATTTAAGTGCGCCGCCGCCTCCGACATCGGCTCTCTGATCTCTGTCGGTCGTTGATCGTCGGTTTCCAAAAATTAAACTTATCAAATAAATGGCGGCTGCGTGTGTTATTGACTTATTATGATGAATTTATTACAGGACGTGTATTGTATTGTATTTGAATTTGTATTTGTATATGTATATGTTGTTTCTTTTGAATTCTCAATTCTATAGTTCAACTGAGATAAAATTTGTATTAATCACCTAGCGGTTTATGGTTCGAATTCCTCATCTTACATGTTGTTACAAGAAACCTACATTTTGATACGGTAAGGTTGAAATTCATCCTCCACTTCCATAATTGTTATAATTAATGCGTTATTTCATGTCCAAAC AATGCATTGACTAATTTTATCATTAAGCTCAAACAGTACGCACCTTTAATCGAACGCAGACGACAGTTCCCAAATTGGACGACACTGAAAGGCCGAATTCGATTCCATTTTTCGGCGACCGAATCAGAAAAGCCACACCAATCCGATGGAGAAGACACAAGATAACTCCGCATCTAAATTCTAATCGAGCCATCGATCATGGCGGTTCTTAGGGCTCAAGCCGCCGCCATCAGTCGTCAATTTCTATATAAATTCCCCTGATCTCCTTCACTTCAATCGCCAAGAAATTAAATCAAATCAAATCACACAGTCGATTACAGAACGATGTCGTCGCACGGTCGAAAATTGAAGTCGAAGCCGAGGGCGGCCGTCTCGTCGGAGAACTGCTACTCGGCGAAGGAACTGAAAGAGATCTTTAGGCAGATGGATACGAATGAAGACGGCGGATTGGGATTGTTCGAGATCAAGGACGCGCTGAAGCGACTCGACGCTGAATTGCCGGTTCATCTTGCTTTCAAGGCGCTCTGTCACGCCGATCAAAACAGAGATGGAAAGCTTGGCGAGGAGGAGATCGATCAGTTCGTCAAGTTCTTGATGAGCGAAGGTTATGTTGTGTGATTTAAGTGCGCCGCCGCCTCCGACATCGGCTCTCTGATCTCTGTCGGTCGTTGATCGTCGGTTTCCAAAAATTAAACTTATCAAATAAATGGCGGCTGCGTGTGTTATTGACTTATTATGATGAATTTATTACAGGACGTGTATTGTATTGTATTTGAATTTGTATTTGTATATGTATATGTTGTTTCTTTTGAATTCTCAATTCTATAGTTCAACTGAGATAAAATTTGTATTAATCACCTAGCGGTTTATGGTTCGAATTCCTCATCTTACATGTTGTTACAAGAAACCTACATTTTGATACGGTAAGGTTGAAATTCATCCTCCACTTCCATAATTGTTATAATTAATGCGTTATTTCATGTCCAAAC ATGTCGTCGCACGGTCGAAAATTGAAGTCGAAGCCGAGGGCGGCCGTCTCGTCGGAGAACTGCTACTCGGCGAAGGAACTGAAAGAGATCTTTAGGCAGATGGATACGAATGAAGACGGCGGATTGGGATTGTTCGAGATCAAGGACGCGCTGAAGCGACTCGACGCTGAATTGCCGGTTCATCTTGCTTTCAAGGCGCTCTGTCACGCCGATCAAAACAGAGATGGAAAGCTTGGCGAGGAGGAGATCGATCAGTTCGTCAAGTTCTTGATGAGCGAAGGTTATGTTGTGTGA MSSHGRKLKSKPRAAVSSENCYSAKELKEIFRQMDTNEDGGLGLFEIKDALKRLDAELPVHLAFKALCHADQNRDGKLGEEEIDQFVKFLMSEGYVV Homology
BLAST of Lcy12g019940 vs. ExPASy Swiss-Prot
Match: Q32NH8 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 OS=Xenopus laevis OX=8355 GN=plcd4 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.1e-04 Identity = 22/67 (32.84%), Postives = 36/67 (53.73%), Query Frame = 0
BLAST of Lcy12g019940 vs. ExPASy TrEMBL
Match: A0A0A0L3J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.7e-32 Identity = 72/97 (74.23%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of Lcy12g019940 vs. ExPASy TrEMBL
Match: A0A5D3D9N2 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003460 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.9e-32 Identity = 71/90 (78.89%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Lcy12g019940 vs. ExPASy TrEMBL
Match: W9S022 (Putative calcium-binding protein CML10 OS=Morus notabilis OX=981085 GN=L484_000100 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Lcy12g019940 vs. ExPASy TrEMBL
Match: A0A5N6RQD5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018542 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.3e-08 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Lcy12g019940 vs. ExPASy TrEMBL
Match: A0A5C7H618 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021566 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.7e-08 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Lcy12g019940 vs. NCBI nr
Match: KAG7037807.1 (hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.9 bits (372), Expect = 4.5e-32 Identity = 73/97 (75.26%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Lcy12g019940 vs. NCBI nr
Match: KAG6608479.1 (hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.9 bits (372), Expect = 4.5e-32 Identity = 73/97 (75.26%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Lcy12g019940 vs. NCBI nr
Match: KGN55187.1 (hypothetical protein Csa_012728 [Cucumis sativus]) HSP 1 Score: 147.1 bits (370), Expect = 7.7e-32 Identity = 72/97 (74.23%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of Lcy12g019940 vs. NCBI nr
Match: KAA0064378.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa] >TYK20209.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31 Identity = 71/90 (78.89%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Lcy12g019940 vs. NCBI nr
Match: KAG7024250.1 (hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.4 bits (355), Expect = 4.2e-30 Identity = 65/85 (76.47%), Postives = 78/85 (91.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|