Lcy12g019470 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g019470
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein RICE SALT SENSITIVE 3-like
LocationChr12: 46800021 .. 46801156 (+)
RNA-Seq ExpressionLcy12g019470
SyntenyLcy12g019470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGCGAGTAGGTGTGGTAAGTACCATGATTGCTCTTTCCCATTTAATTGTGAAGAGAAAGACGAGTACAGAGCCAGTCGGTTTTCTTTCAGTAAAATGGAAAGTGGCCTTCCCATGCTTAACTGTCTGTTGCAACACACTTTAAGGAGTCTATGTTTGTCTTCAGACTCTTGTAGCTCTTCCTCTTCCAAGTGGGTTTACGCCATTTTCTGGAGGATCCTCCCTAGAAACTTTCCTCCTCCCAAGTAAGAGAACTAAGAACTCAAGTGCCCAAGGAAGTGATGACTGATGGATGACTTGTATTCTGATTCATGAGATATTTTTCCCACATATTTTGCTTTGTTGCAGGTGGGAGTTCGGTGGGAGTGCCCTTGATCGCTCTAAAGGAAACAAGAGGAACTGGTATGTATGGACAAAGTCGATACTTTTGTTAGAATTCTTGACTGCTTATGGAGTTCATGAGTTGGTTTTATTTCAGGATTCTTGTTTGGGAAGATGGATTTTGTGATTTCCATGAATGTGAAAGAGCAGCCAGTGGATGTATTACGGGGAGGTTTGGAGTTGATCTCTTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAAGGGTGAGAGAACTCATACATTCATTTAGATTCTTTGGACAGTTCTAAAGTTTTGTTTGATGAACCTGTTGGATACGTTCATCAGAGAATCTGTATGTCCCTGGTTACAGATTAGTAGGAAAAGTTGGAGCAGATAATAGTCATAAATGGATTTTCAGAGATAGCGCAGCTGAAAGTGATCCGAACCTCATCTCCTCGTGGAACTCATCCATTGAGCCTGTAAGAAAACTTTTTCCTTGTTGAGTGAAAAGAATGTCAGTTCAAATCTATGCATACCAGATTTCTTGACATTTCCACTTTATTCATGTGCAGCAACCTCGAGCATGGGAATCTCAATTTAAATCAGGAATTCAGGTTACTATTCTACAAACTTAGCTTGGTGTAAGCAAAATACTGCAGTATAAGTGATCGCTTCCAGCTTATCAGATACTTGTTTTTGTAGACGATTGCAGTCATTGCTGTACGAGAAGGCGTAGTTCAACTGGGCTCTTTTGATAAGGTTTTGCTTTACTTTTCCTTCTCTTAG

mRNA sequence

ATGCCAGCGAGTAGGTGTGGTAAGTACCATGATTGCTCTTTCCCATTTAATTGTGAAGAGAAAGACGAGTACAGAGCCAGTCGGTTTTCTTTCAGTAAAATGGAAAGTGGCCTTCCCATGCTTAACTGTCTGTTGCAACACACTTTAAGGAGTCTATGTTTGTCTTCAGACTCTTGTAGCTCTTCCTCTTCCAAGTGGGTTTACGCCATTTTCTGGAGGATCCTCCCTAGAAACTTTCCTCCTCCCAAGTGGGAGTTCGGTGGGAGTGCCCTTGATCGCTCTAAAGGAAACAAGAGGAACTGGATTCTTGTTTGGGAAGATGGATTTTGTGATTTCCATGAATGTGAAAGAGCAGCCAGTGGATGTATTACGGGGAGGTTTGGAGTTGATCTCTTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAAGGATTAGTAGGAAAAGTTGGAGCAGATAATAGTCATAAATGGATTTTCAGAGATAGCGCAGCTGAAAGTGATCCGAACCTCATCTCCTCGTGGAACTCATCCATTGAGCCTCAACCTCGAGCATGGGAATCTCAATTTAAATCAGGAATTCAGACGATTGCAGTCATTGCTGTACGAGAAGGCGTAGTTCAACTGGGCTCTTTTGATAAGGTTTTGCTTTACTTTTCCTTCTCTTAG

Coding sequence (CDS)

ATGCCAGCGAGTAGGTGTGGTAAGTACCATGATTGCTCTTTCCCATTTAATTGTGAAGAGAAAGACGAGTACAGAGCCAGTCGGTTTTCTTTCAGTAAAATGGAAAGTGGCCTTCCCATGCTTAACTGTCTGTTGCAACACACTTTAAGGAGTCTATGTTTGTCTTCAGACTCTTGTAGCTCTTCCTCTTCCAAGTGGGTTTACGCCATTTTCTGGAGGATCCTCCCTAGAAACTTTCCTCCTCCCAAGTGGGAGTTCGGTGGGAGTGCCCTTGATCGCTCTAAAGGAAACAAGAGGAACTGGATTCTTGTTTGGGAAGATGGATTTTGTGATTTCCATGAATGTGAAAGAGCAGCCAGTGGATGTATTACGGGGAGGTTTGGAGTTGATCTCTTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAAGGATTAGTAGGAAAAGTTGGAGCAGATAATAGTCATAAATGGATTTTCAGAGATAGCGCAGCTGAAAGTGATCCGAACCTCATCTCCTCGTGGAACTCATCCATTGAGCCTCAACCTCGAGCATGGGAATCTCAATTTAAATCAGGAATTCAGACGATTGCAGTCATTGCTGTACGAGAAGGCGTAGTTCAACTGGGCTCTTTTGATAAGGTTTTGCTTTACTTTTCCTTCTCTTAG

Protein sequence

MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAASGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKVLLYFSFS
Homology
BLAST of Lcy12g019470 vs. ExPASy Swiss-Prot
Match: K4PW38 (Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RSS3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-27
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 0

Query: 45  LQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILV 104
           L   LR++CL+SD        W Y++FW I PR    P+   G     +   +  + +L+
Sbjct: 31  LHEALRNVCLNSD--------WTYSVFWTIRPR----PRCRGGNGC--KVGDDNGSLMLM 90

Query: 105 WEDGFCDFHECERAASGCITGRFGVD----LFFKMSHEVYSYGEGLVGKVGADNSHKWIF 164
           WEDGFC     E     C+    G D     F KMS ++Y+YGEGL+GKV +D  HKW+F
Sbjct: 91  WEDGFCRPRVAE-----CLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVF 150

Query: 165 RDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGS 212
           ++  +E +PN+ + W SS +  P  W  QF SGIQTIAVI    G++QLGS
Sbjct: 151 KE-PSECEPNIANYWQSSFDALPPEWTDQFASGIQTIAVIQAGHGLLQLGS 181

BLAST of Lcy12g019470 vs. ExPASy Swiss-Prot
Match: P0C7P8 (Transcription factor EMB1444 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 59/176 (33.52%), Postives = 78/176 (44.32%), Query Frame = 0

Query: 45  LQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILV 104
           LQ  LRS+C ++D        W YA+FW++   N   P                   +L 
Sbjct: 5   LQQILRSICSNTD--------WNYAVFWKL---NHHSP------------------MVLT 64

Query: 105 WEDGFCDFHECERAASGCITGRFGVD----LFFKMSHEVYSYGEGLVGKVGADNSHKWIF 164
            ED +C  HE          GR   D       KMS+ V+S GEG+VG+V     H+WIF
Sbjct: 65  LEDVYCVNHERGLMPESLHGGRHAHDPLGLAVAKMSYHVHSLGEGIVGQVAISGQHQWIF 124

Query: 165 RDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVRE-GVVQLGSFDKV 216
            +   +S   L              WESQ  +GI+TI ++AV   GVVQLGS  KV
Sbjct: 125 SEYLNDSHSTL---------QVHNGWESQISAGIKTILIVAVGSCGVVQLGSLCKV 142

BLAST of Lcy12g019470 vs. ExPASy Swiss-Prot
Match: Q58G01 (Transcription factor bHLH155 OS=Arabidopsis thaliana OX=3702 GN=BHLH155 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 0

Query: 46  QHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVW 105
           Q  L+S C ++D        W YA+FW++  R          GS +          +L  
Sbjct: 6   QEILKSFCFNTD--------WDYAVFWQLNHR----------GSRM----------VLTL 65

Query: 106 EDGFCDFHECERAASGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAA 165
           ED + D H      +    G        KMS+ VYS GEG+VG+V     H+W+F     
Sbjct: 66  EDAYYDHHGTNMHGAHDPLGL----AVAKMSYHVYSLGEGIVGQVAVSGEHQWVF----- 125

Query: 166 ESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVRE-GVVQLGSFDKV 216
              P   ++ NS+ E     WESQ  +GI+TI V+AV   GVVQLGS  KV
Sbjct: 126 ---PENYNNCNSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135

BLAST of Lcy12g019470 vs. ExPASy TrEMBL
Match: A0A1S3BTL6 (transcription factor LHW-like OS=Cucumis melo OX=3656 GN=LOC103493571 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.4e-122
Identity = 206/215 (95.81%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHEC+RAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECQRAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKW+FRD+A ESDPNLISSWNSSIE
Sbjct: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFRDNATESDPNLISSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQF+SGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFQSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. ExPASy TrEMBL
Match: A0A5D3D9D5 (Transcription factor LHW-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003070 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.4e-122
Identity = 206/215 (95.81%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHEC+RAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECQRAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKW+FRD+A ESDPNLISSWNSSIE
Sbjct: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFRDNATESDPNLISSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQF+SGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFQSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. ExPASy TrEMBL
Match: A0A0A0L0D2 (bHLH-MYC_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641610 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 6.8e-122
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+R SFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRLSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHEC+RAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECQRAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKW+FRD+  ESDPNLISSWNSSIE
Sbjct: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFRDNTTESDPNLISSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. ExPASy TrEMBL
Match: A0A6J1FEA3 (uncharacterized protein LOC111443287 OS=Cucurbita moschata OX=3662 GN=LOC111443287 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-119
Identity = 202/215 (93.95%), Postives = 209/215 (97.21%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASR  KYHDCS PFN EEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRYSKYHDCSSPFNGEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GC+TGRFGVDLFFKMSHEVYSYGEGLVGKVGA+N+HKW+FRDSA ESDPNL+SSWNSSIE
Sbjct: 121 GCLTGRFGVDLFFKMSHEVYSYGEGLVGKVGAENNHKWVFRDSATESDPNLVSSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. ExPASy TrEMBL
Match: A0A5A7V7T5 (Transcription factor LHW-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001200 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 206/242 (85.12%), Postives = 212/242 (87.60%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNW------------------- 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNW                   
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWYVWAKMITLLDILTAWGVY 120

Query: 121 --------ILVWEDGFCDFHECERAASGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGAD 180
                   ILVWEDGFCDFHEC+RAA GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGAD
Sbjct: 121 ELNWFYNRILVWEDGFCDFHECQRAAGGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGAD 180

Query: 181 NSHKWIFRDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGSFD 216
           NSHKW+FRD+A ESDPNLISSWNSSIEPQPRAWESQF+SGIQTIAVIAVREGVVQLGSFD
Sbjct: 181 NSHKWVFRDNATESDPNLISSWNSSIEPQPRAWESQFQSGIQTIAVIAVREGVVQLGSFD 240

BLAST of Lcy12g019470 vs. NCBI nr
Match: XP_008452590.1 (PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_008452591.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_008452592.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_008452595.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_008452596.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_016901254.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_016901255.1 PREDICTED: transcription factor LHW-like [Cucumis melo] >TYK20175.1 transcription factor LHW-like [Cucumis melo var. makuwa])

HSP 1 Score: 448.7 bits (1153), Expect = 2.8e-122
Identity = 206/215 (95.81%), Postives = 212/215 (98.60%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHEC+RAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECQRAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKW+FRD+A ESDPNLISSWNSSIE
Sbjct: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFRDNATESDPNLISSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQF+SGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFQSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. NCBI nr
Match: XP_011654130.1 (transcription factor LHW [Cucumis sativus] >XP_011654131.1 transcription factor LHW [Cucumis sativus] >XP_031740357.1 transcription factor LHW [Cucumis sativus] >XP_031740358.1 transcription factor LHW [Cucumis sativus] >KGN55228.1 hypothetical protein Csa_012369 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFNCEEKDEYRA+R SFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNCEEKDEYRANRLSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHEC+RAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECQRAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKW+FRD+  ESDPNLISSWNSSIE
Sbjct: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWVFRDNTTESDPNLISSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. NCBI nr
Match: KAG6591397.1 (Protein RICE SALT SENSITIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.1 bits (1141), Expect = 7.0e-121
Identity = 204/215 (94.88%), Postives = 211/215 (98.14%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFN EEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNGEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GC+TGRFGVDLFFKMSHEVYSYGEGLVGKVGA+N+HKW+FRDSA ESDPNL+SSWNSSIE
Sbjct: 121 GCLTGRFGVDLFFKMSHEVYSYGEGLVGKVGAENNHKWVFRDSATESDPNLVSSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. NCBI nr
Match: XP_023534816.1 (uncharacterized protein LOC111796446 [Cucurbita pepo subsp. pepo] >XP_023534817.1 uncharacterized protein LOC111796446 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.0 bits (1138), Expect = 1.6e-120
Identity = 203/215 (94.42%), Postives = 211/215 (98.14%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASRC KYHDCSFPFN EEKD+YRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRCSKYHDCSFPFNGEEKDQYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GC+TGRFGVDLFFKMSHEVYSYGEGLVGKVGA+N+HKW+FRDSA ESDPNL+SSWNSSIE
Sbjct: 121 GCLTGRFGVDLFFKMSHEVYSYGEGLVGKVGAENNHKWVFRDSATESDPNLVSSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. NCBI nr
Match: XP_022936813.1 (uncharacterized protein LOC111443287 [Cucurbita moschata])

HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118
Identity = 202/215 (93.95%), Postives = 209/215 (97.21%), Query Frame = 0

Query: 1   MPASRCGKYHDCSFPFNCEEKDEYRASRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60
           MPASR  KYHDCS PFN EEKDEYRA+RFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS
Sbjct: 1   MPASRYSKYHDCSSPFNGEEKDEYRANRFSFSKMESGLPMLNCLLQHTLRSLCLSSDSCS 60

Query: 61  SSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAS 120
           S+SSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAA 
Sbjct: 61  STSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVWEDGFCDFHECERAAG 120

Query: 121 GCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIE 180
           GC+TGRFGVDLFFKMSHEVYSYGEGLVGKVGA+N+HKW+FRDSA ESDPNL+SSWNSSIE
Sbjct: 121 GCLTGRFGVDLFFKMSHEVYSYGEGLVGKVGAENNHKWVFRDSATESDPNLVSSWNSSIE 180

Query: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 216
           PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV
Sbjct: 181 PQPRAWESQFKSGIQTIAVIAVREGVVQLGSFDKV 215

BLAST of Lcy12g019470 vs. TAIR 10
Match: AT1G60060.1 (Serine/threonine-protein kinase WNK (With No Lysine)-related )

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-55
Identity = 104/196 (53.06%), Postives = 139/196 (70.92%), Query Frame = 0

Query: 44  LLQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWIL 103
           LLQHTLRSLC+        +S+WVYA+FWRILPRN+PPPKW+ G  A DRS+GN+RNWIL
Sbjct: 13  LLQHTLRSLCI------HENSQWVYAVFWRILPRNYPPPKWD-GQGAYDRSRGNRRNWIL 72

Query: 104 VWEDGFCDF-------HECERAASGCITGRFG-----------VDLFFKMSHEVYSYGEG 163
           VWEDGFC+F          E +  G  +  +G            +LFFKMSHE+Y+YGEG
Sbjct: 73  VWEDGFCNFAASAAEMSSGEGSGGGGGSAAYGNSDFQQYQGLQPELFFKMSHEIYNYGEG 132

Query: 164 LVGKVGADNSHKWIFRDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREG 222
           L+GKV AD+SHKWI+++   + + N +S+W++S +  PR WE+QF+SGI+TIA+I+VREG
Sbjct: 133 LIGKVAADHSHKWIYKE-PNDQEINFLSAWHNSADSYPRTWEAQFQSGIKTIALISVREG 192

BLAST of Lcy12g019470 vs. TAIR 10
Match: AT5G53900.2 (Serine/threonine-protein kinase WNK (With No Lysine)-related )

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-29
Identity = 72/172 (41.86%), Postives = 97/172 (56.40%), Query Frame = 0

Query: 45  LQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFG-GSALDRSKGNKRNWIL 104
           L   LRS+C +SD        W+Y++FW I PR    P+   G G  +    G   + +L
Sbjct: 21  LHEALRSVCFNSD--------WIYSVFWTIRPR----PRVRGGNGCKIGDESG---SLML 80

Query: 105 VWEDGFCDFHECERAASGCITGRFGVDL----FFKMSHEVYSYGEGLVGKVGADNSHKWI 164
           +WEDGFC     E             DL    F KMS ++Y+YGEGL+GKV +D  HKW+
Sbjct: 81  MWEDGFCGGGRSEDLCLETDIEGHEEDLVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWV 140

Query: 165 FRDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGS 212
           F++  +ES+PNL + W SS +  P  W  QF+SGIQTIAVI    G++QLGS
Sbjct: 141 FKE-PSESEPNLANYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGS 176

BLAST of Lcy12g019470 vs. TAIR 10
Match: AT3G15240.2 (Serine/threonine-protein kinase WNK (With No Lysine)-related )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 0

Query: 45  LQHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILV 104
           L   LR++CL++D        W Y++FW I PR    P+   GG+       N  + +L+
Sbjct: 34  LHDALRTVCLNTD--------WTYSVFWSIRPR----PRVRGGGNGCKVGDDN-GSLMLM 93

Query: 105 WEDGFCDFHECERAASGCITGRFGVD----LFFKMSHEVYSYGEGLVGKVGADNSHKWIF 164
           WEDG+C          GC     G D     F KMS ++Y+YGEGL+GKV +D  HKW+F
Sbjct: 94  WEDGYC---RGRGGTEGCYGDMEGEDPVRKSFSKMSIQLYNYGEGLMGKVASDKCHKWVF 153

Query: 165 RDSAAESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVREGVVQLGS 212
           ++   ES+ N  S W SS +  P  W  QF+SGI+TIAVI    G++QLGS
Sbjct: 154 KEQ-TESESNASSYWQSSFDAIPSEWNDQFESGIRTIAVIQAGHGLLQLGS 187

BLAST of Lcy12g019470 vs. TAIR 10
Match: AT2G31280.1 (conserved peptide upstream open reading frame 7 )

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 0

Query: 46  QHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVW 105
           Q  L+S C ++D        W YA+FW++  R          GS +          +L  
Sbjct: 6   QEILKSFCFNTD--------WDYAVFWQLNHR----------GSRM----------VLTL 65

Query: 106 EDGFCDFHECERAASGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAA 165
           ED + D H      +    G        KMS+ VYS GEG+VG+V     H+W+F     
Sbjct: 66  EDAYYDHHGTNMHGAHDPLGL----AVAKMSYHVYSLGEGIVGQVAVSGEHQWVF----- 125

Query: 166 ESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVRE-GVVQLGSFDKV 216
              P   ++ NS+ E     WESQ  +GI+TI V+AV   GVVQLGS  KV
Sbjct: 126 ---PENYNNCNSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135

BLAST of Lcy12g019470 vs. TAIR 10
Match: AT2G31280.3 (conserved peptide upstream open reading frame 7 )

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 0

Query: 46  QHTLRSLCLSSDSCSSSSSKWVYAIFWRILPRNFPPPKWEFGGSALDRSKGNKRNWILVW 105
           Q  L+S C ++D        W YA+FW++  R          GS +          +L  
Sbjct: 6   QEILKSFCFNTD--------WDYAVFWQLNHR----------GSRM----------VLTL 65

Query: 106 EDGFCDFHECERAASGCITGRFGVDLFFKMSHEVYSYGEGLVGKVGADNSHKWIFRDSAA 165
           ED + D H      +    G        KMS+ VYS GEG+VG+V     H+W+F     
Sbjct: 66  EDAYYDHHGTNMHGAHDPLGL----AVAKMSYHVYSLGEGIVGQVAVSGEHQWVF----- 125

Query: 166 ESDPNLISSWNSSIEPQPRAWESQFKSGIQTIAVIAVRE-GVVQLGSFDKV 216
              P   ++ NS+ E     WESQ  +GI+TI V+AV   GVVQLGS  KV
Sbjct: 126 ---PENYNNCNSAFEFH-NVWESQISAGIKTILVVAVGPCGVVQLGSLCKV 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
K4PW383.6e-2740.35Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RSS3 P... [more]
P0C7P83.5e-1433.52Transcription factor EMB1444 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=... [more]
Q58G014.5e-1433.92Transcription factor bHLH155 OS=Arabidopsis thaliana OX=3702 GN=BHLH155 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A1S3BTL61.4e-12295.81transcription factor LHW-like OS=Cucumis melo OX=3656 GN=LOC103493571 PE=4 SV=1[more]
A0A5D3D9D51.4e-12295.81Transcription factor LHW-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A0A0L0D26.8e-12295.35bHLH-MYC_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641610 ... [more]
A0A6J1FEA35.4e-11993.95uncharacterized protein LOC111443287 OS=Cucurbita moschata OX=3662 GN=LOC1114432... [more]
A0A5A7V7T53.5e-11885.12Transcription factor LHW-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
Match NameE-valueIdentityDescription
XP_008452590.12.8e-12295.81PREDICTED: transcription factor LHW-like [Cucumis melo] >XP_008452591.1 PREDICTE... [more]
XP_011654130.11.4e-12195.35transcription factor LHW [Cucumis sativus] >XP_011654131.1 transcription factor ... [more]
KAG6591397.17.0e-12194.88Protein RICE SALT SENSITIVE 3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023534816.11.6e-12094.42uncharacterized protein LOC111796446 [Cucurbita pepo subsp. pepo] >XP_023534817.... [more]
XP_022936813.11.1e-11893.95uncharacterized protein LOC111443287 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G60060.13.2e-5553.06Serine/threonine-protein kinase WNK (With No Lysine)-related [more]
AT5G53900.23.9e-2941.86Serine/threonine-protein kinase WNK (With No Lysine)-related [more]
AT3G15240.21.9e-2840.35Serine/threonine-protein kinase WNK (With No Lysine)-related [more]
AT2G31280.13.2e-1533.92conserved peptide upstream open reading frame 7 [more]
AT2G31280.33.2e-1533.92conserved peptide upstream open reading frame 7 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025610Transcription factor MYC/MYB N-terminalPFAMPF14215bHLH-MYC_Ncoord: 45..215
e-value: 6.4E-26
score: 91.7
NoneNo IPR availablePANTHERPTHR46633:SF6TRANSCRIPTION FACTOR MYC/MYB-RELATEDcoord: 34..216
NoneNo IPR availablePANTHERPTHR46633TRANSCRIPTION FACTOR MYC/MYB-RELATEDcoord: 34..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g019470.1Lcy12g019470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane