Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCTCTCTCCCCCCCACCGTTCTGCAGCCATGATCAAGACACTCAATCCTTACAACTCCACCGAGAAGACGGCCGAGATCATGTCCAGATACCGGCCCATTGCCCCCAAGCCCGACCTCCCCTCTGCCTTTCCCTCCACTGACCACTCTCACAACATTCGTCACTCCACGTTTCTTCGTAATGTCTGGCCCCAGTTGCAGGCCAGACCCACCAGAACCCGCAAGCGAGGTCGTGCCACCGCCATTTCGCCTCACCCCTTGAAGCGACCCAGGACCGCGCCTTCCGCTTTGTCTCTCCAGGCCTTCTCCACTGCTTCTTTACTTCCTCACCTTACTAATGCTGGCTTTGATGATGTGCCTGCCAATTCTAATCTCGTCACGCTTCCGCTTCTTCCGTGTGCGCCGCCGTCTTCTGTTTCTGAGGAAACCAGTGGGGGGTCTGAGATTAATTTCATCAAGTCGTTTGATGAAGAGAATAGCGTTGTGGTTTCTGAAATTCCTGAAGAGAAGGATCTGTTGCAGCAGCTTCAAGGTCCGGTGTCCACCTGCAATGTTATAACGCCGCACCCTGTTCGGCCTGTCGGTTCGATCATTCGCGTTGGGTGCATCAACGAAGCCCAAACCTCGAGCCACTCCAGCATTCCGCAGGCGCCGAAGAAACCGGATGAGGTGGAGAAGGAGGTCGAATCGGAGGTGTTGCCGGCGGTCATATCGGACTCGAACAACAGAGTGAGAATGGCGAATTCGGCCTACAAGGAGATGGTCGGGCAGCCAGAGTGCCCGTGGCTGGACTCGATGGTGACCGGAGACGAACGGCTCAAAGGCAGAAGAATCGGCGGCGAAGTGATGCTCCACCTGTCCGACGCGGCGGCGGTGCCCCATTCCTCAAATGGGTTCTCTTGTTGGGTGAGGATCGAATGGGGAAACAGTGACGGAAAGAAAAATTCCATCACCGCCTTCTGCGATGTCATCAAACTTTCTTGCGTGTCTCGAGACTACCTCTTCACGTGGAGGTTCCACACTCAAACCAGAGATAATAATGACGCTTCCAATCCCATTTGTATCAATGTTTGATAATCAAAT
mRNA sequence
CATCTCTCTCCCCCCCACCGTTCTGCAGCCATGATCAAGACACTCAATCCTTACAACTCCACCGAGAAGACGGCCGAGATCATGTCCAGATACCGGCCCATTGCCCCCAAGCCCGACCTCCCCTCTGCCTTTCCCTCCACTGACCACTCTCACAACATTCGTCACTCCACGTTTCTTCGTAATGTCTGGCCCCAGTTGCAGGCCAGACCCACCAGAACCCGCAAGCGAGGTCGTGCCACCGCCATTTCGCCTCACCCCTTGAAGCGACCCAGGACCGCGCCTTCCGCTTTGTCTCTCCAGGCCTTCTCCACTGCTTCTTTACTTCCTCACCTTACTAATGCTGGCTTTGATGATGTGCCTGCCAATTCTAATCTCGTCACGCTTCCGCTTCTTCCGTGTGCGCCGCCGTCTTCTGTTTCTGAGGAAACCAGTGGGGGGTCTGAGATTAATTTCATCAAGTCGTTTGATGAAGAGAATAGCGTTGTGGTTTCTGAAATTCCTGAAGAGAAGGATCTGTTGCAGCAGCTTCAAGGTCCGGTGTCCACCTGCAATGTTATAACGCCGCACCCTGTTCGGCCTGTCGGTTCGATCATTCGCGTTGGGTGCATCAACGAAGCCCAAACCTCGAGCCACTCCAGCATTCCGCAGGCGCCGAAGAAACCGGATGAGGTGGAGAAGGAGGTCGAATCGGAGGTGTTGCCGGCGGTCATATCGGACTCGAACAACAGAGTGAGAATGGCGAATTCGGCCTACAAGGAGATGGTCGGGCAGCCAGAGTGCCCGTGGCTGGACTCGATGGTGACCGGAGACGAACGGCTCAAAGGCAGAAGAATCGGCGGCGAAGTGATGCTCCACCTGTCCGACGCGGCGGCGGTGCCCCATTCCTCAAATGGGTTCTCTTGTTGGGTGAGGATCGAATGGGGAAACAGTGACGGAAAGAAAAATTCCATCACCGCCTTCTGCGATGTCATCAAACTTTCTTGCGTGTCTCGAGACTACCTCTTCACGTGGAGGTTCCACACTCAAACCAGAGATAATAATGACGCTTCCAATCCCATTTGTATCAATGTTTGATAATCAAAT
Coding sequence (CDS)
ATGATCAAGACACTCAATCCTTACAACTCCACCGAGAAGACGGCCGAGATCATGTCCAGATACCGGCCCATTGCCCCCAAGCCCGACCTCCCCTCTGCCTTTCCCTCCACTGACCACTCTCACAACATTCGTCACTCCACGTTTCTTCGTAATGTCTGGCCCCAGTTGCAGGCCAGACCCACCAGAACCCGCAAGCGAGGTCGTGCCACCGCCATTTCGCCTCACCCCTTGAAGCGACCCAGGACCGCGCCTTCCGCTTTGTCTCTCCAGGCCTTCTCCACTGCTTCTTTACTTCCTCACCTTACTAATGCTGGCTTTGATGATGTGCCTGCCAATTCTAATCTCGTCACGCTTCCGCTTCTTCCGTGTGCGCCGCCGTCTTCTGTTTCTGAGGAAACCAGTGGGGGGTCTGAGATTAATTTCATCAAGTCGTTTGATGAAGAGAATAGCGTTGTGGTTTCTGAAATTCCTGAAGAGAAGGATCTGTTGCAGCAGCTTCAAGGTCCGGTGTCCACCTGCAATGTTATAACGCCGCACCCTGTTCGGCCTGTCGGTTCGATCATTCGCGTTGGGTGCATCAACGAAGCCCAAACCTCGAGCCACTCCAGCATTCCGCAGGCGCCGAAGAAACCGGATGAGGTGGAGAAGGAGGTCGAATCGGAGGTGTTGCCGGCGGTCATATCGGACTCGAACAACAGAGTGAGAATGGCGAATTCGGCCTACAAGGAGATGGTCGGGCAGCCAGAGTGCCCGTGGCTGGACTCGATGGTGACCGGAGACGAACGGCTCAAAGGCAGAAGAATCGGCGGCGAAGTGATGCTCCACCTGTCCGACGCGGCGGCGGTGCCCCATTCCTCAAATGGGTTCTCTTGTTGGGTGAGGATCGAATGGGGAAACAGTGACGGAAAGAAAAATTCCATCACCGCCTTCTGCGATGTCATCAAACTTTCTTGCGTGTCTCGAGACTACCTCTTCACGTGGAGGTTCCACACTCAAACCAGAGATAATAATGACGCTTCCAATCCCATTTGTATCAATGTTTGA
Protein sequence
MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARPTRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLTNAGFDDVPANSNLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEENSVVVSEIPEEKDLLQQLQGPVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKGRRIGGEVMLHLSDAAAVPHSSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTRDNNDASNPICINV
Homology
BLAST of Lcy12g018980 vs. ExPASy TrEMBL
Match:
A0A6J1FNF7 (uncharacterized protein LOC111445851 OS=Cucurbita moschata OX=3662 GN=LOC111445851 PE=4 SV=1)
HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154
Identity = 284/361 (78.67%), Postives = 305/361 (84.49%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF SHNI HS FL NVWP LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----QSHNIPHSAFLTNVWPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T ISPHPLKR RT PSALSL AFS++SLLP L+ AGF+D S
Sbjct: 61 TRTRKRGRSTPISPHPLKRSRTTPSALSLHAFSSSSLLPRLSIAALNGGAAGFEDTHVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS VSEIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVSEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITPHPVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVEKEVESEVLPAVIS
Sbjct: 181 PVSTCNVITPHPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEKEVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDE-RLKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDE RLKGRRIGGEVML LSDAAAVPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERRLKGRRIGGEVMLQLSDAAAVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSC SRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCASRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. ExPASy TrEMBL
Match:
A0A6J1J4S8 (uncharacterized protein LOC111481308 OS=Cucurbita maxima OX=3661 GN=LOC111481308 PE=4 SV=1)
HSP 1 Score: 554.7 bits (1428), Expect = 2.8e-154
Identity = 284/361 (78.67%), Postives = 305/361 (84.49%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF HSHNI HS FL NVWP LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----HSHNIPHSAFLTNVWPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T IS HPLKR RT PSA SL AFS+ASLLP L+ AGF+D P S
Sbjct: 61 TRTRKRGRSTPISLHPLKRSRTTPSASSLHAFSSASLLPRLSIAALDGGAAGFEDTPVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS V EIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVCEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITP+PVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVEKEVESEVLPAVIS
Sbjct: 181 PVSTCNVITPYPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEKEVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDE-RLKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDE RLKGRRIGGEVML LSDAAAVPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERRLKGRRIGGEVMLQLSDAAAVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSCVSRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCVSRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. ExPASy TrEMBL
Match:
A0A5D3D9G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002650 PE=4 SV=1)
HSP 1 Score: 516.9 bits (1330), Expect = 6.4e-143
Identity = 283/373 (75.87%), Postives = 302/373 (80.97%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHS-HNIRH--------STFLRN 60
MIKTL P+ ST+KTAEIMSRYRPIAPKP+ P FP++DHS +NI H S+FLRN
Sbjct: 1 MIKTLPPFPSTDKTAEIMSRYRPIAPKPESP--FPTSDHSLNNIPHSSSSSSSSSSFLRN 60
Query: 61 VWPQLQARPTRTRKRGRATAISPHPLKRPR-TAPSALSLQAFSTASLLPHLT----NAGF 120
VWPQLQARPTRTRKR R ISPH LKR R T P SL +SLLPHL+ N+GF
Sbjct: 61 VWPQLQARPTRTRKRSRPPPISPHSLKRARITPPPNFSLHHPFPSSLLPHLSLPSINSGF 120
Query: 121 DDVPANSNLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-------NSVVVSEIPEE 180
D +NSNLVTLPLLP S ET+ SEINFIKSFDEE +S VVSEIP+E
Sbjct: 121 HDSSSNSNLVTLPLLPSV---SDETETTPVSEINFIKSFDEEKGVEFNVDSAVVSEIPQE 180
Query: 181 KDLLQQLQGPVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHS-SIPQAPKKPDEVEKEV 240
KDLLQQLQ PVS NVITPHPVRPVGS IRVGCINEAQ HS + PQ PKKPDEVEKEV
Sbjct: 181 KDLLQQLQCPVSVSNVITPHPVRPVGSSIRVGCINEAQNPVHSNNTPQLPKKPDEVEKEV 240
Query: 241 ESEVLPAVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKGRRIGGEVMLHLSD 300
ESEVLPAVISDSNNRVRMANSAYKEMVGQPEC WLDSMVTGDERLKGRRIGGEVMLHLSD
Sbjct: 241 ESEVLPAVISDSNNRVRMANSAYKEMVGQPECLWLDSMVTGDERLKGRRIGGEVMLHLSD 300
Query: 301 AAAVPHSSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTR---- 348
AAAVPHSSNGFSCWVRIEWGNSDGKKNS+TAFCDVIKLSCVSRDYLFTWRFHTQT+
Sbjct: 301 AAAVPHSSNGFSCWVRIEWGNSDGKKNSVTAFCDVIKLSCVSRDYLFTWRFHTQTKNNHN 360
BLAST of Lcy12g018980 vs. ExPASy TrEMBL
Match:
A0A1S3BUA6 (uncharacterized protein LOC103493608 OS=Cucumis melo OX=3656 GN=LOC103493608 PE=4 SV=1)
HSP 1 Score: 516.9 bits (1330), Expect = 6.4e-143
Identity = 283/373 (75.87%), Postives = 302/373 (80.97%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHS-HNIRH--------STFLRN 60
MIKTL P+ ST+KTAEIMSRYRPIAPKP+ P FP++DHS +NI H S+FLRN
Sbjct: 1 MIKTLPPFPSTDKTAEIMSRYRPIAPKPESP--FPTSDHSLNNIPHSSSSSSSSSSFLRN 60
Query: 61 VWPQLQARPTRTRKRGRATAISPHPLKRPR-TAPSALSLQAFSTASLLPHLT----NAGF 120
VWPQLQARPTRTRKR R ISPH LKR R T P SL +SLLPHL+ N+GF
Sbjct: 61 VWPQLQARPTRTRKRSRPPPISPHSLKRARITPPPNFSLHHPFPSSLLPHLSLPSINSGF 120
Query: 121 DDVPANSNLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-------NSVVVSEIPEE 180
D +NSNLVTLPLLP S ET+ SEINFIKSFDEE +S VVSEIP+E
Sbjct: 121 HDSSSNSNLVTLPLLPSV---SDETETTPVSEINFIKSFDEEKGVEFNVDSAVVSEIPQE 180
Query: 181 KDLLQQLQGPVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHS-SIPQAPKKPDEVEKEV 240
KDLLQQLQ PVS NVITPHPVRPVGS IRVGCINEAQ HS + PQ PKKPDEVEKEV
Sbjct: 181 KDLLQQLQCPVSVSNVITPHPVRPVGSSIRVGCINEAQNPVHSNNTPQLPKKPDEVEKEV 240
Query: 241 ESEVLPAVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKGRRIGGEVMLHLSD 300
ESEVLPAVISDSNNRVRMANSAYKEMVGQPEC WLDSMVTGDERLKGRRIGGEVMLHLSD
Sbjct: 241 ESEVLPAVISDSNNRVRMANSAYKEMVGQPECLWLDSMVTGDERLKGRRIGGEVMLHLSD 300
Query: 301 AAAVPHSSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTR---- 348
AAAVPHSSNGFSCWVRIEWGNSDGKKNS+TAFCDVIKLSCVSRDYLFTWRFHTQT+
Sbjct: 301 AAAVPHSSNGFSCWVRIEWGNSDGKKNSVTAFCDVIKLSCVSRDYLFTWRFHTQTKNNHN 360
BLAST of Lcy12g018980 vs. ExPASy TrEMBL
Match:
A0A0A0L0I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643080 PE=4 SV=1)
HSP 1 Score: 511.1 bits (1315), Expect = 3.5e-141
Identity = 284/375 (75.73%), Postives = 303/375 (80.80%), Query Frame = 0
Query: 1 MIKTL-NPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHS-HNIRH-------STFLRN 60
MIKTL P+ ST+KTAEIMSRYRPIAPKP+ P FP++DHS +NI H S+FLRN
Sbjct: 58 MIKTLPPPFPSTDKTAEIMSRYRPIAPKPESP--FPTSDHSLNNIPHSSSSSSSSSFLRN 117
Query: 61 VWPQLQARPTRTRKRGRATAISPHPLKRPRTAPS---ALSLQAFSTASLLPHLT----NA 120
VWPQLQARPTRTRKR R ISPH LKR R PS +L FS +SLLPHL+ N+
Sbjct: 118 VWPQLQARPTRTRKRSRPPPISPHSLKRTRITPSPNFSLHHHPFS-SSLLPHLSLPSINS 177
Query: 121 GFDDVPANSNLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEENSV-------VVSEIP 180
GF D +NSNLVTLPLLP S +E T+ SEINFIKSFDEE V VVSEIP
Sbjct: 178 GFRDSSSNSNLVTLPLLPSV--SDETETTTPVSEINFIKSFDEEKGVEFSVDSSVVSEIP 237
Query: 181 EEKDLLQQLQGPVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHS-SIPQAPKKPDEVEK 240
+EKDLLQQLQ PVS NVITPHPVRPVGS IRVGCINEAQ HS + PQ PKKPDEVEK
Sbjct: 238 QEKDLLQQLQCPVSISNVITPHPVRPVGSSIRVGCINEAQNPVHSNNTPQLPKKPDEVEK 297
Query: 241 EVESEVLPAVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKGRRIGGEVMLHL 300
EVESEVLPAVISDSNNRVRMANSAYKEMVGQPEC WLDSMVTGDERLKGRRIGGEVMLHL
Sbjct: 298 EVESEVLPAVISDSNNRVRMANSAYKEMVGQPECLWLDSMVTGDERLKGRRIGGEVMLHL 357
Query: 301 SDAAAVPHSSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTR-- 348
SDAAAVPHSSNGFSCWVRIEWGNSDGKKNS+TAFCDVIKLSCVSRDYLFTWRFHTQTR
Sbjct: 358 SDAAAVPHSSNGFSCWVRIEWGNSDGKKNSVTAFCDVIKLSCVSRDYLFTWRFHTQTRNN 417
BLAST of Lcy12g018980 vs. NCBI nr
Match:
KAG6591427.1 (hypothetical protein SDJN03_13773, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024308.1 hypothetical protein SDJN02_13122, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 569.3 bits (1466), Expect = 2.3e-158
Identity = 292/363 (80.44%), Postives = 309/363 (85.12%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNI--RHSTFLRNVWPQLQA 60
MIKTL P+ ST+KTAEIMSRYRPIAPKP+ PS FP+TDHSHNI STFLRNVWP LQA
Sbjct: 1 MIKTLTPFTSTDKTAEIMSRYRPIAPKPEPPSPFPTTDHSHNIPPSSSTFLRNVWPHLQA 60
Query: 61 RPTRTRKRGRATAISPHPLKRPR-TAPSALSLQAFSTASLLPHLT------NAGFDDVPA 120
RPTRTRKR RA ISPH LKR R T PS S+ F + SLLP L+ GFDD PA
Sbjct: 61 RPTRTRKRPRAAPISPHALKRSRATTPSTFSIHPFRSGSLLPQLSVVSVNGAGGFDDAPA 120
Query: 121 NSNLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEENSV------VVSEIPEEKDLLQQ 180
NSNLVTLPLLPCAPPSSVS+ETS GS+ NF+ SFDEEN + VV EIPEEKDLL+Q
Sbjct: 121 NSNLVTLPLLPCAPPSSVSDETSAGSDFNFVNSFDEENGMEFNACAVVPEIPEEKDLLRQ 180
Query: 181 LQGPVSTCNVITPHPVRPVGSIIRVGCINEAQTSSH-SSIPQAPKKPDEVEKEVESEVLP 240
LQGPVSTCNVITPHPVRPVGS IRVGCINE QT S SS PQAPKKPDEVEKEVESEVLP
Sbjct: 181 LQGPVSTCNVITPHPVRPVGSSIRVGCINETQTPSRSSSTPQAPKKPDEVEKEVESEVLP 240
Query: 241 AVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKGRRIGGEVMLHLSDAAAVPH 300
AVISDSNN+VRMANSAYKEM+GQPEC WLDSMVTGDERLKGRRIGGEVMLHLSDAAAV H
Sbjct: 241 AVISDSNNKVRMANSAYKEMIGQPECLWLDSMVTGDERLKGRRIGGEVMLHLSDAAAVSH 300
Query: 301 SSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTRDNNDASNPIC 348
SSNGFSCWVRIEWGNS+GKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTR+ +AS PIC
Sbjct: 301 SSNGFSCWVRIEWGNSNGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQTREKTNASKPIC 360
BLAST of Lcy12g018980 vs. NCBI nr
Match:
KAG7037758.1 (hypothetical protein SDJN02_01389, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 557.4 bits (1435), Expect = 8.9e-155
Identity = 285/361 (78.95%), Postives = 306/361 (84.76%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF SHNI HS FL NVWP LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----QSHNIPHSAFLTNVWPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T+ISPHPLKR RT PSALSL AFS+ASLLP L+ AGF+D S
Sbjct: 61 TRTRKRGRSTSISPHPLKRSRTTPSALSLHAFSSASLLPRLSIAALNGGAAGFEDTHVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS VSEIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVSEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITPHPVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVEKEVESEVLPAVIS
Sbjct: 181 PVSTCNVITPHPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEKEVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDE-RLKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDE RLKGRRIGGEVML LSDAA VPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERRLKGRRIGGEVMLQLSDAAEVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSCVSRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCVSRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. NCBI nr
Match:
XP_023524260.1 (uncharacterized protein LOC111788215 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 556.6 bits (1433), Expect = 1.5e-154
Identity = 285/361 (78.95%), Postives = 306/361 (84.76%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF HSHNI HS FL NV P LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----HSHNIPHSAFLTNVSPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T ISPHPLKR RT PSALSL AFS+ASLLP L+ AGF+D P S
Sbjct: 61 TRTRKRGRSTPISPHPLKRSRTTPSALSLHAFSSASLLPRLSIAALNGGAAGFEDTPVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS V EIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVCEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITPHPVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVE+EVESEVLPAVIS
Sbjct: 181 PVSTCNVITPHPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEREVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDER-LKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDER LKGRRIGGEVML LSDAAAVPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERSLKGRRIGGEVMLQLSDAAAVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSCVSRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCVSRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. NCBI nr
Match:
XP_022940133.1 (uncharacterized protein LOC111445851 [Cucurbita moschata])
HSP 1 Score: 555.8 bits (1431), Expect = 2.6e-154
Identity = 284/361 (78.67%), Postives = 305/361 (84.49%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF SHNI HS FL NVWP LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----QSHNIPHSAFLTNVWPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T ISPHPLKR RT PSALSL AFS++SLLP L+ AGF+D S
Sbjct: 61 TRTRKRGRSTPISPHPLKRSRTTPSALSLHAFSSSSLLPRLSIAALNGGAAGFEDTHVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS VSEIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVSEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITPHPVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVEKEVESEVLPAVIS
Sbjct: 181 PVSTCNVITPHPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEKEVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDE-RLKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDE RLKGRRIGGEVML LSDAAAVPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERRLKGRRIGGEVMLQLSDAAAVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSC SRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCASRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. NCBI nr
Match:
KAG6608421.1 (hypothetical protein SDJN03_01763, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 284/361 (78.67%), Postives = 304/361 (84.21%), Query Frame = 0
Query: 1 MIKTLNPYNSTEKTAEIMSRYRPIAPKPDLPSAFPSTDHSHNIRHSTFLRNVWPQLQARP 60
MIKTL PY ST+KTAEIMS+YRPIAPKPD P+AF SHNI HS FL NVWP LQARP
Sbjct: 1 MIKTLPPYTSTDKTAEIMSKYRPIAPKPDSPTAF----QSHNIPHSAFLTNVWPHLQARP 60
Query: 61 TRTRKRGRATAISPHPLKRPRTAPSALSLQAFSTASLLPHLT-------NAGFDDVPANS 120
TRTRKRGR+T ISPHPLKR RT PSALSL FS+ASLLP L+ AGF+D S
Sbjct: 61 TRTRKRGRSTPISPHPLKRSRTTPSALSLHVFSSASLLPRLSIAALNGGAAGFEDTHVGS 120
Query: 121 NLVTLPLLPCAPPSSVSEETSGGSEINFIKSFDEE-----NSVVVSEIPEEKDLLQQLQG 180
NLVTLPLLPC PPSS+SEE GSEINFI SFD+E NS VSEIP+EKDLLQQLQ
Sbjct: 121 NLVTLPLLPCGPPSSISEENCRGSEINFIMSFDDEKGLELNSAAVSEIPKEKDLLQQLQA 180
Query: 181 PVSTCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVIS 240
PVSTCNVITPHPVRPVGSII VGCIN+ QT+SHS+ PQ PK PDEVEKEVESEVLPAVIS
Sbjct: 181 PVSTCNVITPHPVRPVGSIILVGCINKTQTASHSTTPQPPKNPDEVEKEVESEVLPAVIS 240
Query: 241 DSNNRVRMANSAYKEMVGQPECPWLDSMVTGDE-RLKGRRIGGEVMLHLSDAAAVPHSSN 300
DSNN+VRMANSAYKEMVGQPECPWL+SMV GDE RLKGRRIGGEVML LSDAA VPHSSN
Sbjct: 241 DSNNKVRMANSAYKEMVGQPECPWLESMVKGDERRLKGRRIGGEVMLQLSDAAEVPHSSN 300
Query: 301 GFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYLFTWRFHTQ-TRDNNDASNPICIN 348
GFSCWVRI+WGN GKKNSITA+CDV+KLSCVSRDYLFTWRFHTQ T+ NDASNPICIN
Sbjct: 301 GFSCWVRIDWGNGGGKKNSITAYCDVVKLSCVSRDYLFTWRFHTQKTKHINDASNPICIN 357
BLAST of Lcy12g018980 vs. TAIR 10
Match:
AT1G27461.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 287.7 bits (735), Expect = 1.2e-77
Identity = 179/369 (48.51%), Postives = 231/369 (62.60%), Query Frame = 0
Query: 1 MIKTLNPYN-----STEKTAEIMSRYRPIAPKPDLPSA---FPSTDHSHNIRHSTFLRNV 60
MIK LNP++ +T KTAEI+S+YRPIAPKP P PS+ SH I S +LRN+
Sbjct: 1 MIKILNPHSHHSQTTTLKTAEILSKYRPIAPKPGTPRVNDDDPSSSMSHKISQSPYLRNL 60
Query: 61 WPQLQARPTRTRKRGR-ATAISPHPLKRPRTAPSA-----------------LSLQAFST 120
WPQLQARPTRTRKRGR S +KRP+++ + LS QAF T
Sbjct: 61 WPQLQARPTRTRKRGRGGMGPSSLAMKRPKSSCGSSSTSTISTQRVLGPIKTLSFQAF-T 120
Query: 121 ASLLPHLTNAGFD-DVPANSNLVTLPLLPCAPPSS--VSEETSGGSEINFIKSFDEENSV 180
LP+L G+ + +S LVTLPLL C+PPSS + E G I+ K+
Sbjct: 121 HHRLPNLPQVGYGFENGVSSTLVTLPLLQCSPPSSKCMEPEIKGKGVIDLNKT------- 180
Query: 181 VVSEIPEEKDLLQQLQGPV------STCNVITPHPVRPVGSIIRVGCINEAQTSSHSSIP 240
+E+ +E+D L QLQGP+ +T VI+P P+RPV S I V IN S +S
Sbjct: 181 --AEVIQERDFLTQLQGPITTTTTATTSRVISPQPIRPVCSKINVAYINPLTNPSPTS-Q 240
Query: 241 QAPKKPDEVEKEVESEVLPAVISDSNNRVRMANSAYKEMVGQPECPWLDSMVTGDERLKG 300
+ K P EVE++VES+ LP+VI+DSN+RVR+ NSAYKEM+GQPEC WLDSMV +G
Sbjct: 241 TSKKSPREVEEDVESDDLPSVITDSNSRVRLVNSAYKEMMGQPECSWLDSMV------RG 300
Query: 301 RRIGGEVMLHLSDA-AAVPHSSNGFSCWVRIEWGNSDGKKNSITAFCDVIKLSCVSRDYL 334
+RI GEVM++ ++ V +NGFSCWVRI+WG DGK+ + AFCDV KL+C S+DY+
Sbjct: 301 KRICGEVMINFCESKIPVMTENNGFSCWVRIDWGR-DGKEEYMHAFCDVTKLACDSKDYV 351
BLAST of Lcy12g018980 vs. TAIR 10
Match:
AT5G50360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 45.8 bits (107), Expect = 8.1e-05
Identity = 37/145 (25.52%), Postives = 63/145 (43.45%), Query Frame = 0
Query: 184 VGSIIRVGCINEAQTSSHSSIPQAPKKPDEVEKEVESEVLPAVISDSNNRVRMANSAYKE 243
V S++ V C+ E + +E + +E + P ISD RV N +Y+E
Sbjct: 159 VSSLLTVECVTERLMEGEYELGCT---DEERKMNLERDTCPGFISDGLGRVIWTNGSYRE 218
Query: 244 MVGQPECPWLDSMVTGDERLKGRRIGGEVMLHLSDAAAVPHSSNGFSCWVRIEWGNSDGK 303
+V + M V L + + V + + F+C +R+++ D +
Sbjct: 219 LVVGKDHEQCSKM--------------SVWLVMKEKPLVTYRT--FTCRMRLQYTCRDKE 278
Query: 304 KNSITAFCDVIKLSCVSRDYLFTWR 329
+SIT+FCDV ++S D F WR
Sbjct: 279 VSSITSFCDVWRMS----DGGFAWR 280
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FNF7 | 1.2e-154 | 78.67 | uncharacterized protein LOC111445851 OS=Cucurbita moschata OX=3662 GN=LOC1114458... | [more] |
A0A6J1J4S8 | 2.8e-154 | 78.67 | uncharacterized protein LOC111481308 OS=Cucurbita maxima OX=3661 GN=LOC111481308... | [more] |
A0A5D3D9G0 | 6.4e-143 | 75.87 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BUA6 | 6.4e-143 | 75.87 | uncharacterized protein LOC103493608 OS=Cucumis melo OX=3656 GN=LOC103493608 PE=... | [more] |
A0A0A0L0I3 | 3.5e-141 | 75.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643080 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6591427.1 | 2.3e-158 | 80.44 | hypothetical protein SDJN03_13773, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037758.1 | 8.9e-155 | 78.95 | hypothetical protein SDJN02_01389, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023524260.1 | 1.5e-154 | 78.95 | uncharacterized protein LOC111788215 [Cucurbita pepo subsp. pepo] | [more] |
XP_022940133.1 | 2.6e-154 | 78.67 | uncharacterized protein LOC111445851 [Cucurbita moschata] | [more] |
KAG6608421.1 | 4.4e-154 | 78.67 | hypothetical protein SDJN03_01763, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT1G27461.1 | 1.2e-77 | 48.51 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |
AT5G50360.1 | 8.1e-05 | 25.52 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |