Lcy12g018860 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGCTGCCAATAGCTAATATAGATATCTTGTTCTACAGACAATCGGCACTCGATTTCATATTTAAAACACCAGAAATCGCGCAAACCGAAGCATTGATTTTTCAATCGCCATGGGGAATTCACATCCGGTCGAGTTCGATATCGAATTCCTTCAAACGACGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAACTGCAATCGCTTTCGAGCCCTAGCGCAAGCTTGTGCGAGAGGTCGATGTTGAAATTGCCATCGCCGCCGTGCCGGTCGGAGAGTGCTAGGTTGCCGGGCGACTGCAGCGCGGCGATCCCCTATCATCCTCCGCGTTGCATGGCGGAGAGTGAGAGGATCGCTAAGGATTATCTGTGGCTTGAAGCTTGTTCCGGCGACTCTGCATCGTATTTCGGGTGCTGTAAATGGGATGGTTTGAAGGAGAGGGATCCTTTCGTTGAAGCCTACAAGAAATGTACCGACGGCCCGTCGATGAGCCGTCGGCCGATCAGTGGCGGTTCTGCTACAAGTGGTGTTAAACGTCCCAGTATCAGAAGAAGAGTTCTTTTTTCTCTCTCACGTAAGTGCTTTGTGCTACGATTCATTCGTACAAGTACTTTTTTTAATAAAATGTGATTCTTTGGTTTATATAATTTAGGTAATTACAAGTTAAAAGTTACTTTAACTTTTGTATGCTTTGAATTCGATTTTAAGGCCCCGTTTGTCTTTTGTTTTTTGTTTTTGAAAATTAAGTTTATA GGAGCTGCCAATAGCTAATATAGATATCTTGTTCTACAGACAATCGGCACTCGATTTCATATTTAAAACACCAGAAATCGCGCAAACCGAAGCATTGATTTTTCAATCGCCATGGGGAATTCACATCCGGTCGAGTTCGATATCGAATTCCTTCAAACGACGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAACTGCAATCGCTTTCGAGCCCTAGCGCAAGCTTGTGCGAGAGGTCGATGTTGAAATTGCCATCGCCGCCGTGCCGGTCGGAGAGTGCTAGGTTGCCGGGCGACTGCAGCGCGGCGATCCCCTATCATCCTCCGCGTTGCATGGCGGAGAGTGAGAGGATCGCTAAGGATTATCTGTGGCTTGAAGCTTGTTCCGGCGACTCTGCATCGTATTTCGGGTGCTGTAAATGGGATGGTTTGAAGGAGAGGGATCCTTTCGTTGAAGCCTACAAGAAATGTACCGACGGCCCGTCGATGAGCCGTCGGCCGATCAGTGGCGGTTCTGCTACAAGTGGTGTTAAACGTCCCAGTATCAGAAGAAGAGTTCTTTTTTCTCTCTCACGTAAGTGCTTTGTGCTACGATTCATTCGTACAAGTACTTTTTTTAATAAAATGTGATTCTTTGGTTTATATAATTTAGGTAATTACAAGTTAAAAGTTACTTTAACTTTTGTATGCTTTGAATTCGATTTTAAGGCCCCGTTTGTCTTTTGTTTTTTGTTTTTGAAAATTAAGTTTATA ATGGGGAATTCACATCCGGTCGAGTTCGATATCGAATTCCTTCAAACGACGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAACTGCAATCGCTTTCGAGCCCTAGCGCAAGCTTGTGCGAGAGGTCGATGTTGAAATTGCCATCGCCGCCGTGCCGGTCGGAGAGTGCTAGGTTGCCGGGCGACTGCAGCGCGGCGATCCCCTATCATCCTCCGCGTTGCATGGCGGAGAGTGAGAGGATCGCTAAGGATTATCTGTGGCTTGAAGCTTGTTCCGGCGACTCTGCATCGTATTTCGGGTGCTGTAAATGGGATGGTTTGAAGGAGAGGGATCCTTTCGTTGAAGCCTACAAGAAATGTACCGACGGCCCGTCGATGAGCCGTCGGCCGATCAGTGGCGGTTCTGCTACAAGTGGTGTTAAACGTCCCAGTATCAGAAGAAGAGTTCTTTTTTCTCTCTCACGTAAGTGCTTTGTGCTACGATTCATTCGTACAAGTACTTTTTTTAATAAAATGTGA MGNSHPVEFDIEFLQTTTNVPFSWEAKPGVPKLQSLSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSGDSASYFGCCKWDGLKERDPFVEAYKKCTDGPSMSRRPISGGSATSGVKRPSIRRRVLFSLSRKCFVLRFIRTSTFFNKM Homology
BLAST of Lcy12g018860 vs. ExPASy TrEMBL
Match: A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 5.0e-51 Identity = 113/166 (68.07%), Postives = 124/166 (74.70%), Query Frame = 0
BLAST of Lcy12g018860 vs. ExPASy TrEMBL
Match: A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50 Identity = 110/145 (75.86%), Postives = 117/145 (80.69%), Query Frame = 0
BLAST of Lcy12g018860 vs. ExPASy TrEMBL
Match: A0A067LAQ4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.4e-07 Identity = 49/142 (34.51%), Postives = 70/142 (49.30%), Query Frame = 0
BLAST of Lcy12g018860 vs. ExPASy TrEMBL
Match: K7MNJ6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G232800 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.4e-05 Identity = 41/119 (34.45%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of Lcy12g018860 vs. ExPASy TrEMBL
Match: A0A2K1XNQ3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G012900 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 45/143 (31.47%), Postives = 59/143 (41.26%), Query Frame = 0
BLAST of Lcy12g018860 vs. NCBI nr
Match: KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55 Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 0
BLAST of Lcy12g018860 vs. NCBI nr
Match: KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 116/161 (72.05%), Postives = 130/161 (80.75%), Query Frame = 0
BLAST of Lcy12g018860 vs. NCBI nr
Match: KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa]) HSP 1 Score: 208.8 bits (530), Expect = 3.9e-50 Identity = 110/145 (75.86%), Postives = 117/145 (80.69%), Query Frame = 0
BLAST of Lcy12g018860 vs. NCBI nr
Match: XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus]) HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48 Identity = 110/163 (67.48%), Postives = 121/163 (74.23%), Query Frame = 0
BLAST of Lcy12g018860 vs. NCBI nr
Match: KDP41585.1 (hypothetical protein JCGZ_15992 [Jatropha curcas]) HSP 1 Score: 64.7 bits (156), Expect = 9.1e-07 Identity = 49/142 (34.51%), Postives = 70/142 (49.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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