Lcy12g017440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g017440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger protein 1-like
Location	Chr12: 45049694 .. 45050445 (-)
RNA-Seq Expression	Lcy12g017440
Synteny	Lcy12g017440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCACACAAAACAAATCAAACTCAAAAGCCTCCCAAAAAAAAAAAAAAATCTCCCCTTTTTCCAAATGGAACCGGAATCCGACCGGAACCCACCTTCCGGCGACGGCGACGAGGAAACCGGCGAACTTTCCGACGACCGGAGCACGCTTCTGGATCTTCACCTCTCAACGAATTGTTCTTCGGATGGAACGACGAAACCCAGAATTTTCTCATGCAATTATTGCCAGAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCTCATAAAAGAGAGCGGACTTTGGCCAAACGAGTCCAGAGATTCGATTGGGCGGCGTCGATGCCGCTTCACGGCGGCGCGTTTGATAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTGTGGGTTTTTTTGGTGGGTCTTCTTCTTCTTCTCAGTTGTGGGCGAGGCCGGTGTTTCTGGGACAGCAGCCGGCGGTGGGGCGGCTGACGGCGGCGGTTGGTGGGCGGAGTTTTGGGAGATTTGATGACGTGGCTGGGTGGCCGGCGATTGGAGGCTCCAACGCCGGTAATGAAAGTAGTAGTAATGTTAATATTGTTCGTTCTCAGACCAAACAAGATCAGGAAAATCAGACCAATTTCCTTGACTTGTCTCTCAAACTCTAACCCTAAGCAAATTATTGTTATTATTATATTTTTATTATCTTAATTATTGAGTTAAATTACTCGTTAATTTTTAGAATTGTG

mRNA sequence

TTTCTCACACAAAACAAATCAAACTCAAAAGCCTCCCAAAAAAAAAAAAAAATCTCCCCTTTTTCCAAATGGAACCGGAATCCGACCGGAACCCACCTTCCGGCGACGGCGACGAGGAAACCGGCGAACTTTCCGACGACCGGAGCACGCTTCTGGATCTTCACCTCTCAACGAATTGTTCTTCGGATGGAACGACGAAACCCAGAATTTTCTCATGCAATTATTGCCAGAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCTCATAAAAGAGAGCGGACTTTGGCCAAACGAGTCCAGAGATTCGATTGGGCGGCGTCGATGCCGCTTCACGGCGGCGCGTTTGATAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTGTGGGTTTTTTTGGTGGGTCTTCTTCTTCTTCTCAGTTGTGGGCGAGGCCGGTGTTTCTGGGACAGCAGCCGGCGGTGGGGCGGCTGACGGCGGCGGTTGGTGGGCGGAGTTTTGGGAGATTTGATGACGTGGCTGGGTGGCCGGCGATTGGAGGCTCCAACGCCGGTAATGAAAGTAGTAGTAATGTTAATATTGTTCGTTCTCAGACCAAACAAGATCAGGAAAATCAGACCAATTTCCTTGACTTGTCTCTCAAACTCTAACCCTAAGCAAATTATTGTTATTATTATATTTTTATTATCTTAATTATTGAGTTAAATTACTCGTTAATTTTTAGAATTGTG

Coding sequence (CDS)

ATGGAACCGGAATCCGACCGGAACCCACCTTCCGGCGACGGCGACGAGGAAACCGGCGAACTTTCCGACGACCGGAGCACGCTTCTGGATCTTCACCTCTCAACGAATTGTTCTTCGGATGGAACGACGAAACCCAGAATTTTCTCATGCAATTATTGCCAGAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCTCATAAAAGAGAGCGGACTTTGGCCAAACGAGTCCAGAGATTCGATTGGGCGGCGTCGATGCCGCTTCACGGCGGCGCGTTTGATAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTGTGGGTTTTTTTGGTGGGTCTTCTTCTTCTTCTCAGTTGTGGGCGAGGCCGGTGTTTCTGGGACAGCAGCCGGCGGTGGGGCGGCTGACGGCGGCGGTTGGTGGGCGGAGTTTTGGGAGATTTGATGACGTGGCTGGGTGGCCGGCGATTGGAGGCTCCAACGCCGGTAATGAAAGTAGTAGTAATGTTAATATTGTTCGTTCTCAGACCAAACAAGATCAGGAAAATCAGACCAATTTCCTTGACTTGTCTCTCAAACTCTAA

Protein sequence

MEPESDRNPPSGDGDEETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGFFGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNVNIVRSQTKQDQENQTNFLDLSLKL

Homology

[Close]

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 67/178 (37.64%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 45  PRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 104
           PR+FSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 105 FDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGFFGGSSSSSQLWARPVFLGQQPAVGRL 164
           F   AS+PLHG   +R +LGI AH+  I KP      ++S S ++ + +   Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKPSFLGRQTTSLSHVFKQSIH--QKPTIGKM 184

Query: 165 TAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNVNIVRSQTKQDQENQTNFLDLSLKL 201
                        +       G +N+   ++    I   ++ Q+  NQ   +DL+LKL
Sbjct: 185 -----------LPEKFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-19
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 39  SDGTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAS---------- 98
           S  +T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   +AS          
Sbjct: 52  STTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSP 111

Query: 99  MPLHGGAFDRRSLGIHAH--AQQIQKPVGFFGGSSSSSQLWARPVFLGQQPAVGR 142
           +P HG   + RSLGI AH  + ++    GF G     +  W+R  F  QQPA+G+
Sbjct: 112 LPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN--WSRLPF-DQQPAIGK 163

[Close]

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.1e-14
Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 4   ESDRNPPSGDGDEETG--ELSDDRSTLLDLHLSTNCSSDGTTK-------PRIFSCNYCQ 63
           ++ R  P+  G E +   +LS   S  + L L  N + +  TK       PR+FSCNYC+
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCR 65

Query: 64  RKFFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHA 108
           RKF+SSQALGGHQNAHKRERT+AKR                +   SLG+ AH+
Sbjct: 66  RKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 7.7e-13
Identity = 68/210 (32.38%), Postives = 89/210 (42.38%), Query Frame = 0


Query: 23  DDRSTLLDLHLSTNCSSDG---------TTKPRIFSCNYCQRKFFSSQALGGHQNAHKRE 82
           D  S+ L L LS+   S           +   R+FSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 83  RTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGFFGGSSSSSQLWARPVFL 142
           RTLAKR  R   A   P  G + +  +    A    +       G  +S   L  R    
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSS 170

Query: 143 GQQPAVGRLTAAVGGRSFGRF--------------DDVAG--WPA-------IGGSNAGN 201
               ++ R T     R+  RF              DD A   WP             AGN
Sbjct: 171 AHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGN 230

[Close]

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.5e-12
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 10 PSGDGDEETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRKFFSSQALGGHQNA 69
          PS    +   EL  + S++     S+  SS    +PR+FSCNYCQRKF+SSQALGGHQNA
Sbjct: 14 PSYKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNA 73

Query: 70 HKRERTLAKR 80
          HK ERTLAK+
Sbjct: 74 HKLERTLAKK 83

[Close]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 165/204 (80.88%), Postives = 181/204 (88.73%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    E  ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 161

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW RP+F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 162 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 221

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 222 SIVHSQTKQDQD-QTNFLDLSLKL 243

[Close]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 164/204 (80.39%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    E  ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 100

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 101 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 160

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW R +F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 161 FSGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 220

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 221 SIVHSQTKQDQD-QTNFLDLSLKL 242

[Close]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL
Match: A0A6J1J146 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 155/205 (75.61%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MEPESDRNP----PSGDGDEETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           ME ++D+ P       DGDEETGELSDDR T+LDLHLS       TTKPRIFSCNYC RK
Sbjct: 1   MELQADKTPLFEDVEEDGDEETGELSDDRRTVLDLHLS-------TTKPRIFSCNYCHRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDW-AASMPLHGGAFDRRSLGIHAHAQQIQKPVG 120
           FFSSQALGGHQNAHKRERTLAKRVQRF W AA++PLHGGAF  RSLGIHAHAQQIQKP+G
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHGRSLGIHAHAQQIQKPLG 120

Query: 121 FFGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSN 180
           FFGG +SS  LW RPVF+GQQPAV RLT  +GGR+FGR+DDVA WPAIGGSNAGNE+ ++
Sbjct: 121 FFGGPTSSPPLWPRPVFMGQQPAVERLTTTIGGRNFGRYDDVARWPAIGGSNAGNENINH 180

Query: 181 VNIVRSQTKQDQENQTNFLDLSLKL 201
            NIV SQTKQDQ  QTNFLDLSLKL
Sbjct: 181 DNIVHSQTKQDQ-GQTNFLDLSLKL 197

[Close]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL
Match: A0A6J1FKE2 (zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73
Identity = 154/205 (75.12%), Postives = 168/205 (81.95%), Query Frame = 0


Query: 1   MEPESDRNP----PSGDGDEETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           ME ++D+ P       DGD++TGELSDDRST+L LHLS       TTKPRIFSCNYC RK
Sbjct: 1   MELQADKTPLFDDVEEDGDKKTGELSDDRSTVLGLHLS-------TTKPRIFSCNYCHRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDW-AASMPLHGGAFDRRSLGIHAHAQQIQKPVG 120
           F SSQALGGHQNAHKRERTLAKRVQRF W AA++PLHGGAF RRSLGIHAHAQQIQKP+G
Sbjct: 61  FISSQALGGHQNAHKRERTLAKRVQRFHWAAAAIPLHGGAFHRRSLGIHAHAQQIQKPLG 120

Query: 121 FFGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSN 180
           FFGG +SS  LW RPVF+GQQPAV RLT A+GGR+FGR+DDVA WPAIGGSNAGNE    
Sbjct: 121 FFGGPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE---- 180

Query: 181 VNIVRSQTKQDQENQTNFLDLSLKL 201
            NIV SQTKQDQ  QTNFLDLSLKL
Sbjct: 181 -NIVHSQTKQDQ-GQTNFLDLSLKL 192

[Close]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.8e-72
Identity = 154/211 (72.99%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE-ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRKFFS 60
           ME  +D NP SG+G+E +  E S++RS+LL+L LS+N SSD T KPRIFSCNYCQRKFFS
Sbjct: 1   MESHTDGNPFSGEGEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKFFS 60

Query: 61  SQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRR-SLGIHAHAQQIQKP--VG- 120
           SQALGGHQNAHKRERTLAKRVQ+FDWAA++PLHGGAFDRR SLG+HAH+QQIQKP  VG 
Sbjct: 61  SQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPAVGL 120

Query: 121 FFGGS--SSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNES- 180
           FFGG+  SS SQLW RP+F+GQQPAVGRL A +GGR+FGR+DDVA W AIG SNAGNES 
Sbjct: 121 FFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGNESR 180

Query: 181 ---SSNVNIVRSQTKQDQENQTNFLDLSLKL 201
              ++N NIV SQT+QD++ QTNFLDLSLKL
Sbjct: 181 NNNNNNSNIVHSQTQQDKD-QTNFLDLSLKL 210

[Close]

BLAST of Lcy12g017440 vs. NCBI nr
Match: KAG6591545.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85
Identity = 166/204 (81.37%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    ET ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEEDERETAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW RP+F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 180

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 181 SIVHSQTKQDQD-QTNFLDLSLKL 202

[Close]

BLAST of Lcy12g017440 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85
Identity = 166/204 (81.37%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    ET ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDERETAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW RP+F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 180

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 181 SIVHSQTKQDQD-QTNFLDLSLKL 202

[Close]

BLAST of Lcy12g017440 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 322.4 bits (825), Expect = 2.8e-84
Identity = 165/204 (80.88%), Postives = 181/204 (88.73%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    E  ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 161

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW RP+F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 162 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 221

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 222 SIVHSQTKQDQD-QTNFLDLSLKL 243

[Close]

BLAST of Lcy12g017440 vs. NCBI nr
Match: XP_023536424.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 164/204 (80.39%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    E  ELSDDRSTLLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW RP+F+GQQPAVGRLT   GGR+FGRFDDV GWPAIG SNAGNE S+NV
Sbjct: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNV 180

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTK DQ+ QTNFLDLSLKL
Sbjct: 181 SIVHSQTKPDQD-QTNFLDLSLKL 202

[Close]

BLAST of Lcy12g017440 vs. NCBI nr
Match: XP_022976191.1 (zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 164/204 (80.39%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   MEPESDRNPPSGDGDE----ETGELSDDRSTLLDLHLSTNCSSDGTTKPRIFSCNYCQRK 60
           MEP +DRNP SGDG+E    E  ELSDDRS+LLDL LS+N SSD TTKPR+FSCNYCQRK
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 100

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW A++PLHGGAFDRRSLGIHAH+QQIQKPVGF
Sbjct: 101 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 160

Query: 121 FGGSSSSSQLWARPVFLGQQPAVGRLTAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNV 180
           F G   +SQLW R +F+GQQPAVGRLT  +GGR+FGRFDDVAGWPAIG SNAGNE S+NV
Sbjct: 161 FSGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 220

Query: 181 NIVRSQTKQDQENQTNFLDLSLKL 201
           +IV SQTKQDQ+ QTNFLDLSLKL
Sbjct: 221 SIVHSQTKQDQD-QTNFLDLSLKL 242

[Close]

BLAST of Lcy12g017440 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 67/178 (37.64%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 45  PRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 104
           PR+FSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 105 FDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGFFGGSSSSSQLWARPVFLGQQPAVGRL 164
           F   AS+PLHG   +R +LGI AH+  I KP      ++S S ++ + +   Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKPSFLGRQTTSLSHVFKQSIH--QKPTIGKM 184

Query: 165 TAAVGGRSFGRFDDVAGWPAIGGSNAGNESSSNVNIVRSQTKQDQENQTNFLDLSLKL 201
                        +       G +N+   ++    I   ++ Q+  NQ   +DL+LKL
Sbjct: 185 -----------LPEKFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of Lcy12g017440 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 42  TTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAS---------MPLH 101
           +T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   AA+         +P H
Sbjct: 98  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFH 157

Query: 102 GGAFDRRSLGIHAHAQQIQKPVGF--FGGSSSSSQLWARPVFLGQQPAVGRLTA 145
            G +  R+LGI AH+    KP  +  +GG       W+R + L QQPA+ +LT+
Sbjct: 158 -GQYSNRTLGIQAHSMS-HKPSSYNVYGGEYGQIN-WSR-IPLVQQPAIAKLTS 207

[Close]

BLAST of Lcy12g017440 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 39  SDGTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAS---------- 98
           S  +T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   +AS          
Sbjct: 52  STTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSP 111

Query: 99  MPLHGGAFDRRSLGIHAH--AQQIQKPVGFFGGSSSSSQLWARPVFLGQQPAVGR 142
           +P HG   + RSLGI AH  + ++    GF G     +  W+R  F  QQPA+G+
Sbjct: 112 LPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN--WSRLPF-DQQPAIGK 163

[Close]

BLAST of Lcy12g017440 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-15
Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 4   ESDRNPPSGDGDEETG--ELSDDRSTLLDLHLSTNCSSDGTTK-------PRIFSCNYCQ 63
           ++ R  P+  G E +   +LS   S  + L L  N + +  TK       PR+FSCNYC+
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCR 65

Query: 64  RKFFSSQALGGHQNAHKRERTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHA 108
           RKF+SSQALGGHQNAHKRERT+AKR                +   SLG+ AH+
Sbjct: 66  RKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Lcy12g017440 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 75.5 bits (184), Expect = 5.5e-14
Identity = 68/210 (32.38%), Postives = 89/210 (42.38%), Query Frame = 0


Query: 23  DDRSTLLDLHLSTNCSSDG---------TTKPRIFSCNYCQRKFFSSQALGGHQNAHKRE 82
           D  S+ L L LS+   S           +   R+FSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 83  RTLAKRVQRFDWAASMPLHGGAFDRRSLGIHAHAQQIQKPVGFFGGSSSSSQLWARPVFL 142
           RTLAKR  R   A   P  G + +  +    A    +       G  +S   L  R    
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSS 170

Query: 143 GQQPAVGRLTAAVGGRSFGRF--------------DDVAG--WPA-------IGGSNAGN 201
               ++ R T     R+  RF              DD A   WP             AGN
Sbjct: 171 AHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGN 230

The following BLAST results are available for this feature:

BLAST of Lcy12g017440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	2.2e-20	37.64	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	4.2e-19	49.57	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39266	4.1e-14	42.48	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	7.7e-13	32.38	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	6.5e-12	55.71	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Lcy12g017440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F839	1.3e-84	80.88	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	1.1e-83	80.39	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A6J1J146	2.5e-75	75.61	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1	[more]
A0A6J1FKE2	2.4e-73	75.12	zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV...	[more]
A0A5A7VC97	5.8e-72	72.99	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Lcy12g017440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591545.1	5.6e-85	81.37	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024430.1	5.6e-85	81.37	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936656.1	2.8e-84	80.88	zinc finger protein 1-like [Cucurbita moschata]	[more]
XP_023536424.1	2.3e-83	80.39	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976191.1	2.3e-83	80.39	zinc finger protein 1-like [Cucurbita maxima]	[more]

BLAST of Lcy12g017440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	1.6e-21	37.64	zinc-finger protein 1	[more]
AT5G10970.1	1.8e-20	50.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	3.0e-20	49.57	zinc finger protein 3	[more]
AT1G24625.1	2.9e-15	42.48	zinc finger protein 7	[more]
AT1G66140.1	5.5e-14	32.38	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 25..88 e-value: 1.9E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR47287:SF11	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 84..200
None	No IPR available	PANTHER	PTHR47287:SF11	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 24..83
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 84..200
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 24..83
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 50..70
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 48..75 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 44..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g017440.1	Lcy12g017440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane