Lcy12g016440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g016440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	guanine nucleotide-binding protein subunit gamma 2-like
Location	Chr12: 44285426 .. 44287711 (-)
RNA-Seq Expression	Lcy12g016440
Synteny	Lcy12g016440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAAAAAGAACTTTTAACCAAAAAAAAAAAGGGAATATTTTAAAACTAATATACAAATATTCAAATAAGGACATCTTACAACAATTTCGAACACATGAATAAAAAAAAATCAAAGACAACATTACTAATACTCTAGAGTACAACTAATCAAACTAATCAACTCACAAGTTGAAAGATAAGATTATAACTACATTCCAATGGTTTAGAACATGGAGAAGAAAAGTCTTCATTGGCTATGGAGGAGAATGGAGGGAGTTTCTATGTATGATATTAATTAAGCAATAATGTAATGGAAGAAAATGGGAGAGAGAAAGAGAGACTTGGCGGCTTTGATGGGGTTTGAGTTTGACCTCACCAATCCTAAAATTCAATTAAAATCTCAACACCCTTATCTCCATTTCCCAATTCTCACCCACTTGGCTCTCATCTTCCCAATAACATTATTAAAATCCTTCTTCTTCTTCTTCACAGAGAGATAAAACCAGAGAGAGAAAGCCCAGATATATAGAAGAAAAAGGCTCATTCACAACTGTAGAGAGATCCTATAGAAAGAGAAGAAAAGGGCCAAAAAGGCATACCTTATTACACAACTGTAGTCCAGAAATTGCTGTTTGGCCTTTTCTTTTTTCTCTTTTGCTTCTACTTTTTCACAGAGTTTTGACTGTCCACTTTATTCCTTTTCATCATAATCTCATCTCTGCCTGCTTCAATCATTCCAATTTACATTAGAAAAAAGAGAGAAAGAGAAAAAAAAAAAAACACATAAACATTTACACCTTGCTTTCATCATTTGTTTCCAGCTTTTTTTGGTCCATTTCTTCCCCCTTTTTTCCATGTGTGAATGTTTTCTAAACCTTCTCTTTATCCTCACAAACAACCCATCTCTCTCTTCTCTTCAATTCCCTTTGTTTATTTAAGATTCCAAATTCTTTCCCCTATCTCTATTGTGCTTTTCAAGATTTTCCCACCATGGTTGTTGAGATTTCTTTCACATAACAGAATAGAGTACTGAATTTGATTTACCTGTTAGTCGCAACAATGGAGGAACAGCACCAATCACAGCCGCTGTCCTCGCGGTCGCCGCCTGGAGGTGGAGGAGAAGAATCAGCGAAGAAAGAAGAAGAGGTCAATTCAGAAACCAAATCTAAATCTACAGTTCGGTACAAGGATACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAGTCAGACTCCAAAACGAAATCAATATCATCCAGGTAATCGCTATTTCCTTTTACGATACGTAGATTCACCTTAATCTGATAATAATTCACGTTTCCAGCCATTTTCCCTCTGAAATTAAAGACGATGATGAATCGTGTTGCAGGAAGAATTGCAACAGCTCGAGAGCACAGGCGAATCCTCCACCGTCTGCAAAGAGTAAGAACTAAGCCGATCGATCAATTCATTAGGTTTTCGAAAAATTCCGAATCATTTATACATTCATCATTCATCCTCAATTTCAAAGCAAAATTAATCGAATCATCGTCGCCATTACTTTAGGGCTTAATTTCTTCACCTGTTTACGTACAGACTCATCTCCAGCGTCGAATCGATTCCCGATCCTCTGCTTTCAGAGTAAGATTATCACCATTAACATTAATTATCGATCTTCAATCTTTACTATCCTTTATACCCCTAATCAACGAACAATGATTCGATATTATACAGAACAATCGGTCCGGCGGACGTCAACTGGGACCAGTGGTTCCGAGGTGCTCACGGCAGCCGAAACCACAGACGGTGGATCTGAATCCGAACAGAGAGATAGAGATCCATTTTTCGCGATCGCCATTGATTTGTAGGTTTTTGAGATCAACTTTTCTGATCGATTGCCGCCATAACCAGGAATGTGAAGAAGAAAATAGAAGCCATTGGGGAATTGAAACGACGACGTCGCGTTCGCCTCATGTGTAAAAGCCTTTGGGTTCAATAATTTATCGTCACTATTCTTACTTTTTGTTTTATGAAAAATTAATTATCACATAGTATTTATCCTTTTTTTATAAAAAAAAAAAAATTATTTAACTTTACAGTTCACATTTGTCTTAATGTTTCGATGATATTATTATTACTAAAATTTGGCCACGAGTAAATTAATATAAATAATGTGAACCTAAACTAACAATCTATTTAATTTAATATTTAATATATTTGTTAAAAGGATTTCTTTATTTTTCTTTTCTTTTTCCTTCCCATTATTGAATACGGTAGGAACATAAGACAACTCAATGTCTTTTGGTTGTACACATTGGTAGACAAG

mRNA sequence

ACTAAAAAGAACTTTTAACCAAAAAAAAAAAGGGAATATTTTAAAACTAATATACAAATATTCAAATAAGGACATCTTACAACAATTTCGAACACATGAATAAAAAAAAATCAAAGACAACATTACTAATACTCTAGAGTACAACTAATCAAACTAATCAACTCACAAGTTGAAAGATAAGATTATAACTACATTCCAATGGTTTAGAACATGGAGAAGAAAAGTCTTCATTGGCTATGGAGGAGAATGGAGGGAGTTTCTATGTATGATATTAATTAAGCAATAATGTAATGGAAGAAAATGGGAGAGAGAAAGAGAGACTTGGCGGCTTTGATGGGGTTTGAGTTTGACCTCACCAATCCTAAAATTCAATTAAAATCTCAACACCCTTATCTCCATTTCCCAATTCTCACCCACTTGGCTCTCATCTTCCCAATAACATTATTAAAATCCTTCTTCTTCTTCTTCACAGAGAGATAAAACCAGAGAGAGAAAGCCCAGATATATAGAAGAAAAAGGCTCATTCACAACTGTAGAGAGATCCTATAGAAAGAGAAGAAAAGGGCCAAAAAGGCATACCTTATTACACAACTGTAGTCCAGAAATTGCTGTTTGGCCTTTTCTTTTTTCTCTTTTGCTTCTACTTTTTCACAGAGTTTTGACTGTCCACTTTATTCCTTTTCATCATAATCTCATCTCTGCCTGCTTCAATCATTCCAATTTACATTAGAAAAAAGAGAGAAAGAGAAAAAAAAAAAAACACATAAACATTTACACCTTGCTTTCATCATTTGTTTCCAGCTTTTTTTGGTCCATTTCTTCCCCCTTTTTTCCATGTGTGAATGTTTTCTAAACCTTCTCTTTATCCTCACAAACAACCCATCTCTCTCTTCTCTTCAATTCCCTTTGTTTATTTAAGATTCCAAATTCTTTCCCCTATCTCTATTGTGCTTTTCAAGATTTTCCCACCATGGTTGTTGAGATTTCTTTCACATAACAGAATAGAGTACTGAATTTGATTTACCTGTTAGTCGCAACAATGGAGGAACAGCACCAATCACAGCCGCTGTCCTCGCGGTCGCCGCCTGGAGGTGGAGGAGAAGAATCAGCGAAGAAAGAAGAAGAGGTCAATTCAGAAACCAAATCTAAATCTACAGTTCGGTACAAGGATACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAGTCAGACTCCAAAACGAAATCAATATCATCCAGGAAGAATTGCAACAGCTCGAGAGCACAGGCGAATCCTCCACCGTCTGCAAAGAACTCATCTCCAGCGTCGAATCGATTCCCGATCCTCTGCTTTCAGAAACAATCGGTCCGGCGGACGTCAACTGGGACCAGTGGTTCCGAGGTGCTCACGGCAGCCGAAACCACAGACGGTGGATCTGAATCCGAACAGAGAGATAGAGATCCATTTTTCGCGATCGCCATTGATTTGTAGGTTTTTGAGATCAACTTTTCTGATCGATTGCCGCCATAACCAGGAATGTGAAGAAGAAAATAGAAGCCATTGGGGAATTGAAACGACGACGTCGCGTTCGCCTCATGTGTAAAAGCCTTTGGGTTCAATAATTTATCGTCACTATTCTTACTTTTTGTTTTATGAAAAATTAATTATCACATAGTATTTATCCTTTTTTTATAAAAAAAAAAAAATTATTTAACTTTACAGTTCACATTTGTCTTAATGTTTCGATGATATTATTATTACTAAAATTTGGCCACGAGTAAATTAATATAAATAATGTGAACCTAAACTAACAATCTATTTAATTTAATATTTAATATATTTGTTAAAAGGATTTCTTTATTTTTCTTTTCTTTTTCCTTCCCATTATTGAATACGGTAGGAACATAAGACAACTCAATGTCTTTTGGTTGTACACATTGGTAGACAAG

Coding sequence (CDS)

ATGGAGGAACAGCACCAATCACAGCCGCTGTCCTCGCGGTCGCCGCCTGGAGGTGGAGGAGAAGAATCAGCGAAGAAAGAAGAAGAGGTCAATTCAGAAACCAAATCTAAATCTACAGTTCGGTACAAGGATACCTTCTTTGGCAGACATAGAATCTCAGCGGCCATAGTCAGACTCCAAAACGAAATCAATATCATCCAGGAAGAATTGCAACAGCTCGAGAGCACAGGCGAATCCTCCACCGTCTGCAAAGAACTCATCTCCAGCGTCGAATCGATTCCCGATCCTCTGCTTTCAGAAACAATCGGTCCGGCGGACGTCAACTGGGACCAGTGGTTCCGAGGTGCTCACGGCAGCCGAAACCACAGACGGTGGATCTGA

Protein sequence

MEEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRNHRRWI

Homology

[Close]

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot
Match: Q93V47 (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=3702 GN=GG2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.9e-15
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 28  EEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELI 87
           E  +S +  + + R  DT  G+HRI A + RL+ E   ++EEL+QLE    +S  CKE +
Sbjct: 2   EAGSSNSSGQLSGRVVDT-RGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFL 61

Query: 88  SSVESIPDPLLSETIGPADVNWDQWFRG 116
            SV+S PDPLL ET GP +  WDQWF G
Sbjct: 62  DSVDSKPDPLLPETTGPVNATWDQWFEG 88

[Close]

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot
Match: Q9FDX9 (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=3702 GN=GG1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.8e-14
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 48  GRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADV 107
           G+HRI A + R++ E+  +++EL+++E+T   STVC+EL+S +E  PDPLL  T GP ++
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 108 NWDQWFRGAHGSRNHR 124
            WD+WF G +G    R
Sbjct: 79  GWDRWFEGPNGGEGCR 94

[Close]

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot
Match: A2X0N9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica OX=39946 GN=RGG2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           EE+ + +  ++R   G   ++  ++  +V      +S       + G+HR+SAAI RL  
Sbjct: 24  EEEEEVERRAARPVSGQQQQQQRRRPTDVGGGAAMRSV-----GYVGKHRLSAAIARLDQ 83

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           E+  +Q+EL +LE+   +S  C+ +I+S E   DPLL  TIGP + +W++WF+    SR+
Sbjct: 84  ELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLPVTIGPENASWERWFQRVRSSRS 142

Query: 122 HRRW 126
           ++ W
Sbjct: 144 NKWW 142

[Close]

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot
Match: Q6YXX9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG2 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           EE+ + +  ++R   G   ++  ++  +V      +S       + G+HR+SAAI RL  
Sbjct: 24  EEEEEVERRAARPVSGQQQQQQRRRPTDVGGGAAMRSV-----GYVGKHRLSAAIARLDQ 83

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           E+  +Q+EL +LE+   +S  C+ +I+S E   DPLL  TIGP + +W++WF+    SR+
Sbjct: 84  ELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLPVTIGPENASWERWFQRVRSSRS 142

Query: 122 HRRW 126
           ++ W
Sbjct: 144 NKWW 142

[Close]

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot
Match: B8AN27 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica OX=39946 GN=RGG1 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 48  GRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADV 107
           GRHRI A + +L+ E   ++EEL++L+ T + S   +EL+ + ES  DPLL  T GPA  
Sbjct: 14  GRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLLPVTTGPACQ 73

Query: 108 NWDQWFRGAHGSRNHRRW 126
           +WD+WF G    R  + W
Sbjct: 74  SWDRWFEGPQDLRRCKCW 91

[Close]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL
Match: A0A6J1FFX4 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX=3662 GN=LOC111443682 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.1e-47
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS SPP   GEESAK++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPSPP---GEESAKRQEGVNSETKSKSAVRCKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 125

[Close]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL
Match: A0A6J1IGB7 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3661 GN=LOC111476672 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.6e-46
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS SP    GEESAK++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPSP---SGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 125

[Close]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL
Match: A0A6J1DUG2 (guanine nucleotide-binding protein subunit gamma 2-like OS=Momordica charantia OX=3673 GN=LOC111023181 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.5e-44
Identity = 94/129 (72.87%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 1   MEEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVR---YKDTFFGRHRISAAIV 60
           M++Q QSQP  S SPPGGGGEE+AK+E+E NSETK KS VR     +  FGRHRI+AAI 
Sbjct: 1   MDDQPQSQPFPSPSPPGGGGEEAAKREQEANSETKPKSAVRCNNNNNNLFGRHRITAAIT 60

Query: 61  RLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAH 120
           RLQNEI+II++ELQ+LES GE+STVC+EL+SSVES PDPLL ET GP D NWDQWFRGAH
Sbjct: 61  RLQNEISIIEDELQKLESIGEASTVCQELVSSVESFPDPLLPETRGPTDANWDQWFRGAH 120

Query: 121 GSRNHRRWI 127
           GSRNHRRWI
Sbjct: 121 GSRNHRRWI 129

[Close]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL
Match: A0A6J1FJE8 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445905 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MEEQHQSQPLSSRSPPGGGGEESAKKE--EEVNSE------TKSKSTVRYKDTFFGRHRI 60
           M+E HQ       SPP GGGE+SAK+E  EEV+SE      +KSKS    K++FFGRHRI
Sbjct: 1   MDEHHQ-------SPPVGGGEKSAKREEDEEVSSEAEAEVKSKSKSAAPCKNSFFGRHRI 60

Query: 61  SAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQW 120
           SAAI RLQNEINII+EELQQLES GESSTVCKEL+SSVES+PDPLLSETIGP+DVNWDQW
Sbjct: 61  SAAINRLQNEINIIEEELQQLESVGESSTVCKELVSSVESVPDPLLSETIGPSDVNWDQW 120

Query: 121 FRGAHGSRNHRRWI 127
           FRGAH SRNHRRWI
Sbjct: 121 FRGAHDSRNHRRWI 127

[Close]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL
Match: A0A6J1J2U0 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3661 GN=LOC111481299 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 96/136 (70.59%), Postives = 108/136 (79.41%), Query Frame = 0


Query: 1   MEEQHQSQPLSSRSPPGGGGEESAK--KEEEVNSE--------TKSKSTVRYKDTFFGRH 60
           M+E HQ       SPPGGGGE+SAK  ++EEV+SE        +KSKS    K++FFGRH
Sbjct: 1   MDEHHQ-------SPPGGGGEKSAKGEEDEEVSSEVDAEAEAKSKSKSAAPCKNSFFGRH 60

Query: 61  RISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWD 120
           RISAAI RLQNEINII+EELQQLES GE S VCKEL+SSVES+PDPLLSETIGP D+NWD
Sbjct: 61  RISAAINRLQNEINIIEEELQQLESVGEPSIVCKELVSSVESVPDPLLSETIGPPDINWD 120

Query: 121 QWFRGAHGSRNHRRWI 127
           QWFRGAH SRNHRRWI
Sbjct: 121 QWFRGAHNSRNHRRWI 129

[Close]

BLAST of Lcy12g016440 vs. NCBI nr
Match: XP_022937378.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata])

HSP 1 Score: 197.2 bits (500), Expect = 8.4e-47
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS SPP   GEESAK++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPSPP---GEESAKRQEGVNSETKSKSAVRCKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 125

[Close]

BLAST of Lcy12g016440 vs. NCBI nr
Match: XP_022976216.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 5.5e-46
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS SP    GEESAK++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPSP---SGEESAKRQEGVNSETKSKSAVRSKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 125

[Close]

BLAST of Lcy12g016440 vs. NCBI nr
Match: KAG7024498.1 (Guanine nucleotide-binding protein subunit gamma 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS S P   GEESAK++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPS-PSPPGEESAKRQEGVNSETKSKSAVRCKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 127

[Close]

BLAST of Lcy12g016440 vs. NCBI nr
Match: XP_023536636.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 98/125 (78.40%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 2   EEQHQSQPLSSRSPPGGGGEESAKKEEEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQN 61
           ++QHQSQP+SS SP    GEES K++E VNSETKSKS VR K+TFFGRHRISAAI RLQN
Sbjct: 4   DKQHQSQPMSSPSP---SGEESVKRQEGVNSETKSKSAVRCKNTFFGRHRISAAITRLQN 63

Query: 62  EINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGSRN 121
           EINII+EEL+QLES GESSTVC++L+SSV +IPDPLL ETIGP DVNWDQWFRGAHG RN
Sbjct: 64  EINIIEEELRQLESIGESSTVCEDLVSSVVAIPDPLLPETIGPTDVNWDQWFRGAHGGRN 123

Query: 122 HRRWI 127
           HRRWI
Sbjct: 124 HRRWI 125

[Close]

BLAST of Lcy12g016440 vs. NCBI nr
Match: XP_038897196.1 (guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida])

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45
Identity = 104/127 (81.89%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 2   EEQHQSQPLSS-RSPPGGGGEESAKKEEEVNSETKSKSTVRYK-DTFFGRHRISAAIVRL 61
           +EQHQSQP SS   PPG G  ESAK EEEVN ETKSKS VR K +TFFGRHRISAAI RL
Sbjct: 3   DEQHQSQPPSSPPPPPGAGRRESAKDEEEVNPETKSKSAVRCKNNTFFGRHRISAAITRL 62

Query: 62  QNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADVNWDQWFRGAHGS 121
           QNEINII EELQQLE+ GESSTVC   ISSVESIPDPLL ETIGPAD NWDQWFRGAHGS
Sbjct: 63  QNEINIINEELQQLENIGESSTVCAGFISSVESIPDPLLPETIGPADANWDQWFRGAHGS 122

Query: 122 RNHRRWI 127
           RNHRRWI
Sbjct: 123 RNHRRWI 129

[Close]

BLAST of Lcy12g016440 vs. TAIR 10
Match: AT3G22942.1 (G-protein gamma subunit 2 )

HSP 1 Score: 81.3 bits (199), Expect = 6.3e-16
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 28  EEVNSETKSKSTVRYKDTFFGRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELI 87
           E  +S +  + + R  DT  G+HRI A + RL+ E   ++EEL+QLE    +S  CKE +
Sbjct: 2   EAGSSNSSGQLSGRVVDT-RGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFL 61

Query: 88  SSVESIPDPLLSETIGPADVNWDQWFRG 116
            SV+S PDPLL ET GP +  WDQWF G
Sbjct: 62  DSVDSKPDPLLPETTGPVNATWDQWFEG 88

[Close]

BLAST of Lcy12g016440 vs. TAIR 10
Match: AT3G63420.1 (Ggamma-subunit 1 )

HSP 1 Score: 77.8 bits (190), Expect = 7.0e-15
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 48  GRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADV 107
           G+HRI A + R++ E+  +++EL+++E+T   STVC+EL+S +E  PDPLL  T GP ++
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 108 NWDQWFRGAHGSRNHR 124
            WD+WF G +G    R
Sbjct: 79  GWDRWFEGPNGGEGCR 94

[Close]

BLAST of Lcy12g016440 vs. TAIR 10
Match: AT3G63420.2 (Ggamma-subunit 1 )

HSP 1 Score: 77.8 bits (190), Expect = 7.0e-15
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 48  GRHRISAAIVRLQNEINIIQEELQQLESTGESSTVCKELISSVESIPDPLLSETIGPADV 107
           G+HRI A + R++ E+  +++EL+++E+T   STVC+EL+S +E  PDPLL  T GP ++
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 108 NWDQWFRGAHGSRNHR 124
            WD+WF G +G    R
Sbjct: 79  GWDRWFEGPNGGEGCR 94

The following BLAST results are available for this feature:

BLAST of Lcy12g016440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93V47	8.9e-15	46.59	Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9FDX9	9.8e-14	44.74	Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=37...	[more]
A2X0N9	1.1e-12	32.26	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica...	[more]
Q6YXX9	1.1e-12	32.26	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japoni...	[more]
B8AN27	1.6e-11	42.31	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica...	[more]

BLAST of Lcy12g016440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFX4	4.1e-47	80.00	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX...	[more]
A0A6J1IGB7	2.6e-46	79.20	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1DUG2	5.5e-44	72.87	guanine nucleotide-binding protein subunit gamma 2-like OS=Momordica charantia O...	[more]
A0A6J1FJE8	1.8e-42	73.88	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX...	[more]
A0A6J1J2U0	2.6e-41	70.59	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3...	[more]

BLAST of Lcy12g016440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937378.1	8.4e-47	80.00	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata]	[more]
XP_022976216.1	5.5e-46	79.20	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima]	[more]
KAG7024498.1	1.2e-45	79.20	Guanine nucleotide-binding protein subunit gamma 1 [Cucurbita argyrosperma subsp...	[more]
XP_023536636.1	1.6e-45	78.40	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. p...	[more]
XP_038897196.1	2.7e-45	81.89	guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida]	[more]

BLAST of Lcy12g016440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22942.1	6.3e-16	46.59	G-protein gamma subunit 2	[more]
AT3G63420.1	7.0e-15	44.74	Ggamma-subunit 1	[more]
AT3G63420.2	7.0e-15	44.74	Ggamma-subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..76
None	No IPR available	SMART	SM01224	G_gamma_2	coord: 53..125 e-value: 0.0012 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..40
None	No IPR available	PANTHER	PTHR35129:SF5	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2-LIKE	coord: 23..126
None	No IPR available	PANTHER	PTHR35129	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1	coord: 23..126
IPR015898	G-protein gamma-like domain	PFAM	PF00631	G-gamma	coord: 57..115 e-value: 9.8E-9 score: 35.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g016440.1	Lcy12g016440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway