Lcy12g015910 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g015910
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Rhomboid-like protein 11
Location	Chr12: 43854943 .. 43857859 (+)
RNA-Seq Expression	Lcy12g015910
Synteny	Lcy12g015910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGCTCTCTAATTCCGAACTGAACGATGCAGTTGCAGTTGCAGCAACTTCATGGAGGCCGAATTTTGAAACCTCGTGGACTCTGCAAGCAAATGCCTACGACTTCCATTTCTCGTCTCTCCAGCTTCAGCTTCAGCTCAAGCTCAAGCTCAAGCTCGCTCAGATTCCCCTATCCATTGATTCATCCGCTCCAATTTAGCAATGTTCTTCGTCTTCCCGCTCGTTCCGTTGCTGCGAAACCCATTGCGATGTGCAAAATGAACGATGCAGGTTGTTTTTTATTTGCAACAATTTATCTGTTTAGCTGGGATTTTGTTAAGGAATTTTTGCCAACTTACGGGGGGCTTTTGTGAATTTCTCGACGAATATGCGTGCGGTTGGGTGAAAGTAAAGAAGAAATTTGTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTGGGAAAATCGCTGCAGAGTAGGAAACAAGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAGTATATGTGGCTGATCATATTTTCAAGGTAGGGTTTATGTTCTCTTATGCTATTAAGTAGAGTGAAAAAGCCCCAAAATATTGCCAGAAAGTTGAGTTGTTGCAGAGTAATTGGTTGATAGTTCTTTAGGTCAAACATTTATTTACTTTGCACCCATATAAATGAATTAACTATTTCTCAAAGCTGACTGTTATAGGGCTTTAAGAGGATAATCCACTGTTAAGCGGATTATTAACAGTGAACCTTTTCATTAAGCATCATATTTGCCAAAGGGAGCATAGCTCAACGGTAATTGACATGTACCTTCCACCAAAAGGTCAAAGGTTCGAATCCCCCAATGTTGTTGAACTCAAAAAAAAAAATTAAGCATCAGATTCATAGCAGTCAACTTAGCTAGTTAAAGGCTCAATTTCCCTGTTGGAGAGATTCATCCTAAAAGCATCAGATTCTAATATTTTCTCATCCCATCCCGCATGTCTGCAATGAACACCTCTCTACGGCTAGCCACATTATAAATAGTTCGATAGTGGATAACGAGGAGCCTCTTTCAATTAGGAATCCCAAATTCTGACCCTTATCACTGGAAGACCAATCTGAAGAACTTATCATCCACAGCCATTTGCACATCAGAGCTTTGTTACTTGAGAGAGTTGAGACCAAGTTGCCTATGCTCAAACTTCAACTTTTCAACATAAGAGAAACCAATTACAACAATCTAACCAAACGAGGAAAAAAAAGGAACCAATTCGCTTCTTAAAAAAAACCTGAAAAACAATTTTCATCCTTGACGTGTGTTTGACCATCAGTTTTATCTAGTAAGATTGAAAAGAATGAGGACGATGACTAAATTCTCTTTGTTTGTAGGTTCGTGGTATAGAATCTCTGTACCTGTTCCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGTGAGTTTTTGTGCTCTTCAAAATCATTCAAATTTCACATTTCTCATTAAATGGATCGGTGAAGTTAGAAAAGCTTGCTTATCTTCTCATGAGAATGCATTTTTCTGGTTTTACAAGCATGGTTTAATGTAATATAATACTTGCTATTTCCATGAATGTTTGCAGGAACCATCTCTCTAGCAATCTCTTTTTCTTGTATATATTTGGTGAGAACCACTTTCCACCCACAGCCCAAAGAAAAAGAATGTTTCAATATTTCCCATAATCCTTATCTTTTTCTCCCTATATGGACTACTACTTTCTTTCTGGAGGGTGGAAACCATAAAATAGCCAAAATGTGTTGACATTTAATAGTTCCATTATTTCTTATCAACAGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTATCCTATATTCTTACAGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAAAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACCATAAGTGTCCTTGTAAAGGTAACTATCTAAAATATGTTGATTTGTCACTCTCATCAGGATTTTAATACATTTTAATCAAGTAATTCATTCTGGCAGATGTCTTGGGATTGGAGGAAGATCCTTGAAGTCCTAATACTTGGTCAATTCGTTATAGAGAAGGTAGTAAGTTCTCTTTTTACCCCATGTGCATGGTCTTAAACACTTCGATACCAATAAGTATCCATCCCAAATTGGAGTGCATGGCTTACATTGTGCAAGTCATTTTTGAGATGTTCATTGCTCTTTTGCTCTATCTACTGTATGGATACAACAACCAAACAGATATTGCCAACTTGAACATGAGTTGAGACATATACTCTTGACTAGGAGTTCAGATGTTCAAATTCCTCCCTGGTTGAACTCAAAAAAGAAAAAATAATAGAATAGATATTGTCCTTTAAGTAGAAATAAAGAGTTTCTCCCTTTCCTTTTAATACTAAAGAACAAAAAGATCTTGCTGTTTATTAGAATCTCTGGTTCATTTGTGTGAAGGTAAGGTGAGGGGCACTTGCTTATCCATTTGCTTTGTCTGGTCATAATAGGTCATGGAAGCAGCACAAGCTTCGACTGCATTTTCAGGAAGCTTCCGCGGAGGATATGTCAACCATGTTGCCCATCTCTCGGGGGCGCTTGTCGGCGTTGTTCTGGTAGGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGATTGCAGTAGGCAATTCCACTTGAAATGGAACAATGTATTGCAGTTGTATGATATTTATTCTTGTATCGTGTTAAAAATATTTCAACTAGGATTTTGATTACAGGTTTGCATAAGTAATATAAGATACAATATTAAATCGTTGCAATTTCCCCACCACAAAAA

mRNA sequence

ACTGCTCTCTAATTCCGAACTGAACGATGCAGTTGCAGTTGCAGCAACTTCATGGAGGCCGAATTTTGAAACCTCGTGGACTCTGCAAGCAAATGCCTACGACTTCCATTTCTCGTCTCTCCAGCTTCAGCTTCAGCTCAAGCTCAAGCTCAAGCTCGCTCAGATTCCCCTATCCATTGATTCATCCGCTCCAATTTAGCAATGTTCTTCGTCTTCCCGCTCGTTCCGTTGCTGCGAAACCCATTGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGAAAATCGCTGCAGAGTAGGAAACAAGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAGTATATGTGGCTGATCATATTTTCAAGGTTCGTGGTATAGAATCTCTGTACCTGTTCCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTCTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTATCCTATATTCTTACAGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAAAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACCATAAGTGTCCTTGTAAAGATGTCTTGGGATTGGAGGAAGATCCTTGAAGTCCTAATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCACAAGCTTCGACTGCATTTTCAGGAAGCTTCCGCGGAGGATATGTCAACCATGTTGCCCATCTCTCGGGGGCGCTTGTCGGCGTTGTTCTGGTAGGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGATTGCAGTAGGCAATTCCACTTGAAATGGAACAATGTATTGCAGTTGTATGATATTTATTCTTGTATCGTGTTAAAAATATTTCAACTAGGATTTTGATTACAGGTTTGCATAAGTAATATAAGATACAATATTAAATCGTTGCAATTTCCCCACCACAAAAA

Coding sequence (CDS)

ATGCAGTTGCAGTTGCAGCAACTTCATGGAGGCCGAATTTTGAAACCTCGTGGACTCTGCAAGCAAATGCCTACGACTTCCATTTCTCGTCTCTCCAGCTTCAGCTTCAGCTCAAGCTCAAGCTCAAGCTCGCTCAGATTCCCCTATCCATTGATTCATCCGCTCCAATTTAGCAATGTTCTTCGTCTTCCCGCTCGTTCCGTTGCTGCGAAACCCATTGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGAAAATCGCTGCAGAGTAGGAAACAAGAGAAGCGTGTGAATGGTATATTCTGGATTATTCTTCTCAACATTGGAGTATATGTGGCTGATCATATTTTCAAGGTTCGTGGTATAGAATCTCTGTACCTGTTCCACAATCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTCTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTATCCTATATTCTTACAGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAAAAATGCTGTTTCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACCATAAGTGTCCTTGTAAAGATGTCTTGGGATTGGAGGAAGATCCTTGAAGTCCTAATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCACAAGCTTCGACTGCATTTTCAGGAAGCTTCCGCGGAGGATATGTCAACCATGTTGCCCATCTCTCGGGGGCGCTTGTCGGCGTTGTTCTGGTAGGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGA

Protein sequence

MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPLQFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIGVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGYVNHVAHLSGALVGVVLVGLLSRIPSQPPDQDASALHRKGR

Homology

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BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot
Match: Q84MB5 (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11 PE=1 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.4e-95
Identity = 181/272 (66.54%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 39  SSSSSSLRFPYPLIH--------------PLQFSNVLRLPARSVAAKPIAMCKMNDADLI 98
           S   SSLRF +P +H              PLQF  +         ++    C+ + +D+ 
Sbjct: 11  SLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPL-------TVSRSQITCRFSQSDIT 70

Query: 99  SQLELGKSLQSRKQEKRVNGIFWIILLNIGVYVADHIFKVRGIESLYLFHNRPAWYQFFT 158
            Q EL K+  +RK +KR NGIFWIIL+N+G+Y+ADH F+VRGI+SLYL+HN PAWYQF T
Sbjct: 71  PQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVT 130

Query: 159 ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPKNAVSV 218
           ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LP+NAVSV
Sbjct: 131 ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSV 190

Query: 219 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGY--- 278
           GASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS   SG+  GGY   
Sbjct: 191 GASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQ 250

Query: 279 -VNHVAHLSGALVGVVLVGLLSRIPSQPPDQD 293
            VNH+AHLSGALVGVVLV LLS+ PS   DQD
Sbjct: 251 TVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 140 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPK 199
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L K
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 200 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 259
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLP------ 217

Query: 260 FRGGYVNHVAHLSGALVGVVLVGLLSRIP 286
               +V++ AH+ G L G  L  +L   P
Sbjct: 218 ----WVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 123 KVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 182
           K+  +E   + H    W +  +  + HA   HL +N+  L   G  +E++ G   + L Y
Sbjct: 95  KMGALEWRKVVHEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIY 154

Query: 183 ILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDW 227
           +++G+G +I+S L L + ++SVGASGA+FGL   ++L ++  +W
Sbjct: 155 LISGLGGSILSSLFL-QESISVGASGALFGLLG-AMLSELLTNW 195

[Close]

BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot
Match: P96617 (Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=ydcA PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.4e-05
Identity = 40/141 (28.37%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 139 WYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILP 198
           W++  T    HA + HL  N   +++F   +E   G     L Y  +G+  NI +++  P
Sbjct: 58  WWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEP 117

Query: 199 KNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFS--GS 258
            + V VGASGA+FGLF + + +           VL   + + ++  +      AF+   S
Sbjct: 118 LDYVHVGASGAIFGLFGVYLFM-----------VLFRNELIGQEHSKMIITLLAFAVLMS 177

Query: 259 FRGGYVNHVAHLSGALVGVVL 278
           F    +N +AHL G   G +L
Sbjct: 178 FINSNINMMAHLFGLCGGFLL 187

[Close]

BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 32/104 (30.77%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 123 KVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 182
           K+  ++   + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L Y
Sbjct: 114 KMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLY 173

Query: 183 ILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDW 227
           +++G G +++S L   +  +SVGASGA+FGL   ++L ++  +W
Sbjct: 174 MISGFGGSLLSSL-FNRAGISVGASGALFGLLG-AMLSELLTNW 214

[Close]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL
Match: A0A6J1J179 (rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480404 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.6e-137
Identity = 267/312 (85.58%), Postives = 275/312 (88.14%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL----- 60
           MQ +LQQLHG RILKPRGL +QM TTSI+ LS F      SSSSLRF  PL HPL     
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRF------SSSSLRFSSPLFHPLSSSIS 60

Query: 61  --QFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNI 120
             QFSNVLRL ARS AAKPIAMCKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNI
Sbjct: 61  VAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNI 120

Query: 121 GVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180
           GVYVADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE
Sbjct: 121 GVYVADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180

Query: 181 GNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240
           GNFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL
Sbjct: 181 GNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240

Query: 241 ILGQFVIEKVMEAAQASTAFSGSFRGG----YVNHVAHLSGALVGVVLVGLLSRIPSQPP 300
           ILGQFVIEKVMEAAQASTA SGSFRGG     VNHVAHLSGALVGVVLV LLSRIPSQPP
Sbjct: 241 ILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP 300

Query: 301 DQDASALHRKGR 302
           DQDAS LHRK R
Sbjct: 301 DQDASTLHRKVR 306

[Close]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL
Match: A0A6J1FQ99 (rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445986 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.5e-135
Identity = 266/313 (84.98%), Postives = 274/313 (87.54%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL----- 60
           MQ +LQQLHG RILKPRGL +QM TTSI+ LS F      SSSSLRF  PL HPL     
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRF------SSSSLRFSSPLFHPLSASLS 60

Query: 61  --QFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNI 120
             QFSNVLRL ARS AAKPIAMCKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNI
Sbjct: 61  VAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNI 120

Query: 121 GVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180
           GVYVADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE
Sbjct: 121 GVYVADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180

Query: 181 GNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240
           GNFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL
Sbjct: 181 GNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240

Query: 241 ILGQFVIEKVMEAAQASTAFSGSFRGG----YVNHVAHLSGALVGVVLVGLLSRIPSQPP 300
           ILGQFVIEKVMEAAQASTA SGSFRGG     VNHVAHLSGALVGV LV LLSRIPSQPP
Sbjct: 241 ILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPP 300

Query: 301 -DQDASALHRKGR 302
            DQDAS LHRK R
Sbjct: 301 DDQDASTLHRKVR 307

[Close]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL
Match: A0A6J1CNP9 (rhomboid-like protein 11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012689 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.9e-131
Identity = 258/311 (82.96%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 2   QLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPLQFSN-- 61
           QLQ  QLHG R+ KP GL K++P  SISRLSSF      SSSSLRFP  L HPL  S+  
Sbjct: 3   QLQ-SQLHGFRLSKPCGLSKRIPMASISRLSSF------SSSSLRFPSLLFHPLSLSHSV 62

Query: 62  -----VLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIG 121
                VLRL ARSVAAKP++MCKMND+DLISQLELGK +QSRK EKRVNGIFWIILLNIG
Sbjct: 63  ARLPYVLRLRARSVAAKPVSMCKMNDSDLISQLELGKPVQSRKPEKRVNGIFWIILLNIG 122

Query: 122 VYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG 181
           +YVADHIF+VRGI +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG
Sbjct: 123 IYVADHIFQVRGIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG 182

Query: 182 NFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI 241
           NFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI
Sbjct: 183 NFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI 242

Query: 242 LGQFVIEKVMEAAQASTAFSGSFRGGY----VNHVAHLSGALVGVVLVGLLSRIPSQPPD 301
           LGQFVIEKVMEAAQASTA SGSFRGGY    VNHVAHLSGALVGVVLV LLSRIPS PPD
Sbjct: 243 LGQFVIEKVMEAAQASTALSGSFRGGYSLQNVNHVAHLSGALVGVVLVWLLSRIPS-PPD 302

[Close]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL
Match: A0A5D3E659 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006290 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 253/309 (81.88%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 1   MQLQLQ--QLHGGRILKPRGLC-KQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL-Q 60
           MQ QLQ  QLHGGRI KP  L   QMP TSIS  SSF+       +SLRFP P  H L Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTL------TSLRFPSPFFHSLPQ 60

Query: 61  FSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTAFSGSFRGGY----VNHVAHLSGALVGVVLVGLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTA SGSFRGG+    VNHVAHLSGALVGV+LV LLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASALHRKGR 302
           ASALHRKGR
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL
Match: A0A1S3CQS6 (rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 253/309 (81.88%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 1   MQLQLQ--QLHGGRILKPRGLC-KQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL-Q 60
           MQ QLQ  QLHGGRI KP  L   QMP TSIS  SSF+       +SLRFP P  H L Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTL------TSLRFPSPFFHSLPQ 60

Query: 61  FSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTAFSGSFRGGY----VNHVAHLSGALVGVVLVGLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTA SGSFRGG+    VNHVAHLSGALVGV+LV LLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASALHRKGR 302
           ASALHRKGR
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Lcy12g015910 vs. NCBI nr
Match: XP_023524317.1 (rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.7 bits (1288), Expect = 8.5e-138
Identity = 268/312 (85.90%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL----- 60
           MQ +LQQLHG RILKPRGL +QM TTSI+ LSSF      SSSSLRF  PL HPL     
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSSF------SSSSLRFSSPLFHPLSSSLS 60

Query: 61  --QFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNI 120
             QFSNVLRL ARS AAKPIAMCKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNI
Sbjct: 61  VAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNI 120

Query: 121 GVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180
           GVYVADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE
Sbjct: 121 GVYVADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180

Query: 181 GNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240
           GNFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL
Sbjct: 181 GNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240

Query: 241 ILGQFVIEKVMEAAQASTAFSGSFRGG----YVNHVAHLSGALVGVVLVGLLSRIPSQPP 300
           ILGQFVIEKVMEAAQASTA SGSFRGG     VNHVAHLSGALVGVVLV LLSRIPSQPP
Sbjct: 241 ILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP 300

Query: 301 DQDASALHRKGR 302
           DQDAS LHRK R
Sbjct: 301 DQDASTLHRKVR 306

[Close]

BLAST of Lcy12g015910 vs. NCBI nr
Match: XP_022981184.1 (rhomboid-like protein 11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 498.8 bits (1283), Expect = 3.2e-137
Identity = 267/312 (85.58%), Postives = 275/312 (88.14%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL----- 60
           MQ +LQQLHG RILKPRGL +QM TTSI+ LS F      SSSSLRF  PL HPL     
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRF------SSSSLRFSSPLFHPLSSSIS 60

Query: 61  --QFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNI 120
             QFSNVLRL ARS AAKPIAMCKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNI
Sbjct: 61  VAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNI 120

Query: 121 GVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180
           GVYVADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE
Sbjct: 121 GVYVADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180

Query: 181 GNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240
           GNFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL
Sbjct: 181 GNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240

Query: 241 ILGQFVIEKVMEAAQASTAFSGSFRGG----YVNHVAHLSGALVGVVLVGLLSRIPSQPP 300
           ILGQFVIEKVMEAAQASTA SGSFRGG     VNHVAHLSGALVGVVLV LLSRIPSQPP
Sbjct: 241 ILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP 300

Query: 301 DQDASALHRKGR 302
           DQDAS LHRK R
Sbjct: 301 DQDASTLHRKVR 306

[Close]

BLAST of Lcy12g015910 vs. NCBI nr
Match: XP_022940340.1 (rhomboid-like protein 11, chloroplastic [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 3.0e-135
Identity = 266/313 (84.98%), Postives = 274/313 (87.54%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL----- 60
           MQ +LQQLHG RILKPRGL +QM TTSI+ LS F      SSSSLRF  PL HPL     
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRF------SSSSLRFSSPLFHPLSASLS 60

Query: 61  --QFSNVLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNI 120
             QFSNVLRL ARS AAKPIAMCKMNDADLISQLELGK LQ+RK EKRVNGIFWIILLNI
Sbjct: 61  VAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNI 120

Query: 121 GVYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180
           GVYVADHIF+VR I +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE
Sbjct: 121 GVYVADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEE 180

Query: 181 GNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240
           GNFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL
Sbjct: 181 GNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVL 240

Query: 241 ILGQFVIEKVMEAAQASTAFSGSFRGG----YVNHVAHLSGALVGVVLVGLLSRIPSQPP 300
           ILGQFVIEKVMEAAQASTA SGSFRGG     VNHVAHLSGALVGV LV LLSRIPSQPP
Sbjct: 241 ILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPP 300

Query: 301 -DQDASALHRKGR 302
            DQDAS LHRK R
Sbjct: 301 DDQDASTLHRKVR 307

[Close]

BLAST of Lcy12g015910 vs. NCBI nr
Match: XP_038896989.1 (rhomboid-like protein 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 480.3 bits (1235), Expect = 1.2e-131
Identity = 254/305 (83.28%), Postives = 268/305 (87.87%), Query Frame = 0


Query: 1   MQLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPL-QFSN 60
           MQLQLQQLHG RI KP  LCKQMP TSIS LSSF+ +S S  S L  P+   H L +FS+
Sbjct: 1   MQLQLQQLHGCRISKPHSLCKQMPMTSISLLSSFTLTSFSLPSPLFHPFSSSHSLPRFSD 60

Query: 61  VLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIGVYVAD 120
           VLRL  RSV AKPIAMCKMNDADLISQLELGK LQ+RK E+RVNGIFWIILLNIG+YVAD
Sbjct: 61  VLRLRTRSVCAKPIAMCKMNDADLISQLELGKPLQNRKPERRVNGIFWIILLNIGIYVAD 120

Query: 121 HIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIF+VR I  LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKL+EEEEGNFALW
Sbjct: 121 HIFQVRSIGVLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLLEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTAFSGSFRGGY----VNHVAHLSGALVGVVLVGLLSRIPSQPPDQDASA 300
           IEKVMEAAQASTA SGSFRGG+    VNHVAHLSGALVGV+LV LLSRIPS   DQDAS 
Sbjct: 241 IEKVMEAAQASTALSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSPSHDQDAST 300

[Close]

BLAST of Lcy12g015910 vs. NCBI nr
Match: XP_022142618.1 (rhomboid-like protein 11, chloroplastic [Momordica charantia])

HSP 1 Score: 478.0 bits (1229), Expect = 5.9e-131
Identity = 258/311 (82.96%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 2   QLQLQQLHGGRILKPRGLCKQMPTTSISRLSSFSFSSSSSSSSLRFPYPLIHPLQFSN-- 61
           QLQ  QLHG R+ KP GL K++P  SISRLSSF      SSSSLRFP  L HPL  S+  
Sbjct: 3   QLQ-SQLHGFRLSKPCGLSKRIPMASISRLSSF------SSSSLRFPSLLFHPLSLSHSV 62

Query: 62  -----VLRLPARSVAAKPIAMCKMNDADLISQLELGKSLQSRKQEKRVNGIFWIILLNIG 121
                VLRL ARSVAAKP++MCKMND+DLISQLELGK +QSRK EKRVNGIFWIILLNIG
Sbjct: 63  ARLPYVLRLRARSVAAKPVSMCKMNDSDLISQLELGKPVQSRKPEKRVNGIFWIILLNIG 122

Query: 122 VYVADHIFKVRGIESLYLFHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG 181
           +YVADHIF+VRGI +LYL+HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG
Sbjct: 123 IYVADHIFQVRGIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEG 182

Query: 182 NFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI 241
           NFALWLSYILTGVGANIVSWLILP+NAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI
Sbjct: 183 NFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLI 242

Query: 242 LGQFVIEKVMEAAQASTAFSGSFRGGY----VNHVAHLSGALVGVVLVGLLSRIPSQPPD 301
           LGQFVIEKVMEAAQASTA SGSFRGGY    VNHVAHLSGALVGVVLV LLSRIPS PPD
Sbjct: 243 LGQFVIEKVMEAAQASTALSGSFRGGYSLQNVNHVAHLSGALVGVVLVWLLSRIPS-PPD 302

[Close]

BLAST of Lcy12g015910 vs. TAIR 10
Match: AT5G25752.1 (rhomboid-like protein 11 )

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-96
Identity = 181/272 (66.54%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 39  SSSSSSLRFPYPLIH--------------PLQFSNVLRLPARSVAAKPIAMCKMNDADLI 98
           S   SSLRF +P +H              PLQF  +         ++    C+ + +D+ 
Sbjct: 11  SLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPL-------TVSRSQITCRFSQSDIT 70

Query: 99  SQLELGKSLQSRKQEKRVNGIFWIILLNIGVYVADHIFKVRGIESLYLFHNRPAWYQFFT 158
            Q EL K+  +RK +KR NGIFWIIL+N+G+Y+ADH F+VRGI+SLYL+HN PAWYQF T
Sbjct: 71  PQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVT 130

Query: 159 ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPKNAVSV 218
           ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LP+NAVSV
Sbjct: 131 ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSV 190

Query: 219 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTAFSGSFRGGY--- 278
           GASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS   SG+  GGY   
Sbjct: 191 GASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQ 250

Query: 279 -VNHVAHLSGALVGVVLVGLLSRIPSQPPDQD 293
            VNH+AHLSGALVGVVLV LLS+ PS   DQD
Sbjct: 251 TVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of Lcy12g015910 vs. TAIR 10
Match: AT5G25640.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 162 LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPKNAVSVGASGAVFGLFTISVLVK 221
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 222 MSWDWRKILEVLILGQFVIEKVMEA 247
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of Lcy12g015910 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-07
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 140 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPK 199
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L K
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 200 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 259
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLP------ 217

Query: 260 FRGGYVNHVAHLSGALVGVVLVGLLSRIP 286
               +V++ AH+ G L G  L  +L   P
Sbjct: 218 ----WVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of Lcy12g015910 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-07
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 140 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPK 199
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L K
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 200 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 259
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLP------ 217

Query: 260 FRGGYVNHVAHLSGALVGVVLVGLLSRIP 286
               +V++ AH+ G L G  L  +L   P
Sbjct: 218 ----WVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of Lcy12g015910 vs. TAIR 10
Match: AT1G12750.3 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-07
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 140 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPK 199
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L K
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 200 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTAFSGS 259
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I   +            
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLP------ 217

Query: 260 FRGGYVNHVAHLSGALVGVVLVGLLSRIP 286
               +V++ AH+ G L G  L  +L   P
Sbjct: 218 ----WVDNFAHIGGLLTGFCLGFILLMQP 234

The following BLAST results are available for this feature:

BLAST of Lcy12g015910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MB5	1.4e-95	66.54	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11...	[more]
Q8VZ48	4.7e-06	30.87	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
Q9CAN1	1.1e-05	31.73	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
P96617	1.4e-05	28.37	Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
Q0WQX7	1.8e-05	30.77	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]

BLAST of Lcy12g015910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J179	1.6e-137	85.58	rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]
A0A6J1FQ99	1.5e-135	84.98	rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CNP9	2.9e-131	82.96	rhomboid-like protein 11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3E659	1.7e-128	81.88	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CQS6	1.7e-128	81.88	rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Lcy12g015910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524317.1	8.5e-138	85.90	rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022981184.1	3.2e-137	85.58	rhomboid-like protein 11, chloroplastic [Cucurbita maxima]	[more]
XP_022940340.1	3.0e-135	84.98	rhomboid-like protein 11, chloroplastic [Cucurbita moschata]	[more]
XP_038896989.1	1.2e-131	83.28	rhomboid-like protein 11, chloroplastic [Benincasa hispida]	[more]
XP_022142618.1	5.9e-131	82.96	rhomboid-like protein 11, chloroplastic [Momordica charantia]	[more]

BLAST of Lcy12g015910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25752.1	1.0e-96	66.54	rhomboid-like protein 11	[more]
AT5G25640.1	2.5e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G12750.1	3.4e-07	30.87	RHOMBOID-like protein 6	[more]
AT1G12750.2	3.4e-07	30.87	RHOMBOID-like protein 6	[more]
AT1G12750.3	3.4e-07	30.87	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 136..283 e-value: 7.1E-28 score: 97.5
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 97..286 e-value: 3.3E-33 score: 116.9
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 102..286
None	No IPR available	PANTHER	PTHR43066:SF5	RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 42..296
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 42..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g015910.1	Lcy12g015910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity