Lcy12g015140 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g015140
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	XIAP-associated factor 1-like
Location	Chr12: 43095614 .. 43099379 (+)
RNA-Seq Expression	Lcy12g015140
Synteny	Lcy12g015140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACATTTTGTTTTGTTTTGTTTTAGTAAAGGGTGGGTGGAGGTGGGTCGCCTCCGTTCGTGAAAGTCATTCACTTGATTACAAGTAGTTGAATCGAAGTCGGTCGGTCTTCGTTCGCGAAACGTTATCGATCCACGGCTAGAATTTCTAGGTAAATTTTCATTCAATTTCAGAGTCTCATCAATTTCTTCTCTTCCTATTTGATCTCTCCTCGAATTTCTCTGCAGCGCTTCAATTCTCGTTCCCCTAATTTTGCCATCATCGGACCTTCCAACGACGATCCTCTGCTTTCCGTCCAATCCGTTCCGATGGCGGTTGCATCCGAAGAGGCCACAAGCATATGCACTCACTGGTATTGTAATTCTGGATGGATCGAGAACTTCTCTGTTTTTCGATGAGAGATCGCTTGAGGATTTTGTCGATTTCAATTTCTCTAATTTATGGCGTTGATTTTTTGAATTGTTTTTTATGCGAAAATTGCTTTTTCAATCGTGATTGCCGTTTGTGATTGTTTTGGAATTTCGGTTTCTTCCGTTCAATTTCGTCCGAGATTGGTTAGGTTTGGGGGATAGAGCTCTTATCCAGTTTTGACATGAATCTGCTGGGGCTGGATCGTTGTTTTCTTTTATATTTTAATTTGTAAAGTGAAATATTAGGTAAGAATTTTGAATTTCCCTGATTATCTTACCTTCTTCGTGATGAATTTTGCTGTCTGATGATCCCCTTCCTAGAAATTGTTTTTCTATAGTGATGATTTGAATGATGATTGCTTTGCTTTCTCCATTTACAGCGGCAGAGCCATTCCTTCGTCAAATATTGATCTGCATTCTGTTCATTGCGTGCGGAACTTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTTCTGAACACCCATGCTCCTGTACGATGATTTTTCCTTCAAACTTAGTTAATACCATGGCACTTTGAAATGCTTGAATAATACCTGAGGGTTATTATGTTTTCTTTAGATTTCTTTGAAAAGATTTTGTATCGTACAGATTCTCTCTTGTCTATTTTAGGCAGTTACACTACTGTCTTTGAATAAGAATTAGTGGTACTATTCTTGATTATTGGAATTTGAAGTTTTTATGGCATTGTATTTGGACAGGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAGCGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCCCAAAGGATTGTCACTTGTGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCTGAGCATCAGGTATGTTAAAGAATGATTTGAAGTTAAATGAAAACTTCTAAAGAGATCTTAATGTTATACCTTTGGTGGTTCGAATTTATAGGAAGTATGTGGTAACCGGACAGAACTTTGTCATCTGTGTCGCCGATATATAAGACTACGAGAAAGATATAGCCATGAGAATAATTGCAAGGGTGTTGCAGCAGCAGAGAACATAGCAGAATCTTCCAGGTAGATCAACCTGTTATTTTTGAAATAGTCAACTTGTTTTATTCTGTTAACTGCTATTTTCAGATAGTTCAGATTTTTATTGGTAGTTAATTAGTTATAGTGAAGCCTCTCTAGACTGTCAATTTATGATACTACATAAGCATTTGCATTTTTTTTTCCTTTTTTTTTTTTAATATCCGTAAGTGTCTGGGCCAACTTGCGCGCACCACGACTATCTCACGGGACAACCGCCTGACTCTAAAACATTTGCATATTTTGATATATGGATATCCGTTATTAATGGGAACACCTGTCTAAAGCCTAAATTAGTGGGAATTCTTTTTCCCTTGGGTAGTGCTTGTTTTAAGATTTTGTACAGTTGCCCAATGGTTGGCTTTCTTATTGTGGATTTGGAAAACCATGGAAATTCTACATACCCTCTTCCATGGATTTTTTTATGCCTTCTCTTTTAATATCATATATGAATTGAAATCAATCAATTAGTGTTGATCAATTAATTATTTAACATGTCTTAGTATTTATTTTTTAAAATAAGATGTTCGAACTCTTCAGTTTTAGTCAATCTTCACTTATCAAGGAAAAATCAAACTTGTTCACAACTATAGAGGAGTTCCATGGATTGATTTTAGAGAACAACACACGTATCCTTTATTCCTATGGATATCTATCAGCATTTTTTTGTTTGAACTGACATAGTTATCCAATATTTCTGAACTTTTCATACTCGATCATTTCCTTATAAAACAAATTTTAACCAAACAACAATTTATATTTTCGAATTATATTTTTTTGTTTTTCTAAACTAAATCTCCACTGCACGAGTTAATAACGATTTTGTTTTCTGTTGAGTTGAAGTTATTGTCTAGATGATGTCTTATTCTCCTATTAACTTCAGTTAGCTACAAAGTTCAAGTGCTATACTTGAAACTTGCATTGTTTTCGTTGGAAAACACCCCCTTGACCATGTGTAAACTTGAACTTTGACAATAAACCGAATCTAGTACCATGTAATTTGCTCATATTCCTCTCTTCCTTTCTCTCAATGGAGTTGTCTCCATTGGATTGGTCAGCATTGTTCCATGGTGCGCCAATGTTCCTGTGCTGCCATTAAGATTTAGCTTCCAATTTAACCATGGAGGTTGATTAGGAAACTTTTCAAATTTATAGATATACCAGATTGAATGAATTTATAGTATTTGGAATTGCCTGGTACGTCCATTAACCTTTTTCCCCTTCTCTTTTCTGTCTGTCTGCTTTTTGGAGGGTGGGAGTGTTACTCATTTAAATCACCTCGTTTCATATGTCATGTGATCACTTTAGCTTGATTTGGTGAACATTGCGCAGTGTATTTTGGATCTTTTAGCCTGACATTCGCTTCAGTTTTCGTTGAATAATTAAATCTCATATACATTTAGGCATCAGCTTTCATGTTAGTAGTAGGAGCATGCCAAACCCTTGATTTATTTTCGCAGTTCTAGTATTTCATATATTCTGTTTGTTATCTTCTAATAATGTGTGCAATCATTCTAAACTGTATCTGAAGGGATGTGGGGGCAGCACCAGAAAGAGATCAAGCTAGAGATCGAGGAGCTCGAAGAAGACAGCCACAGGAGTTTTCCACCCGACGTCTTATATTCACCATCGCAATAACAGGTATTGCCGTTCTTTTGGGATCCCTATTTTTCCAGAGAAAGGCCGAGAACAACGTCGTACACTGATTGCTGGTGAGCTTACCACAGATCCTCCTACATAGTGGAGAATGTTCTCCATGTAAAAAAAACGAAAAAAATTCCTTGTTTAAAACGTAATAACTTCCATTTTTCTGTACTAAGAATATTTAGATAACTACTGTAAGCTTACTCATGGGCGGAGAATTTGATGATGGCCTGATGGCTCCACCCCTTTGTTCTTGGGGGTTTTCGCTTGGGCCTTGAGTAAATTAATGTTGGTTGGAAATACATGTGGGAAGAAGAAGGCAATTTAGTTTACAACTATAAATCTAGCAATTTTTTTACTTTACAATCTATTGTTGCCATCATGTGAAGTGGTTTTTCAATTTACTTTCGACCAGAGAAATAGATAACACTTGCCAATTTGAGCATAAGGTACCTGTGGTTTCATGTGAAATGGTTTTTATTTTTTAAATAAATTACAACACTTATATTTTATTATATGTCTAGAGAAAAATTATTAAATGTTGCTATTTCTTAACAATCCTTCCATGTAGGCTTTTATTATTCACCACAGTTTTTCACAATCTGAG

mRNA sequence

CGAACATTTTGTTTTGTTTTGTTTTAGTAAAGGGTGGGTGGAGGTGGGTCGCCTCCGTTCGTGAAAGTCATTCACTTGATTACAAGTAGTTGAATCGAAGTCGGTCGGTCTTCGTTCGCGAAACGTTATCGATCCACGGCTAGAATTTCTAGCGCTTCAATTCTCGTTCCCCTAATTTTGCCATCATCGGACCTTCCAACGACGATCCTCTGCTTTCCGTCCAATCCGTTCCGATGGCGGTTGCATCCGAAGAGGCCACAAGCATATGCACTCACTGCGGCAGAGCCATTCCTTCGTCAAATATTGATCTGCATTCTGTTCATTGCGTGCGGAACTTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTTCTGAACACCCATGCTCCTGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAGCGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCCCAAAGGATTGTCACTTGTGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACAGAACTTTGTCATCTGTGTCGCCGATATATAAGACTACGAGAAAGATATAGCCATGAGAATAATTGCAAGGGTGTTGCAGCAGCAGAGAACATAGCAGAATCTTCCAGGGATGTGGGGGCAGCACCAGAAAGAGATCAAGCTAGAGATCGAGGAGCTCGAAGAAGACAGCCACAGGAGTTTTCCACCCGACGTCTTATATTCACCATCGCAATAACAGGTATTGCCGTTCTTTTGGGATCCCTATTTTTCCAGAGAAAGGCCGAGAACAACGTCGTACACTGATTGCTGGTGAGCTTACCACAGATCCTCCTACATAGTGGAGAATGTTCTCCATGTAAAAAAAACGAAAAAAATTCCTTGTTTAAAACGTAATAACTTCCATTTTTCTGTACTAAGAATATTTAGATAACTACTGTAAGCTTACTCATGGGCGGAGAATTTGATGATGGCCTGATGGCTCCACCCCTTTGTTCTTGGGGGTTTTCGCTTGGGCCTTGAGTAAATTAATGTTGGTTGGAAATACATGTGGGAAGAAGAAGGCAATTTAGTTTACAACTATAAATCTAGCAATTTTTTTACTTTACAATCTATTGTTGCCATCATGTGAAGTGGTTTTTCAATTTACTTTCGACCAGAGAAATAGATAACACTTGCCAATTTGAGCATAAGGTACCTGTGGTTTCATGTGAAATGGTTTTTATTTTTTAAATAAATTACAACACTTATATTTTATTATATGTCTAGAGAAAAATTATTAAATGTTGCTATTTCTTAACAATCCTTCCATGTAGGCTTTTATTATTCACCACAGTTTTTCACAATCTGAG

Coding sequence (CDS)

ATGGCGGTTGCATCCGAAGAGGCCACAAGCATATGCACTCACTGCGGCAGAGCCATTCCTTCGTCAAATATTGATCTGCATTCTGTTCATTGCGTGCGGAACTTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTTCTGAACACCCATGCTCCTGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAGCGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCCCAAAGGATTGTCACTTGTGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACAGAACTTTGTCATCTGTGTCGCCGATATATAAGACTACGAGAAAGATATAGCCATGAGAATAATTGCAAGGGTGTTGCAGCAGCAGAGAACATAGCAGAATCTTCCAGGGATGTGGGGGCAGCACCAGAAAGAGATCAAGCTAGAGATCGAGGAGCTCGAAGAAGACAGCCACAGGAGTTTTCCACCCGACGTCTTATATTCACCATCGCAATAACAGGTATTGCCGTTCTTTTGGGATCCCTATTTTTCCAGAGAAAGGCCGAGAACAACGTCGTACACTGA

Protein sequence

MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFFQRKAENNVVH

Homology

[Close]

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot
Match: Q4R970 (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-23
Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 6   EEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSL 65
           ++ T +C +C + IP  N  +H +HC RN+  C IC +  PK   E H    H  V+C  
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 126

Query: 126 RERYSHENNC 136
           ++  +H   C
Sbjct: 127 KDLKTHPEVC 135

[Close]

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot
Match: Q6GPH4 (XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 0


Query: 10  SICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSET 69
           S+C +C R + S+N  LH  +C+R L  C  C + VPK   EEH    H  V C++C ++
Sbjct: 6   SVCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQS 65

Query: 70  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERY 129
           M++  L  HK   C +R V C+FC+  +    L  H+  CG+RTELC  C ++I  R   
Sbjct: 66  MQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLA 125

Query: 130 SHENNCKGVAAAENIAESSRDVGAAPERD 159
            H + C+   A     E      +APER+
Sbjct: 126 QHRDVCRSEQAQLGKGERI----SAPERE 150

[Close]

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot
Match: O14545 (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRAFD1 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 6   EEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSL 65
           ++ T +C +C + IP  N  +H +HC RN+  C  C +  PK   E H    H  V+C  
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 126

Query: 126 RERYSHENNC 136
           ++  +H   C
Sbjct: 127 KDLKTHPEVC 135

[Close]

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot
Match: Q3UDK1 (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Trafd1 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 6   EEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSL 65
           ++A+ +C +C + IP  N  +H +HC RN+  C +C +  PK   + H    H  V+C  
Sbjct: 7   DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+  L  H    CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLV 126

Query: 126 RERYSHENNC 136
           +E  +H   C
Sbjct: 127 KELKTHPEVC 135

[Close]

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot
Match: Q58D05 (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-22
Identity = 43/131 (32.82%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 5   SEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCS 64
           +++ T +C +C + IP  N  +H +HC RN+  C +C +  PK   E H    H  V+C 
Sbjct: 6   NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTCK 65

Query: 65  LCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIR 124
            C++ +E+  L  H+   CP R+  C+ C+  L  + L +H++ CG RTELC  C R + 
Sbjct: 66  -CNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVL 125

Query: 125 LRERYSHENNC 136
           +++  +H   C
Sbjct: 126 VKDLKTHPEVC 135

[Close]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL
Match: A0A6J1IKG6 (XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.3e-110
Identity = 192/206 (93.20%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGVAAA+ +AESSRDVGAAPERDQ RDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKAE+N++H
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL
Match: A0A6J1F858 (XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.6e-110
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGV AA+ +AESSRDVGAAPERDQ RDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKAE+N+VH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIVH 206

[Close]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL
Match: A0A6J1CBB2 (XIAP-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111010083 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.6e-107
Identity = 192/206 (93.20%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MA+ASEE TSIC HCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKR AEEHFLNTHAP
Sbjct: 1   MAIASEETTSICNHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRQAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILA HKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILATHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSH+NNCKGVAAA+NIAESSRDVG APER++ RD GARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHDNNCKGVAAADNIAESSRDVGVAPERER-RDHGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKA N+VVH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAGNDVVH 205

[Close]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL
Match: A0A1S3CRX9 (XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107
Identity = 192/207 (92.75%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERD-QARDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  A+NIAESSRDVGAAPERD QARDRGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAENNVVH 207
           FTIAITGIAVLLGSLFFQRK+E+N+VH
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL
Match: A0A5D3E5M7 (XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005430 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107
Identity = 192/207 (92.75%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERD-QARDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  A+NIAESSRDVGAAPERD QARDRGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAENNVVH 207
           FTIAITGIAVLLGSLFFQRK+E+N+VH
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Lcy12g015140 vs. NCBI nr
Match: XP_022975863.1 (XIAP-associated factor 1-like [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 8.8e-110
Identity = 192/206 (93.20%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGVAAA+ +AESSRDVGAAPERDQ RDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKAE+N++H
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Lcy12g015140 vs. NCBI nr
Match: XP_022936676.1 (XIAP-associated factor 1-like [Cucurbita moschata])

HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-109
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGV AA+ +AESSRDVGAAPERDQ RDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKAE+N+VH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIVH 206

[Close]

BLAST of Lcy12g015140 vs. NCBI nr
Match: XP_023534901.1 (XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-associated factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024586.1 XIAP-associated factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109
Identity = 191/206 (92.72%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGV AA+ +AESSRDVGAAPERDQ RDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKAE+N++H
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Lcy12g015140 vs. NCBI nr
Match: XP_038897923.1 (XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated factor 1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 9.7e-109
Identity = 197/207 (95.17%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MAVASEE TSIC HCGR IPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRHIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERD-QARDRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNCKGV AA+NIAESSRDVGAAPERD QARDR ARRRQP EFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVVAADNIAESSRDVGAAPERDHQARDRDARRRQPPEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAENNVVH 207
           FTIAITGIAVLLGSLF QRKAE+NVVH
Sbjct: 181 FTIAITGIAVLLGSLFLQRKAESNVVH 207

[Close]

BLAST of Lcy12g015140 vs. NCBI nr
Match: XP_022139085.1 (XIAP-associated factor 1 [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 5.3e-107
Identity = 192/206 (93.20%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           MA+ASEE TSIC HCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKR AEEHFLNTHAP
Sbjct: 1   MAIASEETTSICNHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRQAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILA HKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILATHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSH+NNCKGVAAA+NIAESSRDVG APER++ RD GARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHDNNCKGVAAADNIAESSRDVGVAPERER-RDHGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAENNVVH 207
           TIAITGIAVLLGSLFFQRKA N+VVH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAGNDVVH 205

[Close]

BLAST of Lcy12g015140 vs. TAIR 10
Match: AT1G09920.1 (TRAF-type zinc finger-related )

HSP 1 Score: 280.8 bits (717), Expect = 8.8e-76
Identity = 134/201 (66.67%), Postives = 152/201 (75.62%), Query Frame = 0


Query: 1   MAVASEEATSICTHCGRAIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60
           M  A+ E T +C HC R IPS NIDLH VHC RNLEKCKICGDMVPK+HAEEH+LNTHAP
Sbjct: 1   METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120
           ++CS+C ET+ER+I   HKGE CP+RIVTCEFCEFPLPA+DLAEHQEVCGNRTELC+ C 
Sbjct: 61  IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120

Query: 121 RYIRLRERYSHENNCKGVAAAENIAESSRDVGAAPERDQARDRGARRRQPQEFSTRRLIF 180
            Y+RLRERY+HE  C G        ESSR +  A E D     G RRR     S +RL F
Sbjct: 121 SYVRLRERYNHETKCPGT------VESSRRIPRAAEGD---GNGRRRRDGNGVSNKRLFF 180

Query: 181 TIAITGIAVLLGSLFFQRKAE 202
           TIAITGIAV++GSLFFQRK E
Sbjct: 181 TIAITGIAVIIGSLFFQRKPE 192

[Close]

BLAST of Lcy12g015140 vs. TAIR 10
Match: AT4G15420.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 46/160 (28.75%), Postives = 74/160 (46.25%), Query Frame = 0


Query: 4   ASEEATSICTHCGRAIPSSNIDLHSVHCVR--------------------NLEKCKICGD 63
           +S+  T  C +C  +IPS +I LH V+C R                    N   C+ CG 
Sbjct: 395 SSDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGK 454

Query: 64  MVPKRHAEEHFLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFC----EFPLPA 123
            +     E+H    H P++C  C   +E++ +  H+G++CP R++ C FC    E    A
Sbjct: 455 ALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSA 514

Query: 124 ID-------LAEHQEVCGNRTELCHLCRRYIRLRERYSHE 133
            D       ++EH+  CG+RT  C  C R + L++   H+
Sbjct: 515 ADTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQ 553

The following BLAST results are available for this feature:

BLAST of Lcy12g015140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4R970	2.9e-23	34.62	TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541...	[more]
Q6GPH4	3.8e-23	35.57	XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1	[more]
O14545	1.1e-22	33.85	TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRA...	[more]
Q3UDK1	1.9e-22	33.85	TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tr...	[more]
Q58D05	2.5e-22	32.82	TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD...	[more]

BLAST of Lcy12g015140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKG6	4.3e-110	93.20	XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 S...	[more]
A0A6J1F858	5.6e-110	93.20	XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4...	[more]
A0A6J1CBB2	2.6e-107	93.20	XIAP-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111010083 PE=4 SV=...	[more]
A0A1S3CRX9	3.4e-107	92.75	XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1	[more]
A0A5D3E5M7	3.4e-107	92.75	XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Lcy12g015140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975863.1	8.8e-110	93.20	XIAP-associated factor 1-like [Cucurbita maxima]	[more]
XP_022936676.1	1.1e-109	93.20	XIAP-associated factor 1-like [Cucurbita moschata]	[more]
XP_023534901.1	2.6e-109	92.72	XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-as...	[more]
XP_038897923.1	9.7e-109	95.17	XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated fac...	[more]
XP_022139085.1	5.3e-107	93.20	XIAP-associated factor 1 [Momordica charantia]	[more]

BLAST of Lcy12g015140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09920.1	8.8e-76	66.67	TRAF-type zinc finger-related	[more]
AT4G15420.1	1.8e-15	28.75	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..57 e-value: 1.6E-5 score: 26.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 58..111 e-value: 2.2E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..169
None	No IPR available	PANTHER	PTHR16295:SF25	XIAP-ASSOCIATED FACTOR 1-LIKE	coord: 1..205
None	No IPR available	PANTHER	PTHR16295	TRAF-TYPE ZINC FINGER PROTEIN-RELATED	coord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g015140.1	Lcy12g015140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0008270	zinc ion binding