Lcy12g015090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g015090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr12: 43041904 .. 43042881 (-)
RNA-Seq Expression	Lcy12g015090
Synteny	Lcy12g015090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCTCTGTCACTGTCAGTCGCGCCACTCTCTTTTCCTCTGCCCTCTCGCTTGAATCCAAAATCTCTCGTTTATTATTCCAATTTGGCCTTCAATTCCTTTCTCTACCACACACTTGTATTGTATCCTCTGAAGATTTTCTTGCTTTCCAAACAGAAATTAAGATTTTTCTTTTTTCTTTTTTGGTTAAATTTTCTTAGAAATGGAGAAACCGGAGGGGCGAAAGAGCAGAGAAGAGATATTGTCGTGTTGGGGGCGTTTGAAGCGGAAGCTTTTGTTGATGAGAAGAGAGGGAAATAATCCGTGTATTGGAGAGACGAAGACATTGAATGGAGGATTCAGATACGATCCATTGAGCTACGCTCAGAACTTCGATGAGGGATTGGATTACGGTGATGAAGAAGGACGATATCGAGGTTTTTCTGCAAGATATGCTTCTGCTTCTTCTTCCAAACCGCTTGCTAAGAAGAAGTAGAATACAAGGATTTGGAAATTTCGCATATGGTAATTTTAATCTAATGAGCTTCTTTTTTTTTTTTAAGATATATATTTATATTCTCTCTTCTTCTTCTTTTATCTTTTTTTTTTTTTTTTTTTTTTACAGATGTCTTTTTATATATGATGAAATATACAGAAGGAATTACAAGGGGTGTGGTATATTTGTAAGAGAAAGAGATAAAAAAAAAAGGGGAGTTATCGGTTACGTATAGATTTTAATTTGACTATTGTGGAAAACATGTCCACTAATTTAGGGTTGCTGGACTTGAAATGCTTAGGATTTCATTGATAATAAGAGAGCATTGTGGGAAAGGCGATGCTGTAATTTTGATATTGATATAAAGTTTCAGTATTTAATAGTGTGAATAAAAGAAAGGTCATATTTAGTATTCTTCTTTGAAATCTTTTTAAGTTCAGCCAAATTGACAGTTGGGTCTTTTTTTTTTTTTTTCAACCAATTGACAGTTCTTTTTTTTTTT

mRNA sequence

TTCCTCTCTGTCACTGTCAGTCGCGCCACTCTCTTTTCCTCTGCCCTCTCGCTTGAATCCAAAATCTCTCGTTTATTATTCCAATTTGGCCTTCAATTCCTTTCTCTACCACACACTTGTATTGTATCCTCTGAAGATTTTCTTGCTTTCCAAACAGAAATTAAGATTTTTCTTTTTTCTTTTTTGGTTAAATTTTCTTAGAAATGGAGAAACCGGAGGGGCGAAAGAGCAGAGAAGAGATATTGTCGTGTTGGGGGCGTTTGAAGCGGAAGCTTTTGTTGATGAGAAGAGAGGGAAATAATCCGTGTATTGGAGAGACGAAGACATTGAATGGAGGATTCAGATACGATCCATTGAGCTACGCTCAGAACTTCGATGAGGGATTGGATTACGGTGATGAAGAAGGACGATATCGAGGTTTTTCTGCAAGATATGCTTCTGCTTCTTCTTCCAAACCGCTTGCTAAGAAGAAGTAGAATACAAGGATTTGGAAATTTCGCATATGATGTCTTTTTATATATGATGAAATATACAGAAGGAATTACAAGGGGTGTGGTATATTTGTAAGAGAAAGAGATAAAAAAAAAAGGGGAGTTATCGGTTACGTATAGATTTTAATTTGACTATTGTGGAAAACATGTCCACTAATTTAGGGTTGCTGGACTTGAAATGCTTAGGATTTCATTGATAATAAGAGAGCATTGTGGGAAAGGCGATGCTGTAATTTTGATATTGATATAAAGTTTCAGTATTTAATAGTGTGAATAAAAGAAAGGTCATATTTAGTATTCTTCTTTGAAATCTTTTTAAGTTCAGCCAAATTGACAGTTGGGTCTTTTTTTTTTTTTTTCAACCAATTGACAGTTCTTTTTTTTTTT

Coding sequence (CDS)

ATGGAGAAACCGGAGGGGCGAAAGAGCAGAGAAGAGATATTGTCGTGTTGGGGGCGTTTGAAGCGGAAGCTTTTGTTGATGAGAAGAGAGGGAAATAATCCGTGTATTGGAGAGACGAAGACATTGAATGGAGGATTCAGATACGATCCATTGAGCTACGCTCAGAACTTCGATGAGGGATTGGATTACGGTGATGAAGAAGGACGATATCGAGGTTTTTCTGCAAGATATGCTTCTGCTTCTTCTTCCAAACCGCTTGCTAAGAAGAAGTAG

Protein sequence

MEKPEGRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFDEGLDYGDEEGRYRGFSARYASASSSKPLAKKK

Homology

[Close]

BLAST of Lcy12g015090 vs. ExPASy TrEMBL
Match: A0A0A0LJR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.7e-13
Identity = 52/102 (50.98%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 1   MEKPEGRKSREEILSCWGRLKRKLLLMRREG--------NNPCI-GETKTLN----GGFR 60
           M+K E +K++EE +SCW RL+ K+L  ++EG        N  C+ GET  LN    G F+
Sbjct: 1   MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFK 60

Query: 61  YDPLSYAQNFDEGLDYGDEEGRYRGFSARYASASSSKPLAKK 90
           YD LSYA+NFDEGL   D EG +R FSARY  A  SKP AKK
Sbjct: 61  YDALSYAKNFDEGLANADGEGSFRSFSARY--AVPSKPPAKK 100

[Close]

BLAST of Lcy12g015090 vs. ExPASy TrEMBL
Match: A0A7N2RF56 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.9e-12
Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 1  MEKPEGRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKT---LNGGFRYDPLSYAQNF 60
          ME+    + +  +LSCWG LK KL   ++         TK+   L GGF YDPLSYAQNF
Sbjct: 1  MERTSSPRIKAGLLSCWGCLKLKLPWTQQRARRSTHTRTKSVDKLGGGFNYDPLSYAQNF 60

Query: 61 DEGLDYGDEEGRYRGFSARYASASSSKPLAKKK 91
          DEG D  DEE   RGFSAR+A+ SS  P  K++
Sbjct: 61 DEGWDEDDEEFAQRGFSARFAAPSSKSPGDKQQ 93

[Close]

BLAST of Lcy12g015090 vs. ExPASy TrEMBL
Match: K7KJ14 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G090800 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 47/86 (54.65%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MEKPE--GRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFD 60
          MEK    G K+    LSCWGRLK KL   +R      I       GGF+YDPLSYAQNFD
Sbjct: 1  MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTSTYKSI-------GGFKYDPLSYAQNFD 60

Query: 61 EGLDYGDEEGRYRGFSARYASASSSK 85
          EG    DEE  +RGFSARYA+ SS K
Sbjct: 61 EGWVEDDEESLHRGFSARYAAPSSHK 79

[Close]

BLAST of Lcy12g015090 vs. ExPASy TrEMBL
Match: A0A445KYI8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009209 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 47/86 (54.65%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MEKPE--GRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFD 60
          MEK    G K+    LSCWGRLK KL   +R      I       GGF+YDPLSYAQNFD
Sbjct: 13 MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTSTYKSI-------GGFKYDPLSYAQNFD 72

Query: 61 EGLDYGDEEGRYRGFSARYASASSSK 85
          EG    DEE  +RGFSARYA+ SS K
Sbjct: 73 EGWVEDDEESLHRGFSARYAAPSSHK 91

[Close]

BLAST of Lcy12g015090 vs. ExPASy TrEMBL
Match: A0A2N9FZI5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20116 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 45/81 (55.56%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 10 REEILSCWGRLKRKLLLMRREGNNPCIG-ETKTLNGGFRYDPLSYAQNFDEGLDYGDEEG 69
          ++  LSCWG  K KL   +R G +         L GGF YDPLSYAQNFDEG D  DEE 
Sbjct: 12 KKGFLSCWGCFKLKLPWAQRRGKSTNTRMRVSKLGGGFNYDPLSYAQNFDEGWDDDDEES 71

Query: 70 RYRGFSARYASASSSKPLAKK 90
           +RGFSARYA A SSK L  K
Sbjct: 72 SHRGFSARYA-APSSKSLGDK 91

[Close]

BLAST of Lcy12g015090 vs. NCBI nr
Match: KAG6608120.1 (hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 71/90 (78.89%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MEKPEGRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFDEG 60
          MEK EG+KS EE++SCWGRLK KLLLM+REGNNPCIG+TK LNGGFRYD LSYAQNFDEG
Sbjct: 1  MEKSEGQKSSEELVSCWGRLKLKLLLMKREGNNPCIGDTKPLNGGFRYDALSYAQNFDEG 60

Query: 61 LDYGDEEGRYRGFSARYASASSSKPLAKKK 91
          LD  DEE R RGFSARY SA  SKPL K K
Sbjct: 61 LDDEDEELRCRGFSARYVSA--SKPLPKNK 88

[Close]

BLAST of Lcy12g015090 vs. NCBI nr
Match: KGN60281.1 (hypothetical protein Csa_002688 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 9.7e-13
Identity = 52/102 (50.98%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 1   MEKPEGRKSREEILSCWGRLKRKLLLMRREG--------NNPCI-GETKTLN----GGFR 60
           M+K E +K++EE +SCW RL+ K+L  ++EG        N  C+ GET  LN    G F+
Sbjct: 1   MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFK 60

Query: 61  YDPLSYAQNFDEGLDYGDEEGRYRGFSARYASASSSKPLAKK 90
           YD LSYA+NFDEGL   D EG +R FSARY  A  SKP AKK
Sbjct: 61  YDALSYAKNFDEGLANADGEGSFRSFSARY--AVPSKPPAKK 100

[Close]

BLAST of Lcy12g015090 vs. NCBI nr
Match: KAG2698660.1 (hypothetical protein I3760_07G160100 [Carya illinoinensis] >KAG6705100.1 hypothetical protein I3842_07G165100 [Carya illinoinensis])

HSP 1 Score: 77.8 bits (190), Expect = 5.3e-11
Identity = 44/81 (54.32%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 10 REEILSCWGRLKRKLLLMRREGNNP-----CIGETKTLNGGFRYDPLSYAQNFDEGLDYG 69
          +E +LSCWGRLK KL   ++   +P      +G+   L G F+YDPLSYAQNFDEG D  
Sbjct: 3  KEGLLSCWGRLKLKLPWTQQRVRSPNTRSRVVGK---LGGRFKYDPLSYAQNFDEGWDDD 62

Query: 70 DEEGRYRGFSARYASASSSKP 86
          DEE   RGFSARYA+ SS  P
Sbjct: 63 DEEVYQRGFSARYAAPSSKPP 80

[Close]

BLAST of Lcy12g015090 vs. NCBI nr
Match: RZC15786.1 (hypothetical protein D0Y65_009209 [Glycine soja])

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-11
Identity = 47/86 (54.65%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MEKPE--GRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFD 60
          MEK    G K+    LSCWGRLK KL   +R      I       GGF+YDPLSYAQNFD
Sbjct: 13 MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTSTYKSI-------GGFKYDPLSYAQNFD 72

Query: 61 EGLDYGDEEGRYRGFSARYASASSSK 85
          EG    DEE  +RGFSARYA+ SS K
Sbjct: 73 EGWVEDDEESLHRGFSARYAAPSSHK 91

[Close]

BLAST of Lcy12g015090 vs. NCBI nr
Match: KAG5048643.1 (hypothetical protein JHK85_009746 [Glycine max] >KAG5065757.1 hypothetical protein JHK86_009488 [Glycine max] >KHN08230.1 hypothetical protein glysoja_017708 [Glycine soja] >KRH62169.1 hypothetical protein GLYMA_04G090800v4 [Glycine max])

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-11
Identity = 47/86 (54.65%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MEKPE--GRKSREEILSCWGRLKRKLLLMRREGNNPCIGETKTLNGGFRYDPLSYAQNFD 60
          MEK    G K+    LSCWGRLK KL   +R      I       GGF+YDPLSYAQNFD
Sbjct: 1  MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTSTYKSI-------GGFKYDPLSYAQNFD 60

Query: 61 EGLDYGDEEGRYRGFSARYASASSSK 85
          EG    DEE  +RGFSARYA+ SS K
Sbjct: 61 EGWVEDDEESLHRGFSARYAAPSSHK 79

The following BLAST results are available for this feature:

BLAST of Lcy12g015090 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g015090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJR5	4.7e-13	50.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1	[more]
A0A7N2RF56	8.9e-12	48.39	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
K7KJ14	3.4e-11	54.65	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G090800 PE=4 SV=1	[more]
A0A445KYI8	3.4e-11	54.65	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009209 PE=4 SV=1	[more]
A0A2N9FZI5	3.4e-11	55.56	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20116 PE=4 SV=1	[more]

BLAST of Lcy12g015090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608120.1	1.9e-29	78.89	hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN60281.1	9.7e-13	50.98	hypothetical protein Csa_002688 [Cucumis sativus]	[more]
KAG2698660.1	5.3e-11	54.32	hypothetical protein I3760_07G160100 [Carya illinoinensis] >KAG6705100.1 hypothe...	[more]
RZC15786.1	7.0e-11	54.65	hypothetical protein D0Y65_009209 [Glycine soja]	[more]
KAG5048643.1	7.0e-11	54.65	hypothetical protein JHK85_009746 [Glycine max] >KAG5065757.1 hypothetical prote...	[more]

BLAST of Lcy12g015090 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 7..84
None	No IPR available	PANTHER	PTHR33168:SF39	SUBFAMILY NOT NAMED	coord: 7..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g015090.1	Lcy12g015090.1	mRNA