Lcy12g014840 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g014840
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Profilin
Location	Chr12: 42760096 .. 42761468 (-)
RNA-Seq Expression	Lcy12g014840
Synteny	Lcy12g014840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGATATTGAAGGCAGCCGTCTCTCTGCCGCTGCGATCATTGGCCAAGACGGCACTGTTGGGCTAAGAGCTCCAGTTTTCCTCAGGTCTAATACTTCTTCTTTATTCTTCATCTTTTCTTTTGGAACTTGTTCTCTGTTGCTTTGAATCTCGTTCTCATATGTATCTAGTGTTGATTAGTTTTGCATTTTCTGATTGAGGCGACTGGTAGTGACTATTTTGCATTAGTTGTTGCTTTAGTGGCTGAGCTTGAATAAATTTCTTCCGTAGGCATTGAGCTAGTACAATTATTTTTGTATTACGGTGATTAGATGTGATGGTATAATTATCTTTCCATGTGGTACGCGGGCGAATACTGTTTGTGTACTTTTTGATTGCTTCATTTTGAATTTTGATCTTCGTTTAAACTGAATGGAAATAGAGATTTCTAAGACCTTTTTTTTCGTGTGTGTGTTGCGGATGGGGGTGATGTCTCTGTTTCTGGAGTTTCTTGTTCAGCTTGAAGAGATGAAGTTAAACTTACATGCTCTTATGGCATCTAATTTGTTGTCCTATAGATTTACATTTTTCAATTCAACAGGTCTTTCTTCATCATTTTTCTTTACATAATTTGTTCGTCCATTTGAATCTTTGTTCTCTGTACTTTCTCTTTCTGCGATAGTTCAAGCCAGAAGAGTTAGCAGCCATTATGAATGATTTTGCTGAACCTGGATCACTTGCTCCAACTGGTTTGTTCCACGGAGGCACCAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATACGAGGAAAAAAGGTGAAGACTTAGCAAATTCTAGTTTTTTACTTGAAACAATTAGCATATCACTACTATATCTTACTACTAAAGTCGAACTTTTGGTTTCTGGTTTTCTGATAGATGGTAAAGAACTAAAAAATCGTTATATTCACGACATGAGAAAAGAAATTGTACCATGGAATTAGTTCCGGTATACGACCTCTGAGTACTTAACCCAAAGGCCAACGCCAAGTTATCTTCAGATGATTCTCTTTCCTGTCACAAATATTGTAGTAGTGTCCATCATGTATTTTGAGTCTGTAACTAAAAGTTCAAATGGAAAAGCATTCTGTGATGCCAACATAGGGAAGAAATACTGCTGTTTAATTCTAAGCACTTTAATTCATGTACATTTGTTTCCTCATTGACTTGAATGAATCAGGGTGCTGGCGGGATTACTATTAAGAAGACTAATCTGGCATTGGTCATCGGTATCTATGATGAGCCTTTGACTCCTGGTCAGTGCAACATGATTGTCGAAAGGCTAGGCGATTACCTGATCGAGCAGGGACTGTAG

mRNA sequence

ATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGATATTGAAGGCAGCCGTCTCTCTGCCGCTGCGATCATTGGCCAAGACGGCACTGTTGGGCTAAGAGCTCCATTCAAGCCAGAAGAGTTAGCAGCCATTATGAATGATTTTGCTGAACCTGGATCACTTGCTCCAACTGGTTTGTTCCACGGAGGCACCAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATACGAGGAAAAAAGGGTGCTGGCGGGATTACTATTAAGAAGACTAATCTGGCATTGGTCATCGGTATCTATGATGAGCCTTTGACTCCTGGTCAGTGCAACATGATTGTCGAAAGGCTAGGCGATTACCTGATCGAGCAGGGACTGTAG

Coding sequence (CDS)

ATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGATATTGAAGGCAGCCGTCTCTCTGCCGCTGCGATCATTGGCCAAGACGGCACTGTTGGGCTAAGAGCTCCATTCAAGCCAGAAGAGTTAGCAGCCATTATGAATGATTTTGCTGAACCTGGATCACTTGCTCCAACTGGTTTGTTCCACGGAGGCACCAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATACGAGGAAAAAAGGGTGCTGGCGGGATTACTATTAAGAAGACTAATCTGGCATTGGTCATCGGTATCTATGATGAGCCTTTGACTCCTGGTCAGTGCAACATGATTGTCGAAAGGCTAGGCGATTACCTGATCGAGCAGGGACTGTAG

Protein sequence

MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRAPFKPEELAAIMNDFAEPGSLAPTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVERLGDYLIEQGL

Homology

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BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot
Match: Q8GSL5 (Profilin OS=Prunus dulcis OX=3755 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.1e-56
Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQQYVD+HLMCDI+G+RL+AAAI+GQDG+V  ++     FKPEE+AAI+ DF +PG+L
Sbjct: 1   MSWQQYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDFDQPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GGTKYMVIQGE GAVIRGKKG+GGIT+KKTN AL+IGIYDEPLTPGQCNMIVE
Sbjct: 61  APTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot
Match: Q93YI9 (Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 103/131 (78.63%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMC+IEG+RL++AAIIGQDG+V  ++     FKPEE+ AIMNDFAEPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFAEPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGE GAVIRGKKG GGIT+KKTN AL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQSL 131

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BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-55
Identity = 101/131 (77.10%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMC+IEG+ L++AAIIGQDG+V  ++     FKPEE+ AIMNDF EPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+  GTKYMVIQGEPGAVIRGKKG GG+T+KKTN AL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

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BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot
Match: P49231 (Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-55
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HL+C+IEG+ L+ AAI+GQDG+V  ++     FKPEE+  IMNDF EPG+L
Sbjct: 1   MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPG+VIRGKKG GG+T+KKTNLALVIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

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BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot
Match: Q9XF42 (Profilin-3 OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-55
Identity = 101/131 (77.10%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDI+G+RL+AAAI+GQDG+V  ++     FKPEE+AAI+ DF +PG+L
Sbjct: 1   MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GGTKYMVIQGEPGAVIRGKKG+GGITIKKT+ AL+IGIYDEP+TPGQCN++VE
Sbjct: 61  APTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIVVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

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BLAST of Lcy12g014840 vs. ExPASy TrEMBL
Match: A0A2C9UAJ8 (Profilin OS=Manihot esculenta OX=3983 GN=MANES_16G073000 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 108/131 (82.44%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQQYVDEHLMCDIEGS L+AAAIIGQDG+V  ++     F PEE+  IMNDFAEPG+L
Sbjct: 1   MSWQQYVDEHLMCDIEGSHLTAAAIIGQDGSVWAQSSTFPQFTPEEITGIMNDFAEPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GGTKYMVIQGEPGAVIRGKKG+GG+TIKKTN AL+IGIYDEPLTPGQCNMIVE
Sbjct: 61  APTGLFLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTNQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. ExPASy TrEMBL
Match: A0A5D2KQV4 (Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 106/131 (80.92%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG+V  ++     FKPEE+  IMNDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNLAL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. ExPASy TrEMBL
Match: A0A1U8JNM2 (Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 106/131 (80.92%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG+V  ++     FKPEE+  IMNDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNLAL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. ExPASy TrEMBL
Match: A0A7J9C8I0 (Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 106/131 (80.92%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG+V  ++     FKPEE+  IMNDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNLAL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. ExPASy TrEMBL
Match: A0A0D2UFB2 (Profilin OS=Gossypium raimondii OX=29730 GN=B456_009G028400 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 106/131 (80.92%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG+V  ++     FKPEE+  IMNDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNLAL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. NCBI nr
Match: XP_021598008.1 (profilin-1-like [Manihot esculenta] >OAY26767.1 hypothetical protein MANES_16G073000v8 [Manihot esculenta])

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 108/131 (82.44%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQQYVDEHLMCDIEGS L+AAAIIGQDG+V  ++     F PEE+  IMNDFAEPG+L
Sbjct: 1   MSWQQYVDEHLMCDIEGSHLTAAAIIGQDGSVWAQSSTFPQFTPEEITGIMNDFAEPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GGTKYMVIQGEPGAVIRGKKG+GG+TIKKTN AL+IGIYDEPLTPGQCNMIVE
Sbjct: 61  APTGLFLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTNQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. NCBI nr
Match: XP_012442617.1 (PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypium hirsutum] >KAB2027366.1 hypothetical protein ES319_D05G028200v1 [Gossypium barbadense] >MBA0622251.1 hypothetical protein [Gossypium davidsonii] >MBA0657744.1 hypothetical protein [Gossypium klotzschianum] >MBA0744803.1 hypothetical protein [Gossypium gossypioides] >MBA0787314.1 hypothetical protein [Gossypium trilobum] >MBA0806766.1 hypothetical protein [Gossypium harknessii] >MBA0878572.1 hypothetical protein [Gossypium schwendimanii] >TYG66829.1 hypothetical protein ES288_D05G030200v1 [Gossypium darwinii] >TYH69072.1 hypothetical protein ES332_D05G031000v1 [Gossypium tomentosum] >TYI79564.1 hypothetical protein E1A91_D05G029900v1 [Gossypium mustelinum])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 106/131 (80.92%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG+V  ++     FKPEE+  IMNDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNLAL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. NCBI nr
Match: XP_031488192.1 (profilin [Nymphaea colorata])

HSP 1 Score: 224.6 bits (571), Expect = 5.0e-55
Identity = 108/131 (82.44%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVDEHLMCDI+G+ L+AAAIIG DG+V  ++     FKPEE+A IMNDFAEPGSL
Sbjct: 1   MSWQAYVDEHLMCDIDGNHLTAAAIIGHDGSVWAQSDTFPQFKPEEIAGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ G TKYMVIQGEPGAVIRGKKG+GG+TIKKTNLALVIGIYDEPLTPGQCNMIVE
Sbjct: 61  APTGLYLGSTKYMVIQGEPGAVIRGKKGSGGVTIKKTNLALVIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Lcy12g014840 vs. NCBI nr
Match: KAF3790045.1 (Profilin-3 [Nymphaea thermarum])

HSP 1 Score: 224.2 bits (570), Expect = 6.5e-55
Identity = 107/131 (81.68%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVDEHLMCDI+G+ L+AAAIIG DG+V  ++     FKPEE+A IMNDFAEPGSL
Sbjct: 1   MSWQAYVDEHLMCDIDGNHLTAAAIIGHDGSVWAQSDTFPQFKPEEIAGIMNDFAEPGSL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ G TKYMVIQGEPGAVIRGKKG+GG+T+KKTNLALVIGIYDEPLTPGQCNMIVE
Sbjct: 61  APTGLYLGSTKYMVIQGEPGAVIRGKKGSGGVTVKKTNLALVIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Lcy12g014840 vs. NCBI nr
Match: XP_015899513.1 (profilin-1 [Ziziphus jujuba])

HSP 1 Score: 224.2 bits (570), Expect = 6.5e-55
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRAP----FKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCDIEG+ LSAAAIIGQDG V  ++P    FKPEE+ AI+NDFAEPG+L
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSAAAIIGQDGNVWAQSPTFPQFKPEEITAIVNDFAEPGTL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTN AL+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lcy12g014840 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-52
Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCD+ G+RL+AAAI+GQDG+V  ++      KPEE+  I +DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GG KYMVIQGEP AVIRGKKGAGG+TIKKT LALV GIYDEP+TPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLIEQGL 128
            LG+YLIE GL
Sbjct: 158 NLGEYLIESGL 168

[Close]

BLAST of Lcy12g014840 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-49
Identity = 93/134 (69.40%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDI---EGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEP 60
           MSWQ YVDEHLMCD+   +G  L+AAAIIG DG+V  ++     FKP+E+  IM DF EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNM 120
           G LAPTG+F  G KYMVIQGEP AVIRGKKGAGGITIKKT  ++V G+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVERLGDYLIEQGL 128
           +VERLGDYLIEQGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Lcy12g014840 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 192.2 bits (487), Expect = 2.6e-49
Identity = 91/131 (69.47%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMCD+EG+ L+AAAI+GQDG+V  ++      KP+E+  I  DF EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GG KYMVIQGE GAVIRGKKG GG+TIKKTN ALV G YDEP+T GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Lcy12g014840 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 191.8 bits (486), Expect = 3.3e-49
Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDI---EGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEP 60
           MSWQ YVDEHLMCD+   +G  L+AAAI+G DG+V  ++     FK +E + IM DF EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNM 120
           G LAPTGLF  G KYMVIQGEPGAVIRGKKGAGGITIKKT  + V GIY+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVERLGDYLIEQGL 128
           +VERLGDYL+EQGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Lcy12g014840 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-48
Identity = 89/131 (67.94%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MSWQQYVDEHLMCDIEGSRLSAAAIIGQDGTVGLRA----PFKPEELAAIMNDFAEPGSL 60
           MSWQ YVD+HLMC++EG+ L+ AAI GQDG+V  ++      KP E+A I  DF E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLFHGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLALVIGIYDEPLTPGQCNMIVE 120
           APTGLF GG KYMV+QGE GAVIRGKKG GG+TIKKT  ALV GIYDEP+T GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 128
           RLGDYLIE GL
Sbjct: 121 RLGDYLIESGL 131

The following BLAST results are available for this feature:

BLAST of Lcy12g014840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GSL5	2.1e-56	79.39	Profilin OS=Prunus dulcis OX=3755 PE=1 SV=1	[more]
Q93YI9	1.0e-55	78.63	Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]
O82572	3.0e-55	77.10	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
P49231	4.0e-55	76.34	Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1	[more]
Q9XF42	5.2e-55	77.10	Profilin-3 OS=Malus domestica OX=3750 PE=1 SV=1	[more]

BLAST of Lcy12g014840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2C9UAJ8	1.1e-55	82.44	Profilin OS=Manihot esculenta OX=3983 GN=MANES_16G073000 PE=3 SV=1	[more]
A0A5D2KQV4	1.8e-55	80.92	Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1	[more]
A0A1U8JNM2	1.8e-55	80.92	Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1	[more]
A0A7J9C8I0	1.8e-55	80.92	Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1	[more]
A0A0D2UFB2	1.8e-55	80.92	Profilin OS=Gossypium raimondii OX=29730 GN=B456_009G028400 PE=3 SV=1	[more]

BLAST of Lcy12g014840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_021598008.1	2.2e-55	82.44	profilin-1-like [Manihot esculenta] >OAY26767.1 hypothetical protein MANES_16G07...	[more]
XP_012442617.1	3.8e-55	80.92	PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypiu...	[more]
XP_031488192.1	5.0e-55	82.44	profilin [Nymphaea colorata]	[more]
KAF3790045.1	6.5e-55	81.68	Profilin-3 [Nymphaea thermarum]	[more]
XP_015899513.1	6.5e-55	80.15	profilin-1 [Ziziphus jujuba]	[more]

BLAST of Lcy12g014840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56600.1	5.5e-52	71.76	profilin 3	[more]
AT2G19770.1	1.1e-49	69.40	profilin 5	[more]
AT2G19760.1	2.6e-49	69.47	profilin 1	[more]
AT4G29340.1	3.3e-49	69.40	profilin 4	[more]
AT4G29350.1	6.3e-48	67.94	profilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 3..12 score: 71.0 coord: 109..126 score: 72.5 coord: 60..74 score: 70.0 coord: 96..109 score: 66.25 coord: 36..56 score: 48.45
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 48..62 score: 79.03 coord: 1..13 score: 79.09 coord: 67..76 score: 96.73 coord: 113..126 score: 83.9 coord: 100..113 score: 88.83 coord: 80..95 score: 78.18
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..127 e-value: 8.1E-48 score: 174.9
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..126 e-value: 3.8E-35 score: 120.8
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..127
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..126 e-value: 3.96203E-47 score: 146.316
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..127 e-value: 2.2E-46 score: 159.2
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..127
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g014840.1	Lcy12g014840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding