Homology
BLAST of Lcy12g013290 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 764.6 bits (1973), Expect = 7.8e-220
Identity = 384/576 (66.67%), Postives = 473/576 (82.12%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--LHKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTL--PNWR------TGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKA 120
FT+ +W+ + D +S E L+D+F +LE LV G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 SKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTY 180
++L+KAI+V+E+M+ SGIIPDAS+YT+LV+ LCKRGNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA+KLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DR+PS+VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+MIYR C PNEGTYN+I +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 SSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYKPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGI 540
+ S+MEE+ N KP +N+N++ILG CK RRTDLA+EVFE+MV+K +PNETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
HE E++LA +VL EL+LR VI Q+ V+R+VMQ++L
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNL 575
BLAST of Lcy12g013290 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 393.7 bits (1010), Expect = 3.6e-108
Identity = 195/487 (40.04%), Postives = 307/487 (63.04%), Query Frame = 0
Query: 71 QKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIP 130
Q R L + F LE +V G PD+ T L+ C+ K RKA K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L Q++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A+KLLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTY 310
GR ++AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M SPS+VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIY 370
NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNSIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 430
R C P+ TYN++ T LC++G V++A I+ L +K S Y VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIL 490
A +LL EM PD+ TYSSL+ GL EG +DEAI+ F E +P+ +NS++L
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVIS 550
G CKSR+TD A++ M+++G PNET+YTIL+EG+ +E A ++L EL + ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of Lcy12g013290 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 343.2 bits (879), Expect = 5.6e-93
Identity = 178/479 (37.16%), Postives = 277/479 (57.83%), Query Frame = 0
Query: 85 LEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE +V KG PDV T+L+ + KA++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCK 171
Query: 145 RGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELP 264
Y+ L+EA E G DEA+KL+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P++VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ MI C P+ YN++
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG S Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLILGCCKSRRTDLALEV 504
PD TY+S+I LC EGM+DEA E+ M + P YN ++LG CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
E MV G PNETTYT+L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of Lcy12g013290 vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 259.2 bits (661), Expect = 1.1e-67
Identity = 134/454 (29.52%), Postives = 239/454 (52.64%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A++LL ++ + K + V Y++++ GLCK+G ++A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M +P +V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSIAT-LCEE 390
+EMI+ P +Y +I CK+ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
++ + + + + + + Y +I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ + D YN +I G C + + D A ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P+ TY I++ G+ + + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of Lcy12g013290 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 258.8 bits (660), Expect = 1.4e-67
Identity = 150/550 (27.27%), Postives = 272/550 (49.45%), Query Frame = 0
Query: 42 SKVLASTQITISPKDTIFTLPNWR---TGKGDQKSR---------ELRLNDAFLNLEFLV 101
S V+ T+SP + F WR +GK R EL+L+DA +V
Sbjct: 18 SLVVRGNAATVSPSFSFF----WRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 77
Query: 102 GKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVG 161
P + + ++LL + K +K I + E M GI + +Y+ L++ C+R +
Sbjct: 78 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 137
Query: 162 YAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLL 221
A+ ++ KM + GY N VT +SL+ G C +++++ L+D++ G PN T++ L+
Sbjct: 138 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 197
Query: 222 EAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT---------------- 281
+ A EA+ L+D ++AKG +P+LV+Y V++ GLCK G T
Sbjct: 198 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 257
Query: 282 -------------------EDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVL 341
+DA+ LF+E+ +KG PNVV+Y+ L+ LC GRW +A+ L
Sbjct: 258 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 317
Query: 342 LAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCK 401
L++M +P + T++ LI + G+ A ++ +EM++ P+ +Y+ +I C
Sbjct: 318 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 377
Query: 402 DRKVDLVVKCLDQMIYRHCNPNEGTYNS-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEF 461
++D + + M+ +HC P+ TYN+ I C+ V+E + + + +
Sbjct: 378 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 437
Query: 462 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVME 521
Y I+I L + G+ A ++ EM G P+ TY++L+ GLC G L++A+ +F ++
Sbjct: 438 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 522 ENNYKPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEID 544
+ +P YN +I G CK+ + + ++F + KG P+ Y ++ G + +
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 557
BLAST of Lcy12g013290 vs. ExPASy TrEMBL
Match:
A0A6J1CLJ3 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012056 PE=4 SV=1)
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPI NPSPET+RRGCGFFSHIPNLHKLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1 MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWRTGK DQKSR+LRLNDAFL+LEF+V KGQKPDVFQATQLLYDLCKASK+RKAIKVM
Sbjct: 61 LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVS LCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVS NILLRSLCYEGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYN+IATLCEEGMVQEAFSIIQSLGN+Q SSTQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEEN YKPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYN+LILGCCKS+RTDLALEVFE+MVDKGYLPNETTYTILVEGI+HEKEIDLA KVL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQLRDVISQSTV+RLVMQYDL++LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567
BLAST of Lcy12g013290 vs. ExPASy TrEMBL
Match:
A0A6J1FIQ6 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445837 PE=4 SV=1)
HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00
Identity = 533/567 (94.00%), Postives = 550/567 (97.00%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWR GKGDQK+RE RLNDAFLNLE+LVGKGQKPDVFQATQLLYDLCKASKLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYN+IATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRRTDLALEVFE MV+KGYLPNETTYT LVEGIVHEK+ DLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQL+DVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. ExPASy TrEMBL
Match:
A0A6J1IYH1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480348 PE=4 SV=1)
HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 531/567 (93.65%), Postives = 550/567 (97.00%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWR GKGDQK+RE RLNDAFLNLE+LVGKGQKPDVFQATQLLYDLCKASKLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVD+MEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDRMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYN+IATLCE GMVQEAFSIIQSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSIIQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTP+SF YSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPNSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRR+DLALEV+ MVDKGYLPNETTYT LVEGIVHEK+IDLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRSDLALEVYVTMVDKGYLPNETTYTTLVEGIVHEKQIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQL+DVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. ExPASy TrEMBL
Match:
A0A5A7U8T1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001460 PE=4 SV=1)
HSP 1 Score: 1067.4 bits (2759), Expect = 2.1e-308
Identity = 531/567 (93.65%), Postives = 552/567 (97.35%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNW+TGK +QKS+ELRL DAF +LEF+V KGQKPDVFQATQLLYDLCKA K+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYN+IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQLRDVISQST+ERLVMQYDL+ELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of Lcy12g013290 vs. ExPASy TrEMBL
Match:
E5GBB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 1067.4 bits (2759), Expect = 2.1e-308
Identity = 531/567 (93.65%), Postives = 552/567 (97.35%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPNL KLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNW+TGK +QKS+ELRL DAF +LEF+V KGQKPDVFQATQLLYDLCKA K+RKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAI+LFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYN+IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEENN KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLAL+VFEIMV KGYLPNETTYTILVEGI+HEKE+DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQLRDVISQST+ERLVMQYDL+ELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of Lcy12g013290 vs. NCBI nr
Match:
XP_038899825.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa hispida])
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 553/567 (97.53%), Postives = 561/567 (98.94%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNP PETTRRGCGFFSHIPNLHKLSL+KGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPLPETTRRGCGFFSHIPNLHKLSLSKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWRT KGDQKSRELRLNDAF +LEFLV KGQKPDVFQATQLLYDLCKA K+RKAIKVM
Sbjct: 61 LPNWRTAKGDQKSRELRLNDAFFHLEFLVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCK+GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPSIVTYNILIGSLTL GRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSIVTYNILIGSLTLSGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYN+IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQLRDVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLRDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. NCBI nr
Match:
XP_022141778.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica charantia])
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 536/567 (94.53%), Postives = 556/567 (98.06%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPI NPSPET+RRGCGFFSHIPNLHKLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1 MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWRTGK DQKSR+LRLNDAFL+LEF+V KGQKPDVFQATQLLYDLCKASK+RKAIKVM
Sbjct: 61 LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVS LCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVS NILLRSLCYEGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQM+YRHCNPNEGTYN+IATLCEEGMVQEAFSIIQSLGN+Q SSTQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEEN YKPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYN+LILGCCKS+RTDLALEVFE+MVDKGYLPNETTYTILVEGI+HEKEIDLA KVL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQLRDVISQSTV+RLVMQYDL++LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567
BLAST of Lcy12g013290 vs. NCBI nr
Match:
KAG6607968.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037481.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 534/567 (94.18%), Postives = 551/567 (97.18%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWR GKGDQK+RE RLNDAFLNLE+LVGKGQKPDVFQATQLLYDLCKASKLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYN+IATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRRTDLALEVFE MV+KGYLPNETTYT LVEGIVHEK+IDLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVFETMVNKGYLPNETTYTTLVEGIVHEKQIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQL+DVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. NCBI nr
Match:
XP_023525084.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 533/567 (94.00%), Postives = 551/567 (97.18%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWR GKGDQK+RE RLNDAFLNLE+LVGKGQKPDVFQATQLLYDLCKASKLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYN+IATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRRTDLALEV+E MV+KGYLPNETTYT LVEGIVHEK+IDLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVYETMVNKGYLPNETTYTTLVEGIVHEKQIDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQL+DVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. NCBI nr
Match:
XP_022940117.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00
Identity = 533/567 (94.00%), Postives = 550/567 (97.00%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNLHKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPNLHKLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
Query: 61 LPNWRTGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVM 120
LPNWR GKGDQK+RE RLNDAFLNLE+LVGKGQKPDVFQATQLLYDLCKASKLR+AIKVM
Sbjct: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAIQLFRELPSKGF+PNVVSYNILLRSLCYEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
Query: 301 DDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DDR+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNSIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
VVKCLDQMIYRHCNPNEGTYN+IATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540
TENYNSLI GCCKSRRTDLALEVFE MV+KGYLPNETTYT LVEGIVHEK+ DLATKVLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
Query: 541 ELQLRDVISQSTVERLVMQYDLSELPL 568
ELQL+DVISQSTVERLVMQYDL+ELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567
BLAST of Lcy12g013290 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 764.6 bits (1973), Expect = 5.6e-221
Identity = 384/576 (66.67%), Postives = 473/576 (82.12%), Query Frame = 0
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--LHKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTL--PNWR------TGKGDQKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKA 120
FT+ +W+ + D +S E L+D+F +LE LV G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 SKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTY 180
++L+KAI+V+E+M+ SGIIPDAS+YT+LV+ LCKRGNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA+KLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DR+PS+VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+MIYR C PNEGTYN+I +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 SSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYKPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGI 540
+ S+MEE+ N KP +N+N++ILG CK RRTDLA+EVFE+MV+K +PNETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
HE E++LA +VL EL+LR VI Q+ V+R+VMQ++L
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNL 575
BLAST of Lcy12g013290 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-109
Identity = 195/487 (40.04%), Postives = 307/487 (63.04%), Query Frame = 0
Query: 71 QKSRELRLNDAFLNLEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIP 130
Q R L + F LE +V G PD+ T L+ C+ K RKA K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L Q++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A+KLLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTY 310
GR ++AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M SPS+VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIY 370
NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNSIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 430
R C P+ TYN++ T LC++G V++A I+ L +K S Y VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIL 490
A +LL EM PD+ TYSSL+ GL EG +DEAI+ F E +P+ +NS++L
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVIS 550
G CKSR+TD A++ M+++G PNET+YTIL+EG+ +E A ++L EL + ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of Lcy12g013290 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 343.2 bits (879), Expect = 4.0e-94
Identity = 178/479 (37.16%), Postives = 277/479 (57.83%), Query Frame = 0
Query: 85 LEFLVGKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE +V KG PDV T+L+ + KA++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCK 171
Query: 145 RGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELP 264
Y+ L+EA E G DEA+KL+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P++VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ MI C P+ YN++
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG S Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLILGCCKSRRTDLALEV 504
PD TY+S+I LC EGM+DEA E+ M + P YN ++LG CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVISQSTVERLVMQYDL 563
E MV G PNETTYT+L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of Lcy12g013290 vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 259.2 bits (661), Expect = 7.6e-69
Identity = 134/454 (29.52%), Postives = 239/454 (52.64%), Query Frame = 0
Query: 91 KGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIQLFRELPSKGFSP 270
K A++LL ++ + K + V Y++++ GLCK+G ++A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M +P +V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMIYRHCNPNEGTYNSIAT-LCEE 390
+EMI+ P +Y +I CK+ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
++ + + + + + + Y +I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLILGCCKSRRTDLALEVFEIMVD 510
L+ GLC G ++A+EIF +E++ + D YN +I G C + + D A ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTILVEGIVHEKEIDLATKVLRELQ 544
KG P+ TY I++ G+ + + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of Lcy12g013290 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 258.8 bits (660), Expect = 9.9e-69
Identity = 150/550 (27.27%), Postives = 272/550 (49.45%), Query Frame = 0
Query: 42 SKVLASTQITISPKDTIFTLPNWR---TGKGDQKSR---------ELRLNDAFLNLEFLV 101
S V+ T+SP + F WR +GK R EL+L+DA +V
Sbjct: 18 SLVVRGNAATVSPSFSFF----WRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 77
Query: 102 GKGQKPDVFQATQLLYDLCKASKLRKAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVG 161
P + + ++LL + K +K I + E M GI + +Y+ L++ C+R +
Sbjct: 78 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 137
Query: 162 YAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLL 221
A+ ++ KM + GY N VT +SL+ G C +++++ L+D++ G PN T++ L+
Sbjct: 138 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 197
Query: 222 EAAYKERGADEAIKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT---------------- 281
+ A EA+ L+D ++AKG +P+LV+Y V++ GLCK G T
Sbjct: 198 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 257
Query: 282 -------------------EDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVL 341
+DA+ LF+E+ +KG PNVV+Y+ L+ LC GRW +A+ L
Sbjct: 258 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 317
Query: 342 LAEMDGDDRSPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCK 401
L++M +P + T++ LI + G+ A ++ +EM++ P+ +Y+ +I C
Sbjct: 318 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 377
Query: 402 DRKVDLVVKCLDQMIYRHCNPNEGTYNS-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEF 461
++D + + M+ +HC P+ TYN+ I C+ V+E + + + +
Sbjct: 378 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 437
Query: 462 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVME 521
Y I+I L + G+ A ++ EM G P+ TY++L+ GLC G L++A+ +F ++
Sbjct: 438 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 522 ENNYKPDTENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEID 544
+ +P YN +I G CK+ + + ++F + KG P+ Y ++ G + +
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 557
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| A3KPF8 | 7.8e-220 | 66.67 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
| Q3EDF8 | 3.6e-108 | 40.04 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
| Q9SR00 | 5.6e-93 | 37.16 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
| Q9ASZ8 | 1.1e-67 | 29.52 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
| Q9SXD1 | 1.4e-67 | 27.27 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CLJ3 | 0.0e+00 | 94.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordic... | [more] |
| A0A6J1FIQ6 | 0.0e+00 | 94.00 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucurbit... | [more] |
| A0A6J1IYH1 | 0.0e+00 | 93.65 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucurbit... | [more] |
| A0A5A7U8T1 | 2.1e-308 | 93.65 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| E5GBB3 | 2.1e-308 | 93.65 | Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038899825.1 | 0.0e+00 | 97.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa ... | [more] |
| XP_022141778.1 | 0.0e+00 | 94.53 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica ... | [more] |
| KAG6607968.1 | 0.0e+00 | 94.18 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| XP_023525084.1 | 0.0e+00 | 94.00 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic-like [Cucur... | [more] |
| XP_022940117.1 | 0.0e+00 | 94.00 | pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G79080.1 | 5.6e-221 | 66.67 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G09900.1 | 2.6e-109 | 40.04 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT3G04760.1 | 4.0e-94 | 37.16 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G12620.1 | 7.6e-69 | 29.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G62670.1 | 9.9e-69 | 27.27 | rna processing factor 2 | [more] |
