Lcy12g012350 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTCAGCCTCCTCGAGGTTTGTTTTCGCTCGTTCATTTTTTATACTGTGTTCATGATAGAAAGATTGATTTCTATCAGTGAAATTTTTTTCCTAAACACTTAACAACAATGGTAGAAAATGGTTGACCTAACAAAATTCCACCTTAAAACATGAAGAACACTTTTTGTTATTTTTTTGGGCACTCTTCCAATGTTTTTTTTAGGGAAGTTCAGGGTGCCAAGGATGAGAGTATCCCTATATGGTTTAAAGACTGTTTAGTTGGTGTACCTGCTTTTATTAATGAAGTTTATCTTTTTATCAAAAAAAAAAAAAAAAAAAAAACAACAACAAGTTGAAGCTTAAGCACCCTAATCCTCACCTAAAAGGATAACCATATATAAACCATCCTTACAAACTTTTATACAAACAAAACACCAAGAAGAGAAGAATAAAGAGAGGAAGAAACTAAGAAAGAAGCTTCTAGGAGAGATTCCAGCTTTCCCAAGCTGGAAAGTCTTCAACCAACTGCTCTCTTGTCTTTTTCTCTCACGGTTTTCCTCCAACAGCAGCACTTTTCCCAATATTCCTTATCCCACCAATTACCTTATTCTTTTGGAAAGTCACCAGGTTCATGTTCAAGTTTCATTCAGTTTGACATGTTTGCTTCAAACACAAAAAAAATGTTGTATGAAGTTTTGGAATTTAATACATTGTTATGATGCTACAAATGCAAGATGGAAAGCATTTATACCTAACATCATACTTTTGCAGTGGATATATGGCACCAGAATATACAACACGAGGCTACTTAACAGATAAAACATATGTTTATAGCTTTGGAATGTGGGATTGGAAATAGTCAGTAGAAGGAGCAATACTATATACATCGGTCAAAGGATAAGTGCCTTTATCTTCTTGATTGGGTAACTTGATTTCATTTTTGGCAGGCACTTGTATGGAAAGAAAATGGAAGTTTAATGGAGCTAGTTGATCCAAAGTTAGGCTCCAGCTTCAACCAGGAAGAGGCAATGAAAACGATCAATATTGCTTTCCTTTGCACCAATGTCTCTGCCTCCGCGAGACGTACTATGTCCATTGTCCACTGTGGTGAGCATGTTGGAAGGTAAGGTTGCGGTCAAGGAGTTGGTTATATCAGATCCAGATGACATGAGAAAAGAGATGAGGGCAATGTGGACCCTTATTCAACAGAATGAGAAAATAACCGAGCGAGAGTTCATCATCTATAAACAGGGGATCTTCCAGTTCTTCGACATCAAAGAAGAGTAAAAACTAGATTACACTGCATCAACATGCAATCTAGTTGGACAGAGAATGAACTCCAACAATGAAGAAGAAGAAGCCAATGAAAGAAACAAAAAGAGTTTGTAGAGAGGAACGTATTCACTTATTAGCTGTCACAAATATTTGTATGCAAGTAAAAAAAACCTGAGTCTGTTGGTTGTAATCGCTCTGTGTATATGGCTTCAGTTGCTTTGGAGGGTGCTATGGGCAGAGGATTTCAATGCTCATTGTTTGGAAAACTCAACGACAGTGTTCTTGTTATGTTTCAAAGAAACATTAGCCCCTTGGAAGAAGCTCTAGCATGAGGCCATTTTTCCTAAATAGTTTCGAAAAATCTCGTGTTTTTCAATTTCTGTTTTTACCACTCTTATTCATCTAATTAACCCTAGTTTATGGCTTTCTAATTTCTCTCGACTCCTGGATTATCGATGAATTACTTTCTATGTTTTTTTTTTTTAAAAAATTTAATTCAAAAAGATGTTTAGGGTTAAAAAAAAAATTCATAAAGATATAATTGTCTAAAGTTAAAGTAAATAGACAAACCGTTGAAACTTTTTGACTAAATTTGGATAGTGATATTAGATGCACCCATTACCTATAAAGAATGAAAAACGTAGATAGTATTTTAGGGGAAGTTTTTACTCACTAAATCTGTCAAAGAAATTAGCACAAAAGGGAGAAACAAACATTTTGGAAGAAAGAAATTTTCATTGAGAAAGTAACTTTTGAAAGGACTCTCTCACTTTCTCACTAACTCACTCTTTCTTACTTTTGATACTTTTCCCAACTTGGCTTGCTTGTTAGGGGTGAAAAAACCCGAACCGAACCGGAAAATCGAATAGAACCAAATCGGTTTGGTTTTCATATAAATCCAGGCCGAACCGAACCGAACCGCGGTTCGTTCACGTTTTTAAGTTAAATAGAAACTTTAGGGTTTGTGCAGCCGCATTTCGTGATTTCGGCCCGCCTCCTCCCCCTCTCTCTCTCTCATTCTCTCTTGTCTCTTTCCCACAAATCTTCTTCAACAAACCCCTTCTCTTTCTCTCCGTCTCTGCAAACAAAGCTTCTCGCCCACCGTGGAGCCATAGTCACCATCGTCGCCACGCCCTTGAATGCCGCTCGCCATCGATTCCAGTTTACAGATCCGCCTTTGAATGCTGCATGTCGTCTTCGTCTTCGTGCTCGGGTTTCTCAGGTGGGCTCATGATCTCCAAGGCTCTTATCTGAACCAAATCGGCCATTCCGCTGCCACCATCGCCGCCGTGGGGTTCTCAATGCTTCCAGTGGGCGAATTGACGGAATGCTTCCACCATCGCTGA ATGAAATTCAGCCTCCTCGAGGCACTTGTATGGAAAGAAAATGGAAGTTTAATGGAGCTAGTTGATCCAAAGTTAGGCTCCAGCTTCAACCAGGAAGAGGCAATGAAAACGATCAATATTGCTTTCCTTTGCACCAATGTCTCTGCCTCCGCGAGACGTACTATGTCCATTGTCCACTGTGGTGAGCATGTTGGAAGGTGGGCTCATGATCTCCAAGGCTCTTATCTGAACCAAATCGGCCATTCCGCTGCCACCATCGCCGCCGTGGGGTTCTCAATGCTTCCAGTGGGCGAATTGACGGAATGCTTCCACCATCGCTGA ATGAAATTCAGCCTCCTCGAGGCACTTGTATGGAAAGAAAATGGAAGTTTAATGGAGCTAGTTGATCCAAAGTTAGGCTCCAGCTTCAACCAGGAAGAGGCAATGAAAACGATCAATATTGCTTTCCTTTGCACCAATGTCTCTGCCTCCGCGAGACGTACTATGTCCATTGTCCACTGTGGTGAGCATGTTGGAAGGTGGGCTCATGATCTCCAAGGCTCTTATCTGAACCAAATCGGCCATTCCGCTGCCACCATCGCCGCCGTGGGGTTCTCAATGCTTCCAGTGGGCGAATTGACGGAATGCTTCCACCATCGCTGA MKFSLLEALVWKENGSLMELVDPKLGSSFNQEEAMKTINIAFLCTNVSASARRTMSIVHCGEHVGRWAHDLQGSYLNQIGHSAATIAAVGFSMLPVGELTECFHHR Homology
BLAST of Lcy12g012350 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.8e-08 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy Swiss-Prot
Match: C0LGG7 (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 6.3e-06 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy Swiss-Prot
Match: Q9ASQ6 (Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana OX=3702 GN=RFK1 PE=2 SV=3) HSP 1 Score: 49.3 bits (116), Expect = 3.1e-05 Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy TrEMBL
Match: A0A5A7VHP2 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00560 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.0e-11 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy TrEMBL
Match: A0A5D3DWQ6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00480 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.0e-11 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy TrEMBL
Match: A0A6J1BXW4 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.7e-10 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy TrEMBL
Match: A0A6J1BXX1 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.7e-10 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. ExPASy TrEMBL
Match: A0A6J1BYS5 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.7e-10 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. NCBI nr
Match: TYK27868.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 6.3e-11 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Lcy12g012350 vs. NCBI nr
Match: KAA0066720.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 6.3e-11 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Lcy12g012350 vs. NCBI nr
Match: XP_022134114.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X1 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. NCBI nr
Match: XP_022134132.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X3 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. NCBI nr
Match: XP_022134124.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X2 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Lcy12g012350 vs. TAIR 10
Match: AT1G53430.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Lcy12g012350 vs. TAIR 10
Match: AT1G53440.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Lcy12g012350 vs. TAIR 10
Match: AT1G53430.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Lcy12g012350 vs. TAIR 10
Match: AT1G07650.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-09 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Lcy12g012350 vs. TAIR 10
Match: AT1G07650.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 58.2 bits (139), Expect = 4.8e-09 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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