Lcy12g011730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g011730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Boron transporter
Location	Chr12: 39242676 .. 39246268 (+)
RNA-Seq Expression	Lcy12g011730
Synteny	Lcy12g011730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGCTTATCTAGGACTTAACAAATTTCATCTTACCTGGCCACCAATATCAGAATCTCTTCCCAGTTCCAATATTTTCTCCTTACACCAACCCATGGATACCGCAACAATGACAAACTTCACATGGGAAGGTAACATATTTATATTAATTGTTGCACGCATTATCCTTCTATCTATTTGAAGAATTTACCCATATCTAGTCCACTGCGTAATTCCTTGATAAACGTGATATGCCCATAAACCATTATCATTCATTGAAATTAGAGTACTTGAATGGATACCTCATCAGGACAATTTAAAGGCTTTTAGACTTTTTAATCATCTGCCCAAATTTAACTTGTAGACTACTCTATCTCTTGTTTAACTTGCAGATGACAGTCAATCATATGAATGGGCACAATAATGACATGCTTCTGCAAAGATATGGCTTTTCATCTCCCGTGGTAATTTTCTTTGAAGCACTGAACTTTCCCAGATATATTTGAGTTAATAATGCAATTTATTTGAAGTCTAGTGTAGAAGAGATTGTGTTCCCTTCAAAAGGAAAAAGAAAAGTATTTACTGCTTCAATAGCTCTGATTTGAGTCACCAGTGTGCTAAATCTCATTTATATGCAACTTCTGCAAGAAAGTGAGGTGGAGAAATAAAGGCTAATAATTGGTATTTTCAAATGGAGGCTTAAAGAAATAGAATAACGTGGGAGCACTTGAACACCTTAACTATGTTTAGGTTATAATGAAAGTTTGTAGCTGTAATAATCTCAATTTTATTTGTTTTTCACTGATTGAATGACTCTGTTGTCTTGTTATGGTTTAAACATGCTGACAAGATGCTCAAGTTAGCATTAGGTATATGCTTAAGTTAGCAGTTGGTGAGTTATTTGCTCATATTTTTGGAAATCCTTTGTTTTGTGTCTACTAAGTACCGCAGTTTGCTTGTTGCCTATCGCTTTAGGGAGAAAGTGGAAGCAGTTGAATTTGCATAATGTTGAAGTTGTAGTAGTATTTAACTTTGAAATCTTTTTACTTGATTGGGAAGGGGGACTACAGTATATACCTTTCTGTTTAGTGGAGAGGTACTGGTGATTGAGTTTGAGTTTCTAAAACCCCTCTTTGTTATATAGCAATGCCATTGAAGAAGATCCCTAGAAGTTGAAAGCTGAAGAACTTTTCATGTCCATCATTGTGAAATACTTGTCTTCTTCTTTTTTTTTGCTTTGAGAGAGATTTTGAAGTGAAGAAAGAAGACCCATATTGAAGCTATGGAGGAAACTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAGGAGAGGTTGGTTTGTTACAAACAAGACTGGACTGGTGGGTTGAGAGCTGGATATAGGTATGAAAATGAAAAAAAATCTGTCCATTGTTCTTTGGTTTTTGCAATCTTGGTTCATTTTGACTTTTGGGGTTTGTTTTTTTTGCCTTTCTGTTTGAGTGTTGAAGGTGGATTCTTGATGTTTTCATTGGTTTATAGGATTTTGGCTCCCACCATTTACATATTCTTTGCCTCTGCAATTCATGTCATTTCATTTGGTGAACAGTTGGAGAGAAATACTGGTGAGAGCTACTTGGAACTCTTGTGAAGTTCATGTTAGATCTGATATTGAATTTATAACATGCTCTTAACTTAAAGGAAAAACAAAGAGATTCTAAAGATATGGATTGATTTTGAATTCTAAGTGTATGTCATTGATTGTTGTTTTTTTTCAATGGTTTATGCAGATGGAGTGCTGACTACAGTTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCTATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTAGCAGAGCCTAAATGATATGTTCATGAAAGTTCTTCATAGTTGGCAATTTTGTCACATGAGGCAGATAAAAAGGTCAACTCGTTTATAATTTCCACAATTATTTTGGTAGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATATCCTATTCCTATATACCTTCAAGAAGTGTCCCACAAGGTATCCCGAGGCCGAAACCATGGTCTCCCGGTGCATACAACAATTGGACTGTTATTAATGACTTGTTTCTTTGTTTTAATCTCTTTACATTTTCTCATTTTCTTTAGGCCTTATGCGATGCGGAAAGAGTTGCAGACTTCGATGGATAAACTATCTGAGGCCTGGTATTAAAGAGAGGAAATTTCTCCCTAGAGGAACAGAACACTGTTCTTTAGCTCCATGAAAAGCTTGGCAATAGGTATATCAACTGAAAATGCCATTAACATGGTTTTGATTAGTATATCGTAACTTATTGACTTAAGCTTATGAATTGATTAATATATCGTAACTTATCGACTTAACCTTATGAATAGTTATATCAACACGATGTTGCCAAATGAATTTAGAATTTTAAATTAATAGTTTGAAATTTGTGTACTAATTTGCTTTGTTTGATGCATAATGAGAAGTGTTGATTAGTTATGTGTTGGACCATCCAAATCAGGTCTTTGTTTCTCCATAGATTTTTTTTTTTTTTTTGAAACTATGTGTTTCTCCATACGGCGAAAGTTGCTTTACAGAAGCATTCAATGTTGTCAAGCATAGCTGCTGATGTTTTGCTAGGAAATGTAACCCAGTGTAGTTTTTGAAGCTAAGCTTGATGGTAGTGGCTTTTGAGGAAATGGGGATGTTATTATACATTAGACATGCTCATTTGGGATGGCATATGTGGTTTTGATAAAGTAATTTGGTTATCCCCAGTTGTCAAAATATGCTTAAAAACAGGACAGAGCATAGGTAGGATGAATGTTGGATTAATGAAATGCCATATCCCATAAATGGATGACAGGTAAGGCAATCAGGTTTATATAGCTTCTTTGCTTCCCAAGCTAGAGGGTGTGTGTGTTTTAGGCTATGATACGATTAAGGTCTAATAAAGTTGTGGCTAATAAAGTTTGTTTGATTGCAATGTCCTTTAATGATTGTTTAGATTTAGATTGTGCTTGATGCAAGACCTAACTTGGTTAGTCTTAGGATATTTGGGGTCTTGTTGTGAACTTGAAGTGTTGTAAGGTTGTAGTTGGGTGATTTTTTTCATATAGAAGTGTGTTTCTCTTGTTTAACAGGTTTAAAAATTTTTGGGTTAGTCATATGTATGTCGTTATGCTATCGAAATTTCTGGAGCAATCGATTAGAATTAGGATAGAGACTTTAGTAATGTCTCTAGGTTAAGTATAGAAACCTAGAGCGTTACAGGTTTTCTGAAGGGGTTAAACTTGATGTCTTGAAGTTTGTAAGCTTTTGGAGTTTATTGGGTTTTCTAACAATTTTTTCCGATACTCATCGAGATGGTTTTTTTTTTTTCCTCTCTCTCTCCTTAGGTTCTACGAGTTGTTGGACATATCTTTGTTATGTGAATTCTTGTTTTGGTTGTATCGAACCTAATTACAATTTGTTTTCCTTAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAAGAATGGAAGCGGCATGTACGAGAAATTTTGTTTTTAAGTGTAGGTG

mRNA sequence

TTGTTGCTTATCTAGGACTTAACAAATTTCATCTTACCTGGCCACCAATATCAGAATCTCTTCCCAGTTCCAATATTTTCTCCTTACACCAACCCATGGATACCGCAACAATGACAAACTTCACATGGGAAGATGACAGTCAATCATATGAATGGGCACAATAATGACATGCTTCTGCAAAGATATGGCTTTTCATCTCCCGTGGTAATTTTCTTTGAAGCACTGAACTTTCCCAGATATATTTGAGTTAATAATGCAATTTATTTGAAGTCTAGTGTAGAAGAGATTGTGTTCCCTTCAAAAGGAAAAAGAAAAGTATTTACTGCTTCAATAGCTCTGATTTGAGTCACCAGTGTGCTAAATCTCATTTATATGCAACTTCTGCAAGAAAGTGAGGTGGAGAAATAAAGGCTAATAATTGGTATTTTCAAATGGAGGCTTAAAGAAATAGAATAACGTGGGAGCACTTGAACACCTTAACTATGTTTAGGTTATAATGAAAGTTTGTAGCTGTAATAATCTCAATTTTATTTGTTTTTCACTGATTGAATGACTCTGTTGTCTTGTTATGGTTTAAACATGCTGACAAGATGCTCAAGTTAGCATTAGGTATATGCTTAAGTTAGCAGTTGGTGAGTTATTTGCTCATATTTTTGGAAATCCTTTGTTTTGTGTCTACTAAGTACCGCAGTTTGCTTGTTGCCTATCGCTTTAGGGAGAAAGTGGAAGCAGTTGAATTTGCATAATGTTGAAGTTGTAGTAGTATTTAACTTTGAAATCTTTTTACTTGATTGGGAAGGGGGACTACAGTATATACCTTTCTGTTTAGTGGAGAGGTACTGGTGATTGAGTTTGAGTTTCTAAAACCCCTCTTTGTTATATAGCAATGCCATTGAAGAAGATCCCTAGAAGTTGAAAGCTGAAGAACTTTTCATGTCCATCATTGTGAAATACTTGTCTTCTTCTTTTTTTTTGCTTTGAGAGAGATTTTGAAGTGAAGAAAGAAGACCCATATTGAAGCTATGGAGGAAACTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAGGAGAGGTTGGTTTGTTACAAACAAGACTGGACTGGTGGGTTGAGAGCTGGATATAGGTATGAAAATGAAAAAAAATCTGTCCATTGTTCTTTGGTTTTTGCAATCTTGGTTCATTTTGACTTTTGGGGTTTGTTTTTTTTGCCTTTCTGTTTGAGTGTTGAAGGTGGATTCTTGATGTTTTCATTGGTTTATAGGATTTTGGCTCCCACCATTTACATATTCTTTGCCTCTGCAATTCATGTCATTTCATTTGGTGAACAGTTGGAGAGAAATACTGATGGAGTGCTGACTACAGTTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCTATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTAGCAGAGCCTAAATGATATGTTCATGAAAGTTCTTCATAGTTGGCAATTTTGTCACATGAGGCAGATAAAAAGGTCAACTCGTTTATAATTTCCACAATTATTTTGGTAGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGCCTTATGCGATGCGGAAAGAGTTGCAGACTTCGATGGATAAACTATCTGAGGCCTGGTATTAAAGAGAGGAAATTTCTCCCTAGAGGAACAGAACACTGTTCTTTAGCTCCATGAAAAGCTTGGCAATAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAAGAATGGAAGCGGCATGTACGAGAAATTTTGTTTTTAAGTGTAGGTG

Coding sequence (CDS)

ATGGAGGAAACTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAGGAGAGGTTGGTTTGTTACAAACAAGACTGGACTGGTGGGTTGAGAGCTGGATATAGGTATGAAAATGAAAAAAAATCTGTCCATTGTTCTTTGGTTTTTGCAATCTTGGTTCATTTTGACTTTTGGGGTTTGTTTTTTTTGCCTTTCTGTTTGAGTGTTGAAGGTGGATTCTTGATGTTTTCATTGGTTTATAGGATTTTGGCTCCCACCATTTACATATTCTTTGCCTCTGCAATTCATGTCATTTCATTTGGTGAACAGTTGGAGAGAAATACTGATGGAGTGCTGACTACAGTTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCTATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTAGCAGAGCCTAA

Protein sequence

MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLSLHSSLWDHSLYCWRSTFANLGSSRA

Homology

[Close]

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot
Match: Q9M1P7 (Probable boron transporter 2 OS=Arabidopsis thaliana OX=3702 GN=BOR2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-22
Identity = 60/119 (50.42%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPF GIKNDLK RL+CYKQDWTGG++AG                           
Sbjct: 1   MEETFVPFEGIKNDLKGRLMCYKQDWTGGIKAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              +RILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot
Match: Q8VYR7 (Boron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=BOR1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-22
Identity = 60/119 (50.42%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPF GIKNDLK RL+CYKQDWTGG +AG                           
Sbjct: 1   MEETFVPFEGIKNDLKGRLMCYKQDWTGGFKAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              +RILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot
Match: Q93Z13 (Probable boron transporter 3 OS=Arabidopsis thaliana OX=3702 GN=BOR3 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-17
Identity = 52/116 (44.83%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 3   ETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFF 62
           E+FVPF+GIK D+K RL CYKQDW  GLRAG                             
Sbjct: 5   ESFVPFQGIKKDVKGRLNCYKQDWISGLRAG----------------------------- 64

Query: 63  LPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNL 119
                            +RILAPT YIFFASAI VI+FGEQLER+TDG +T V  L
Sbjct: 65  -----------------FRILAPTTYIFFASAIPVITFGEQLERDTDGKITAVQTL 74

[Close]

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot
Match: Q9XI23 (Boron transporter 4 OS=Arabidopsis thaliana OX=3702 GN=BOR4 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 42/112 (37.50%), Postives = 53/112 (47.32%), Query Frame = 0


Query: 8   FRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFFLPFCL 67
           FRGI  DL+ R +CYK+DW  GLR+G                                  
Sbjct: 13  FRGIVADLRGRALCYKEDWVAGLRSG---------------------------------- 72

Query: 68  SVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                       + ILAPT YIFFASA+ VI+FGEQL R+T+G L+TV  L+
Sbjct: 73  ------------FGILAPTTYIFFASALPVIAFGEQLSRDTEGALSTVETLA 78

[Close]

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot
Match: Q9SSG5 (Putative boron transporter 5 OS=Arabidopsis thaliana OX=3702 GN=BOR5 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 40/113 (35.40%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 7   PFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFFLPFC 66
           PF+GI  D+K R +CYKQDW  GLR+G                                 
Sbjct: 12  PFQGIIRDVKGRALCYKQDWIAGLRSG--------------------------------- 71

Query: 67  LSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                        + ILAPT Y+FFASA+ VI+FGEQL  +T+  L+TV  L+
Sbjct: 72  -------------FGILAPTTYVFFASALPVIAFGEQLSHDTERSLSTVETLA 78

[Close]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL
Match: A0A438F6U6 (Putative boron transporter 2 OS=Vitis vinifera OX=29760 GN=BOR2_1 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 69/119 (57.98%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDL+ RL+CYKQDWTGGLRAG+RY     S  C LV  +         
Sbjct: 1   MEETFVPFRGIKNDLQGRLLCYKQDWTGGLRAGFRYAFLLPSHICMLVTNL--------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                            +V RILAPT YIFFASAI VISFGEQLE+NTDGVLT V  L+
Sbjct: 61  -----------------IVCRILAPTTYIFFASAIPVISFGEQLEKNTDGVLTAVQTLA 93

[Close]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL
Match: A0A2N9EIC4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2415 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22
Identity = 69/136 (50.74%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRY---------------ENEKKSVHC 60
           MEETFVPFRGIKNDL  RL+CYK+DWTGGLRAG+RY               ++++ ++  
Sbjct: 1   MEETFVPFRGIKNDLNGRLMCYKEDWTGGLRAGFRYICLLPWEDCFIAVPVKHQESALIP 60

Query: 61  SLVFA--ILVHFDFWGLFFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQ 120
           S V A   L             C++ + G +  +   RILAPT YIFFASAI VISFGEQ
Sbjct: 61  SKVGAWKRLCAISDQECLNGRLCVTRKTGLVFKTSNIRILAPTTYIFFASAIPVISFGEQ 120

[Close]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL
Match: A0A438EZL4 (Putative boron transporter 2 OS=Vitis vinifera OX=29760 GN=BOR2_3 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-21
Identity = 64/119 (53.78%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDLK R++CYKQDWTGGLRAG                         G 
Sbjct: 1   MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGI------------------------GW 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
             LPF  S++          +ILAPT YIFFASAI VISFGEQLER T+G LT V  L+
Sbjct: 61  VILPFLFSIK----------KILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLA 85

[Close]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL
Match: A0A438KAW6 (Boron transporter 1 OS=Vitis vinifera OX=29760 GN=BOR1_0 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-21
Identity = 64/119 (53.78%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDLK R++CYKQDWTGGLRAG                         G 
Sbjct: 1   MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGI------------------------GW 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
             LPF  S++          +ILAPT YIFFASAI VISFGEQLER T+G LT V  L+
Sbjct: 61  VILPFLFSIK----------KILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLA 85

[Close]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL
Match: A0A059B5N8 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04094 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-21
Identity = 63/119 (52.94%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDL+ RL+CYKQDWTGGLRAG                           
Sbjct: 1   MEETFVPFRGIKNDLQGRLLCYKQDWTGGLRAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              +RILAPT YIFFASAI VISFGEQLERNTDGVLT V  L+
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. NCBI nr
Match: RVW55671.1 (putative boron transporter 2 [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 6.1e-25
Identity = 69/119 (57.98%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDL+ RL+CYKQDWTGGLRAG+RY     S  C LV  +         
Sbjct: 1   MEETFVPFRGIKNDLQGRLLCYKQDWTGGLRAGFRYAFLLPSHICMLVTNL--------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                            +V RILAPT YIFFASAI VISFGEQLE+NTDGVLT V  L+
Sbjct: 61  -----------------IVCRILAPTTYIFFASAIPVISFGEQLEKNTDGVLTAVQTLA 93

[Close]

BLAST of Lcy12g011730 vs. NCBI nr
Match: RVX18344.1 (Boron transporter 1 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 5.3e-21
Identity = 64/119 (53.78%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDLK R++CYKQDWTGGLRAG                         G 
Sbjct: 1   MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGI------------------------GW 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
             LPF  S++          +ILAPT YIFFASAI VISFGEQLER T+G LT V  L+
Sbjct: 61  VILPFLFSIK----------KILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLA 85

[Close]

BLAST of Lcy12g011730 vs. NCBI nr
Match: RVW53126.1 (putative boron transporter 2 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 5.3e-21
Identity = 64/119 (53.78%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDLK R++CYKQDWTGGLRAG                         G 
Sbjct: 1   MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGI------------------------GW 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
             LPF  S++          +ILAPT YIFFASAI VISFGEQLER T+G LT V  L+
Sbjct: 61  VILPFLFSIK----------KILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLA 85

[Close]

BLAST of Lcy12g011730 vs. NCBI nr
Match: KAG6472921.1 (hypothetical protein ZIOFF_070399 [Zingiber officinale])

HSP 1 Score: 110.9 bits (276), Expect = 9.1e-21
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPFRGIKNDL+ RL CYKQDWTGG RAG         + C+    + +  D    
Sbjct: 74  MEETFVPFRGIKNDLEGRLNCYKQDWTGGFRAG---------ISCANAMCLYMLMDL--- 133

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                               RILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 134 --------------------RILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLA 160

[Close]

BLAST of Lcy12g011730 vs. NCBI nr
Match: XP_008447454.1 (PREDICTED: boron transporter 1 [Cucumis melo] >KAA0038108.1 boron transporter 1 [Cucumis melo var. makuwa] >TYK20500.1 boron transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 9.1e-21
Identity = 64/119 (53.78%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVP RGIKNDLK RLVCYKQDWTGGLRAG                           
Sbjct: 1   MEETFVPLRGIKNDLKGRLVCYKQDWTGGLRAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              YRILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 61  -------------------YRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. TAIR 10
Match: AT3G62270.1 (HCO3- transporter family )

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 60/119 (50.42%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPF GIKNDLK RL+CYKQDWTGG++AG                           
Sbjct: 1   MEETFVPFEGIKNDLKGRLMCYKQDWTGGIKAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              +RILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. TAIR 10
Match: AT2G47160.1 (HCO3- transporter family )

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-23
Identity = 60/119 (50.42%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPF GIKNDLK RL+CYKQDWTGG +AG                           
Sbjct: 1   MEETFVPFEGIKNDLKGRLMCYKQDWTGGFKAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNLS 120
                              +RILAPT YIFFASAI VISFGEQLER+TDGVLT V  L+
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLA 73

[Close]

BLAST of Lcy12g011730 vs. TAIR 10
Match: AT2G47160.2 (HCO3- transporter family )

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 58/132 (43.94%), Postives = 65/132 (49.24%), Query Frame = 0


Query: 1   MEETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGL 60
           MEETFVPF GIKNDLK RL+CYKQDWTGG +AG                           
Sbjct: 1   MEETFVPFEGIKNDLKGRLMCYKQDWTGGFKAG--------------------------- 60

Query: 61  FFLPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDG-------VLT 120
                              +RILAPT YIFFASAI VISFGEQLER+T          L 
Sbjct: 61  -------------------FRILAPTTYIFFASAIPVISFGEQLERSTGNSAKSFYLALF 86

Query: 121 TVSNLSLHSSLW 126
            + NL L S ++
Sbjct: 121 QLRNLKLDSEIF 86

[Close]

BLAST of Lcy12g011730 vs. TAIR 10
Match: AT3G06450.1 (HCO3- transporter family )

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-18
Identity = 52/116 (44.83%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 3   ETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFF 62
           E+FVPF+GIK D+K RL CYKQDW  GLRAG                             
Sbjct: 5   ESFVPFQGIKKDVKGRLNCYKQDWISGLRAG----------------------------- 64

Query: 63  LPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNL 119
                            +RILAPT YIFFASAI VI+FGEQLER+TDG +T V  L
Sbjct: 65  -----------------FRILAPTTYIFFASAIPVITFGEQLERDTDGKITAVQTL 74

[Close]

BLAST of Lcy12g011730 vs. TAIR 10
Match: AT3G06450.2 (HCO3- transporter family )

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-18
Identity = 52/116 (44.83%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 3   ETFVPFRGIKNDLKERLVCYKQDWTGGLRAGYRYENEKKSVHCSLVFAILVHFDFWGLFF 62
           E+FVPF+GIK D+K RL CYKQDW  GLRAG                             
Sbjct: 5   ESFVPFQGIKKDVKGRLNCYKQDWISGLRAG----------------------------- 64

Query: 63  LPFCLSVEGGFLMFSLVYRILAPTIYIFFASAIHVISFGEQLERNTDGVLTTVSNL 119
                            +RILAPT YIFFASAI VI+FGEQLER+TDG +T V  L
Sbjct: 65  -----------------FRILAPTTYIFFASAIPVITFGEQLERDTDGKITAVQTL 74

The following BLAST results are available for this feature:

BLAST of Lcy12g011730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1P7	2.2e-22	50.42	Probable boron transporter 2 OS=Arabidopsis thaliana OX=3702 GN=BOR2 PE=2 SV=1	[more]
Q8VYR7	3.8e-22	50.42	Boron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=BOR1 PE=1 SV=1	[more]
Q93Z13	3.7e-17	44.83	Probable boron transporter 3 OS=Arabidopsis thaliana OX=3702 GN=BOR3 PE=1 SV=1	[more]
Q9XI23	1.4e-11	37.50	Boron transporter 4 OS=Arabidopsis thaliana OX=3702 GN=BOR4 PE=2 SV=1	[more]
Q9SSG5	2.0e-10	35.40	Putative boron transporter 5 OS=Arabidopsis thaliana OX=3702 GN=BOR5 PE=3 SV=1	[more]

BLAST of Lcy12g011730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438F6U6	2.9e-25	57.98	Putative boron transporter 2 OS=Vitis vinifera OX=29760 GN=BOR2_1 PE=3 SV=1	[more]
A0A2N9EIC4	3.0e-22	50.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2415 PE=3 SV=1	[more]
A0A438EZL4	2.6e-21	53.78	Putative boron transporter 2 OS=Vitis vinifera OX=29760 GN=BOR2_3 PE=3 SV=1	[more]
A0A438KAW6	2.6e-21	53.78	Boron transporter 1 OS=Vitis vinifera OX=29760 GN=BOR1_0 PE=3 SV=1	[more]
A0A059B5N8	4.4e-21	52.94	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04094 PE=3 SV...	[more]

BLAST of Lcy12g011730 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW55671.1	6.1e-25	57.98	putative boron transporter 2 [Vitis vinifera]	[more]
RVX18344.1	5.3e-21	53.78	Boron transporter 1 [Vitis vinifera]	[more]
RVW53126.1	5.3e-21	53.78	putative boron transporter 2 [Vitis vinifera]	[more]
KAG6472921.1	9.1e-21	52.94	hypothetical protein ZIOFF_070399 [Zingiber officinale]	[more]
XP_008447454.1	9.1e-21	53.78	PREDICTED: boron transporter 1 [Cucumis melo] >KAA0038108.1 boron transporter 1 ...	[more]

BLAST of Lcy12g011730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62270.1	1.6e-23	50.42	HCO3- transporter family	[more]
AT2G47160.1	2.7e-23	50.42	HCO3- transporter family	[more]
AT2G47160.2	1.8e-19	43.94	HCO3- transporter family	[more]
AT3G06450.1	2.6e-18	44.83	HCO3- transporter family	[more]
AT3G06450.2	2.6e-18	44.83	HCO3- transporter family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003020	Bicarbonate transporter, eukaryotic	PANTHER	PTHR11453	ANION EXCHANGE PROTEIN	coord: 1..36
IPR003020	Bicarbonate transporter, eukaryotic	PANTHER	PTHR11453	ANION EXCHANGE PROTEIN	coord: 78..119
None	No IPR available	PANTHER	PTHR11453:SF100	BORON TRANSPORTER 2-RELATED	coord: 1..36
None	No IPR available	PANTHER	PTHR11453:SF100	BORON TRANSPORTER 2-RELATED	coord: 78..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g011730.1	Lcy12g011730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006820	anion transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005452	inorganic anion exchanger activity