Lcy12g009360 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g009360
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RPM1-interacting protein 4 (RIN4) family protein
Location	Chr12: 36144872 .. 36146728 (-)
RNA-Seq Expression	Lcy12g009360
Synteny	Lcy12g009360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGATTTCCGTATCCAATAAGCCCACTTTTAGCCCAATTTACAAAAGTCGCCTCTTCTCTCTTTCTCAATCCGTCTGTGCTATTTTCTCTCTTTGATTGATTTGAAATTCGTTTCTTTTTTTTCTCAGAAATCCTTCTCTCTAGAATTCATGACGGTATGTCATCGCTTGATTTCTGCTTCTCAAGGATATTGTTTATGATTTTTGCTTTGATGTGCTTCTCGATCGGTTTGAGCTTTACTTCCTGCTGAATTTCCCTTTCCTTGATTCGATTTGTCTATTCATTTGATTTCCTTCTAGATTGTTCAATTCTGCACTTCTATGACTTCCACTTTGATTTGTTTATTCGTTTTCCTGATGTTGAAGCTGATTGATTCTGTTCTAGTTATATTGGGGCAAGAATATGGATTTTCTGCTAGATTTTAATTAGTTGTTGGATGTCGTTTCTGAACTTTGAATCAATAAATTCGCTGGCTACATTCGAGTATATTATGTTGTTGGATTAACTGCTGTTGGAGGAAACTTTTTCTTGTTGGTGTTTTTTGTTTTGTTTGATTGATTCATATCGGATTTGAAGGTGCTTGTAAAATCCGTGGCCATAAAGCAATGTTGTATAGTAATTGATGGTGATTGTTAGATTCATAGTCCGATTAGTGAGGAAAGCTACCAGATTCACGGAGGGTACATCTTGTTGTTCTCTCTTTTTGTAGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGGTTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGTGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAAGGCAGGCCTCGAGCAGATCCTGCTGCCAAGGCACCGTCTGTAAGATATCATTCATAATCCTTTTTCAATTTTTGCCGTTGGATGATTGTCGTAGCTAGCCTAGAGTACTTGGCATCTAAAGAATGCTTCTTTTGCACCTTTGGAGAATTGTTTGGTTTATTAGTCAATGAATTTCTTAGAGCGTTGCTTCTGATAAGTGTGAGTATGTATGTATGTACATAACTACATATATCTGCATTGAGGTTTGTTCAAACTCCTGGGAAATATCTTCATCTGGAATTGTAACATGTTGATAAAGTACCTGGAATTTAGGTTTTAGGAGAGATGGATCACATCATTTAATGTAATAAAATTAATATCTGCTTGATTTTATATACCTTGTCAAGAACTTTGTGTTCATGTAACACGAGTTCCCTAGTTTTATTTGTCTTTGAGAGGACTCTGGTTCTTGTTGCATAAATGTAGGCCTTCAAATGTAATGACTTCATCTCGGTGCGGCATTTATTCCTTTTTGGTTGTTATTTGTATAAAACGAATCATCTGCAGTTTTGCCTTACATATTGTATTTACAAGTTTTCTTTGGACTTTTTTTCCTCATGTGGATGCTGATTATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCGTTAAGAAGCCTCAGTTGAAAAACATATTATTCTGTAATTGTGTCTGCTGTGGTTTCTCAAATACGATGAACTTTCGTGGAGCCTTGATGGTCCTGTTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTTGTTGTGGAGGAAAAAGTAAAGAAGATGAACATGTATTGTATTTATATTATTGATATGGTGGTTTCTTATTATTAGAGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGATATAATTAATGTAATACGGACTTTTGCTTTTCTTTCAA

mRNA sequence

GAAAGGATTTCCGTATCCAATAAGCCCACTTTTAGCCCAATTTACAAAAGTCGCCTCTTCTCTCTTTCTCAATCCGTCTGTGCTATTTTCTCTCTTTGATTGATTTGAAATTCGTTTCTTTTTTTTCTCAGAAATCCTTCTCTCTAGAATTCATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGGTTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGTGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAAGGCAGGCCTCGAGCAGATCCTGCTGCCAAGGCACCGTCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCGTTAAGAAGCCTCAGTTGAAAAACATATTATTCTGTAATTGTGTCTGCTGTGGTTTCTCAAATACGATGAACTTTCGTGGAGCCTTGATGGTCCTGTTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTTGTTGTGGAGGAAAAAGTAAAGAAGATGAACATGTATTGTATTTATATTATTGATATGGTGGTTTCTTATTATTAGAGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGATATAATTAATGTAATACGGACTTTTGCTTTTCTTTCAA

Coding sequence (CDS)

ATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGGTTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGTGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAAGGCAGGCCTCGAGCAGATCCTGCTGCCAAGGCACCGTCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGA

Protein sequence

MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSKKWLCCIQSPPAES

Homology

[Close]

BLAST of Lcy12g009360 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 5.8e-25
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---D 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   D
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGK-SSEGHVKSGGGD 60

Query: 61 PAAKAPSKKWLCCIQSPPAES 79
          P+   P KKWLCC+Q+P  +S
Sbjct: 61 PSKPQP-KKWLCCMQAPAVDS 79

[Close]

BLAST of Lcy12g009360 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKA 62
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G        V    R     +++ 
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG------ANVSGSSRTPTHQSSRN 202

Query: 63  PSKKWLCC 71
           P+    CC
Sbjct: 203 PNNTSSCC 204

[Close]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL
Match: A0A6J1CEA3 (RPM1-interacting protein 4 OS=Momordica charantia OX=3673 GN=LOC111010436 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-34
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRP ADP +
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADP-S 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL
Match: A0A6J1ID15 (uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474733 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-34
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP A
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL
Match: A0A6J1FE40 (uncharacterized protein LOC111443250 OS=Cucurbita moschata OX=3662 GN=LOC111443250 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-34
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP A
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL
Match: A0A6J1J2H2 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111480718 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRP A+P A
Sbjct: 1  MADKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGANP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL
Match: A0A6J1FL74 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111446421 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRP A+P A
Sbjct: 1  MADKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGANP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. NCBI nr
Match: XP_038897827.1 (protein NOI4 [Benincasa hispida])

HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP ADP A
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. NCBI nr
Match: XP_022139562.1 (RPM1-interacting protein 4 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRP ADP +
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADP-S 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. NCBI nr
Match: XP_022936748.1 (uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 uncharacterized protein LOC111474733 isoform X2 [Cucurbita maxima] >XP_023535778.1 uncharacterized protein LOC111797108 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6592101.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP A
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. NCBI nr
Match: XP_022941007.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-interacting protein 4-like [Cucurbita maxima] >XP_023525056.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo] >KAG6607743.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRP A+P A
Sbjct: 1  MADKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGANP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSPPAES
Sbjct: 61 KAPPKKWLCCIQSPPAES 77

[Close]

BLAST of Lcy12g009360 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 71/78 (91.03%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP A
Sbjct: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDP-A 60

Query: 61 KAPSKKWLCCIQSPPAES 79
          KAP KKWLCCIQSP AES
Sbjct: 61 KAPPKKWLCCIQSPTAES 77

[Close]

BLAST of Lcy12g009360 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-25
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPA 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGK-SSEGHVKSGGGDPS 78

Query: 63 AKAPSKKWLCCIQSPPAES 79
             P KKWLCC+Q+P  +S
Sbjct: 79 KPQP-KKWLCCMQAPAVDS 95

[Close]

BLAST of Lcy12g009360 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 107.1 bits (266), Expect = 6.6e-24
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAA 60
          M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G  +     
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGK-DEPGYNKNGEVL 60

Query: 61 KAPSKKWLCCIQS 74
          + P+KKW CCI++
Sbjct: 61 EKPAKKWFCCIRA 72

[Close]

BLAST of Lcy12g009360 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 1  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---D 60
          M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   D
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGK-SSEGHVKSGGGD 60

Query: 61 PAAKAPSKK 67
          P+   P KK
Sbjct: 61 PSKPQPVKK 68

[Close]

BLAST of Lcy12g009360 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-20
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPA 62
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGK-SSEGHVKSGGGDPS 78

Query: 63 AKAPSKK 67
             P KK
Sbjct: 79 KPQPVKK 84

[Close]

BLAST of Lcy12g009360 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-13
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSK 65
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +Q R   + +   P+K
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKT----NASGRAASQRRDN-NKSQDEPTK 72

Query: 66 KWLCC 71
          K  CC
Sbjct: 73 KRFCC 72

The following BLAST results are available for this feature:

BLAST of Lcy12g009360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	5.8e-25	70.37	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	2.7e-06	36.76	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Lcy12g009360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEA3	5.5e-34	93.59	RPM1-interacting protein 4 OS=Momordica charantia OX=3673 GN=LOC111010436 PE=4 S...	[more]
A0A6J1ID15	7.1e-34	94.87	uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FE40	7.1e-34	94.87	uncharacterized protein LOC111443250 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A6J1J2H2	1.2e-33	93.59	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111480718 PE=4...	[more]
A0A6J1FL74	1.2e-33	93.59	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111446421 PE...	[more]

BLAST of Lcy12g009360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897827.1	5.1e-34	94.87	protein NOI4 [Benincasa hispida]	[more]
XP_022139562.1	1.1e-33	93.59	RPM1-interacting protein 4 [Momordica charantia]	[more]
XP_022936748.1	1.5e-33	94.87	uncharacterized protein LOC111443250 [Cucurbita moschata] >XP_022975427.1 unchar...	[more]
XP_022941007.1	2.5e-33	93.59	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022981664.1 RPM1-intera...	[more]
XP_008463015.1	1.4e-31	91.03	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]

BLAST of Lcy12g009360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	2.7e-25	70.89	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	6.6e-24	69.86	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	3.1e-21	72.46	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	2.0e-20	73.13	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	1.4e-13	58.46	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..38 e-value: 8.4E-23 score: 79.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..78
None	No IPR available	PANTHER	PTHR33159:SF64	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 1..76
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g009360.1	Lcy12g009360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane