Lcy12g009080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g009080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr12: 35676812 .. 35677519 (-)
RNA-Seq Expression	Lcy12g009080
Synteny	Lcy12g009080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTGGAGACCAAAATTCAGAGATATATTGTTGAGTTTATTTCGCAAGATGGCCAAGGGTCTGAAGAGAATACCTGTTCGCGGGAGAGGCGCTGTCAGCTGCATCCCGGAAGCTTCGTTGCAGATTCAGCGATTCGTTCTCCTCGTTCCGGCGATGACCAACGTCGAATGGTTTCTTGGATTCCTCCCCTAATTGGTTCCTGCAAGTTAAATTGTGATGCCACATGGAATCCAAGAATGCAAAGGGGTGGGATCGGGTGGATTCTCAGAGATTGGAACGGTTGCCCTTTGAGAGCGGGTTACAAAAGCGTGATTCATCGTTGGAAGATCAGTTGGCTGGAGGCCTTCTCTATCTGTGAAGCTCTTCATGAAATCCCTCTCGATTCCCCCCATTTTCAGATTGAAACGGATGCTCTTCAGGTGGTGAGATTGTTGTCCAACGTATCAGAAGATGCCACGGAACTAGAGGGATTCATCAATGAAGCACAAGCCCTAATGGAGCCCCTTCAAGTTGTGTCCATTAATCACACTTCAAGGCTTCATAATGGAATGGCCCATTTTTTAGCCCATAAGGCCTGTGAGTTAAATGAGTCTGGTGTATGGGCTGCTGAATTTCCTTTTTGGTTGTTGGATTTTAATTATCTCGATAGTGGGTATGATTATCATACTTGTAGTACCCTTTTGGGAGCTTCTGGTAGCTCTTAG

mRNA sequence

ATGTTGCTGGAGACCAAAATTCAGAGATATATTGTTGAGTTTATTTCGCAAGATGGCCAAGGGTCTGAAGAGAATACCTGTTCGCGGGAGAGGCGCTGTCAGCTGCATCCCGGAAGCTTCGTTGCAGATTCAGCGATTCGTTCTCCTCGTTCCGGCGATGACCAACGTCGAATGGTTTCTTGGATTCCTCCCCTAATTGGTTCCTGCAAGTTAAATTGTGATGCCACATGGAATCCAAGAATGCAAAGGGGTGGGATCGGGTGGATTCTCAGAGATTGGAACGGTTGCCCTTTGAGAGCGGGTTACAAAAGCGTGATTCATCGTTGGAAGATCAGTTGGCTGGAGGCCTTCTCTATCTGTGAAGCTCTTCATGAAATCCCTCTCGATTCCCCCCATTTTCAGATTGAAACGGATGCTCTTCAGGTGGTGAGATTGTTGTCCAACGTATCAGAAGATGCCACGGAACTAGAGGGATTCATCAATGAAGCACAAGCCCTAATGGAGCCCCTTCAAGTTGTGTCCATTAATCACACTTCAAGGCTTCATAATGGAATGGCCCATTTTTTAGCCCATAAGGCCTGTGAGTTAAATGAGTCTGGTGTATGGGCTGCTGAATTTCCTTTTTGGTTGTTGGATTTTAATTATCTCGATAGTGGGTATGATTATCATACTTGTAGTACCCTTTTGGGAGCTTCTGGTAGCTCTTAG

Coding sequence (CDS)

ATGTTGCTGGAGACCAAAATTCAGAGATATATTGTTGAGTTTATTTCGCAAGATGGCCAAGGGTCTGAAGAGAATACCTGTTCGCGGGAGAGGCGCTGTCAGCTGCATCCCGGAAGCTTCGTTGCAGATTCAGCGATTCGTTCTCCTCGTTCCGGCGATGACCAACGTCGAATGGTTTCTTGGATTCCTCCCCTAATTGGTTCCTGCAAGTTAAATTGTGATGCCACATGGAATCCAAGAATGCAAAGGGGTGGGATCGGGTGGATTCTCAGAGATTGGAACGGTTGCCCTTTGAGAGCGGGTTACAAAAGCGTGATTCATCGTTGGAAGATCAGTTGGCTGGAGGCCTTCTCTATCTGTGAAGCTCTTCATGAAATCCCTCTCGATTCCCCCCATTTTCAGATTGAAACGGATGCTCTTCAGGTGGTGAGATTGTTGTCCAACGTATCAGAAGATGCCACGGAACTAGAGGGATTCATCAATGAAGCACAAGCCCTAATGGAGCCCCTTCAAGTTGTGTCCATTAATCACACTTCAAGGCTTCATAATGGAATGGCCCATTTTTTAGCCCATAAGGCCTGTGAGTTAAATGAGTCTGGTGTATGGGCTGCTGAATTTCCTTTTTGGTTGTTGGATTTTAATTATCTCGATAGTGGGTATGATTATCATACTTGTAGTACCCTTTTGGGAGCTTCTGGTAGCTCTTAG

Protein sequence

MLLETKIQRYIVEFISQDGQGSEENTCSRERRCQLHPGSFVADSAIRSPRSGDDQRRMVSWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSICEALHEIPLDSPHFQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVVSINHTSRLHNGMAHFLAHKACELNESGVWAAEFPFWLLDFNYLDSGYDYHTCSTLLGASGSS

Homology

[Close]

BLAST of Lcy12g009080 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-18
Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 3   LETKIQRYIVEFISQDGQGSEENTCSRERRCQLHPGSFVADSAIRSPRSGDDQRRMVSWI 62
           ++  I RYI+     +  G + N   +     LH         IR  R GD+      W 
Sbjct: 38  IQLVIDRYII-----NSAGRDTNLKGKSANKDLH--------LIR--RIGDNTG--ARWK 97

Query: 63  PPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSICEA 122
           PP   S KLN DA W      GGIGWILRD  G  ++A  + +     I++LE  +ICE 
Sbjct: 98  PPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAICEG 157

Query: 123 LHEI------PLDSPH---FQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVV 182
           L  I      P+   H     +E+D+L+ + LL    +D TE+   + E   +ME +++V
Sbjct: 158 LRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMKIV 217

Query: 183 SINHTSRLHNGMAHFLAHKACE 196
           S+ H SR  N +AH LA +A E
Sbjct: 218 SMRHISREANKVAHDLARRAME 222

[Close]

BLAST of Lcy12g009080 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 62/182 (34.07%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 40  FVADSAIRSPRS----GDDQRRMVSWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNG 99
           FV +S+ +S  S           + W PP +    LN DA+W+    RGGIGWI+R W+G
Sbjct: 46  FVTESSYQSETSLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDG 105

Query: 100 CPLRAGYKSVIHRWKISWLEAFSICEALHEI-------PLDSPHFQIETDALQVVRLLSN 159
             + AG + V     +  LEA +I E L  +       PL      IETD+ +V  LL+ 
Sbjct: 106 DIVLAGNRFVEACNNVKLLEASAILEGLRNLTNLGVLRPL-----HIETDSAEVESLLNR 165

Query: 160 VSEDATELEGFINEAQALMEPLQVVSINHTSRLHNGMAHFLAHKACELNESGVWAAEFPF 211
             ED T+    + E   L +  ++++     R  NG AH LA +A  L ES +W   FP 
Sbjct: 166 KREDLTKTGWVVEEILNLRDSCEILAFAKVGRETNGCAHSLAQRASVLRESMIWVDCFPN 222

[Close]

BLAST of Lcy12g009080 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.3e-17
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 61  WIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSIC 120
           W PP   S KLN +A W      GGIGWILRD  G  ++A  + +     I++LE  +IC
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 121 EALHEIPLDSPH-FQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVVSINHTS 180
           E L  I  +      +E+D+L+ + LL    +D TE+   + E   +M+ +++VS+ H S
Sbjct: 139 EGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHIS 198

Query: 181 RLHNGMAHFLAHKACE 196
           R  N +AH LA +A E
Sbjct: 199 REANKVAHGLARRAME 214

[Close]

BLAST of Lcy12g009080 vs. ExPASy TrEMBL
Match: A0A6P5RC34 (uncharacterized protein LOC110744812 OS=Prunus avium OX=42229 GN=LOC110744812 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.5e-15
Identity = 56/168 (33.33%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 60  SWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSI 119
           +W  PL GS K NCD  W  + +RGG+GW++R   G  LRAG +      +I+W     +
Sbjct: 157 TWQKPLPGSVKANCDGAWVAQTKRGGVGWVIRSEWGELLRAGGR------RIAWCGTALV 216

Query: 120 CEA----------LHEIPLDSPHFQIETDALQVVRLLSNVSEDATELEGFINEAQALMEP 179
            EA          LH   L     ++E+D+ +++R++   S  ATE+EG + + Q L+  
Sbjct: 217 AEAEAIRDMLGICLHNGFLS---VEVESDSQEIIRMIRGDSLSATEIEGILFDIQVLVRR 276

Query: 180 LQVVSINHTSRLHNGMAHFLAHKACELNESGVWAAEFPFWLLDFNYLD 218
            Q V   H  RL N  AH +A        S VW    P WL     LD
Sbjct: 277 FQWVEFRHIPRLCNNAAHEVAAYFFRAGGSEVWDQSGPAWLHSVLALD 315

[Close]

BLAST of Lcy12g009080 vs. ExPASy TrEMBL
Match: A0A7J6ERF5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020551 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.5e-14
Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 0


Query: 61  WIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSIC 120
           WI P  G   +NCDA  N      G G+I R+W+G  L AG         +   EA++I 
Sbjct: 226 WIRPPAGYIAVNCDAAMNSGAAGIGTGFIWRNWDGKLLIAGMNYSNRCCSVDMAEAWAIL 285

Query: 121 EALHEIP--LDSPHFQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVVSINHT 180
           EAL+ +P   DSP  +I++D   +V  + N     T +   I++ +  ME L   SI H 
Sbjct: 286 EALNNMPNTTDSP-MEIQSDCKHLVDKIMNQDNHLTAVNTIIHQIRMQMEKLNCNSIVHV 345

Query: 181 SRLHNGMAHFLAHKACELNESGVWAAEFPFWLLDFNYLDS 219
           +R +N  AH LA K      + ++   FP WL  F   DS
Sbjct: 346 NRNNNECAHMLARKCLATKTTQIFTHPFPRWLAQFCTADS 384

[Close]

BLAST of Lcy12g009080 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-18
Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 3   LETKIQRYIVEFISQDGQGSEENTCSRERRCQLHPGSFVADSAIRSPRSGDDQRRMVSWI 62
           ++  I RYI+     +  G + N   +     LH         IR  R GD+      W 
Sbjct: 38  IQLVIDRYII-----NSAGRDTNLKGKSANKDLH--------LIR--RIGDNTG--ARWK 97

Query: 63  PPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSICEA 122
           PP   S KLN DA W      GGIGWILRD  G  ++A  + +     I++LE  +ICE 
Sbjct: 98  PPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAICEG 157

Query: 123 LHEI------PLDSPH---FQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVV 182
           L  I      P+   H     +E+D+L+ + LL    +D TE+   + E   +ME +++V
Sbjct: 158 LRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMKIV 217

Query: 183 SINHTSRLHNGMAHFLAHKACE 196
           S+ H SR  N +AH LA +A E
Sbjct: 218 SMRHISREANKVAHDLARRAME 222

[Close]

BLAST of Lcy12g009080 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-17
Identity = 62/182 (34.07%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 40  FVADSAIRSPRS----GDDQRRMVSWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNG 99
           FV +S+ +S  S           + W PP +    LN DA+W+    RGGIGWI+R W+G
Sbjct: 46  FVTESSYQSETSLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDG 105

Query: 100 CPLRAGYKSVIHRWKISWLEAFSICEALHEI-------PLDSPHFQIETDALQVVRLLSN 159
             + AG + V     +  LEA +I E L  +       PL      IETD+ +V  LL+ 
Sbjct: 106 DIVLAGNRFVEACNNVKLLEASAILEGLRNLTNLGVLRPL-----HIETDSAEVESLLNR 165

Query: 160 VSEDATELEGFINEAQALMEPLQVVSINHTSRLHNGMAHFLAHKACELNESGVWAAEFPF 211
             ED T+    + E   L +  ++++     R  NG AH LA +A  L ES +W   FP 
Sbjct: 166 KREDLTKTGWVVEEILNLRDSCEILAFAKVGRETNGCAHSLAQRASVLRESMIWVDCFPN 222

[Close]

BLAST of Lcy12g009080 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-16
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 61  WIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSIC 120
           W PP   S KLN +A W      GGIGWILRD  G  ++A  + +     I++LE  +IC
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 121 EALHEIPLDSPH-FQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVVSINHTS 180
           E L  I  +      +E+D+L+ + LL    +D TE+   + E   +M+ +++VS+ H S
Sbjct: 139 EGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHIS 198

Query: 181 RLHNGMAHFLAHKACE 196
           R  N +AH LA +A E
Sbjct: 199 REANKVAHGLARRAME 214

[Close]

BLAST of Lcy12g009080 vs. NCBI nr
Match: XP_021800524.1 (uncharacterized protein LOC110744812 [Prunus avium])

HSP 1 Score: 91.7 bits (226), Expect = 9.3e-15
Identity = 56/168 (33.33%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 60  SWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSI 119
           +W  PL GS K NCD  W  + +RGG+GW++R   G  LRAG +      +I+W     +
Sbjct: 157 TWQKPLPGSVKANCDGAWVAQTKRGGVGWVIRSEWGELLRAGGR------RIAWCGTALV 216

Query: 120 CEA----------LHEIPLDSPHFQIETDALQVVRLLSNVSEDATELEGFINEAQALMEP 179
            EA          LH   L     ++E+D+ +++R++   S  ATE+EG + + Q L+  
Sbjct: 217 AEAEAIRDMLGICLHNGFLS---VEVESDSQEIIRMIRGDSLSATEIEGILFDIQVLVRR 276

Query: 180 LQVVSINHTSRLHNGMAHFLAHKACELNESGVWAAEFPFWLLDFNYLD 218
            Q V   H  RL N  AH +A        S VW    P WL     LD
Sbjct: 277 FQWVEFRHIPRLCNNAAHEVAAYFFRAGGSEVWDQSGPAWLHSVLALD 315

[Close]

BLAST of Lcy12g009080 vs. NCBI nr
Match: XP_015388381.1 (uncharacterized protein LOC107178094 [Citrus sinensis])

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 0


Query: 20  QGSEENTCSRERRCQLHPGSF-----VADSAIRSPRSGDDQRRMVSWIPPLIGSCKLNCD 79
           +G + N      + ++  G+F     V D+A++S      ++    W PP  G+ K+N D
Sbjct: 21  EGKKVNHLISAAKAEVVVGAFQRVRKVGDNALKS----RSEKCKKQWEPPPFGTYKINVD 80

Query: 80  ATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFSI---CEALHEIPLDSP 139
           A  +   Q  G+G ++R  +G  + A  K+V  R ++ + EA  +    +   E  L S 
Sbjct: 81  AAIHVGSQTAGLGAVVRGSDGKIVLAAVKTVPFRGEVRYSEAEDVDWGVQVATEAKLQS- 140

Query: 140 HFQIETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVVSINHTSRLHNGMAHFLAH 199
              +ETD L+V  L++      TE+   I+E Q++   L+ V I HT R  N +AH LA 
Sbjct: 141 -VIVETDCLEVTNLVNKKLGSRTEIFWVISEIQSMCRQLEFVRIEHTPRTCNLVAHCLAK 200

Query: 200 KACELNESGVWAAEFPFWLLD 213
            A +  E  VWA E P  +LD
Sbjct: 201 FAIDFKEPAVWANEIPQAILD 215

[Close]

BLAST of Lcy12g009080 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 44/140 (31.43%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 59  VSWIPPLIGSCKLNCDATWNPRMQRGGIGWILRDWNGCPLRAGYKSVIHRWKISWLEAFS 118
           V W  P     K N DATW     R GIGWILR+ +G  L  G +++     +  LEA  
Sbjct: 135 VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNV--LEA-- 194

Query: 119 ICEALHEIPLDSPHFQ-----IETDALQVVRLLSNVSEDATELEGFINEAQALMEPLQVV 178
             EAL    L    F       E+DA  +V LL N  +    L+  + + Q L+   + V
Sbjct: 195 ELEALRWAVLTMSRFNYKRIIFESDAQALVNLL-NSDDFWPTLQPALEDIQQLLHHFEEV 254

Query: 179 SINHTSRLHNGMAHFLAHKA 194
               T R  N +A  +A ++
Sbjct: 255 KFEFTPRGGNKVADRIARES 269

[Close]

BLAST of Lcy12g009080 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-06
Identity = 40/145 (27.59%), Postives = 59/145 (40.69%), Query Frame = 0


Query: 61  WIPPLIGSCKLNCDATWNPRMQRGGIGWILRD------WNGCPLRAGYKSVIH------R 120
           W PP     K N DATWN   +R GIGW+LR+      W G       KSV+       R
Sbjct: 420 WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMR 479

Query: 121 WKISWLEAFSICEALHEIPLDSPHFQIETDALQVVRLLSNVSEDATELEGFINEAQALME 180
           W +  L  F     +            E+D+  ++ +L+N  E    L+  I + Q L+ 
Sbjct: 480 WAVLSLSRFQYNYVI-----------FESDSQVLIEILNN-DEIWPSLKPTIQDLQRLLS 539

Query: 181 PLQVVSINHTSRLHNGMAHFLAHKA 194
               V      R  N +A  +A ++
Sbjct: 540 QFTEVKFVFIPREGNTLAERVARES 552

The following BLAST results are available for this feature:

BLAST of Lcy12g009080 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g009080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSV1	2.0e-18	33.17	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DNV9	1.7e-17	34.07	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CP26	6.3e-17	36.76	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6P5RC34	4.5e-15	33.33	uncharacterized protein LOC110744812 OS=Prunus avium OX=42229 GN=LOC110744812 PE...	[more]
A0A7J6ERF5	6.5e-14	33.75	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020551 PE=4 SV=1	[more]

BLAST of Lcy12g009080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156777.1	4.0e-18	33.17	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_022155262.1	3.4e-17	34.07	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143535.1	1.3e-16	36.76	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_021800524.1	9.3e-15	33.33	uncharacterized protein LOC110744812 [Prunus avium]	[more]
XP_015388381.1	1.3e-13	30.35	uncharacterized protein LOC107178094 [Citrus sinensis]	[more]

BLAST of Lcy12g009080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	2.2e-06	31.43	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	3.8e-06	27.59	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 72..193 e-value: 7.7E-17 score: 61.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 67..195 e-value: 4.2E-10 score: 41.8
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 58..209
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 58..209
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 71..191 e-value: 8.74422E-17 score: 71.9616
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 69..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g009080.1	Lcy12g009080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity