Lcy12g007850 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGGTTGGATAGGTTACTAGTTAACCACGAGCTGGCTCTCTCCTTTAAAAGCCCTTAAGATTCAACATCTAAATTTTGGTTCACCAGACCATAGGCCAATCTTGGCGACTCTAGAGGATAAAGAGCAGAAAAGGGCTGTACGGAAAAAATGCAGGAAATTTGAAGAATCCTGGGTTGGTGGTCCTGATTGTAGGAAGATTGTTGAAGAAGTTTGGAGAAAAGGAGAAGGAAGGGATCCTGCCTCCTACTCGAGGAAAATTTACCAATGTTTTTCCAACTTAATTAAATGGAACAAGGATAGACTGGGGGCTCTATTCAGAAAACGGTAGAAAGAAAGAGGGAAGAAATTTATCTCCTTGACAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTCATTATATCTCCTAACCAAGCAGCTTTTGTCCCTAAGAGACTCATTTCTGATAATGTTATTTTGGGCTTTGAATGTATCCATTCCCTCAATAGTAAAAGAAAAGGAAAAACGGAGCACATCGCCATGAAACTCGATAAGAGTAAGGCCTACAATAGAGTGGAGTGGGCCTTCGTTCAAAAGCTTATGATCAAGATGGGTTTCTTAGAAGATTGGGTCGGAAAAATCATGGACTGCATCTCTTCAGTGGTGTACTTAGTGCTTATAAACGGAGAACCCCAAGAAGCTTTCATTCCCATGAGAGGGCTAAGGCAGGGAGACCCCATCTCCCCCTACATCTTCTTGATCTGCACTGAAGGTTTATCGGCTCTTCTTTTCAGGGAAGAATCTTTAAACAATTTTTATGGTTTAAAGTTAATAAACGTTGCCCCTCACTTTCCCATTTGTTTTTTTTGCAAATGACAGCCTTATTCTTTGCAGGGCTGAAGAAAAAAACTATCACACGATTAAGAGGATCCTGAACACTTACGAGGAAGCTTTGGGCCAAACCATTAACTTATCCAAATCCTCCTTCATGGCTAGTAAAAACATCAACCAGGCCAAAATTAGGAGGTTGGGAGATATTCTTGGCATCTCAAAGGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGGTATTGTTAAAAAAGTCAGGGACCGAATATGGAATGCCCTTCTGACGGGACCTCAGGAGGGTGTCGAATTCTCCGAGGTCCGTGGTCAAATAAATTTATATTCCACAACTCCTAAAGCTAGCTTGTAGTAGTAGTGGTCGAGGTCGAACACAGGGAGCACGATTGTTAATTCATCTTAATCAGGTTTATTGCGATGACGGGACTAAGAAAAGGGGGTTGGATTTGGATAGATTGAATGCAAGGAAATATAAAATACTGAAAATTAAATTGCAGGAAAGTAAAGATAGGAAAGTAAAGGGGTGGTTGGTTAATCTTACCTTGTCAATCACTGTAGCTAGAGACACTCGGATTCAGTACATTCGTTTTCACTCATCGATTAGCAGATAATGATTTACATGCATGCTGTCTATAGGTACTCTAAATCAATTGACTCGATCTCAACGTCCATCACTCAATTACTAGCTATTAATCAACTAACCTCACGAACCCGTTAAGTTAATTAATTAAGCAACTGCATTAAGAACTAGATACCCCTAGAGCACTAACCCAACGGACCCGTTGAACTAACATGCAATTAATCAATAAACTAACCTGGACATATGATAAGGGTAAAAAATATACCTATTTTGCCCTTATTCTTAGCTCATTTCTTGGTCAAATGTTGTATGTTTTGGTCAATTTTACTATTTTCGAGCTCAAAATATGTTAAAATTACTAAGTTAGGGTGTTGAGAGTCACTTTTGTCAAATTATGCTTATTTGTGCTTAAAAAAACTTGATTTGAAGAGAATTTGACTTAGTTTGCTGTTGTGCAGAAAAACAGAGGAAAAACTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATTGAAATGCGACCGCATTTCTGGAAAAATCAGAGGTCGTTCTGAGTCGTACGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGACCGTTTTGATGCCGAAACTGACTAGGCAACCTTCCAGCACCTATTTCGAAGCTTCTCAACCAATTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGTTCGACGCCAATGAGTAAGGATGCCCGAGGTCCTTCTTAGATGACCAAATTCTGACCCGAGAGAGAGTTAGACATCAAACCTTGTGGTTTGTAGAGAGTTTCACCCATTCCCACCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAATTGAAAAACCCATAATATTTAGCTATCTCCTTTATTTCCAGCTCTTGAATCTTTTCATTATTCTGTGTTATTTACATTCTTATCTCAATGAAAATGTGTTCATTTGTTTTTTATCCCATCATGAGTAGCTAAATCCCGTTGAGGGGTTTGATGTGGTGAATTCCCTTATGGTTTAATGGCTTGAAAGTGTTTTATTTGCTTAAGTTGTGTTTAATGCATGTCATTCTTTATTGATTATCACTCTAATCTTGTTGAGTTTAACTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAAGGGACAAACGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTAGAAAGAGATTGTTCGGTGGTATAGAGCAAGCTGCCTAAGGCACTCTATATCGACTATAGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAAAAATGTGCATAATGGTACTCGCTTAGCCTTCTTACGGTTCTTGGAAATAAGTGCCAAAAGGGAGTTAAATCTGACCTAATGCATTGAATATGCTTAAGTTAAATATTGCATGAGTATGGTTGTTACCTTAGGGATGAATCCATGTTGAACACCTCGTTTGTTTATTATTGTTATTCTTTATTATTTATTATTGCTTGTTTTATCTATCTTTTCAAAAAACCAATCAATCAACTTATTTTCTTTGGTTACCTTTTCAAAAGCAATCATTTGAGCAGTTTCTTATTCAAATATGAATTTCCAATTTAGTCCTCGTGGGATCGATACCATTGGAATACTTTCTAAGGTTTTTTATTACTACGTGTGACAGTGTATACTTGCACTTAAGTGTTGGCTGAATAATTCTCTGTTATTATTATTTCATCTTATCTCTCATTCCATCCATTCAGTTCACACGTCGCACCAACACAGTCAATAAATCAATTAATCGTTGCTCTAGACTAGAACACTCAAAATCAACTAGAGAGATCTAATTAATCACAAGTATCGACTTAGACCCTAAATCTATCGTGTCAGCAACAAAGTCAAAGTCTGCTCTTGGGACCCGTGCTCACGAATCAATCTAATGCTAACTATTGAATTAACTATCCATTAGCTAAGTGGAAATCAATTCTTTAGCAAGTTATTAACATATGAGTTGCGAGTTAGGGCGTCAATCTAACCTACTGCGCATGCTAATTATAAAAGCGGGAATCTAAAGCCACAACAACAAATAAACCATGCATAAAGTTCAAGAATCTCAAGATAAACAGCAAATCAGCTCGAAATACTCATGAATCTCATAAAAAAATACGAATGTACTTACAATCCTGAGGTCCCAACTACAACGAACGGTGCTTAGACGACCATAGACAAGCCTAAACTAAGCCCAAGGCTCGAGAAACCAACCTAATCTAGAAAGAAACTATAAAATACAAGGGAAGAATGAATGAAATCAAGCAAACCGAGAGAAAACGGCTGCTGAAAACTCCTTAATTAGATTTCCCCCTTCGAAGTTGCCCTAAAATTACAGCAGCTGCTGTTTAA ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGCAGCTGCTGTTTAA ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGCAGCTGCTGTTTAA MFGDEKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSVKERNDPKGDNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQILEVEDLGYYLGMPSQINRNKQAAAV Homology
BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17 Identity = 61/212 (28.77%), Postives = 111/212 (52.36%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12 Identity = 58/200 (29.00%), Postives = 99/200 (49.50%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10 Identity = 58/219 (26.48%), Postives = 98/219 (44.75%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A2N9IMR2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54769 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 1.9e-50 Identity = 117/276 (42.39%), Postives = 164/276 (59.42%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803PRV5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48 Identity = 116/268 (43.28%), Postives = 159/268 (59.33%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803Q8X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48 Identity = 103/209 (49.28%), Postives = 139/209 (66.51%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803PUH4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 4.0e-48 Identity = 110/248 (44.35%), Postives = 150/248 (60.48%), Query Frame = 0
BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47 Identity = 116/287 (40.42%), Postives = 164/287 (57.14%), Query Frame = 0
BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis]) HSP 1 Score: 207.6 bits (527), Expect = 1.5e-49 Identity = 119/312 (38.14%), Postives = 163/312 (52.24%), Query Frame = 0
BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber]) HSP 1 Score: 204.9 bits (520), Expect = 9.7e-49 Identity = 104/225 (46.22%), Postives = 150/225 (66.67%), Query Frame = 0
BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_030940247.1 (uncharacterized protein LOC115965211 [Quercus lobata]) HSP 1 Score: 204.5 bits (519), Expect = 1.3e-48 Identity = 113/298 (37.92%), Postives = 170/298 (57.05%), Query Frame = 0
BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 201.1 bits (510), Expect = 1.4e-47 Identity = 102/218 (46.79%), Postives = 144/218 (66.06%), Query Frame = 0
BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_042958141.1 (uncharacterized protein LOC122293703 [Carya illinoinensis]) HSP 1 Score: 198.4 bits (503), Expect = 9.1e-47 Identity = 115/273 (42.12%), Postives = 160/273 (58.61%), Query Frame = 0
BLAST of Lcy12g007850 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 8.2e-14 Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|