Lcy12g007850 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g007850
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr12: 32926696 .. 32931411 (+)
RNA-Seq ExpressionLcy12g007850
SyntenyLcy12g007850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGGTTGGATAGGTTACTAGTTAACCACGAGCTGGCTCTCTCCTTTAAAAGCCCTTAAGATTCAACATCTAAATTTTGGTTCACCAGACCATAGGCCAATCTTGGCGACTCTAGAGGATAAAGAGCAGAAAAGGGCTGTACGGAAAAAATGCAGGAAATTTGAAGAATCCTGGGTTGGTGGTCCTGATTGTAGGAAGATTGTTGAAGAAGTTTGGAGAAAAGGAGAAGGAAGGGATCCTGCCTCCTACTCGAGGAAAATTTACCAATGTTTTTCCAACTTAATTAAATGGAACAAGGATAGACTGGGGGCTCTATTCAGAAAACGGTAGAAAGAAAGAGGGAAGAAATTTATCTCCTTGACAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTCATTATATCTCCTAACCAAGCAGCTTTTGTCCCTAAGAGACTCATTTCTGATAATGTTATTTTGGGCTTTGAATGTATCCATTCCCTCAATAGTAAAAGAAAAGGAAAAACGGAGCACATCGCCATGAAACTCGATAAGAGTAAGGCCTACAATAGAGTGGAGTGGGCCTTCGTTCAAAAGCTTATGATCAAGATGGGTTTCTTAGAAGATTGGGTCGGAAAAATCATGGACTGCATCTCTTCAGTGGTGTACTTAGTGCTTATAAACGGAGAACCCCAAGAAGCTTTCATTCCCATGAGAGGGCTAAGGCAGGGAGACCCCATCTCCCCCTACATCTTCTTGATCTGCACTGAAGGTTTATCGGCTCTTCTTTTCAGGGAAGAATCTTTAAACAATTTTTATGGTTTAAAGTTAATAAACGTTGCCCCTCACTTTCCCATTTGTTTTTTTTGCAAATGACAGCCTTATTCTTTGCAGGGCTGAAGAAAAAAACTATCACACGATTAAGAGGATCCTGAACACTTACGAGGAAGCTTTGGGCCAAACCATTAACTTATCCAAATCCTCCTTCATGGCTAGTAAAAACATCAACCAGGCCAAAATTAGGAGGTTGGGAGATATTCTTGGCATCTCAAAGGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGGTATTGTTAAAAAAGTCAGGGACCGAATATGGAATGCCCTTCTGACGGGACCTCAGGAGGGTGTCGAATTCTCCGAGGTCCGTGGTCAAATAAATTTATATTCCACAACTCCTAAAGCTAGCTTGTAGTAGTAGTGGTCGAGGTCGAACACAGGGAGCACGATTGTTAATTCATCTTAATCAGGTTTATTGCGATGACGGGACTAAGAAAAGGGGGTTGGATTTGGATAGATTGAATGCAAGGAAATATAAAATACTGAAAATTAAATTGCAGGAAAGTAAAGATAGGAAAGTAAAGGGGTGGTTGGTTAATCTTACCTTGTCAATCACTGTAGCTAGAGACACTCGGATTCAGTACATTCGTTTTCACTCATCGATTAGCAGATAATGATTTACATGCATGCTGTCTATAGGTACTCTAAATCAATTGACTCGATCTCAACGTCCATCACTCAATTACTAGCTATTAATCAACTAACCTCACGAACCCGTTAAGTTAATTAATTAAGCAACTGCATTAAGAACTAGATACCCCTAGAGCACTAACCCAACGGACCCGTTGAACTAACATGCAATTAATCAATAAACTAACCTGGACATATGATAAGGGTAAAAAATATACCTATTTTGCCCTTATTCTTAGCTCATTTCTTGGTCAAATGTTGTATGTTTTGGTCAATTTTACTATTTTCGAGCTCAAAATATGTTAAAATTACTAAGTTAGGGTGTTGAGAGTCACTTTTGTCAAATTATGCTTATTTGTGCTTAAAAAAACTTGATTTGAAGAGAATTTGACTTAGTTTGCTGTTGTGCAGAAAAACAGAGGAAAAACTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATTGAAATGCGACCGCATTTCTGGAAAAATCAGAGGTCGTTCTGAGTCGTACGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGACCGTTTTGATGCCGAAACTGACTAGGCAACCTTCCAGCACCTATTTCGAAGCTTCTCAACCAATTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGTTCGACGCCAATGAGTAAGGATGCCCGAGGTCCTTCTTAGATGACCAAATTCTGACCCGAGAGAGAGTTAGACATCAAACCTTGTGGTTTGTAGAGAGTTTCACCCATTCCCACCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAATTGAAAAACCCATAATATTTAGCTATCTCCTTTATTTCCAGCTCTTGAATCTTTTCATTATTCTGTGTTATTTACATTCTTATCTCAATGAAAATGTGTTCATTTGTTTTTTATCCCATCATGAGTAGCTAAATCCCGTTGAGGGGTTTGATGTGGTGAATTCCCTTATGGTTTAATGGCTTGAAAGTGTTTTATTTGCTTAAGTTGTGTTTAATGCATGTCATTCTTTATTGATTATCACTCTAATCTTGTTGAGTTTAACTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAAGGGACAAACGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTAGAAAGAGATTGTTCGGTGGTATAGAGCAAGCTGCCTAAGGCACTCTATATCGACTATAGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAAAAATGTGCATAATGGTACTCGCTTAGCCTTCTTACGGTTCTTGGAAATAAGTGCCAAAAGGGAGTTAAATCTGACCTAATGCATTGAATATGCTTAAGTTAAATATTGCATGAGTATGGTTGTTACCTTAGGGATGAATCCATGTTGAACACCTCGTTTGTTTATTATTGTTATTCTTTATTATTTATTATTGCTTGTTTTATCTATCTTTTCAAAAAACCAATCAATCAACTTATTTTCTTTGGTTACCTTTTCAAAAGCAATCATTTGAGCAGTTTCTTATTCAAATATGAATTTCCAATTTAGTCCTCGTGGGATCGATACCATTGGAATACTTTCTAAGGTTTTTTATTACTACGTGTGACAGTGTATACTTGCACTTAAGTGTTGGCTGAATAATTCTCTGTTATTATTATTTCATCTTATCTCTCATTCCATCCATTCAGTTCACACGTCGCACCAACACAGTCAATAAATCAATTAATCGTTGCTCTAGACTAGAACACTCAAAATCAACTAGAGAGATCTAATTAATCACAAGTATCGACTTAGACCCTAAATCTATCGTGTCAGCAACAAAGTCAAAGTCTGCTCTTGGGACCCGTGCTCACGAATCAATCTAATGCTAACTATTGAATTAACTATCCATTAGCTAAGTGGAAATCAATTCTTTAGCAAGTTATTAACATATGAGTTGCGAGTTAGGGCGTCAATCTAACCTACTGCGCATGCTAATTATAAAAGCGGGAATCTAAAGCCACAACAACAAATAAACCATGCATAAAGTTCAAGAATCTCAAGATAAACAGCAAATCAGCTCGAAATACTCATGAATCTCATAAAAAAATACGAATGTACTTACAATCCTGAGGTCCCAACTACAACGAACGGTGCTTAGACGACCATAGACAAGCCTAAACTAAGCCCAAGGCTCGAGAAACCAACCTAATCTAGAAAGAAACTATAAAATACAAGGGAAGAATGAATGAAATCAAGCAAACCGAGAGAAAACGGCTGCTGAAAACTCCTTAATTAGATTTCCCCCTTCGAAGTTGCCCTAAAATTACAGCAGCTGCTGTTTAA

mRNA sequence

ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGCAGCTGCTGTTTAA

Coding sequence (CDS)

ATGTTTGGGGATGAGAAAGAAGAAGGCAACCCCAAATGTCAGCGGGGTATGGAGAATTTCAGGAATATGATCAACAAATGTAACCTTTTTGACCCAAGCTTTTCAGGAAGTAAATTCACTTGGCGGAAGTCAAAAAACGACCCCTCGAGTGTAAAGGAAAGAAATGATCCGAAAGGGGACAACCCCTCAATCTTTCAAGCGAAAAAAGATCTCGAGTGTTTACTAGATGAAGAAGAGAGGTATTGGAAGATTCGTTCTAGGGAGGACTGGCTCAAATGGGGAGACAGAAATACAAAGTGGTTTCACAACAAAGCATCGGAGAGAAGAAGGAAAAACGAAATAAAAAGAATTTTGGATGAACATGGGAGCTGGGTTGAAGAGAACAAGACAATAGGGCTGATTGCTACAAATTACTTCAAAAACCTATTTTCCACATCTAATCCAAAGGGGAGAAGTATGGAGAAGATCATGGACAGCACCCTTAAGTTAGTTTATGAAGCCCAAAACAGAAGACTCTCTAAACCTTTCACTAAAAGCGAGGTTGAGGGAGCGTTAAAAAACATGAATCCGACCAAGGCTCCTGGCAAAGATGGTATGCACGCCCTCTTTTTCCAGCAGTATTGGGATATAGTGGATGAGGAAACGTCAAGGATCTGCCTTGACATCTTAAATGACAAGAAAAGTGTGATGCCCTTTAACAAAATGCTTATAGCCCTTATTTCGAAGCTAAAATCTCCGAGATCCATGGCAGAATTTAGGCCCACAAGCCTGTGCAATGTAATTTATAAGATTGTGGCCAAGGCTCTAGCAAACAGAATGAAACAAATCTTGGAAGTAGAGGACCTAGGCTACTACCTTGGAATGCCCTCGCAGATAAATAGAAACAAGCAAGCAGCTGCTGTTTAA

Protein sequence

MFGDEKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSVKERNDPKGDNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQILEVEDLGYYLGMPSQINRNKQAAAV
Homology
BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 61/212 (28.77%), Postives = 111/212 (52.36%), Query Frame = 0

Query: 66  QAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWV 125
           + K+ L  +   + R   +RSR   L   DR +++F+    ++  + +I  +  E G+ +
Sbjct: 340 ERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPL 399

Query: 126 EENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGAL 185
           E+ + I   A ++++NLFS       + E++ D  L +V E +  RL  P T  E+  AL
Sbjct: 400 EDPEAIRDRARSFYQNLFSPDPISPDACEELWDG-LPVVSERRKERLETPITLDELSQAL 459

Query: 186 KNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKS 245
           + M   K+PG DG+   FFQ +WD +  +  R+  +     +  +   + +++L+ K   
Sbjct: 460 RLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGD 519

Query: 246 PRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
            R +  +RP SL +  YKIVAKA++ R+K +L
Sbjct: 520 LRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 550

BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12
Identity = 58/200 (29.00%), Postives = 99/200 (49.50%), Query Frame = 0

Query: 107 ERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDS-TLKLVY 166
           ++R KN+I  I ++ G    +   I      Y+K+L++        M+  +D+ TL  + 
Sbjct: 383 KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLN 442

Query: 167 EAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILN- 226
           + +   L++P T SE+   + ++   K+PG DG  A F+Q+Y     EE     L +   
Sbjct: 443 QEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRY----KEELVPFLLKLFQS 502

Query: 227 -DKKSVMP--FNKMLIALISKLKSPRSMAE-FRPTSLCNVIYKIVAKALANR----MKQI 286
            +K+ ++P  F +  I LI K     +  E FRP SL N+  KI+ K LANR    +K++
Sbjct: 503 IEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKL 562

Query: 287 LEVEDLGYYLGMPSQINRNK 297
           +  + +G+  GM    N  K
Sbjct: 563 IHHDQVGFIPGMQGWFNIRK 578

BLAST of Lcy12g007850 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 58/219 (26.48%), Postives = 98/219 (44.75%), Query Frame = 0

Query: 95  DRNTKWFHNKASE-----------RRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLF 154
           ++   WF  K ++            R K  I +I +E G    + + I     +++K L+
Sbjct: 367 NQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLY 426

Query: 155 STSNPKGRSMEKIMDS-TLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHAL 214
           ST       M+K +D   +  + + Q   L+ P +  E+E  + ++   K+PG DG  A 
Sbjct: 427 STKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAE 486

Query: 215 FFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISK-LKSPRSMAEFRPTSLCNVI 274
           F+Q + + +     ++   I  +      F +  I LI K  K P  +  FRP SL N+ 
Sbjct: 487 FYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNID 546

Query: 275 YKIVAKALANR----MKQILEVEDLGYYLGMPSQINRNK 297
            KI+ K LANR    +K I+  + +G+  GM    N  K
Sbjct: 547 AKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRK 585

BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A2N9IMR2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54769 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-50
Identity = 117/276 (42.39%), Postives = 164/276 (59.42%), Query Frame = 0

Query: 14  QRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSVKERNDPKGDNPSIFQ------- 73
           +R M  FR  ++ C L D  FSGS FTW  +++ P +   R D    N            
Sbjct: 481 ERQMRAFREALDYCGLIDLRFSGSSFTWCNNRDPPHTTWVRLDRGVANIEWLTRFHTRSG 540

Query: 74  -AKKDLEC----LLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEH 133
            A K L      LL +EE+ W+ RSR  WLK GDRNTK+FH +AS+RRR+N IKR+ D  
Sbjct: 541 GASKSLRIEINELLKKEEKMWRQRSRSTWLKEGDRNTKYFHGRASQRRRRNTIKRVRDSA 600

Query: 134 GSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEV 193
           G W E    +  +  +YF+ LF+TSNP  R++E+ ++ST  +V ++ N  LS+ FT +E 
Sbjct: 601 GIWQENEDQVARVFLDYFRTLFTTSNP--RNIEEAVESTPPIVTQSMNDSLSRDFTAAEA 660

Query: 194 EGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALIS 253
           E A+  M P+ APG DGM  LF++++W IV  +  +  L  LN  + +   N+  I LI 
Sbjct: 661 ELAISQMAPSTAPGPDGMPPLFYKKFWHIVGPDILKAVLSCLNSDQLLKSINQTYITLIP 720

Query: 254 KLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
           K+KSP  + EFRP SLCNV+YKI++K L NR+K IL
Sbjct: 721 KVKSPTRVTEFRPISLCNVLYKIISKVLVNRLKPIL 754

BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803PRV5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 116/268 (43.28%), Postives = 159/268 (59.33%), Query Frame = 0

Query: 41   WRKSKNDPSS--VKERND-----PKGDNPSIFQAKKDLE----CLLDEEERYWKIRSRED 100
            W KSK    S  +KE  D      +  N   +Q  +DLE      LD+EE++WK RSR  
Sbjct: 1042 WNKSKRQEMSRNLKEYEDKISLLSRSTNAKDWQHLEDLERKRNVWLDKEEKFWKQRSRAL 1101

Query: 101  WLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPK 160
            WLK GD+NTK+FH KAS R+ KN IK ++D+   W+ EN+ +G +A +YFK LF++  P 
Sbjct: 1102 WLKEGDKNTKFFHRKASNRKAKNTIKGLIDDWLQWITENQHMGKVACDYFKQLFTSHPPN 1161

Query: 161  GRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWD 220
               +E+        V +A N  L +PFTK EV  A+++++P KAPG  G+  LF+++YW 
Sbjct: 1162 QEVLEEFQRVIPHRVSQATNDYLLEPFTKEEVFKAMRDIHPQKAPGSGGLPGLFYRKYWS 1221

Query: 221  IVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKAL 280
            I+ EE S +CL ILN+   +   N  LI LI K+  P  M+EFRP SLCNVIYKI+AK L
Sbjct: 1222 IIGEEVSTVCLGILNEGMPIKDINDTLICLIPKISKPTRMSEFRPISLCNVIYKIIAKCL 1281

Query: 281  ANRMK----QILEVEDLGYYLGMPSQIN 294
            A RMK    Q++  E   +  G   Q N
Sbjct: 1282 AGRMKTSMHQVISEEQSAFVGGRLIQDN 1309

BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803Q8X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48
Identity = 103/209 (49.28%), Postives = 139/209 (66.51%), Query Frame = 0

Query: 70  DLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENK 129
           DL C+ ++ E YWK RSR  WLK GDRNTK+FH KAS+RR+KN I  + D+H  W    +
Sbjct: 205 DLNCVDEKNEVYWKQRSRALWLKHGDRNTKFFHYKASQRRKKNAIYGLFDDHQQWQTSFE 264

Query: 130 TIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMN 189
            I  I+ NYF+NLFS SN      + +       +   +NR+L +PF +++V+ AL  ++
Sbjct: 265 KITEISINYFQNLFSKSNRGVELYDTLHGCVPNRISYEENRKLLEPFDENDVKNALFQIH 324

Query: 190 PTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSM 249
           P KAPGKDG+ +LFFQ++WDIV  + +  CL+ILN  K     N+ LI LI K+K P  M
Sbjct: 325 PLKAPGKDGLPSLFFQKHWDIVGPDVTEACLEILNLNKDCRSLNETLICLIPKVKQPTKM 384

Query: 250 AEFRPTSLCNVIYKIVAKALANRMKQILE 279
           +EFRP SLCNV+YK+VAK LANRMK  L+
Sbjct: 385 SEFRPISLCNVVYKVVAKCLANRMKGSLD 413

BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A803PUH4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-48
Identity = 110/248 (44.35%), Postives = 150/248 (60.48%), Query Frame = 0

Query: 41  WRKSKNDPSS--VKERND-----PKGDNPSIFQAKKDLE----CLLDEEERYWKIRSRED 100
           W KS+       +KE  D      +  N   +Q  KDLE     LLD+EE++W+ RSR  
Sbjct: 691 WNKSRKAEMKHRLKEYEDKITILSRSTNNKDWQYLKDLEQKNNVLLDKEEKFWRQRSRAI 750

Query: 101 WLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPK 160
           WLK GDRNTK+FH KA+ R+RKN I  +LD +G WV  NK +G +A  YF+ LF++++  
Sbjct: 751 WLKEGDRNTKYFHRKANTRKRKNTILGLLDSNGKWVHGNKMVGQVACLYFQQLFTSNSAS 810

Query: 161 GRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWD 220
              +++        +    N  L  PFTK +V  A++N++P KAPG DGM  LF++ YW 
Sbjct: 811 IADLDEFQRIVPNKISREMNEYLKAPFTKEDVHAAMRNIHPHKAPGSDGMPGLFYRLYWP 870

Query: 221 IVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKAL 278
            + EE +++CL ILN+ + +   N  LI LI K++ P  MA FRP SLCNVIYKIVAK L
Sbjct: 871 KIGEEVTKVCLGILNEGRPLNEINDTLICLIPKIEKPTRMANFRPISLCNVIYKIVAKCL 930

BLAST of Lcy12g007850 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47
Identity = 116/287 (40.42%), Postives = 164/287 (57.14%), Query Frame = 0

Query: 2   FGDEKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSK--NDPSSVKERND--- 61
           +GD   EG+P           ++ K  L   S  G    W + +  +  SS+K + +   
Sbjct: 130 WGDGVTEGSPMFM--------VVEKMKLCRTSLIG----WSRERFGSLASSIKRKREQLQ 189

Query: 62  ------PKGDNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRR 121
                 P G +  I + + DL  LL++EE +W+ RSR  W+  GD+NTK+FH + +ERRR
Sbjct: 190 HLINETPSGFSTGILELQDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFHAQCNERRR 249

Query: 122 KNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNR 181
            N I  + D  G W  E   I  IA +YF+ +F++SNP   S+  ++     +V  A N 
Sbjct: 250 TNHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMND 309

Query: 182 RLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVM 241
           +L   FTK EV  ALK M PTKAPG DGM A+F+Q YWDIV  E ++  L IL+    + 
Sbjct: 310 QLQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLR 369

Query: 242 PFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
             N   IALI K+K+P ++ +FRP SLCNVIYKIV+K LANR+K++L
Sbjct: 370 KINYTHIALIPKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVL 404

BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis])

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-49
Identity = 119/312 (38.14%), Postives = 163/312 (52.24%), Query Frame = 0

Query: 4   DEKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSV--KERNDPKGD- 63
           +EK  GN +    +  FR  +  C L D    G  FTW   +N+   +  K+  +  G+ 
Sbjct: 145 NEKVGGNERNPSRVHEFRQAVRDCRLLDLGLKGYPFTWSNRRNEAKILFNKKARESLGEL 204

Query: 64  ----------------------------------NPSIFQAKKDLECLLDEEERYWKIRS 123
                                                + + +  ++ +L +EE +WK RS
Sbjct: 205 QLWSKKEFGGRQKQLEQLQNKLKSIRHSFSHYDCGDELKKTENQIDNILQDEEIFWKQRS 264

Query: 124 REDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTS 183
           R DWLK GD+NTK+FH KAS RR+KN I  ILDE G W E++  +  I   +F  LFST+
Sbjct: 265 RADWLKEGDKNTKFFHAKASARRKKNRIGGILDEQGKWTEDSDEVERIFCEHFTTLFSTT 324

Query: 184 NPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQ 243
            P    M+     T   V E  N +L  PF + E+  AL  M PTKAPG DG+ A FFQ+
Sbjct: 325 APTAEQMDAAFKDTSAKVNEEMNFQLDAPFMEEEIVEALAQMCPTKAPGPDGLPAAFFQK 384

Query: 244 YWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVA 279
           +W  V E     CL ILNDK ++ P N   IALI K   P+S++EFRP SLCNVIY+I+A
Sbjct: 385 HWGSVKEGVITTCLHILNDKGNLAPLNHTYIALIPKTTKPKSVSEFRPISLCNVIYRIIA 444

BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 204.9 bits (520), Expect = 9.7e-49
Identity = 104/225 (46.22%), Postives = 150/225 (66.67%), Query Frame = 0

Query: 53  ERNDPKGDNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKN 112
           +RN   G    I   +K++  LLD EE  W+ RSR  WL  GDRNTK+FH KAS+RRR+N
Sbjct: 149 DRNGSLGG--EINMLRKEINELLDSEEIKWQQRSRVQWLGLGDRNTKYFHTKASDRRRRN 208

Query: 113 EIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRL 172
            I  I+DE+G+W +  + I  +A +YF+ ++S+S P    + +++D+    V E  N  L
Sbjct: 209 TINGIMDENGNWQDSTEGIAKVAVSYFQTIYSSSVP--TRISEVLDAIPTTVTEEMNHSL 268

Query: 173 SKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPF 232
            + FT+ E+E AL  M+PTKAPG DGM A+FFQ+YW+IV  +   + LD+LN   S++  
Sbjct: 269 IQEFTREEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVEI 328

Query: 233 NKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
           NK  I L+ K+K+P  M++FRP SLCNV+YK+++K LANR+K IL
Sbjct: 329 NKTNITLVPKIKNPTKMSDFRPISLCNVVYKLISKVLANRLKNIL 369

BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_030940247.1 (uncharacterized protein LOC115965211 [Quercus lobata])

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-48
Identity = 113/298 (37.92%), Postives = 170/298 (57.05%), Query Frame = 0

Query: 5   EKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSVKERND-------- 64
           EK+ G  + +  M +FR ++++C   D  FSG KFTW K       V ER D        
Sbjct: 261 EKKGGRARPEVQMRDFREILDECGFADLGFSGQKFTWCKRLAGGVMVWERLDRAVANQEW 320

Query: 65  -----------------PKGDNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTK 124
                              G+   +   K +L  LL +EE+ W+ RS+  WLK GD+NT+
Sbjct: 321 ISMFPGYSIKVAEGEEVRSGNGDQLHVLKVELRELLIKEEKLWQQRSKLHWLKEGDQNTR 380

Query: 125 WFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDS 184
           +FH KAS+R RKN IKR+ +++G W +    I  +  +Y+  LF+TSNP    + +++++
Sbjct: 381 YFHGKASQRYRKNCIKRLRNQNGEWFDGEDQIAQLFIDYYSELFTTSNPS--QLAEVLEN 440

Query: 185 TLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRIC 244
             ++V ++ N  L KPF K EV+ ALK M P KAPG DGM  +F+Q YWD + ++ S + 
Sbjct: 441 IPQVVSDSMNADLVKPFVKQEVDVALKQMAPLKAPGPDGMPLIFYQHYWDSIGDDVSCVV 500

Query: 245 LDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
           L  LN        N   I LI K+K+P S+++FRP SLCN++YK+++K LANR+K +L
Sbjct: 501 LSCLNSGSIPASLNHTHITLIPKIKNPESVSDFRPISLCNILYKLISKVLANRLKTLL 556

BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-47
Identity = 102/218 (46.79%), Postives = 144/218 (66.06%), Query Frame = 0

Query: 60  DNPSIFQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILD 119
           D   I + +  +  +L +EE YWK RSR DWLK GD+NTK+FH+KAS RRRKN+I  + D
Sbjct: 407 DGEEIRKLEDQISNMLVDEEVYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVED 466

Query: 120 EHGSWVEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKS 179
           + G+WV++ + I      +F+ LF++SNP    + + +   L  V +  N  L +PFT  
Sbjct: 467 DQGNWVDDPEGIEGEFCGFFQQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPE 526

Query: 180 EVEGALKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIAL 239
           ++  AL  M PTKAPG DG+ A FFQ++W IV E  ++ CL ILN++ ++   N   IAL
Sbjct: 527 DITRALSEMCPTKAPGPDGLPAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIAL 586

Query: 240 ISKLKSPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
           I K++ PR + EFRP SLCNV+Y+IVAKA+ANR+K IL
Sbjct: 587 IPKVEKPRKVMEFRPISLCNVVYRIVAKAIANRLKPIL 624

BLAST of Lcy12g007850 vs. NCBI nr
Match: XP_042958141.1 (uncharacterized protein LOC122293703 [Carya illinoinensis])

HSP 1 Score: 198.4 bits (503), Expect = 9.1e-47
Identity = 115/273 (42.12%), Postives = 160/273 (58.61%), Query Frame = 0

Query: 5   EKEEGNPKCQRGMENFRNMINKCNLFDPSFSGSKFTWRKSKNDPSSVKERNDPKGDNPSI 64
           EK+  + +    +E FR  I +C L+D    G  FTW  ++      KER D    N   
Sbjct: 34  EKQGASSRPYNQIEAFRQAIERCGLYDVHHLGQHFTWSNNRRGTEFTKERIDKAMAN--- 93

Query: 65  FQAKKDLECLLDEEERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSW 124
              K+  E   D E+  W+ R+++ WLK GDRNT +FH +AS+RRR N ++ I D+ G  
Sbjct: 94  ---KEWKELFRDAEDVKWRQRAKQHWLKLGDRNTHFFHQQASQRRRTNTVRSIEDQQGRV 153

Query: 125 VEENKTIGLIATNYFKNLFSTSNPKGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGA 184
           V     IG + T YF  LFSTS P G   E +     KL  + ++  LSKPFT+ EV GA
Sbjct: 154 VANQAGIGEVFTGYFSTLFSTSCPTGFD-ECLHAMESKLTVDMKS-WLSKPFTREEVRGA 213

Query: 185 LKNMNPTKAPGKDGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLK 244
           +  MNP  + G DG+ A F+Q++W++V EE     L++LN  +S+   N   I+LI K+K
Sbjct: 214 VFQMNPLGSSGPDGLPAHFYQKHWEVVGEEVYSYALEVLNCSRSLQDVNDTYISLIPKVK 273

Query: 245 SPRSMAEFRPTSLCNVIYKIVAKALANRMKQIL 278
           +P+ +AEFRP S CNV+YKIV+K LANRMK IL
Sbjct: 274 NPKKLAEFRPISPCNVLYKIVSKTLANRMKGIL 298

BLAST of Lcy12g007850 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 8.2e-14
Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = 0

Query: 79  ERYWKIRSREDWLKWGDRNTKWFHNKASERRRKNEIKRILDEHGSWVEENKTIGLIATNY 138
           E +++ +SR  WL+ GD NT++FH      + KN IK +  +    VE    +  +   Y
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491

Query: 139 FKNLFSTSNP--KGRSMEKIMDSTLKLVYEAQNRRLSKPFTKSEVEGALKNMNPTKAPGK 198
           + +L  + +      S+++I D       +    RLS   +  E+  A+  M   KAPG 
Sbjct: 492 YTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGP 551

Query: 199 DGMHALFFQQYWDIVDEETSRICLDILNDKKSVMPFNKMLIALISKLKSPRSMAEFRPTS 258
           D   A FF + W +V + T     +       +  FN   I LI K+     ++ FRP S
Sbjct: 552 DSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVS 611

Query: 259 LCNVIYKIV 266
            C V+YKI+
Sbjct: 612 CCTVVYKII 620

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143812.0e-1728.77Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
O003701.2e-1229.00LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P113691.1e-1026.48LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
Match NameE-valueIdentityDescription
A0A2N9IMR21.9e-5042.39Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A803PRV51.8e-4843.28Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q8X42.3e-4849.28Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PUH44.0e-4844.35Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9GPZ71.5e-4740.42Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_006487889.11.5e-4938.14uncharacterized protein LOC102617714 [Citrus sinensis][more]
XP_023881891.19.7e-4946.22uncharacterized protein LOC111994244 [Quercus suber][more]
XP_030940247.11.3e-4837.92uncharacterized protein LOC115965211 [Quercus lobata][more]
XP_006491472.11.4e-4746.79uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_042958141.19.1e-4742.12uncharacterized protein LOC122293703 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
AT1G43760.18.2e-1428.57DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..63
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 71..277
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 71..277

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g007850.1Lcy12g007850.1mRNA