Lcy12g007040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g007040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	extensin-3-like
Location	Chr12: 30307023 .. 30312296 (-)
RNA-Seq Expression	Lcy12g007040
Synteny	Lcy12g007040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAACAGAGAAAAAGCGGAAAACAGCAACAAATCTCCTCGGCGGCGGCTGAAATCAACCACAACCCAAGAAGCACAAATCTCCCCTCTTTGCGAGCACCGACGGCGAGAAAACAACCACCCCCACGACCACGACGGTGGCGGAACTGGGAGTCAAAGACGGCGGCAGAAAAACCGAGAGTCGAAGACGACGGCGGCGGAACCAGGAGTCGAAGATGGCGGCAGCGGAACCGGGAGTCGAAGATGGCAGAGGCGGAACCGGGAGTCGAAGACGGCGGCGGCAAGCGGAGTCGAAGACGGCGGTGCGAAACGGATGGACGTGGGTGAATGCGTGGGGAGGCTCACGAAGGGGGGAGAAATGAGAATGAAATTTGTTTATGAAATTAGGGCTTTAATTGAACGGAACTCCCGACGCTACAAATCCTGCGTCGGCATCTACACTAACTCCCGATGCCGTAATAAAGAGCGTCGGGAGAGACCTTAAAATTAAAAAGAAAATTACTTTTTCGACCCCGACGCTTTTTATTTGACGTCGGCAGTTATCCCAACTCCCGACGGTGTTCAAATTAGCGTCGGGAGTTAATGCGAATACCAACGCTCCTTCAACTTGTTGCTAGAGCTCCCGACAGCCAAGTTTTACGTCGGGAAATATTATATATGCCGACGCGTTTTTTGACCGTCGGGATGAATTTCGTCGGGAGAACTAAATTTGTTGTAGTGTAAACTTGTAATTTAACCTAATCGATATTAGGTATTTAAATATTGTGTTATGGGCAAAATTAGCCATTTGTATTTTATGCAGGATAGGCCCAAATTAGTCGGGCCCGAAGACGACAGAAGCCAAGCCGACGAAACAATGGGCCGGAGCTTCTTCCGGCCCAAATACATAACCCTCGGCCTCGGCCCAAGGGAGAGGTCGAGGATGAGGTCTGCCTTGGCCCATTGCCGAGGCCGACCAGGGCCAAAGGCCTGGTGACCACTTGGAGTCCGGCAGCAGCGAAAACCCTAAGGGGAGTCTACAAAAAGGAAGACCACACACACAGTCAGGTATGCAAAAATCAATCCCGAAACATACTCTACGTGTTTTCCGGCCAAAGCTAACTTAAGCATCGGAGTGTGTGTGGTTTACACCACACCGGTGTGCAGCGTTTGTTCGTCTCGCAGGTCACGTCTTTCCCGCTCATTTACAAATTCACTGTTGATCGTCACGTAGAGCGGATGGCAAATTCCTAAGCGAAATTTGACCATCAACATATTGTATCAATGCTTCTAAAGTTGCATTTATATGAACTTGTGCCCCCCTGGTATAAAATCCTGGATCCGCCACTGATTGTGGAGATTTGTGTCATGTCTTTGTCCCTTACAACAAGTGGTATCAGAGAAATGTCCCGGGCGTAGCCGTGTCGGGTAGAATCCTCGGATGCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGTTGAGCTCTGGGCAGGCGGGTATACTCTAGAGAAGAGGAGTCGTCCTGGATAAGAGCAAGAACTCTCGGTAAAGCGGTAAAGCCTAGAGAGTTGGACAGATAGATGACTATTTGAGGGAAGGCTCGGTGGTACTTTGTTCAAGGGGATAATTGTTGGGAGTGCGACCAAAGTCCCACATTGACTAGATAAGGGAGAGATCATTGGTATATAAAGGAGGACAAATATCTCCATTGGTATGAGGTCTTTTGGGGTGGATCCAAAAGCAAAGTAGAAGGCCCTTACAATCTCCTTCACAAATAAAGAGATATATTCTTCATGGTAGATGGTTCCAAAATGGGTCCTCCATTCACAACGACAACAACGAACAATAGTGATGGTGGCGACGTTCACAAATGAAGAACAAAGAGGAAGAAGAATAGAAAATAGGAGGGAAAACATCTCGTTAACAAAAGAATAATATTTTTACCACATATCAATAAAGTACAGTTAGTAAACTAACCGTCACATCAACTTTTGCCACTCATATCTAACGGTAAAATGAACTCAAAAACCATTTACAACAATTTTTCAAATTTATTAAAAATGTCGAATTTGAAACCTCGCAAACTAAATAGACAACGGATCAAAAAATGTGTACTTTACCCTTAATTTTACGGATTTTTTTTTAATAAAATTGATATATATGAAAAAAAAAAAAAAAAAACACATGTTGAGCAAGAAAAACACACGAGAAAAAAATCAATTAAACACGGGTTCTAAGTTGAACCAACCAAAGGAAGAGACCAATGTTTTTATTTTATTTCATTTTTTAAAATAGATAAAAAATTTCTTTGCTAGACTTTAAGAAACACAAAATAATAATAAGGCTAAATTATAAAAAATACCCCTGAATTATGGGGTTGTTTCAAAAATGCTCCTAAACTTTAAAAAGTTTCAAAAATACTCCTGGATTTTACAAAACGTTTCAAAAATACCCTTGCAGTTAATTTTTGGATGGGAACTGTTAAAACCGTTTAAAATGTTTCGAAAATACCATTGCCAAAAATCTAGTCAAGCTCTTGGGATGATGTGTTGAAAGAGAAGAAAAGCTCATAGTGTATGAATACATGAAAAATAGGTAAAGTTTTTTCATTAATTTTCATGGAAGAAAAATTTACGGTAGGATAAGGAAAAAAAAAAAGAAGCATTTTCTAATAAGGTTATTTTTTAAAATCTTTTGAAAGTTAGAGAGTATTTAATGAAACTGAAGTTTTTAATGGTTTCCATAAAAAAATTAACGACAATGGTATTTTTGAAACATTTTTTAAAGTTCAGGGGTATCTTTGAAACTTTTTAAAGTTTAAGGACATTTTTGAAACAAACCCCATAGTTGAGGGACATTTTTTATAATTTAGCCTAATAATAATTAGGGTAAAATACATTTTTGGTCATGAGGTTTGGATTAGGTTTCAGTTTGGTCTCTAAGTTTTCAAATCCGATAATTTAGTCCTGTGGTTTGGATTTCTTTTCATTTTGTTTCACCATCCAATTTTCCGTTAATAATTAATGGATTGTGGGTAAAAATGTGACACTAGTTTTTTATTAAAAAAATTCTTTTTTAATTTTTAAAATATAAATATATTAAAATAATAAAAATATTTTTTATTTCTTTCATAATTTTGATTTTTGTATCTGACTAAATTTTTAATTCTTTTTTCTTTTATTTTTTATATTATATTTAAAATGTACACTTTTATTAATATTATGATGTTTAATTTATTTTTCAAAATAAATTAATTGGAAGCAGTACTATTATTTATCAAGTCAATTATATAAATGACGGATTTTTTTTTTTTTTTTTTGGACAATATCAATGATGGATTTAATACTCCAAAAACATCATATTTTTATTGAATTATGAATTATGTACTTGTTGATCAAAATTTTTATCTATAAATTACTAAGTTCATATATTTATTTTACGGCCTTCATTATTAATGCATATATTTGACTTTTAATTATTGATACTTTTTTTTTTTTTGATAACGATACATTTGCTTATAATAGTAGTTTATGACTTGAAAAAACTTGTTCTAAAGTTTCACAAAAGAATTCAAAATATTTTTACATGTTTAATTTTCATGGTATTTATGATTTTTTTGATATATCTGTAAATATGAGTTATTGATATCAATATCAGTATCGGTATCGATATTTTTTTCTTTGGTTATCATCACACGTTCAAATTTTTTTTTGATCAATTATGTCACACACTACTACGTTTATATAATTTTACGATTAATCTCTTAAATATCGTAAAATTTGATAGTATGATTGTAACGATTCATATGTAGTGGAGGGGTGGGGTTTAAAACATTTTCTTAAACTTTTTCAAAACGAGTTTCAAAATTTTCTTTTTACATATGTAAAAACAGACAAGTTTCGAACTCTTTATTTCCACAAGGTTCTAAGGGAAAATTCAACTTACAAATTTGCCTCTATTATTGTCTATGTTAATTAATGCTTTATTTTCAAATTCCACGTTTAGTTAGGTAATATTAATCTTTTGAATTAATTTACAATTCAATTTTTTTTTAAAGGAATTAATTTACAACTTTCAACTTGATTACCCGTTTGAGGAATAATGAAGGAACTCGAAGCTAATAGCTATATAAAGGCTGGGAAAGGTTCAATTCAAAATCAGAATTAAGGAGAAAACCCAATTCATAAGAAAAAATAATAATGGGTTCTTCTTCTTTAATGGCGTTCCTTGTTATGGCAGTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCCCCACCTGTTAGTTATTCTCCTTCACCACCAGTTTACTACTATCCTCCACCACCTCGTAAGAATGACGATGAGTACAAGTCTCCTCCACCGCCACCGAAGAAGAATGAAGGCAAGTCGCCGCCGCCGCCACCACCAAAAAAGAACGAAGACAAGTCACCGCCTCCTCCACCACCAAAGAAGAATGAAGGCAAGTCGCCTCCACTGCCGCCACCAAAGAAGAACGAAGGCAAGTCGCCGCCGCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCACCCCCACCAAAAAAGAACGAAGGCAAGTCACCTCCGCCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCCCCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCGCCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTATGAGTACAAGTCTCCTCCTCCTCCGCCATCTCCTTACTAATATGTTAGGGTCAATAGATCCTCATCTACTATATAAACTAAAATAAGGTATAAGGTGAGCTTCTTATCAAGAGATACATATTACTCACTTCATTACTCAAACATATGCATATATCTCAACATGCAATATCTTACTTAAGTTAAATGTTGCTTTGCAGGAATAAATAGCCAAAGAAATATGTATTCAGATCAATAAAAGGAGACGACCAAGTGATAAAGACCATATTTTTCTATCTTAAAGAGGGTTGTTTCATCTGCTTGCTTCTCTGGTTTTTAGCTGTTTCAATGAGTGGTTTTCATTTAGTGTGCCACTGATCAATAAATAAAATTAAAACTTTCGTGTTTCATCACATAAAAGCTTCAAATATTCGTATTGTAAGACCCACGAAGAATGTAATATATCAATAAAACGTATGTTATGTTAAGTAATA

mRNA sequence

ATGAACAAACAGAGAAAAAGCGGAAAACAGCAACAAATCTCCTCGGCGGCGGCTGAAATCAACCACAACCCAAGAAGCACAAATCTCCCCTCTTTGCGAGCACCGACGGCGAGAAAACAACCACCCCCACGACCACGACGGTGGCGGAACTGGGAGTCAAAGACGGCGGCAGAAAAACCGAGAGTCGAAGACGACGGCGGCGGAACCAGGAGTCGAAGATGGCGGCAGCGGAACCGGGAGTCGAAGATGGCAGAGGCGGAACCGGGAGTCGAAGACGGCGGCGGCAAGCGGAGTCGAAGACGGCGGTGCGAAACGGATGGACTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCCCCACCTGTTAGTTATTCTCCTTCACCACCAGTTTACTACTATCCTCCACCACCTCGTAAGAATGACGATGAGTACAAGTCTCCTCCACCGCCACCGAAGAAGAATGAAGGCAAGTCGCCGCCGCCGCCACCACCAAAAAAGAACGAAGACAAGTCACCGCCTCCTCCACCACCAAAGAAGAATGAAGGCAAGTCGCCTCCACTGCCGCCACCAAAGAAGAACGAAGGCAAGTCGCCGCCGCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCACCCCCACCAAAAAAGAACGAAGGCAAGTCACCTCCGCCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCCCCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCGCCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTATGAGTACAAGTCTCCTCCTCCTCCGCCATCTCCTTACTAATATGTTAGGGTCAATAGATCCTCATCTACTATATAAACTAAAATAAGGTATAAGGTGAGCTTCTTATCAAGAGATACATATTACTCACTTCATTACTCAAACATATGCATATATCTCAACATGCAATATCTTACTTAAGTTAAATGTTGCTTTGCAGGAATAAATAGCCAAAGAAATATGTATTCAGATCAATAAAAGGAGACGACCAAGTGATAAAGACCATATTTTTCTATCTTAAAGAGGGTTGTTTCATCTGCTTGCTTCTCTGGTTTTTAGCTGTTTCAATGAGTGGTTTTCATTTAGTGTGCCACTGATCAATAAATAAAATTAAAACTTTCGTGTTTCATCACATAAAAGCTTCAAATATTCGTATTGTAAGACCCACGAAGAATGTAATATATCAATAAAACGTATGTTATGTTAAGTAATA

Coding sequence (CDS)

ATGAACAAACAGAGAAAAAGCGGAAAACAGCAACAAATCTCCTCGGCGGCGGCTGAAATCAACCACAACCCAAGAAGCACAAATCTCCCCTCTTTGCGAGCACCGACGGCGAGAAAACAACCACCCCCACGACCACGACGGTGGCGGAACTGGGAGTCAAAGACGGCGGCAGAAAAACCGAGAGTCGAAGACGACGGCGGCGGAACCAGGAGTCGAAGATGGCGGCAGCGGAACCGGGAGTCGAAGATGGCAGAGGCGGAACCGGGAGTCGAAGACGGCGGCGGCAAGCGGAGTCGAAGACGGCGGTGCGAAACGGATGGACTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCCCCACCTGTTAGTTATTCTCCTTCACCACCAGTTTACTACTATCCTCCACCACCTCGTAAGAATGACGATGAGTACAAGTCTCCTCCACCGCCACCGAAGAAGAATGAAGGCAAGTCGCCGCCGCCGCCACCACCAAAAAAGAACGAAGACAAGTCACCGCCTCCTCCACCACCAAAGAAGAATGAAGGCAAGTCGCCTCCACTGCCGCCACCAAAGAAGAACGAAGGCAAGTCGCCGCCGCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCACCCCCACCAAAAAAGAACGAAGGCAAGTCACCTCCGCCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCCCCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCGCCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTATGAGTACAAGTCTCCTCCTCCTCCGCCATCTCCTTACTAA

Protein sequence

MNKQRKSGKQQQISSAAAEINHNPRSTNLPSLRAPTARKQPPPRPRRWRNWESKTAAEKPRVEDDGGGTRSRRWRQRNRESKMAEAEPGVEDGGGKRSRRRRCETDGLLVASLSLPSATGQGYDSSPPPPPVSYSPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNEEKSPPPPPPKKNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPKKYPPPSDYEYKSPPPPPSPY

Homology

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BLAST of Lcy12g007040 vs. ExPASy Swiss-Prot
Match: Q9FLQ7 (Formin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=FH20 PE=2 SV=3)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04
Identity = 96/203 (47.29%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 116  PSATGQGYDSSPPPPPVSY-SPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPP 175
            P   G G    PPPPP SY SP PP    PPPP  +      PPPPP  + G  PPPPPP
Sbjct: 1008 PPPPGYGSPPPPPPPPPSYGSPPPP----PPPPFSHVSSIPPPPPPPPMHGGAPPPPPPP 1067

Query: 176  KKNEDKSPPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNEEKSPPPPPPKKNEGKSPP 235
              +    PPPPPP  + G  PP PPP  + G  PPPPP       PPPPPP +  G +PP
Sbjct: 1068 PMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPMFGGAQPPPPPPMR--GGAPP 1127

Query: 236  PPPKKKEDKSPPPPPSPKKS---PPPPPPRKSLRPPPPPKK----SPPPPPPK--KSPPP 295
            PPP      +PPPPP P +    PPPPPP     PPPPP      +PPPPPP   + P  
Sbjct: 1128 PPPPPMRGGAPPPPPPPMRGGAPPPPPPPMHGGAPPPPPPPMRGGAPPPPPPPGGRGPGA 1187

Query: 296  PPPKKYPPPSDYEYKSPPPPPSP 309
            PPP   PPP       PPPPP P
Sbjct: 1188 PPP---PPPPGGRAPGPPPPPGP 1201

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BLAST of Lcy12g007040 vs. ExPASy TrEMBL
Match: A0A6J1IP49 (extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-22
Identity = 124/197 (62.94%), Postives = 134/197 (68.02%), Query Frame = 0


Query: 128 PPPPVSYSPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPPKKN------EDKS 187
           PPPPV YS  PP  YY PPP K DDEYKSPPPP  K   KSPPPPPP+K         KS
Sbjct: 492 PPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVK---KSPPPPPPRKKPPPPPAPKKS 551

Query: 188 PPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNE------EKSPPPPPPKKNE------ 247
           PPPPPP+K   KSPP P PKK+    PPPPP+K        +KSPPPPPP+K        
Sbjct: 552 PPPPPPRK---KSPPPPAPKKS---PPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAP 611

Query: 248 GKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPK 307
            KSPPPPP +K+    PPPP+PKKSPPPPPPRK   PPPPPKKSPPPP PKKSPPPPPP+
Sbjct: 612 KKSPPPPPPRKKS---PPPPAPKKSPPPPPPRKKSPPPPPPKKSPPPPSPKKSPPPPPPR 671

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BLAST of Lcy12g007040 vs. ExPASy TrEMBL
Match: A0A5N5I4V5 (Extensin-3-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025769 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.8e-18
Identity = 137/222 (61.71%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 116 PSATGQGYDS-SPPPPPVSYSPSPP--VYYY--PPPPRKNDDEYKSPPPPPKK-NEGKSP 175
           PS     Y S  PPPPP+ +SP PP   Y+Y  PPPP K    YKSPPPP KK    KSP
Sbjct: 75  PSPKPYHYKSPPPPPPPLVHSPPPPKEPYHYKSPPPPPKKPYHYKSPPPPRKKPYHYKSP 134

Query: 176 PPPPPKK-NEDKSPPPPPPKK-NEGKSPPLPPPKK--NEGKSPPPPPKK-NEEKSPPPPP 235
           PPPPPKK +  KSPPPPPPKK N  KSPP PPPKK  +   SPPPPPKK    KSPPPPP
Sbjct: 135 PPPPPKKPHHHKSPPPPPPKKPNHYKSPPPPPPKKPHHHKSSPPPPPKKPYHYKSPPPPP 194

Query: 236 PKK-NEGKSPPPPPKKK-EDKSPPPPPSPK----KSPPPPPPRKSLR----PPPPPK--- 295
           PKK +  KSPPPPPKK    KSPPPPP  K    KSPPPPPP+K       PPPPPK   
Sbjct: 195 PKKPHHHKSPPPPPKKPYHYKSPPPPPPKKPHHHKSPPPPPPKKPYHYKSPPPPPPKKPH 254

Query: 296 --KSPPPPPPK-----KSPPPPPPKKYPPPSDYEYKSPPPPP 307
             KSPPPPPPK     KSPPPPPPKK      Y YKSPPPPP
Sbjct: 255 HHKSPPPPPPKKPYHYKSPPPPPPKK-----PYHYKSPPPPP 291

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BLAST of Lcy12g007040 vs. ExPASy TrEMBL
Match: A0A4V3WQ10 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_022275 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-16
Identity = 136/239 (56.90%), Postives = 146/239 (61.09%), Query Frame = 0


Query: 95  GKRSRRRRCETDGLL-VASLSLPSATGQGYD-SSPPPPPVSYSPSPPVYYY-----PPP- 154
           G+RS      T  LL V SLSLP  T   Y+ SSPPPP  S  P PP YYY     PPP 
Sbjct: 7   GRRSAMASLITTVLLAVVSLSLPLETTANYNYSSPPPPKKSPPPPPPPYYYKSPPPPPPV 66

Query: 155 ---PRKNDDEYKSPPPPPKKNEGKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPLPPPKKN 214
              P  +  +YKSPPPPP   + KSPPPPPP   + KSPPPPPPKK    S P PPP K 
Sbjct: 67  HYSPPSHPYKYKSPPPPPPVYKYKSPPPPPPPVYKYKSPPPPPPKKPYKYSSPPPPPYKY 126

Query: 215 EGKSPPPPPKKNEEKSPPPPPPKK-NEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPP--P 274
             KSPPPPP   + KSPPPPPPKK  +  SPPPPP K +   PPPP    KSPPPPP  P
Sbjct: 127 --KSPPPPPPVYKYKSPPPPPPKKPYKYSSPPPPPYKYKSPPPPPPVYKYKSPPPPPKEP 186

Query: 275 RKSLRPPPPP--KKSPPPPPP---KKSPPPPPPKK-----YPPPSDYEYKSPPPPPSPY 310
            K   PPPPP   KSPPPPPP    KSPPPPPPKK      PPP  Y+YKSPPPPP  Y
Sbjct: 187 YKYSSPPPPPYKYKSPPPPPPVYKYKSPPPPPPKKPYKYSSPPPPPYKYKSPPPPPPVY 243

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BLAST of Lcy12g007040 vs. ExPASy TrEMBL
Match: A0A251U7B1 (Putative extensin 3 OS=Helianthus annuus OX=4232 GN=ATEXT3 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-14
Identity = 128/218 (58.72%), Postives = 136/218 (62.39%), Query Frame = 0


Query: 123 YDSSPPPPPVSYSPSPPVYYY-----PPPPRKNDDEYKSPPPPPKKNEGKSPPPPPPKKN 182
           Y S PPPPP    P PP ++Y     PPPP K    YKSPPPPPK    KSPPPPP    
Sbjct: 193 YKSPPPPPPKKSPPPPPKHHYVYKSPPPPPPKEHYVYKSPPPPPK----KSPPPPPKHHY 252

Query: 183 EDKSPPPPPPKKN-EGKSPPLPPPKKNEGKSPPPPPKKN-EEKSPPPPPPKKN-EGKSPP 242
             KSPPPPPPK++   KSPP PPPK    KSPPPPPK +   KSPPPPPPK++   KSPP
Sbjct: 253 VYKSPPPPPPKEHYVYKSPPPPPPK----KSPPPPPKHHYVYKSPPPPPPKEHYVYKSPP 312

Query: 243 PPPKKKEDKSPP--------PPPSPK-----KSPPPPPPRKSLRPPPPPK-----KSPPP 302
           PPP KK    PP        PPP PK     KSPPPPPP+KS   PPPPK     KSPPP
Sbjct: 313 PPPPKKSPPPPPKHHYVYKSPPPPPKEHYVYKSPPPPPPKKS---PPPPKHHYVYKSPPP 372

Query: 303 PPPK-----KSPPPPPPKKYPPP---SDYEYKSPPPPP 307
           PPPK     KSPPPPPPKK PPP     Y YKSPPPPP
Sbjct: 373 PPPKEHYVYKSPPPPPPKKSPPPPPKHHYVYKSPPPPP 399

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BLAST of Lcy12g007040 vs. ExPASy TrEMBL
Match: A0A5J5B5J7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027540 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 125/222 (56.31%), Postives = 140/222 (63.06%), Query Frame = 0


Query: 108 LLVASLSLPSAT--GQGYDSSPPPPPVSYSPSPPVYYY----PPPPRKNDDE-----YKS 167
           +++ SLSLPS T     Y S PPPPP  Y P PP +YY    PPPP  +        YKS
Sbjct: 19  MVIVSLSLPSKTTAKYPYSSPPPPPPKKYPPPPPPHYYYKSPPPPPPVHSPPPPPPVYKS 78

Query: 168 PPPPPKKNEGKSPPPPPPKK--NEDKSPPPPPPKKNEGKSPPLPPPKK-NEGKSPPPPPK 227
           PPPPP  +  KSPPPPPPK+   + KSPPPPPP     KSPP PPPK+  + KSPPPPP 
Sbjct: 79  PPPPPPVH--KSPPPPPPKEPPYKYKSPPPPPPVH---KSPPPPPPKEPYKYKSPPPPPP 138

Query: 228 KNEEKSPPPPPPKK-NEGKSPPPPPKKKEDKSPPPPPSP--KKSPPPPPPRKSLRPPPPP 287
            +  KSPPPPPPK+  + KSPPPPP   +   PPPP  P   KSPPPPPP     PPPPP
Sbjct: 139 VH--KSPPPPPPKEPYKYKSPPPPPPVHKSPPPPPPKEPYKYKSPPPPPPVHKSPPPPPP 198

Query: 288 K-----KSPPPPPP-KKSPPPPPPKKYPPPSDYEYKSPPPPP 307
           K     KSPPPPPP  KSPPPPPPKK      Y+Y SPPPPP
Sbjct: 199 KEPYKYKSPPPPPPVHKSPPPPPPKK-----PYKYTSPPPPP 228

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BLAST of Lcy12g007040 vs. NCBI nr
Match: XP_022976649.1 (extensin-3-like [Cucurbita maxima])

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-22
Identity = 124/197 (62.94%), Postives = 134/197 (68.02%), Query Frame = 0


Query: 128 PPPPVSYSPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPPKKN------EDKS 187
           PPPPV YS  PP  YY PPP K DDEYKSPPPP  K   KSPPPPPP+K         KS
Sbjct: 492 PPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVK---KSPPPPPPRKKPPPPPAPKKS 551

Query: 188 PPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNE------EKSPPPPPPKKNE------ 247
           PPPPPP+K   KSPP P PKK+    PPPPP+K        +KSPPPPPP+K        
Sbjct: 552 PPPPPPRK---KSPPPPAPKKS---PPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAP 611

Query: 248 GKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPK 307
            KSPPPPP +K+    PPPP+PKKSPPPPPPRK   PPPPPKKSPPPP PKKSPPPPPP+
Sbjct: 612 KKSPPPPPPRKKS---PPPPAPKKSPPPPPPRKKSPPPPPPKKSPPPPSPKKSPPPPPPR 671

[Close]

BLAST of Lcy12g007040 vs. NCBI nr
Match: XP_022039692.1 (extensin-3-like [Helianthus annuus] >KAF5807649.1 hypothetical protein HanXRQr2_Chr05g0235981 [Helianthus annuus])

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-18
Identity = 144/249 (57.83%), Postives = 156/249 (62.65%), Query Frame = 0


Query: 108 LLVASLSLPSATGQGYDSSPPPPPVSYS--------------PSPPVYYYPPPPRKNDDE 167
           +++ SLS PS T   Y  S PPPP   S              P PPVY  PPPP K   +
Sbjct: 21  VVIVSLSFPSLTTANYPYSSPPPPTKKSPPPPTPHYLYKSPPPPPPVYKSPPPPPKKPYK 80

Query: 168 YKSPPPPPKKNE-GKSPPPPPPKKN-EDKSPPPPPPKKN-EGKSPPLPPPKKN-EGKSPP 227
           YKSPPPPPK +   KSPPPPPPKK+ E KSPPPP PKK+ E KSPP PPPKK+   KSPP
Sbjct: 81  YKSPPPPPKTHYIYKSPPPPPPKKHYEYKSPPPPLPKKHYEYKSPPPPPPKKHYYYKSPP 140

Query: 228 PPPKKN--EEKSPPPPPPKKN-EGKSPPPPPKKK--EDKSPPPPPSPK-----KSPPPPP 287
           PPP K   E KSPPPPPPK + + KSPPPPP KK  E KSPPPPP PK     KSPPPPP
Sbjct: 141 PPPPKKHYEYKSPPPPPPKTHYKYKSPPPPPPKKHYEYKSPPPPP-PKTHYKYKSPPPPP 200

Query: 288 PR----KSLRPPPPPK----KSPPPPPPK-----KSPPPPPPKKY---------PPPSDY 307
            +    KS  PPPP K    KSPPPPPPK     KSPPPPPPKK+         PP   Y
Sbjct: 201 KKHYEYKSPPPPPPKKHYEYKSPPPPPPKTHYKYKSPPPPPPKKHYEYKSPPPPPPKKHY 260

[Close]

BLAST of Lcy12g007040 vs. NCBI nr
Match: KAB2635235.1 (extensin-3-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-17
Identity = 137/222 (61.71%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 116 PSATGQGYDS-SPPPPPVSYSPSPP--VYYY--PPPPRKNDDEYKSPPPPPKK-NEGKSP 175
           PS     Y S  PPPPP+ +SP PP   Y+Y  PPPP K    YKSPPPP KK    KSP
Sbjct: 75  PSPKPYHYKSPPPPPPPLVHSPPPPKEPYHYKSPPPPPKKPYHYKSPPPPRKKPYHYKSP 134

Query: 176 PPPPPKK-NEDKSPPPPPPKK-NEGKSPPLPPPKK--NEGKSPPPPPKK-NEEKSPPPPP 235
           PPPPPKK +  KSPPPPPPKK N  KSPP PPPKK  +   SPPPPPKK    KSPPPPP
Sbjct: 135 PPPPPKKPHHHKSPPPPPPKKPNHYKSPPPPPPKKPHHHKSSPPPPPKKPYHYKSPPPPP 194

Query: 236 PKK-NEGKSPPPPPKKK-EDKSPPPPPSPK----KSPPPPPPRKSLR----PPPPPK--- 295
           PKK +  KSPPPPPKK    KSPPPPP  K    KSPPPPPP+K       PPPPPK   
Sbjct: 195 PKKPHHHKSPPPPPKKPYHYKSPPPPPPKKPHHHKSPPPPPPKKPYHYKSPPPPPPKKPH 254

Query: 296 --KSPPPPPPK-----KSPPPPPPKKYPPPSDYEYKSPPPPP 307
             KSPPPPPPK     KSPPPPPPKK      Y YKSPPPPP
Sbjct: 255 HHKSPPPPPPKKPYHYKSPPPPPPKK-----PYHYKSPPPPP 291

[Close]

BLAST of Lcy12g007040 vs. NCBI nr
Match: KAG6592193.1 (hypothetical protein SDJN03_14539, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-17
Identity = 124/203 (61.08%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 108 LLVASLSLPSATGQGYDS-SPPPPPVSYSPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEG 167
           + V +LSL S + +GYD    PPPPV YSP PPV Y  PP       Y SPPPP K +E 
Sbjct: 14  VFVVALSLSSTSAEGYDDYYSPPPPVYYSPPPPVKYSSPP-----RVYYSPPPPKKDDED 73

Query: 168 KSPPPPPPKKNEDKSPPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNEEKSPPPPPPK 227
           KSPPPPPPK    K+PPPP  K    KSPP PPP+K   KSPPPP  K   KSPPPPPP+
Sbjct: 74  KSPPPPPPK----KTPPPPEVK----KSPPPPPPRK---KSPPPPAPK---KSPPPPPPR 133

Query: 228 KNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPP 287
           K   KSPPPP      KSPPPPP PKKSPPPPP +KS  PPPPPKKSPP P PKKSPPPP
Sbjct: 134 K---KSPPPP-----KKSPPPPPPPKKSPPPPPQKKS--PPPPPKKSPPQPEPKKSPPPP 178

Query: 288 PPKKYPPPSDYEYKSPPPPPSPY 310
            P         EYK PPPPPSPY
Sbjct: 194 SP---------EYKWPPPPPSPY 178

[Close]

BLAST of Lcy12g007040 vs. NCBI nr
Match: BBN11654.1 (hypothetical protein Mp_5g13720 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-16
Identity = 127/193 (65.80%), Postives = 135/193 (69.95%), Query Frame = 0


Query: 124 DSSPPPPPVSYSPSPP--VYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPPKKNEDKS 183
           + SPPPPP   SP PP  V   PPPP K     KSPPPPP K+  KSPPPPPPK   DKS
Sbjct: 85  ERSPPPPPKDKSPPPPPQVKSPPPPPPKE----KSPPPPPPKD--KSPPPPPPK---DKS 144

Query: 184 PPPPPPKKN------EGKSPPLPPPKKNEGKSPPPPPKKNEEKSPPPPPPKKNEGKSPPP 243
           PPPPPPK+       + KSPP PPPK+   KSPPPPP K  EKSPPPPPPK    KSPPP
Sbjct: 145 PPPPPPKEKSPPPPPKEKSPPPPPPKE---KSPPPPPPK--EKSPPPPPPKV---KSPPP 204

Query: 244 PPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPK-KSPPPPPPK-KYPP 303
           PP K  DKSPPPPP  +KSPPPPP  KS  PPPP +KSPPPPPPK KSPPPPPPK K PP
Sbjct: 205 PPPK--DKSPPPPPPKEKSPPPPPKEKSPPPPPPKEKSPPPPPPKDKSPPPPPPKDKSPP 258

Query: 304 PSDYEYKSPPPPP 307
           P   + KSPPPPP
Sbjct: 265 PPPPKEKSPPPPP 258

[Close]

BLAST of Lcy12g007040 vs. TAIR 10
Match: AT5G07740.1 (actin binding )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 96/203 (47.29%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 116  PSATGQGYDSSPPPPPVSY-SPSPPVYYYPPPPRKNDDEYKSPPPPPKKNEGKSPPPPPP 175
            P   G G    PPPPP SY SP PP    PPPP  +      PPPPP  + G  PPPPPP
Sbjct: 1008 PPPPGYGSPPPPPPPPPSYGSPPPP----PPPPFSHVSSIPPPPPPPPMHGGAPPPPPPP 1067

Query: 176  KKNEDKSPPPPPPKKNEGKSPPLPPPKKNEGKSPPPPPKKNEEKSPPPPPPKKNEGKSPP 235
              +    PPPPPP  + G  PP PPP  + G  PPPPP       PPPPPP +  G +PP
Sbjct: 1068 PMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPMFGGAQPPPPPPMR--GGAPP 1127

Query: 236  PPPKKKEDKSPPPPPSPKKS---PPPPPPRKSLRPPPPPKK----SPPPPPPK--KSPPP 295
            PPP      +PPPPP P +    PPPPPP     PPPPP      +PPPPPP   + P  
Sbjct: 1128 PPPPPMRGGAPPPPPPPMRGGAPPPPPPPMHGGAPPPPPPPMRGGAPPPPPPPGGRGPGA 1187

Query: 296  PPPKKYPPPSDYEYKSPPPPPSP 309
            PPP   PPP       PPPPP P
Sbjct: 1188 PPP---PPPPGGRAPGPPPPPGP 1201

The following BLAST results are available for this feature:

BLAST of Lcy12g007040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLQ7	1.6e-04	47.29	Formin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=FH20 PE=2 SV=3	[more]

BLAST of Lcy12g007040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IP49	1.0e-22	62.94	extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1	[more]
A0A5N5I4V5	9.8e-18	61.71	Extensin-3-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025769...	[more]
A0A4V3WQ10	5.4e-16	56.90	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0222...	[more]
A0A251U7B1	1.3e-14	58.72	Putative extensin 3 OS=Helianthus annuus OX=4232 GN=ATEXT3 PE=4 SV=1	[more]
A0A5J5B5J7	1.5e-13	56.31	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027540 PE=4 SV=1	[more]

BLAST of Lcy12g007040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976649.1	2.1e-22	62.94	extensin-3-like [Cucurbita maxima]	[more]
XP_022039692.1	4.1e-18	57.83	extensin-3-like [Helianthus annuus] >KAF5807649.1 hypothetical protein HanXRQr2_...	[more]
KAB2635235.1	2.0e-17	61.71	extensin-3-like [Pyrus ussuriensis x Pyrus communis]	[more]
KAG6592193.1	4.5e-17	61.08	hypothetical protein SDJN03_14539, partial [Cucurbita argyrosperma subsp. sorori...	[more]
BBN11654.1	1.3e-16	65.80	hypothetical protein Mp_5g13720 [Marchantia polymorpha subsp. ruderalis]	[more]

BLAST of Lcy12g007040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07740.1	1.1e-05	47.29	actin binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 109..130 score: 31.82 coord: 132..148 score: 36.47 coord: 33..45 score: 36.92 coord: 175..200 score: 26.15 coord: 157..174 score: 35.56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g007040.1	Lcy12g007040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity