Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGAATTTGAACTCAAGATCAGCCCAACCAGAGCTGATGATCCTTCCTCAACCTTTGAGCTTCAGTTGGCCAAAGCCACTGCCACTCCCTTTTTCTGGTCTGATGAAACCCCTTCCATGTTCATTCTCACTGCCAAGCTCACAGGTCTATGAGTCTATCAATCAATCCATTTCTCTCTCATTCTGTTTCTGTTTGGTTTCTGTCTGTTCTCTCTCTCTAATTGTTTTGGGTTTTCTCTCATTGTCCTGTTGCAGGTTTTGCAAGAGACGACATCGTGATAACTATTAATGGAAGCGGTACTCGGATCGAGATCGGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGATGTACAAGAAAGAAACGGAGACGAGGAGGTTCAAGAAGATCTTTTGTATTCCCGACGGTGTGGTTTTGGATGAAATCAAGGCGACTTATAATGACGAAGAATCGATTTTGAAGATATTGATGCCCAAATTGGTGGATGGAATCCTTGGGGTAGGAATTGAAGAAGTAAGGGAACAGGAAGTTGGCGAAGCTGCATTTGAATCTCAGGATTACGATGCTGAGGAGATTCCTCATTCAACTGCAGAGCTTGAGACTCTGGAAACTGGCAAAAAGACCAGATTGGTTGAAGATGATAATCATGAAAATGAGGAAGACGATGCTGCTAATGGAGAATTTGGAGGAGAAAATGCAGAGCCCGAAGCATTTTCTAAGATAGAATATGTAGCAGAAACACCCCAAGAAGAGATCGAGAAGCTGAAGAGCGATGAGACGGAAGATATTGATGGCGTTTCCAATGACTACTCTGAAAGTGAACAGTTAGAAAACGTAGCAACAAAAACTACTGAGATTGAGGCAACCAGAGAAAATGTGAATGGAGAAATCAAGGTCCCCAAGGTTAGAAGTATGGAAGGAATAGAAGTGGCTGAAGAAACATCACAAGGAACAGCGCATAATGGCAATATAACCACCGTGATAAATAAGCAACCAGATGTCAAAACACAATCACAAGCTTCAATTGATCGAGAGGCACAAGTATTAGACCGAAAATTTTCGCAGCCAGATCGACAGACTCAAGCAGAACAGAGGAAGCAGGAAACATACAAAAACGTTCGGGAATTGGAAGAACTTGAAACCAATAAAGAACCTGAAGATACAGAAAGTCCATATTTGCAAAGCCCTGCACATGAGCATGAAGAGAAAGGAGTTGATCAACAAGGAAAAAAAATTGAAACAGAAGATGACAAAGCAAGAGAAGAATGCAAGTCACCACAGAAGGAGACACATGAAGATTCCAGCAAGGAGGCAAAACAAGAGAAAAAGCAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATTATTGCAGGGTCAGCACTTCTCGCATCCCTTGTAATAGTTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
mRNA sequence
ATGGGAATGGAATTTGAACTCAAGATCAGCCCAACCAGAGCTGATGATCCTTCCTCAACCTTTGAGCTTCAGTTGGCCAAAGCCACTGCCACTCCCTTTTTCTGGTCTGATGAAACCCCTTCCATGTTCATTCTCACTGCCAAGCTCACAGGTTTTGCAAGAGACGACATCGTGATAACTATTAATGGAAGCGGTACTCGGATCGAGATCGGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGATGTACAAGAAAGAAACGGAGACGAGGAGGTTCAAGAAGATCTTTTGTATTCCCGACGGTGTGGTTTTGGATGAAATCAAGGCGACTTATAATGACGAAGAATCGATTTTGAAGATATTGATGCCCAAATTGGTGGATGGAATCCTTGGGGTAGGAATTGAAGAAGTAAGGGAACAGGAAGTTGGCGAAGCTGCATTTGAATCTCAGGATTACGATGCTGAGGAGATTCCTCATTCAACTGCAGAGCTTGAGACTCTGGAAACTGGCAAAAAGACCAGATTGGTTGAAGATGATAATCATGAAAATGAGGAAGACGATGCTGCTAATGGAGAATTTGGAGGAGAAAATGCAGAGCCCGAAGCATTTTCTAAGATAGAATATGTAGCAGAAACACCCCAAGAAGAGATCGAGAAGCTGAAGAGCGATGAGACGGAAGATATTGATGGCGTTTCCAATGACTACTCTGAAAGTGAACAGTTAGAAAACGTAGCAACAAAAACTACTGAGATTGAGGCAACCAGAGAAAATGTGAATGGAGAAATCAAGGTCCCCAAGGTTAGAAGTATGGAAGGAATAGAAGTGGCTGAAGAAACATCACAAGGAACAGCGCATAATGGCAATATAACCACCGTGATAAATAAGCAACCAGATGTCAAAACACAATCACAAGCTTCAATTGATCGAGAGGCACAAGTATTAGACCGAAAATTTTCGCAGCCAGATCGACAGACTCAAGCAGAACAGAGGAAGCAGGAAACATACAAAAACGTTCGGGAATTGGAAGAACTTGAAACCAATAAAGAACCTGAAGATACAGAAAGTCCATATTTGCAAAGCCCTGCACATGAGCATGAAGAGAAAGGAGTTGATCAACAAGGAAAAAAAATTGAAACAGAAGATGACAAAGCAAGAGAAGAATGCAAGTCACCACAGAAGGAGACACATGAAGATTCCAGCAAGGAGGCAAAACAAGAGAAAAAGCAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATTATTGCAGGGTCAGCACTTCTCGCATCCCTTGTAATAGTTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
Coding sequence (CDS)
ATGGGAATGGAATTTGAACTCAAGATCAGCCCAACCAGAGCTGATGATCCTTCCTCAACCTTTGAGCTTCAGTTGGCCAAAGCCACTGCCACTCCCTTTTTCTGGTCTGATGAAACCCCTTCCATGTTCATTCTCACTGCCAAGCTCACAGGTTTTGCAAGAGACGACATCGTGATAACTATTAATGGAAGCGGTACTCGGATCGAGATCGGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGATGTACAAGAAAGAAACGGAGACGAGGAGGTTCAAGAAGATCTTTTGTATTCCCGACGGTGTGGTTTTGGATGAAATCAAGGCGACTTATAATGACGAAGAATCGATTTTGAAGATATTGATGCCCAAATTGGTGGATGGAATCCTTGGGGTAGGAATTGAAGAAGTAAGGGAACAGGAAGTTGGCGAAGCTGCATTTGAATCTCAGGATTACGATGCTGAGGAGATTCCTCATTCAACTGCAGAGCTTGAGACTCTGGAAACTGGCAAAAAGACCAGATTGGTTGAAGATGATAATCATGAAAATGAGGAAGACGATGCTGCTAATGGAGAATTTGGAGGAGAAAATGCAGAGCCCGAAGCATTTTCTAAGATAGAATATGTAGCAGAAACACCCCAAGAAGAGATCGAGAAGCTGAAGAGCGATGAGACGGAAGATATTGATGGCGTTTCCAATGACTACTCTGAAAGTGAACAGTTAGAAAACGTAGCAACAAAAACTACTGAGATTGAGGCAACCAGAGAAAATGTGAATGGAGAAATCAAGGTCCCCAAGGTTAGAAGTATGGAAGGAATAGAAGTGGCTGAAGAAACATCACAAGGAACAGCGCATAATGGCAATATAACCACCGTGATAAATAAGCAACCAGATGTCAAAACACAATCACAAGCTTCAATTGATCGAGAGGCACAAGTATTAGACCGAAAATTTTCGCAGCCAGATCGACAGACTCAAGCAGAACAGAGGAAGCAGGAAACATACAAAAACGTTCGGGAATTGGAAGAACTTGAAACCAATAAAGAACCTGAAGATACAGAAAGTCCATATTTGCAAAGCCCTGCACATGAGCATGAAGAGAAAGGAGTTGATCAACAAGGAAAAAAAATTGAAACAGAAGATGACAAAGCAAGAGAAGAATGCAAGTCACCACAGAAGGAGACACATGAAGATTCCAGCAAGGAGGCAAAACAAGAGAAAAAGCAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATTATTGCAGGGTCAGCACTTCTCGCATCCCTTGTAATAGTTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
Protein sequence
MGMEFELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGSGTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKILMPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNHENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQLENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTAHNGNITTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKEPEDTESPYLQSPAHEHEEKGVDQQGKKIETEDDKAREECKSPQKETHEDSSKEAKQEKKQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG
Homology
BLAST of Lcy12g006830 vs. ExPASy TrEMBL
Match:
A0A6J1CPW6 (uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013495 PE=3 SV=1)
HSP 1 Score: 521.5 bits (1342), Expect = 3.4e-144
Identity = 312/478 (65.27%), Postives = 365/478 (76.36%), Query Frame = 0
Query: 1 MGMEFELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVIT 60
MG++FELKISP+ + S FELQLA+ T +P FWS+ET SMFILTAKLTGF+R+DI IT
Sbjct: 34 MGLDFELKISPSSS---FSNFELQLARGTPSP-FWSNETNSMFILTAKLTGFSREDIGIT 93
Query: 61 INGSGTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESI 120
ING+GTRIEIGWGQPVQ+MEITRWMYKKETETRRFKKIF IPDGVVLDEIKATYNDEESI
Sbjct: 94 INGTGTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 153
Query: 121 LKILMPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVE 180
LKI+MPKLVDGILGVGIEEV+EQ+VGE A ESQD +AEEIP T E ETG++T+ VE
Sbjct: 154 LKIVMPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEVT---EGFETGRETKFVE 213
Query: 181 DDNHENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSE 240
DAANG F G NA PE K EY+AET QEE EKLK DE E IDGVSN YSE
Sbjct: 214 ---------DAANGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEHIDGVSNHYSE 273
Query: 241 SEQLENVATKTTEIEATREN---VNGEIKVPKVRSMEGIEVAEETSQGT----------- 300
SE+ E + T+ E +N V+ EI +PKVRS++GIE+ E TS+GT
Sbjct: 274 SEKSEKLTTEIAEAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPN 333
Query: 301 --AHNGNITTVINKQPDVKTQSQASIDREAQVLDR-KFSQPDRQTQAE------QRKQET 360
AHNG+I T+ NKQPD+K QSQA++DR+ +V D+ + SQP+ + QAE Q +ET
Sbjct: 334 SEAHNGSIATMTNKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKET 393
Query: 361 YKNVRELEELETNKEPEDTESPYLQSPAHEHEEKGVDQQGKKIETEDD--KAREECKSPQ 420
Y++ E +E ETN EPE SPYLQSP HEHEEKGV+QQGK +T+D+ +AREE SPQ
Sbjct: 394 YRSAWESKEFETNNEPEYIASPYLQSPEHEHEEKGVNQQGKSFQTQDEIKEAREESGSPQ 453
Query: 421 KETHEDSSKEAKQEKKQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG 454
+E HE S+KEAKQEK QDSKQFKMRTPIIIAGSALLASL IVVFN V+SK+REKNMRG
Sbjct: 454 REKHEQSTKEAKQEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Lcy12g006830 vs. ExPASy TrEMBL
Match:
A0A6J1EKH3 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433395 PE=3 SV=1)
HSP 1 Score: 473.4 bits (1217), Expect = 1.1e-129
Identity = 274/416 (65.87%), Postives = 314/416 (75.48%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIVITINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GTRIEI WGQPVQKMEITRW YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKL +GILGVGI+EV+E+E GEA FESQD +AE IPH+ +LET ETGK+T+L+ED +
Sbjct: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGEFGGENA+ EAFSK+EY AET EEIEKLK +E ED DG SNDYSE EQL
Sbjct: 187 -------GNGEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSECEQL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA-------------HNGN 304
E ATK TE E T+EN+NG+IKVPKV SMEGIEVAE TSQ TA HNG+
Sbjct: 247 ETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEHNGD 306
Query: 305 ITTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNK 364
I T+I K+ DVKTQ QASID+EAQ L+++ + +R T+AE K ETY+N REL K
Sbjct: 307 IATMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTREL------K 366
Query: 365 EPEDTESPYLQSPAHEHEEKGVDQQGK--------KIETEDDKAREECKSPQKETH 400
EPED E PYLQSPAHEHEEK + + K K++T D+ R + K+ H
Sbjct: 367 EPEDIEIPYLQSPAHEHEEKEISDEKKTTQSGHTTKVKTGRDEVRFQVMGMSKQGH 408
BLAST of Lcy12g006830 vs. ExPASy TrEMBL
Match:
A0A6J1J0B1 (uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753 PE=3 SV=1)
HSP 1 Score: 464.5 bits (1194), Expect = 4.9e-127
Identity = 267/379 (70.45%), Postives = 296/379 (78.10%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIVITINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GT+IEI WGQPVQKMEITR YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKLV+GILGVGIE V+EQE G+A FESQD +AE IPH+ +LET ETGKKT+LVED +
Sbjct: 127 MPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKLVEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGEFGGENA+ EAFSKIEY AET EEIEKLK +E ED DG SNDYSESEQL
Sbjct: 187 -------GNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA------------HNGNI 304
E ATK TE E T+EN+NG+I+VPKV SMEGIEVAE TSQ TA HNG++
Sbjct: 247 ETGATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHNGDM 306
Query: 305 TTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKE 364
T+I K+PDVKTQ QASID+E + F Q +R T+A K ETY+N REL KE
Sbjct: 307 ATMIKKKPDVKTQPQASIDQEQE----NFKQ-NRHTRAGLGKPETYRNTREL------KE 366
Query: 365 PEDTESPYLQSPAHEHEEK 372
PED E PYLQSPAHEHEEK
Sbjct: 367 PEDIEIPYLQSPAHEHEEK 366
BLAST of Lcy12g006830 vs. ExPASy TrEMBL
Match:
A0A5A7UWU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00820 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 4.7e-45
Identity = 178/472 (37.71%), Postives = 226/472 (47.88%), Query Frame = 0
Query: 1 MGMEFELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVIT 60
MG +FELKI PT DD SSTFELQLA+ +AT P L + G +T
Sbjct: 49 MGSDFELKIKPTIDDDTSSTFELQLAEGSAT---LMKPIPCFATLVRNVIGTLVRKSDVT 108
Query: 61 INGSGTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESI 120
+ P Q++ W +E ++ + + ++ IK D + +
Sbjct: 109 L-------------PPQQLAYGVWF----SEVLKYLTMLSMSTHFGVEPIK----DSDQV 168
Query: 121 LKILMPKLVDGILGVGIEEVREQEVGEAAFESQDYDAE-----EIPHSTAELETLETGKK 180
+P+ S D D ++ L + +K
Sbjct: 169 WPSEVPR------------------------SNDRDRSCLRLWKLAERPTWLTVIMKRRK 228
Query: 181 TRLVEDDNHENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVS 240
L+ + + +NAE E KIEYVAE +EIEKLK E ++
Sbjct: 229 PMLLME-------------QLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDE----- 288
Query: 241 NDYSESEQLENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGT--------- 300
+I VPK+RS+EGIEVAE TS+GT
Sbjct: 289 ----------------------------DIDVPKIRSVEGIEVAEVTSKGTASHKKETQT 348
Query: 301 ---AHNGNITTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRE 360
A NG+ T+INK+P VKTQSQASIDREA RE
Sbjct: 349 NAEARNGDKATMINKKPYVKTQSQASIDREA---------------------------RE 394
Query: 361 LEELETNKEPEDTESPYLQSPAHEHEEKGVDQQGKKIET--EDDKAREECKSPQKETHED 420
L+ELET+KEPED SPYLQ PA++H+EKG D++G+ +T E AREECKS THED
Sbjct: 409 LKELETDKEPEDIGSPYLQRPANQHDEKGADRKGRSFQTKYEVKDAREECKS----THED 394
Query: 421 SSKEAKQEKKQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG 454
SSKEAKQEKKQDSKQ KMRT IIIAGSALLASLV V FNLVKSK EKN++G
Sbjct: 469 SSKEAKQEKKQDSKQLKMRTSIIIAGSALLASLVTVAFNLVKSK-TEKNVKG 394
BLAST of Lcy12g006830 vs. ExPASy TrEMBL
Match:
A0A5D3CSD6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00020 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 4.4e-43
Identity = 138/269 (51.30%), Postives = 160/269 (59.48%), Query Frame = 0
Query: 199 ENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQLENVATKTTEIEATR 258
+NAE E KIEYVAE +EIEKLK E ++
Sbjct: 37 KNAETERLHKIEYVAEIQPDEIEKLKGSEMDE---------------------------- 96
Query: 259 ENVNGEIKVPKVRSMEGIEVAEETSQGT------------AHNGNITTVINKQPDVKTQS 318
+I VPK+RS+EGIEVAE TS+GT A NG+ T+INK+P VKTQS
Sbjct: 97 -----DIDVPKIRSVEGIEVAEVTSKGTASHKKETQTNAEARNGDKATMINKKPYVKTQS 156
Query: 319 QASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKEPEDTESPYLQSPAH 378
QASIDREA REL+ELET+KEPED SPYLQ PA+
Sbjct: 157 QASIDREA---------------------------RELKELETDKEPEDIGSPYLQRPAN 216
Query: 379 EHEEKGVDQQGKKIET--EDDKAREECKSPQKETHEDSSKEAKQEKKQDSKQFKMRTPII 438
+H+EKG D++G+ +T E AREECKS THEDSSKEAKQEKKQDSKQ KMRT II
Sbjct: 217 QHDEKGADRKGRSFQTKYEVKDAREECKS----THEDSSKEAKQEKKQDSKQLKMRTSII 240
Query: 439 IAGSALLASLVIVVFNLVKSKRREKNMRG 454
IAGSALLASLV V FNLVKSK EKN++G
Sbjct: 277 IAGSALLASLVTVAFNLVKSK-TEKNVKG 240
BLAST of Lcy12g006830 vs. NCBI nr
Match:
XP_023521223.1 (neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 572.0 bits (1473), Expect = 4.5e-159
Identity = 330/463 (71.27%), Postives = 370/463 (79.91%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIVITINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GTRIEI WGQPVQKMEITRW YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKL +GILGVGI+EV+EQE G+A FESQD +AE IPH+ +LET ETGK+T+L+ED +
Sbjct: 127 MPKLEEGILGVGIQEVKEQEAGKATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGEFGGENA+ EAFSKIEY AET EEIEKLK +E ED DG SNDYSESEQL
Sbjct: 187 -------GNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA------------HNGNI 304
E ATK TE E T+EN+NG+IKVPKV SMEGIEVAE TSQ TA HNG++
Sbjct: 247 ETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQKEKEGNAKEHNGDM 306
Query: 305 TTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKE 364
T+I K+PDVKTQSQASID+E + R +R T+AE K ETY+N REL KE
Sbjct: 307 ATMIKKKPDVKTQSQASIDQEQENFKR-----NRHTRAELGKPETYRNTREL------KE 366
Query: 365 PEDTESPYLQSPAHEHEEKGVDQQGKKIETEDD--KAREECKSPQKETHEDSSKEAKQEK 424
PED E PYLQSPAHEHEEK VDQ+GK +T+D+ +AREEC SPQK TH+DSSKEAKQEK
Sbjct: 367 PEDIEIPYLQSPAHEHEEKEVDQKGKSSQTKDETKEAREECNSPQKVTHQDSSKEAKQEK 426
Query: 425 KQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG 454
KQFKMR PII+AGSAL+ASLVIVVF+LVKSK+REKNMRG
Sbjct: 427 ----KQFKMRIPIIVAGSALVASLVIVVFSLVKSKKREKNMRG 446
BLAST of Lcy12g006830 vs. NCBI nr
Match:
KAG6607636.1 (hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037240.1 hypothetical protein SDJN02_00863, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 552.4 bits (1422), Expect = 3.7e-153
Identity = 318/463 (68.68%), Postives = 363/463 (78.40%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIV+TINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GTRIEI WGQPVQKMEITRW YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKL +GILGVGI+EV+E+E GEA FESQD +AE IPH+ +LET ETGK+T+L+ED +
Sbjct: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGE GGENA+ EAFSK+EY AET EEIEKLK +E ED DG SNDYSESE+L
Sbjct: 187 -------GNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA------------HNGNI 304
E ATK TE E T+EN+NG+IKVPKV EGIEVAE TSQ TA HNG++
Sbjct: 247 ETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDM 306
Query: 305 TTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKE 364
T+I K+PDVKTQ QASID+E + R +R T+ E K ETY+N +L KE
Sbjct: 307 ATMIKKKPDVKTQPQASIDQEQENFKR-----NRHTRVELGKPETYRNTWKL------KE 366
Query: 365 PEDTESPYLQSPAHEHEEKGVDQQGKKIETEDD--KAREECKSPQKETHEDSSKEAKQEK 424
PED E PYLQSPAHEHEEK VDQ+GK +T+D+ +AREEC SPQK TH+DSSKEAKQEK
Sbjct: 367 PEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEK 426
Query: 425 KQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG 454
KQFKMR PII+AGSAL+A+LVI VF+LVKSK+REKNMRG
Sbjct: 427 ----KQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG 446
BLAST of Lcy12g006830 vs. NCBI nr
Match:
XP_022143634.1 (uncharacterized protein LOC111013495 [Momordica charantia])
HSP 1 Score: 521.5 bits (1342), Expect = 7.0e-144
Identity = 312/478 (65.27%), Postives = 365/478 (76.36%), Query Frame = 0
Query: 1 MGMEFELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVIT 60
MG++FELKISP+ + S FELQLA+ T +P FWS+ET SMFILTAKLTGF+R+DI IT
Sbjct: 34 MGLDFELKISPSSS---FSNFELQLARGTPSP-FWSNETNSMFILTAKLTGFSREDIGIT 93
Query: 61 INGSGTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESI 120
ING+GTRIEIGWGQPVQ+MEITRWMYKKETETRRFKKIF IPDGVVLDEIKATYNDEESI
Sbjct: 94 INGTGTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 153
Query: 121 LKILMPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVE 180
LKI+MPKLVDGILGVGIEEV+EQ+VGE A ESQD +AEEIP T E ETG++T+ VE
Sbjct: 154 LKIVMPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEVT---EGFETGRETKFVE 213
Query: 181 DDNHENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSE 240
DAANG F G NA PE K EY+AET QEE EKLK DE E IDGVSN YSE
Sbjct: 214 ---------DAANGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEHIDGVSNHYSE 273
Query: 241 SEQLENVATKTTEIEATREN---VNGEIKVPKVRSMEGIEVAEETSQGT----------- 300
SE+ E + T+ E +N V+ EI +PKVRS++GIE+ E TS+GT
Sbjct: 274 SEKSEKLTTEIAEAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPN 333
Query: 301 --AHNGNITTVINKQPDVKTQSQASIDREAQVLDR-KFSQPDRQTQAE------QRKQET 360
AHNG+I T+ NKQPD+K QSQA++DR+ +V D+ + SQP+ + QAE Q +ET
Sbjct: 334 SEAHNGSIATMTNKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKET 393
Query: 361 YKNVRELEELETNKEPEDTESPYLQSPAHEHEEKGVDQQGKKIETEDD--KAREECKSPQ 420
Y++ E +E ETN EPE SPYLQSP HEHEEKGV+QQGK +T+D+ +AREE SPQ
Sbjct: 394 YRSAWESKEFETNNEPEYIASPYLQSPEHEHEEKGVNQQGKSFQTQDEIKEAREESGSPQ 453
Query: 421 KETHEDSSKEAKQEKKQDSKQFKMRTPIIIAGSALLASLVIVVFNLVKSKRREKNMRG 454
+E HE S+KEAKQEK QDSKQFKMRTPIIIAGSALLASL IVVFN V+SK+REKNMRG
Sbjct: 454 REKHEQSTKEAKQEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Lcy12g006830 vs. NCBI nr
Match:
XP_022926215.1 (neurofilament medium polypeptide-like [Cucurbita moschata])
HSP 1 Score: 473.4 bits (1217), Expect = 2.2e-129
Identity = 274/416 (65.87%), Postives = 314/416 (75.48%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIVITINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GTRIEI WGQPVQKMEITRW YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKL +GILGVGI+EV+E+E GEA FESQD +AE IPH+ +LET ETGK+T+L+ED +
Sbjct: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGEFGGENA+ EAFSK+EY AET EEIEKLK +E ED DG SNDYSE EQL
Sbjct: 187 -------GNGEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSECEQL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA-------------HNGN 304
E ATK TE E T+EN+NG+IKVPKV SMEGIEVAE TSQ TA HNG+
Sbjct: 247 ETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEHNGD 306
Query: 305 ITTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNK 364
I T+I K+ DVKTQ QASID+EAQ L+++ + +R T+AE K ETY+N REL K
Sbjct: 307 IATMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTREL------K 366
Query: 365 EPEDTESPYLQSPAHEHEEKGVDQQGK--------KIETEDDKAREECKSPQKETH 400
EPED E PYLQSPAHEHEEK + + K K++T D+ R + K+ H
Sbjct: 367 EPEDIEIPYLQSPAHEHEEKEISDEKKTTQSGHTTKVKTGRDEVRFQVMGMSKQGH 408
BLAST of Lcy12g006830 vs. NCBI nr
Match:
XP_022981685.1 (uncharacterized protein LOC111480753 [Cucurbita maxima])
HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-126
Identity = 267/379 (70.45%), Postives = 296/379 (78.10%), Query Frame = 0
Query: 5 FELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVITINGS 64
FELKISPTR DDPSSTFEL L K T+T F+SDET SMF+LTAKL GFARDDIVITINGS
Sbjct: 7 FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITINGS 66
Query: 65 GTRIEIGWGQPVQKMEITRWMYKKETETRRFKKIFCIPDGVVLDEIKATYNDEESILKIL 124
GT+IEI WGQPVQKMEITR YKKETETRRFKKIF IPDGV+LDEIKATYNDE+SILKIL
Sbjct: 67 GTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
Query: 125 MPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLVEDDNH 184
MPKLV+GILGVGIE V+EQE G+A FESQD +AE IPH+ +LET ETGKKT+LVED +
Sbjct: 127 MPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKLVEDTH- 186
Query: 185 ENEEDDAANGEFGGENAEPEAFSKIEYVAETPQEEIEKLKSDETEDIDGVSNDYSESEQL 244
NGEFGGENA+ EAFSKIEY AET EEIEKLK +E ED DG SNDYSESEQL
Sbjct: 187 -------GNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQL 246
Query: 245 ENVATKTTEIEATRENVNGEIKVPKVRSMEGIEVAEETSQGTA------------HNGNI 304
E ATK TE E T+EN+NG+I+VPKV SMEGIEVAE TSQ TA HNG++
Sbjct: 247 ETGATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHNGDM 306
Query: 305 TTVINKQPDVKTQSQASIDREAQVLDRKFSQPDRQTQAEQRKQETYKNVRELEELETNKE 364
T+I K+PDVKTQ QASID+E + F Q +R T+A K ETY+N REL KE
Sbjct: 307 ATMIKKKPDVKTQPQASIDQEQE----NFKQ-NRHTRAGLGKPETYRNTREL------KE 366
Query: 365 PEDTESPYLQSPAHEHEEK 372
PED E PYLQSPAHEHEEK
Sbjct: 367 PEDIEIPYLQSPAHEHEEK 366
BLAST of Lcy12g006830 vs. TAIR 10
Match:
AT1G76770.1 (HSP20-like chaperones superfamily protein )
HSP 1 Score: 107.1 bits (266), Expect = 3.8e-23
Identity = 74/205 (36.10%), Postives = 114/205 (55.61%), Query Frame = 0
Query: 1 MGMEFELKISPTRADDPSSTFELQLAKATATPFFWSDETPSMFILTAKLTGFARDDIVIT 60
M +E LKI+ T+ DD SS+ + ++A+ + S ET S+F L L GF +D I I
Sbjct: 1 MELELGLKITRTK-DDVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIE 60
Query: 61 INGSGTRIEIGWGQPVQKMEITRWM-YKKETETRRFKKIFCIPDGVVLDEIKATYNDEES 120
IN G I+I + V++M + +W+ +KKETE + FKK+F IPD V+LD+IKA +N+E+
Sbjct: 61 INKEGNLIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDG 120
Query: 121 ILKILMPKLVDGILGVGIEEVREQEVGEAAFESQDYDAEEIPHSTAELETLETGKKTRLV 180
L + MPK V GI G+ IEE E+E + + + + P + ET + ++
Sbjct: 121 TLTVTMPKKVKGITGLKIEEEDEEEEMKEPIVEEKTEEKTEPEEEIKEET-KPEEENEEA 180
Query: 181 EDDNHENEEDDAANGEFGGENAEPE 205
E+ E EE+ G E + E
Sbjct: 181 EEPQREEEEEVVEEGTRDHEGKKEE 203
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CPW6 | 3.4e-144 | 65.27 | uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1EKH3 | 1.1e-129 | 65.87 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433... | [more] |
A0A6J1J0B1 | 4.9e-127 | 70.45 | uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753... | [more] |
A0A5A7UWU5 | 4.7e-45 | 37.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CSD6 | 4.4e-43 | 51.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
XP_023521223.1 | 4.5e-159 | 71.27 | neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087... | [more] |
KAG6607636.1 | 3.7e-153 | 68.68 | hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022143634.1 | 7.0e-144 | 65.27 | uncharacterized protein LOC111013495 [Momordica charantia] | [more] |
XP_022926215.1 | 2.2e-129 | 65.87 | neurofilament medium polypeptide-like [Cucurbita moschata] | [more] |
XP_022981685.1 | 1.0e-126 | 70.45 | uncharacterized protein LOC111480753 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G76770.1 | 3.8e-23 | 36.10 | HSP20-like chaperones superfamily protein | [more] |