Lcy12g006160 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAAGAATATAGCTTCAGATTTGAGATGTTCATTGAAAATGGATTACGACATTTGAATAGACCAAATGTCATTCATTGTCCATGTTTGAAGTGTGTGAATGTAAAATTTCAAAATGTGAATATAGTAAGAGACCACTTATTTGTTCATGGTATCGATCAAAGCTATAAGACATGGATTTGGCATGGTGAATCACTATCAAAGAAGAAAGACAATGAAAATGTGTCTATTAGCGGAAAAGTTGAAGTCGAAGATGACAATGAAGATGTTGAGGACACAATAGAAATGTTTGAGGCTGCAAATAATTATTTTAATGACAAATCTAAGGTTTTTGACGAACTATTAGAAGATGCCAAGAAACCATTATACCTGGATTGTAATAATTTTACCAAGATATCTACTTTGGTAAAGTTATATAATTTTAAGGCGAAATTTGGATGGAGCGATAAGAGTTTCACTGAGCTATTGACATTACTTTGTGACATCTTACCAAGCCTTAATCAAATTCCAACTTCAACATATCAAGCAAAGAAGACTTTGTGTACTCTTGGAATGAAGTATGAGAAAATACACGCGTGTAGTAGTAATTGTTGTTTGTTTAGAAAGAAACTATCTGATGTAGAAGTATGCCCTATATGTGGAACATCAAGATGGACACTTATGACATCCTGCAGATGCACTGTCGTGGAAACAAGTAGACAATTTGTGGCCAGAGTTTGGTTTAAAACCTAGAAATCTTCGTCTTGCTCTTTTTGTGGATGGTGTCAATCCACACAGTGATCTCAGTAGTAGATATAATTGTTGGGCAGTTATGTTGGTGACGTATAATCTACCACCATGGTTGTGCATGAAACAGAAATTTTTATGTTAACTACATTAATATTTGACCCCAAACAACCAGGAAATGACATATATGTTTATTTAGCTCCGTTAGTTGAAGATTTGAAAATGCTTTGGAATGAGGGTGTAGAATGTTATGATGTACATGAAGAACGATTTTCCACACTCAAAGCTATTTTATTGTGGACTATTAATGATTTTCCTGCGTATGACAATTTGAGTGATTGTAGATAAAAGGATATCATGCATGTCCAATTTGTGGGGAGAAAATTGCATCAACTTATTTGCCTAAAGGAAAAAAGATGGCCTATCTTGGACATCGAAAGTTTTTACCCCATAACTGAAGGAGTGTACAAGACACTAGCGGAAGCAATTTGGATTGAAAACCTCTCGATTTCAATTAATTTTAGAATGAAAAGCATGTCAAAATCGAGCAAAAAAGCAGAACATTGAAGTTTACCCACCTTTTGGATGAACTCAAGTTGTTCCTTCGGTGGTTTTGGATCACAAATGAGTTGTTGACGACCACGAGAGTCTTCCCCGCTATCCTCCGGCCTTAGAACGGCTTGTGGGAGCCTTGAACGTGATGAATTTTGTTGAAGAAAGAGATGGATTTTGAGAGAGATTTTCTTTGTTTTTAACTTCGTGAAAGAACTCCAGCAAAACCATATGAATTGTCCACCTTTTCAGCTTCATCCTTTTCCTTATAAAGGGAGAATCTCGTGCAATAATAATCAAGCAAGAGAAGACATCACATTGCTTATGAAATTGGTGTAAATTTAGGTGGCATTCTATGAGATTAAGCATGGATGTACTTGGTGTTAAAAATCAGCCTATTTGCCTCTTGATTTTCTTTCTAAAAGAAAATCATTAATTAAATTAATTTCTATTTTAAAGATTAATCAAATAATCTTTAATGAAATCAATTTCTATAATTAAACAAATTTAATTATATTATATTTATCTAATTTTAATATCTTATATTAAAATAAATAATACACCAATCTAATCTCTCTCAATATCGATTTTGAATACGAATCCCTATTCATATCCAAAACTAAATATGTATCGTATACATGTCCTCGATATATCTCTAACTCTCCTTGTAGTTTAATTCATAATTAAACTTATAATACGTCAAATATATCACATATAATTAACGTTAAATTCCTAAACCGAATTTGAACGTTTCGAATTATCTCATCACTATGTTCTAAGGTTTATTCTGTATGAACTAGTAGGGGGACCTAATGGACCTACAGATCATGGGCTCCAATGATCCGATATTAACCGGCTAAACTCTTTTAACCTAGTTAACCAACATTCGTTAACTACCGGGACACTCCACTATAGCCCGATAATTGAACTCCCCTCACTGTAGATATATTTTTGTCCACCCGATATAACCATGATTAGTAAGTCGACCCTTCATAGGTTGTTCGTAACTAGAGCTGGGTCAAATGTCCATTTTACCCATGAAGTTACATCTTGTTTCTTAAGTCCCCACTAAGTCCCTAATGAACAATTGGTTTGTGGTCCGACCACTAAACCTAAAACCTCTCGGGCCAATGAGAGGGTGGGATCCGTCCAAATGCTAAATACTTGTTATGCTTCTTATGGAAGGAGAAGATTACGGTTAATATTCGTTCTTATTCATTTTATCATATTGTTGCATCAGTCCAAATGCTAAATACACTTTGGAGATTTTCTGGAATCTATGATAATCCAGTTGCACATCAACGACACCGTTCTTGGGAATTATTGAAATGATTACATAACAATGATGATTCTGCATGGGTAATCGGGGGGGGGGGGGACTTTAATGCCACTTTACTCAATGAAGACAAAGAAGGAGGTGCTCTTTCACGTCTATCTTATATGGATCAGTTTCGAAATGCTATAGATGATTGTAATTTGCAGGAGATGGAGTATGTGGGTGATATGTTTACTTGGTCAAACAGACAGCTGAACAGGTTGCAAATTAA ATGTCAGAAGAATATAGCTTCAGATTTGAGATGTTCATTGAAAATGGATTACGACATTTGAATAGACCAAATGTCATTCATTGTCCATGTTTGAAGTGTGTGAATGTAAAATTTCAAAATGTGAATATAGTAAGAGACCACTTATTTGTTCATGGTATCGATCAAAGCTATAAGACATGGATTTGGCATGGTGAATCACTATCAAAGAAGAAAGACAATGAAAATGTGTCTATTAGCGGAAAAGTTGAAGTCGAAGATGACAATGAAGATGTTGAGGACACAATAGAAATGTTTGAGGCTGCAAATAATTATTTTAATGACAAATCTAAGGTTTTTGACGAACTATTAGAAGATGCCAAGAAACCATTATACCTGGATTGTAATAATTTTACCAAGATATCTACTTTGACAGCTGAACAGGTTGCAAATTAA ATGTCAGAAGAATATAGCTTCAGATTTGAGATGTTCATTGAAAATGGATTACGACATTTGAATAGACCAAATGTCATTCATTGTCCATGTTTGAAGTGTGTGAATGTAAAATTTCAAAATGTGAATATAGTAAGAGACCACTTATTTGTTCATGGTATCGATCAAAGCTATAAGACATGGATTTGGCATGGTGAATCACTATCAAAGAAGAAAGACAATGAAAATGTGTCTATTAGCGGAAAAGTTGAAGTCGAAGATGACAATGAAGATGTTGAGGACACAATAGAAATGTTTGAGGCTGCAAATAATTATTTTAATGACAAATCTAAGGTTTTTGACGAACTATTAGAAGATGCCAAGAAACCATTATACCTGGATTGTAATAATTTTACCAAGATATCTACTTTGACAGCTGAACAGGTTGCAAATTAA MSEEYSFRFEMFIENGLRHLNRPNVIHCPCLKCVNVKFQNVNIVRDHLFVHGIDQSYKTWIWHGESLSKKKDNENVSISGKVEVEDDNEDVEDTIEMFEAANNYFNDKSKVFDELLEDAKKPLYLDCNNFTKISTLTAEQVAN Homology
BLAST of Lcy12g006160 vs. ExPASy TrEMBL
Match: A0A6J1DBH3 (uncharacterized protein LOC111018955 OS=Momordica charantia OX=3673 GN=LOC111018955 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.9e-42 Identity = 90/136 (66.18%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Lcy12g006160 vs. ExPASy TrEMBL
Match: A0A6J1E201 (uncharacterized protein LOC111025252 OS=Momordica charantia OX=3673 GN=LOC111025252 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.7e-41 Identity = 91/136 (66.91%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of Lcy12g006160 vs. ExPASy TrEMBL
Match: A0A6J1CXT3 (uncharacterized protein LOC111015258 OS=Momordica charantia OX=3673 GN=LOC111015258 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30 Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 0
BLAST of Lcy12g006160 vs. ExPASy TrEMBL
Match: A0A5D3CAP5 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00350 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.6e-23 Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0
BLAST of Lcy12g006160 vs. ExPASy TrEMBL
Match: A0A5D3DSZ9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00190 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.6e-23 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 0
BLAST of Lcy12g006160 vs. NCBI nr
Match: XP_022150919.1 (uncharacterized protein LOC111018955 [Momordica charantia]) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41 Identity = 90/136 (66.18%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Lcy12g006160 vs. NCBI nr
Match: XP_022158786.1 (uncharacterized protein LOC111025252 [Momordica charantia]) HSP 1 Score: 178.7 bits (452), Expect = 3.5e-41 Identity = 91/136 (66.91%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of Lcy12g006160 vs. NCBI nr
Match: XP_022145911.1 (uncharacterized protein LOC111015258 [Momordica charantia]) HSP 1 Score: 142.5 bits (358), Expect = 2.8e-30 Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 0
BLAST of Lcy12g006160 vs. NCBI nr
Match: TYK26897.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 0
BLAST of Lcy12g006160 vs. NCBI nr
Match: TYK08420.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23 Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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