Lcy12g004460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g004460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MuDRA-like transposase
Location	Chr12: 16282173 .. 16282925 (+)
RNA-Seq Expression	Lcy12g004460
Synteny	Lcy12g004460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAGCATTTTTGAAGTGCAAATATCGGGGTACTTTGAGAGTTGCCACTTGCTTAGATGGTAATAATCAAAATTTTCCTCTTGCCTTTGGCATTGTTGATAGAGAAACTGATAATTCAATAAAATGGTTCTTGACAAAGTTGAAAGGTGCAATAGGTGAAATTAAGGATTTAGTTTTTGTTACCGACCAAAATAGTAGTTTTGCAAAGTCTATTGCTTCTGTATTTCCCACCGCATCTCATGGTCTTTGTGTGCAACACTTGAGAGCAAATTTGTCCTCTAAGTTCAAGAATCAAGCAATAGATACTTTATTTTACAATGCCTCAAGAGCATACCATGAGTCAAAATTTCAAGAGTCATGGGATCACATTCTAGCATTTGATAATGGTATCGGAAAGTATTTAGAGGAAGTTGGACTTCTACATTGGGCACGTATGCATTGTCAAGGAAGACGATACACTATGATGACTACAAATATAGCAGAGTGCATGAATGCTATTTTGCTAGAAGCTAGAGAATTGCCAGTTGCTGCTTTTCTTGAACATGTGAGAGCTTTGCTACAGAGATGGTTTGGGGAGCATCGGGATGAAGCTTCAAAAGTTACATCTAAACTAACAAACTGGGCAGAAGAAATCGTACAGAAAACTCACGAGGAATCTTTAACAATGAAGGTTGATCCAATTGATTGTTATCATTTTCATGTGAAGGATGTAGATAATAAACAGGAGATTGTTAACATTCATACATAG

mRNA sequence

ATGGATGGAGCATTTTTGAAGTGCAAATATCGGGGTACTTTGAGAGTTGCCACTTGCTTAGATGGTAATAATCAAAATTTTCCTCTTGCCTTTGGCATTGTTGATAGAGAAACTGATAATTCAATAAAATGGTTCTTGACAAAGTTGAAAGGTGCAATAGGTGAAATTAAGGATTTAGTTTTTGTTACCGACCAAAATAGTAGTTTTGCAAAGTCTATTGCTTCTGTATTTCCCACCGCATCTCATGGTCTTTGTGTGCAACACTTGAGAGCAAATTTGTCCTCTAAGTTCAAGAATCAAGCAATAGATACTTTATTTTACAATGCCTCAAGAGCATACCATGAGTCAAAATTTCAAGAGTCATGGGATCACATTCTAGCATTTGATAATGGTATCGGAAAGTATTTAGAGGAAGTTGGACTTCTACATTGGGCACGTATGCATTGTCAAGGAAGACGATACACTATGATGACTACAAATATAGCAGAGTGCATGAATGCTATTTTGCTAGAAGCTAGAGAATTGCCAGTTGCTGCTTTTCTTGAACATGTGAGAGCTTTGCTACAGAGATGGTTTGGGGAGCATCGGGATGAAGCTTCAAAAGTTACATCTAAACTAACAAACTGGGCAGAAGAAATCGTACAGAAAACTCACGAGGAATCTTTAACAATGAAGGTTGATCCAATTGATTGTTATCATTTTCATGTGAAGGATGTAGATAATAAACAGGAGATTGTTAACATTCATACATAG

Coding sequence (CDS)

ATGGATGGAGCATTTTTGAAGTGCAAATATCGGGGTACTTTGAGAGTTGCCACTTGCTTAGATGGTAATAATCAAAATTTTCCTCTTGCCTTTGGCATTGTTGATAGAGAAACTGATAATTCAATAAAATGGTTCTTGACAAAGTTGAAAGGTGCAATAGGTGAAATTAAGGATTTAGTTTTTGTTACCGACCAAAATAGTAGTTTTGCAAAGTCTATTGCTTCTGTATTTCCCACCGCATCTCATGGTCTTTGTGTGCAACACTTGAGAGCAAATTTGTCCTCTAAGTTCAAGAATCAAGCAATAGATACTTTATTTTACAATGCCTCAAGAGCATACCATGAGTCAAAATTTCAAGAGTCATGGGATCACATTCTAGCATTTGATAATGGTATCGGAAAGTATTTAGAGGAAGTTGGACTTCTACATTGGGCACGTATGCATTGTCAAGGAAGACGATACACTATGATGACTACAAATATAGCAGAGTGCATGAATGCTATTTTGCTAGAAGCTAGAGAATTGCCAGTTGCTGCTTTTCTTGAACATGTGAGAGCTTTGCTACAGAGATGGTTTGGGGAGCATCGGGATGAAGCTTCAAAAGTTACATCTAAACTAACAAACTGGGCAGAAGAAATCGTACAGAAAACTCACGAGGAATCTTTAACAATGAAGGTTGATCCAATTGATTGTTATCATTTTCATGTGAAGGATGTAGATAATAAACAGGAGATTGTTAACATTCATACATAG

Protein sequence

MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLVFVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQESWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAFLEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVDNKQEIVNIHT

Homology

[Close]

BLAST of Lcy12g004460 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 33/125 (26.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 4   AFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLVFVT 63
           ++   KY+  L +   ++ + Q   L  G++  +T  +  W +     A+G  K  V +T
Sbjct: 218 SYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLT 277

Query: 64  DQNSSFAKSIASVFPTASHGLCVQH----LRANLS--SKFKNQAIDTLFYNASRAYHESK 123
           DQN++   +IA+V P   H  C+ H    L  NL   S +++  +  LF    R++ E +
Sbjct: 278 DQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEE 337

[Close]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.2e-96
Identity = 173/250 (69.20%), Postives = 206/250 (82.40%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           +DG  LK KYRGTL VATCLDGNNQ +P+AFGIVD+ETD+SIKWF  KLKGAIGE+KDL+
Sbjct: 384 IDGTVLKNKYRGTLIVATCLDGNNQIYPIAFGIVDKETDDSIKWFFEKLKGAIGEVKDLI 443

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FV+D+N+S AKSIA VFPTA HGLC+ HL+ NLS+KF N+ ID LF NA++AY ES+F+E
Sbjct: 444 FVSDRNNSIAKSIAIVFPTAFHGLCIHHLKQNLSAKFNNETIDYLFVNAAKAYRESQFRE 503

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
            W+ I AFDNG+G YLEEVGL  W R++C GRRY MMTTNIAE MNA+L EAREL V + 
Sbjct: 504 LWERISAFDNGVGMYLEEVGLSRWTRIYCPGRRYNMMTTNIAESMNALLKEARELHVVSV 563

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           +EHVRALLQRWF E RDEASKVTS LT WAEEIV K  ++S TMKV+ I+C+ FHV DVD
Sbjct: 564 IEHVRALLQRWFSERRDEASKVTSTLTKWAEEIVHKNQDQSTTMKVNSINCHQFHVVDVD 623

Query: 241 NKQEIVNIHT 251
            K+E VN++T
Sbjct: 624 -KEETVNLNT 632

[Close]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL
Match: A0A2I7YUI4 (MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.7e-95
Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD SI+WFL KLKGAIGE+ +L 
Sbjct: 432 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDASIQWFLEKLKGAIGEVPNLG 491

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + F+K IASVFP+A HGLCVQHL  NL+ K+KN  I TLFYNASR Y ES F E
Sbjct: 492 FVTDRKTCFSKCIASVFPSAFHGLCVQHLTQNLNDKYKNDTIATLFYNASRTYRESTFSE 551

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W  ILAF N  GKYL +VG+  W+R HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 552 AWRSILAFPNDSGKYLNDVGITRWSRFHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 611

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LEHVRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 612 LEHVRALLQRWFWERREEGIKVTSTLTKWAELVLQKKQERALTMKVNPIDCYQFHVKDLD 671

Query: 241 NKQEIVNIHT 251
            K+E++N+HT
Sbjct: 672 -KEEVINLHT 680

[Close]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL
Match: A0A5A7TQS3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1770G00270 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.7e-95
Identity = 170/250 (68.00%), Postives = 201/250 (80.40%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD+SI+WFL KLKGAIGE+ +L 
Sbjct: 351 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDDSIQWFLEKLKGAIGEVPNLG 410

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTDQ + F K I+SVFP+A HGLCVQHL  NL  K+KN  + TLFYNASR Y ES F E
Sbjct: 411 FVTDQKTCFVKGISSVFPSAFHGLCVQHLSQNLHDKYKNDTVATLFYNASRTYRESTFVE 470

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W H+LAF NG GKYL +VG+  W+R+HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 471 AWRHLLAFPNGSGKYLNDVGIARWSRVHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 530

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LE+VRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 531 LENVRALLQRWFWERREEGIKVTSTLTKWAELVIQKKQEGALTMKVNPIDCYQFHVKDLD 590

Query: 241 NKQEIVNIHT 251
            K+E+VN+ T
Sbjct: 591 -KEEVVNLQT 599

[Close]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL
Match: A0A6N0C346 (MURA transposase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.7e-95
Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD SI+WFL KLKGAIGE+ +L 
Sbjct: 432 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDASIQWFLEKLKGAIGEVPNLG 491

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + F+K IASVFP+A HGLCVQHL  NL+ K+KN  I TLFYNASR Y ES F E
Sbjct: 492 FVTDRKTCFSKCIASVFPSAFHGLCVQHLTQNLNDKYKNDTIATLFYNASRTYRESTFSE 551

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W  ILAF N  GKYL +VG+  W+R HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 552 AWRSILAFPNDSGKYLNDVGITRWSRFHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 611

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LEHVRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 612 LEHVRALLQRWFWERREEGIKVTSTLTKWAELVLQKKQERALTMKVNPIDCYQFHVKDLD 671

Query: 241 NKQEIVNIHT 251
            K+E++N+HT
Sbjct: 672 -KEEVINLHT 680

[Close]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL
Match: A0A5A7TEC4 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00700 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.6e-95
Identity = 170/250 (68.00%), Postives = 202/250 (80.80%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD+SI+WFL KLKGAIGE+ +L 
Sbjct: 382 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDDSIQWFLEKLKGAIGEVPNLG 441

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + FAK I+SVFP+A HGLCVQHL  NL  K+KN  + TLFYNASR Y ES F E
Sbjct: 442 FVTDRKTCFAKGISSVFPSAFHGLCVQHLSQNLHDKYKNDTVATLFYNASRTYRESTFVE 501

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W H+LAF NG GKYL +VG+  W+R+HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 502 AWRHLLAFPNGSGKYLNDVGIARWSRVHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 561

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LE+VRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 562 LENVRALLQRWFWERREEGIKVTSTLTKWAELVIQKKQEGALTMKVNPIDCYQFHVKDLD 621

Query: 241 NKQEIVNIHT 251
            K+E+VN+ T
Sbjct: 622 -KKEVVNLQT 630

[Close]

BLAST of Lcy12g004460 vs. NCBI nr
Match: XP_022155431.1 (uncharacterized protein LOC111022579 isoform X1 [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 8.8e-96
Identity = 173/250 (69.20%), Postives = 206/250 (82.40%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           +DG  LK KYRGTL VATCLDGNNQ +P+AFGIVD+ETD+SIKWF  KLKGAIGE+KDL+
Sbjct: 384 IDGTVLKNKYRGTLIVATCLDGNNQIYPIAFGIVDKETDDSIKWFFEKLKGAIGEVKDLI 443

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FV+D+N+S AKSIA VFPTA HGLC+ HL+ NLS+KF N+ ID LF NA++AY ES+F+E
Sbjct: 444 FVSDRNNSIAKSIAIVFPTAFHGLCIHHLKQNLSAKFNNETIDYLFVNAAKAYRESQFRE 503

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
            W+ I AFDNG+G YLEEVGL  W R++C GRRY MMTTNIAE MNA+L EAREL V + 
Sbjct: 504 LWERISAFDNGVGMYLEEVGLSRWTRIYCPGRRYNMMTTNIAESMNALLKEARELHVVSV 563

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           +EHVRALLQRWF E RDEASKVTS LT WAEEIV K  ++S TMKV+ I+C+ FHV DVD
Sbjct: 564 IEHVRALLQRWFSERRDEASKVTSTLTKWAEEIVHKNQDQSTTMKVNSINCHQFHVVDVD 623

Query: 241 NKQEIVNIHT 251
            K+E VN++T
Sbjct: 624 -KEETVNLNT 632

[Close]

BLAST of Lcy12g004460 vs. NCBI nr
Match: XP_031742570.1 (uncharacterized protein LOC116404380 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 5.7e-95
Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD SI+WFL KLKGAIGE+ +L 
Sbjct: 33  MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDASIQWFLEKLKGAIGEVPNLG 92

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + F+K IASVFP+A HGLCVQHL  NL+ K+KN  I TLFYNASR Y ES F E
Sbjct: 93  FVTDRKTCFSKCIASVFPSAFHGLCVQHLTQNLNDKYKNDTIATLFYNASRTYRESTFSE 152

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W  ILAF N  GKYL +VG+  W+R HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 153 AWRSILAFPNDSGKYLNDVGITRWSRFHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 212

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LEHVRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 213 LEHVRALLQRWFWERREEGIKVTSTLTKWAELVLQKKQERALTMKVNPIDCYQFHVKDLD 272

Query: 241 NKQEIVNIHT 251
            K+E++N+HT
Sbjct: 273 -KEEVINLHT 281

[Close]

BLAST of Lcy12g004460 vs. NCBI nr
Match: XP_031744339.1 (uncharacterized protein LOC116404987 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 5.7e-95
Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD SI+WFL KLKGAIGE+ +L 
Sbjct: 146 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDASIQWFLEKLKGAIGEVPNLG 205

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + F+K IASVFP+A HGLCVQHL  NL+ K+KN  I TLFYNASR Y ES F E
Sbjct: 206 FVTDRKTCFSKCIASVFPSAFHGLCVQHLTQNLNDKYKNDTIATLFYNASRTYRESTFSE 265

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W  ILAF N  GKYL +VG+  W+R HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 266 AWRSILAFPNDSGKYLNDVGITRWSRFHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 325

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LEHVRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 326 LEHVRALLQRWFWERREEGIKVTSTLTKWAELVLQKKQERALTMKVNPIDCYQFHVKDLD 385

Query: 241 NKQEIVNIHT 251
            K+E++N+HT
Sbjct: 386 -KEEVINLHT 394

[Close]

BLAST of Lcy12g004460 vs. NCBI nr
Match: KAA0045464.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 358.2 bits (918), Expect = 5.7e-95
Identity = 170/250 (68.00%), Postives = 201/250 (80.40%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD+SI+WFL KLKGAIGE+ +L 
Sbjct: 351 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDDSIQWFLEKLKGAIGEVPNLG 410

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTDQ + F K I+SVFP+A HGLCVQHL  NL  K+KN  + TLFYNASR Y ES F E
Sbjct: 411 FVTDQKTCFVKGISSVFPSAFHGLCVQHLSQNLHDKYKNDTVATLFYNASRTYRESTFVE 470

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W H+LAF NG GKYL +VG+  W+R+HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 471 AWRHLLAFPNGSGKYLNDVGIARWSRVHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 530

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LE+VRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 531 LENVRALLQRWFWERREEGIKVTSTLTKWAELVIQKKQEGALTMKVNPIDCYQFHVKDLD 590

Query: 241 NKQEIVNIHT 251
            K+E+VN+ T
Sbjct: 591 -KEEVVNLQT 599

[Close]

BLAST of Lcy12g004460 vs. NCBI nr
Match: XP_031745075.1 (uncharacterized protein LOC116405252 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 5.7e-95
Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           MDG FLK KYRG L VA CLDGNNQ +PLAFG+VDRETD SI+WFL KLKGAIGE+ +L 
Sbjct: 432 MDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRETDASIQWFLEKLKGAIGEVPNLG 491

Query: 61  FVTDQNSSFAKSIASVFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHESKFQE 120
           FVTD+ + F+K IASVFP+A HGLCVQHL  NL+ K+KN  I TLFYNASR Y ES F E
Sbjct: 492 FVTDRKTCFSKCIASVFPSAFHGLCVQHLTQNLNDKYKNDTIATLFYNASRTYRESTFSE 551

Query: 121 SWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVAAF 180
           +W  ILAF N  GKYL +VG+  W+R HC GRRY MMTTNIAE MN+IL E R+LP+A+F
Sbjct: 552 AWRSILAFPNDSGKYLNDVGITRWSRFHCPGRRYNMMTTNIAESMNSILKEPRDLPIASF 611

Query: 181 LEHVRALLQRWFGEHRDEASKVTSKLTNWAEEIVQKTHEESLTMKVDPIDCYHFHVKDVD 240
           LEHVRALLQRWF E R+E  KVTS LT WAE ++QK  E +LTMKV+PIDCY FHVKD+D
Sbjct: 612 LEHVRALLQRWFWERREEGIKVTSTLTKWAELVLQKKQERALTMKVNPIDCYQFHVKDLD 671

Query: 241 NKQEIVNIHT 251
            K+E++N+HT
Sbjct: 672 -KEEVINLHT 680

[Close]

BLAST of Lcy12g004460 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 72.8 bits (177), Expect = 4.4e-13
Identity = 62/263 (23.57%), Postives = 110/263 (41.83%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           +D   L  KY+  L +A+ +D  N+ FPLAF +    + +S +WF TK++  + + KDL 
Sbjct: 381 VDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKDLC 440

Query: 61  FVTDQNSSFAKSIASVF---------PTASHGLCVQHLRANLSSKFKNQAIDTLFYNASR 120
            +    SS  + I +V          P A H  C+ HLR+     F++  +++L   A  
Sbjct: 441 LI----SSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGS 500

Query: 121 AYHESKFQESWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLE 180
              + +F    + I   +    K+L+++    WA  H  G RY ++  +      A+   
Sbjct: 501 TNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGIIEID----REALFAV 560

Query: 181 ARELPVAAFLEHVRALLQRWFGEHRDEASKVTSKLTN-------WAEEIVQKTHE---ES 240
            R  P          +L   F E R    K  S + +       + E  + K  E   +S
Sbjct: 561 CRGFPYCTVAMTGGVMLM--FDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDS 620

Query: 241 LTMKVDPIDCYHFHVKDVDNKQE 245
           +   +  ++   F V +   K+E
Sbjct: 621 IPYVITQLERDSFKVSESSEKEE 633

[Close]

BLAST of Lcy12g004460 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10
Identity = 39/165 (23.64%), Postives = 70/165 (42.42%), Query Frame = 0


Query: 1   MDGAFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLV 60
           +D   L C+Y+  L +A+ +D  N+ FPLAF +    + +  +WFLT ++  + + K L 
Sbjct: 388 VDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEVSTDIWRWFLTGIREKVTQRKGLC 447

Query: 61  FVTDQNSSFAKSIAS-----VFPTASHGLCVQHLRANLSSKFKNQAIDTLFYNASRAYHE 120
            ++  +      +         P A H   + H  +  S  F +  +      A     +
Sbjct: 448 LISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQK 507

Query: 121 SKFQESWDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTN 161
            +F    + I   +    K+L++     WA  H  GRRY +M  N
Sbjct: 508 DEFVSYMNDIKEKNPEARKWLDQFPQNRWALAHDNGRRYGIMEIN 552

[Close]

BLAST of Lcy12g004460 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-10
Identity = 44/177 (24.86%), Postives = 79/177 (44.63%), Query Frame = 0


Query: 9   KYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLVFVTDQNSS 68
           KY+  L +A+  D  NQ FPLAF +    + +S +WFLT+++  + + + +  ++  +  
Sbjct: 392 KYKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPD 451

Query: 69  FAKSIAS-----VFPTASHGLCVQHLRANLSSKFK--NQAIDTLFYNASRAYHESKFQES 128
               I         P A H  C+ HL + L S     +  +  L   A  +  + +F   
Sbjct: 452 ILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSY 511

Query: 129 WDHILAFDNGIGKYLEEVGLLHWARMHCQGRRYTMMTTNIAECMNAILLEARELPVA 179
              I   +    K+L++     WA  H  GRRY +M  +  E + A+    R++ +A
Sbjct: 512 MKEIKERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAVCKRFRKVAMA 567

[Close]

BLAST of Lcy12g004460 vs. TAIR 10
Match: AT1G76320.1 (FAR1-related sequence 4 )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 33/125 (26.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 4   AFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLVFVT 63
           ++   KY+  L +   ++ + Q   L  G++  +T  +  W +     A+G  K  V +T
Sbjct: 218 SYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLT 277

Query: 64  DQNSSFAKSIASVFPTASHGLCVQH----LRANLS--SKFKNQAIDTLFYNASRAYHESK 123
           DQN++   +IA+V P   H  C+ H    L  NL   S +++  +  LF    R++ E +
Sbjct: 278 DQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEE 337

[Close]

BLAST of Lcy12g004460 vs. TAIR 10
Match: AT1G76320.2 (FAR1-related sequence 4 )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 33/125 (26.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 4   AFLKCKYRGTLRVATCLDGNNQNFPLAFGIVDRETDNSIKWFLTKLKGAIGEIKDLVFVT 63
           ++   KY+  L +   ++ + Q   L  G++  +T  +  W +     A+G  K  V +T
Sbjct: 218 SYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLT 277

Query: 64  DQNSSFAKSIASVFPTASHGLCVQH----LRANLS--SKFKNQAIDTLFYNASRAYHESK 123
           DQN++   +IA+V P   H  C+ H    L  NL   S +++  +  LF    R++ E +
Sbjct: 278 DQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEE 337

The following BLAST results are available for this feature:

BLAST of Lcy12g004460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQJ7	1.6e-04	26.40	Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=...	[more]

BLAST of Lcy12g004460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRN0	4.2e-96	69.20	uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A2I7YUI4	2.7e-95	68.40	MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
A0A5A7TQS3	2.7e-95	68.00	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A6N0C346	2.7e-95	68.40	MURA transposase OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
A0A5A7TEC4	3.6e-95	68.00	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3...	[more]

BLAST of Lcy12g004460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155431.1	8.8e-96	69.20	uncharacterized protein LOC111022579 isoform X1 [Momordica charantia]	[more]
XP_031742570.1	5.7e-95	68.40	uncharacterized protein LOC116404380 [Cucumis sativus]	[more]
XP_031744339.1	5.7e-95	68.40	uncharacterized protein LOC116404987 [Cucumis sativus]	[more]
KAA0045464.1	5.7e-95	68.00	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
XP_031745075.1	5.7e-95	68.40	uncharacterized protein LOC116405252 [Cucumis sativus]	[more]

BLAST of Lcy12g004460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	4.4e-13	23.57	MuDR family transposase	[more]
AT1G64255.1	2.7e-10	23.64	MuDR family transposase	[more]
AT1G49920.1	6.0e-10	24.86	MuDR family transposase	[more]
AT1G76320.1	1.2e-05	26.40	FAR1-related sequence 4	[more]
AT1G76320.2	1.2e-05	26.40	FAR1-related sequence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 1..92 e-value: 7.2E-17 score: 61.6
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 2..249
None	No IPR available	PANTHER	PTHR31973:SF106	OS09G0268600 PROTEIN	coord: 2..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g004460.1	Lcy12g004460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0008270	zinc ion binding