Lcy12g004410 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g004410
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionAnkyrin repeat-containing protein
LocationChr12: 16206484 .. 16218540 (-)
RNA-Seq ExpressionLcy12g004410
SyntenyLcy12g004410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGACGTTTTTCCTTTAAAAACTTTTCACTATTTAACCGTGGTTCTTCCTCGACTGAATTGAGAACATGAGTTGAAACAAAAACATGGTTCCTTGGAAGAATCAAAATTTGAGAACATGGAGAAGGAGGAGAAGAATAATATTGAAACTGAAACGTATGGAAAAGTCCCAACATCAGACTCAGAATCAACATGGCCAAGCATCTGTCTCAGATCCCAGAATTTGCAGCAATTTCATTGGCCAATCATCTTTATTTCGATTGGCAGATGAGTTTCCCAATATTGTTGGAGTAGAAGAAGAGATTGTTGTTGGAGACAACCTCACTGTTCCTCCGCCGCCTACGGCCAATGACGGCCATTTAGAAGCGGAGAGCCATACAATTGACGTCGCAGGATCCTCGGATGATGAACTTAATCCAGTTGCAAACCCCATAACAGGTATGCAATTCTAATTTATTAGTGTGATATTTTTTTTTTTTTTGTTAAATTTTAAGTTTAGTTTCGGAACTTCTATGTTTGTATCTGTTTTATAATTGAACTTTAAAAAGTGTCTAGGTAAGTTCTTCCGTATTTGAATTTTCAATTTTAAGTCTAATATATATTTGACCTATCCAATATTTTTTTTAGATTCTGCAAATTTATTAGACTCAAAATTTAATGTTTAAAGGTTCTATTAACCATGAAATTCTATTTTAAATCTAATAGATTAAGAATTTCATATCTAATAGATTAGTTAATTTTTAAATATATTTTAATATGTAAGGGAATTTCATATTTAATAGATTAGTTAATTTTTAAATATATTTTAATATGTAAGGGATCTGTCAAACAAAAATTTGGAAGTTCAAGACCAATATATTACATATGTTTAGAAGTTTTGGGTTCTATTGGACACAAAAAGTAGAAATTTCAATGACGAATTAGATACTTTTTAAAGCTTAATAACCTTTAGATACAAACTTACAAGTTTAATGATTAAACTCTTAATTTAACAACCATTTTCTTCGTTCCATTTATCTTCATTTTTTATTTTTTAGATAGATTTTAGTCTCTTAAATTTTTAATGGTATAATTTAACTTTTTAACTCTAAAAGATTTTTCTAAATAAAAAAAATTGAAAAACGTTAAATATATTATTTCTAAAAAATCAAAACAAGGAAAATAAATGTAAACAAATGATGGAGTTCAACCATGATGTGGGTGGGGAAATGGGACCAAACCTTTCAACTTTAAAGAATATAATTAATTCTTATCCATTAAATTATACTTGAATGGAAACAATTAGAGGTTGTAGCAGAACTAGGTTTAGATTAGAACAAAGCTTGTCCCTTCACGCCAACATAGAAAGAGATTCTCATAATGTATGATACTTTAATATAAATCTCTTTCTCAACGAAGTTGAATCAAGTCACCCCTTGAAGTGAGAATGGGTTTAGCTCACATACATTATTTGATGAAAGCACTTCACTTGATCTGCCAACTCAAAGTGACTTGTCAGCCACACTTAATATTTATTTATTTTGAGTACATCAACATTTGGGAGTGGGGGATTCGAACCTCTGACCTCTTTGTCGAGGTTATATGTTAATTACCGTTGAGTTATGCTCGTTTTGGCTCAACCACACTTATTTTGATGATAGAGTGATAAAAAGAAATCTATAATTTGAAGCAAAATGAGATAACCATTTGTTTTGGACGAAAATAATGTATTTTTCGTCACTGGAATTTGAAATTTTGTGTTTATTTGGTTTTTGAGGTTCCAAAAAGATTACAATGATTGTATCATAGCCAATCTAGACAGGGTTATGAACGAACTTGTCCCTAATAGAACCAGAAACCTTTTTTTCCGACCAAAAAGATGATTTTGGAAACGAAAAAAAAAAGGGAAAAAAAAAAACTAATAAATGTTTGAGCAAGTGAATATAATGCCTTACCTAAACCAAATTTATATAATTTCAAAATCCAACACCTAAAGACGAAGAAAAATGGTACTAAGAATATAATTATCTGCCTGTTTTTTCCCCATTTAAAAACCACATCGTTAGGAAGGCCATGTTTGTTGGGTCCAAGATTCGTAGGTGGGCACTGGCTAGAGAAGAGAGAGAAGAATAAAGAAGGATAATTGTAATGGGTGGCAACATGAGGGAAAATAATGGCAAATATAGCAATTTTTTAAAATATTTGCAAATATGGCAAAATTTTTGAATTAATTTTTTATATTCCTAAATTGCCCCTGCCCCTGATTGGCGAGCGCATCTTTTTCTTCCTCGTCAGGTTTTTTTTTTTTTTTTTATTGATAGAAATCTTCTATCACTGATAGAAAGTCTTTCTATCACTGATAGATCTATCAGTGGTAGAAAGACTTTCTATCAGTGATAGAAAGTTTCTATCAGTGATAGAAAGTTTCTATCAATAAAGTTTCTATCACTGATAGATTCTATCAGTGGTAGAAACATTTTCTATCAGTGATAGAAAGTTTCTATCACTAATAGAATAAAGTTTCTATCAGTGATAGAAGATTTTTATCACTGATAGAAACTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAAACTGATTGGCGCGCGCATCTTCTTCTTCCTCGTCAATTTTTATATATATATTGATAGAAATCTTCTATGATAGAAAGTCTTTCTATCACTGATAGATTCTATCAGTGGTAGAAAAATTTTCTATCAGTGATAGAAAGTTTTCTATCAGTGATAGAAAGTTTTCTATCAGTGATGGGCATTTTAGTAATTTTACTTTTCTGATGGTGAGATTTTGCCATTTTTACAAATATTTCTGCGGACTGCTACTTTTGCAATTAGTTTGGGCCATTTTGCTACTTTTGCAACTGGCCCAATAAAGAAAGAGAGAAGGAAAGAAAAACCTAGAAAAAAAAAAAATATATATATATATAATCTTTTTAAAAATTTTAACAATCGTCAATACAAAGATGCCACCTTATCTTTATATAAGTCAATTGCTGTCAAACTTAATGATCATTTAAAATCATCACGTTTCCAACATAAAAAACCAAAGTGTATTCTCTATGAAATTTGAAGAATTAAATGTATATTTGGAAGCGATTTTGAAATGATTAAAATCACTTTTGTTCATATTCTAAATCACTCCGAAATAAGTCTTTAATAATTCAATATCAATTTTGATGATATTAAAATCATGTGTACAACCCTAAAATTTTTAATTTTAGGTTTAGTATTTCTTTTTTTAAAACATATTTTAAATATGTCCTTGTTAATTTAATTTAATTTTGCCAATTTATTGTTTATACTATCAAACATCTAAAAGGACCTAATATTATACTTAAAGATTGAGACTAATTAATGAGATCCAAAATTACAAGTTTAGTGAGGTACTAAAAATCTATTACAGTACAAAGATAAAATAGACAAAAGCTTAAAAAGTTTAATGGATGCTTAGATTTGGAGACCAAATGTATAATTTAAACATCTTTTTTTAATACAAGGGATAGCGATTTGACCATAAGTAGCAGAAAGGTTTGAGGATTATTATTTGAATATTTCTAGAAGAAAATATATATTCTTTGTTTATTTTTAAAATATTTTGAAGGTTATATATTTTTTTTTTTTTTTTTGAGGAGAACAAAACAGAAAGACTAAACATGAAAAGAAGATATTACATCCAAATGAGTCATGTCATGAACTAAGCTGCCTTGAGCCCAAGGGGGACAATCCTCGATCCAGACTTCAGAGCGCTTCGTTGTGCGAGCATGAGTGGCTAGACTATGGGCAACCTTATTCCCATCTCTAGGAGTAAATAAGAACCCCCTGATTTGATGGGCATGGAATAATTGCTTGAGCTGAACAATGAGGGGAGCGATCTCATTGAAATGTTGGTCATGGTCATGCAATAGATTCCAAACTATTTTACAATCTATCTTCATCCAGATTGGCGTAAGTCCAGATTCCAACGCTATTGTTACCCCATCTAGAAGAGCTTGAGCTTTCGCCCATTCCACCGAACAACACGTTCTCCTGAACAGTTCTGCAGTGGCCATGATCTCTCCTTTTGAATTTCGAATAACAATGCCTGAACCCATCTCGCCATTAGATATTGTTGCATCGACATTCAGCCTGAAATGGGTCTGTGGTGGTGGGGACCAGGTTGCAGAATGACTAGGATCACCAATCGTCGCCCTCGCCTCTCCTTTACTTCTGTTTGGGTGAGCCTCTACATATTCAGAGATGTAATTTGATGCCCAGGCAATAGGATCATCTGTCTGTCTATGTGGGAGAGAGTTGCCCTGAAAGACTGCATGGTTTCGATTATTCCAGATGGACCACAAAGCTGCTGCAAAAATCAACATGTCTTCCATACATAGAGTCTCTTGGGCCCTGCAAAAGAGATCGAGGATATTAGTAAAACGATCATCAATGAAAGTTTGTACCGGCGTCCAACAAGCCCAAAGCTTTTTTGTCTTCTTGCACCCCCATAGAGCATGGATTACTGTCTCATTTGTTTTCCTGCACATGGGGCAACATGGGTCACACAAGATATGTCTTTTTATGAGATTCATCCTACATGGCAATATATCTAAGCTGGCATTCCAAACAAAGATTTTAATTTTGTTTGGAATGTTTAAATTCCAAAGAGTTTTCCACCAGCTGGAGATAGATGAATCAGATGATGAAGATTCTCCTTGGGAGTCTTCCAATGCAAGCTTATACCCACTCAGTACAGTGTATCTGCCCCTTTTATCATAGTGCCAGAAGAAACTGTCTGGATGTTGAGCACCTGCAATGGGAATTTCCTGAATTTTTTCTACATCGTCCTGCACAAAAAGATCCGTTAGTAAATTTACATTCCAGGATTGACTACTAGAGAAAAGGTTTTTGACTCTATAGTCAGTCAGAGGTCGTTTGAGCGAGAGTAGTTTAAAAGTCTTCATCCTTGGAATCCACTTATCCTCATAGATGTCAATGGATTCACCATTCCCAATCCTCCATCGACCACCTTTCATTGCCAATTCTCTGCCCCATAAAATTCCTCGCCACACATATGATGGTCTGCCCCCCAAACCTGCTTTCAAGAACTCATGATGAGGATAATATCTTGCTTTCAGAACTTGTGCCACTAAAGATTGAGGTCTCTGTAGTAGTCTCCAAGAGTGTTTCGCCAATAAAGCTTGATTAAAAAGCCTAAGATCTCTGAAGCCCATGCCTCCTCTTTCCTTCGGTTTTGTCATGGCTCCCCATTTCAACCAGTGGATTTTTCCCCCTTGATCAGAGCTTCCCCACCAGAAGTTAGCCATCATCCTGTTCAGTTCGTCGCAGCAACCTTGTGGAAGTTTAAAGCATGAGAGGGTATACGTGGGAATTGCCTGAGCAACTGCCTTTATAAGAGTTTCCTTTCCAGTTGAAGAAAACATCTTCCCTTTCCAACCCTGAAGAACTTTTTGGACCTTACTTTTGATGTAATTCAACGGCGCTTTCTTGTTTCTTGAAAGGGAAGATGGGCAGCCGAGGTACTTTCCATGGTCAGCTACTATTTTAACCTTCAAAATATTGGCCAATTCGCTCCGTATGTTGTTTGCAGTTCCAGGTCCAAAGGCTATTGCTGATTTTTGAAAATTTATGATTTGACCTGTGGCCTCCTCATAGACTTTTAATAACCTTTGTAGCTCCGCAAATTCCTCTTTTCTCGTTTTCAGAAACAGTAAGCTGTCATCTGCAAAAAATAAGTGAGAAATGGTCGGTGCCGTTCTTGCAATTCTCAGACCTGAAATATTTTGAGAGATCTCAGCCTTTGTTAAGAGGCTGGATAAACCTTCAGCACACATGAGAAATAAATAAGGTGAAAGGGGGTCGCCCTGCCTAAGCCCTCGAGTGGATCTAAAAGTTTCAGTACATGTGCCATTGATAGGTATAGAAAACGAGACAGATTCAACACACATTCTAATCTTTTTAATCCAGGATGTATTAAAACCCATTTTTTCCATGATGCGATATAGAAACGACCACTCCATTCTGTCATATGCTTTGCTCATGTCTAATTTGATGGAAGCATAACTGTTTTTCTTGGATTTTGAACCTTTTATGAAATGTAAGCATTCATATCCAACAATAATATTATCAGCTATAATTCTACCTGGGACAAAAGCACTTTGATTATCAGATATAATAGAATTAAGGATCGATTTCAATCTATTAGCAATCACTTTAGCAATAATTTTATAACAAACATTGCATAAACTGATAGGGCGGTAATCGTTCACCGTGCTTGGGTTTTTCATCTTTGGGATTAGGACTATCGTTGTGGCATTGATCTGTTCTGGGATATCTCCCTCATTAAGACACTTAAGGCATGTACTGATAACCTGATCTCCAACAACATTCCAGTATCTTTGATAAAAAAGAGCTGGTAAACCATCTGGTCCAGGAGCTTTTGTTGGATGCATCTGCTTGAGGGCCTCCTCCACTTCTGACGCTGTAAAGACCCGGTCTAGATGTGCATTCATTGTGTCTGTTACCCTAGCTGTGGTAGCTTGGATTGTTTCGTCCATTGCTTGCACATTTAAAGGAGAGGCTTTAAACAGTTCAGTATAATAATGAAGGAAAAGACGTTCGATATCTTCCCTGTTTTCGTAGCTGTTTCCATTGAAATCAACTATCTTTTGAATTTTATTTCTCTGACGACGTAGACTAGCCTTAGAGTGGAACCATTTTGTATTTCGATCCCCCACTTCAGCCAGTCCTCTCTAGATCGTTGCTTCCAGTAGATTTCTTCCTCCAGCAGGATATGGTCTAAGCGTTTTTCTTCCATCCTGAGGCTTGCCATGGACCTCTCCTCCAGCCTATCTTTCGTCAAAGCTTCTATTCGCCTTTTTGTTTCTTCAATTCGGGACTTGAATTTTCCTGTTTTATTTCTGCCCCACCTTTTGAGCTCCTCAGTCACATTTCTGATACGAGTAAGTAGATTCGCAGGGGAATTGTCACCTGCTCCTTTATTCCACCCATATTGGATTTTGATGGAACAATCTTCATGAAGGGTCCAAGCCTCTTCAAATCTAAAATGAGAGAGCTTCTTGTGGGCCGATACTCTCTGGTCTTGGATGCAAAGTTCAATGACCCTATGATCTGAGGACAAATAGCCAAGATGATTAATAATAACAGAATTATATAAAGCCAAGAAATCTACATTACCGATACATCTGTCCAACCGCTTTCGAATACAAGCTTGTCCAGGTTGATTATTTAGCCATGTGAAGCGATTGCCTGAAAATCCAAAATCTTTCAATGCACAATCGTTTATGACGTTCAGAAAATTTTGGCTCTCCTTACTATCATATACTCTCCCTCCCTCTTTTTCATTTTCTTTAGTAATGGAATTGAAATCTCCCATTACCACCCAAGCCTGGTGGGGGAAATCAAAAAGGCGTCGGAGTAATGTCCAAGATAAATGACGATTTTCCGTCTTAGGTTCCCCATAGAAACCTGTAAACCTGAATGATTTTCCATCATGAACAATAATAGTATCAATGTGCACTTTAGAGTAAGAAACAATATTAAGATTAATAGAAGAGTGCCAAAACAAAGCTAAACCACCACTAAGACCAGTACAATCCACAACAAAAACATTCTGAAATAAAAGAGCATTCTTAAGAGAGACCATTCGCCTTTGTTTCGCCTTGGTTTCCATCAAGAACACGATTTGGGGATTTTTTTCTTGCACCAAATTTTTTAGTGCTCGAAATGTTCGAGGGTTCCCCGCCCCCCGAGCATTCCAACTAAATATTTTCATGGCTCCCGGCGGGCCTGATTAACAGGCTCCGCCGATATCATCGTATCAATATTTGATGTGCTACATTTGATCTTTTTTCCTTCGCTGTCTGCTGGACAAGGCTCATCTGCCTCTCTTTTCTTGCCAATGAAACTCGTGAGAGTGTGTAATTTGGAATTTTTTGATATACTTTGGCCTCCTTTCCTGTGCACTCTCTTCCATATCTTTAAAATTTTCCTCTCCATATTCTGCCCATCCACTTGTTCGACCATAGCCTCATCTGTTTGGCCTAGATTTTGCATATGACCGTCGTTGGAATCATTTGGGCTGATTTGCTGTTGTGTCCGATTTTTCCCTTTCTTATATCGAGAAATGCTAAGCTGGGGACTGTTACTGTCCACATCCATAAAATTTTGTGCATTAGAGGGCCCAGATGGATAGACCTTGTTTCCATGGCCTTCATTCCCTTCATTCCCTGGCAAATTTTTTTCCACTTGGCCCAAGATATTGTTAGGCCCAAATTTTTTATTCTGAAATTTTCCTTCAATTGTGTTGTCTGGGTCAATCAAGGATTTTGCATCTCTCCCATCCATTTTTGGAAAGAGATTTTTAGCCATTAACTCATCGTGATTTTTGGGTTCCTTGATGCGTGATTCCTTTCCTTCTTCGTCCCTCGCGTCCGTTTCTAGAAATAAATCAGCATTAATTATTTGTTTACCGTTCCTTATTGATCCCGTTTCCGTGATTTCCGTCGGCAGCTTTGATTGTGGTGGCTGGTCGGTTTCAGGCTTGTTCCGACGGTAGGATTCCGGTGGTTGCCGCACTTGAAGGTTATATGTTTTGTTGCTATGTTTTAATTATAATTTATATCAATAAATTCAAATTATATATTAGATAACATGAGTTCCATCTCAAAATCAATTGGCAATGAGAGGAGTAGTCCATGTGTCTTATAAATTGGGAGGTCTCCACTTATCTTTTCAACGTAGGATCCTCAACATTATATCCAAAATTTGCAAAATTTATTACACACGATAAATATTTTTAAGTCTAAATAATAGAAAATTCTGAAAGTAAATATTTTTAAGATTAAACTATGTTTTATTATCGTTCAGAAATCCAAACAAAAGTAAACCATTCTAAAAAAAATAAAAAAAAAAAATAGGATGGTTGTTTGGTATTTTCTATAGAGAACTTTCCGTGGGTGACAAGTAATAATTATATAATTGTAAATATAGCACAATGTAAAAAAAATTGCAAATATAGTAAAATCTATCAGAGTATATTACTGATAGACACTGATAGACTCTGGTTAATTAGAATCTATCTGATAGACTTCGATTATCAGAGTTTATCACTGATAGACTTTGATTAACCAAAATCTATCAGTCTACTGATAAACTCCGATTATTCAGAGTCTACAGTGTCTATCGCTGATAGACTCTGGTTAATCGAAATCTATCGGTGACTATCATTGATATCAATTAACCAGAGTCTATCAGCGATAGACATTGATATACTTTGAATAATCGGAGTCAATCAGTGATAGACACAGATAGAATCTGACCAACATTTTGGTCTTATACAATTAATTTTGCTATATATGCAATTAGTTTGCAACTGTGCTATATTTGCTATTAATTTGGTCCAATTTGCCATCTATGCAACTGTCCCTTTTCTAAAAGCCATTTTTAATTTAGCTTAAACTATCATTTTGGTCCTTGGTTTTTAACACTCTTATTCCATTTTCATCTATTTACTTTCAAATGTCCAATTATTTTGGTCGACTTTGAGACTCGTTTCATATTTTGGGCCTTGCTTGATAACCATTCAATTTTTTGCTTTTGATTTTTGAAAAGTAGGCTTGCTTTCTCCTACTTTTTTTTACCATGATTTTCATTTAGGAAAAATACCTTTTTGGTCCCTGAGTTTTGAGGAATATGTGCATTTGGTCTCTGAGTTTTCAAAATAGACTATACTTATCAAGTTTCTCATAGTGTTCCATGAACTCTTCAACGTTCATGCTTTCAGTATCGATCTTCTTCGGGTTCTTTTCTGTGAGGACATAGGCCACCTTGAGAAGATTAAGGCAGAACAACACTTTTCCTATCCATCTCTTAAAGTGTGCTCCCTTAAATCGAAAGGGCTTGTTGAGATCTCCAACATATTCATTTGGCTTCTCAATAGTAGACTCCATGTTTGACTCTCCTTAAAATTGTTGGGGGAAATTACAAATAACAGAGGAAATGGAGAAAATATTGAGAAAAACAGACAAAGTAAACAATTAGATTGAGGCGCAGGTATCTCGCTCTCTTTAAGGAGATTCAAGCCCTCTGCGGTGTATAATTCTTTATCAATCACCGGTGCAGCAGGTATTCTCAAGCTTGTCCCCTCCAGGATACAACAACTCAACTGAAACGTTGTGTAGCTCAAACCACTATGCACTAAGAGGTTGAGCTCAAAGCTCCACAACAAAGAACACCCCTCTTTTGGCCAATTACTTTTAAAAGAGCAAATGAGAGAAATATGAGAAAGTAAAGAAAAGAAGATAGGAATTGTTGTGTTTCTTGTTGTGTTTTTTGAAAGTGTGGTAAGAGAGCTATTTATATAAGAATTTTAGATCTAGGAATTTAATACAAAAAAGAGTAACCAAAATTCAAATTAAAAACTTCTCTTACCAAATACGTTTTCACTCTTTTAAAAAAGAGAAAACCACCAAAATTTAACATCCAAGAATAAAAATCATATTTAAATTACAATTAAATATTAAAATGTTACAACACACCTGCTTTGACGACCATGAAAGATGTGAAGAACAATAACGAGACAGCATTGCATGTGTTGGCCAGAAAACCATCAACATTAATATATCGTAGAAAACAACTGAGTATCTGGAAGAAGTGCATTTACTCTTGTTAGTTTTTCCAAATTATCCATACCCACCTTCCCACCTTCAATTTAATTTCTTTCCTATTTGTTATATATATGTATACACATATATATACAATTTTTATTAGGGGCAGTTGCATAGATGGCAAATTGGACCAGTTTAAGCCAAAAAGTTGTCGTCATATTCTATCTATTTGGCAATGAGTGGGGTAACCCTTGTAGCTTATAAATTGTGAGGTCTCCACTATTCTTTTCAATGTGGGATCCCCAACATGCCCCCTCAAGATGGTGCCTCTTTGGGTTCACCATTCTTAGATCGGATTCCAATTTTTTTTTTGGACCGAATACCCGTTTGGGTTTTATGGGCTATGATACCATATTATATAACATGGGCTTCCATCTCAAAACCAATTGGCAATGAGTGGGGTGACTCTTGTAGTTTATAAATTGTGAGGTCTCCACTATTCTTTTCAATGTGGGATTCTCAACACTATCAGCAGACTAATAGATTCTGATTAATCAGAGTCTATCGCTGATAAACTCTGATAATCGAAGTCTATTAGATAAATTCTAATTAACCAGAGTCTATCAATAATATACTCTGAGAGATTTTGCTATATTTGCAATTTTGTTTACACTGTGCTATATTTACAATTATATAATTCTTATTTGCCATCCCTGCAAATTCTCTTTTTATTAAACGACCTCGCTTCATGTTTTGATTGCAGGTATCAATTGGATCATCATAGGGATCTTCAGTAAAGTTGTGATCAAGACATTTGCCCATGATTTGGTTTTTTCATTATGGATAAACGTTCTAACAAGTTTGTCAGAAAAGGAGATGTTGGAGTTCATTAAGTTTCCTACAAGATTATTGCATGATGCTGCAAGAGCAGGAAACGTGGAGTTTTTAATTGAGCTTATTAGCTTTTACCCAGATATTGGTTCTTATCGATCCTAACTTCACGCTATGCAGAAGAGGATTTCTTGCATTCATTGCCATCCAAATTGCTCTTGGGACTTGCATCACTTTTCATCTCTATTGTGTGTATGGTGGTGGCTTTCAGTGCAATCTTCTTCATTCTCTACCATGACACCAATATTCGGGTTCCAATAGTGGTTGCTGCAATGGCCATTATTCCAATTACTTGTTTTTGTCTGCTACAGTTTAAACTGTGGGCGGATACATTTCACAACACTTACTTGTCTAGCTTTCTTTTCAAGCCCCGTCGACGTAAATTGTTCTCAACACCTCTCCCCATTGATTGGTATCGTGAACTTGAGAAAGAAGAAAATTAGGTATATATGTTTGGTGTGTGATCGGAAAATATAAATTTGAAAATAAGGGATTAAGTCAAAAAATAGTGTTGTTTTTTTTACATTTTCAGTATTTCTTGT

mRNA sequence

TATGACGTTTTTCCTTTAAAAACTTTTCACTATTTAACCGTGGTTCTTCCTCGACTGAATTGAGAACATGAGTTGAAACAAAAACATGGTTCCTTGGAAGAATCAAAATTTGAGAACATGGAGAAGGAGGAGAAGAATAATATTGAAACTGAAACGTATGGAAAAGTCCCAACATCAGACTCAGAATCAACATGGCCAAGCATCTGTCTCAGATCCCAGAATTTGCAGCAATTTCATTGGCCAATCATCTTTATTTCGATTGGCAGATGAGTTTCCCAATATTGTTGGAGTAGAAGAAGAGATTGTTGTTGGAGACAACCTCACTGTTCCTCCGCCGCCTACGGCCAATGACGGCCATTTAGAAGCGGAGAGCCATACAATTGACGTCGCAGGATCCTCGGATGATGAACTTAATCCAGTTGCAAACCCCATAACAGGTATCAATTGGATCATCATAGGGATCTTCAGTAAAGTTGTGATCAAGACATTTGCCCATGATTTGGTTTTTTCATTATGGATAAACGTTCTAACAAGTTTGTCAGAAAAGGAGATGTTGGAGTTCATTAAGTTTCCTACAAGATTATTGCATGATGCTGCAAGAGCAGGAAACGTGGAGTTTTTAATTGAGCTTATTAGCTTTTACCCAGATATTGGTTCTTATCGATCCTAACTTCACGCTATGCAGAAGAGGATTTCTTGCATTCATTGCCATCCAAATTGCTCTTGGGACTTGCATCACTTTTCATCTCTATTGTGTGTATGGTGGTGGCTTTCAGTGCAATCTTCTTCATTCTCTACCATGACACCAATATTCGGGTTCCAATAGTGGTTGCTGCAATGGCCATTATTCCAATTACTTGTTTTTGTCTGCTACAGTTTAAACTGTGGGCGGATACATTTCACAACACTTACTTGTCTAGCTTTCTTTTCAAGCCCCGTCGACGTAAATTGTTCTCAACACCTCTCCCCATTGATTGGTATCGTGAACTTGAGAAAGAAGAAAATTAGGTATATATGTTTGGTGTGTGATCGGAAAATATAAATTTGAAAATAAGGGATTAAGTCAAAAAATAGTGTTGTTTTTTTTACATTTTCAGTATTTCTTGT

Coding sequence (CDS)

ATGGTTCCTTGGAAGAATCAAAATTTGAGAACATGGAGAAGGAGGAGAAGAATAATATTGAAACTGAAACGTATGGAAAAGTCCCAACATCAGACTCAGAATCAACATGGCCAAGCATCTGTCTCAGATCCCAGAATTTGCAGCAATTTCATTGGCCAATCATCTTTATTTCGATTGGCAGATGAGTTTCCCAATATTGTTGGAGTAGAAGAAGAGATTGTTGTTGGAGACAACCTCACTGTTCCTCCGCCGCCTACGGCCAATGACGGCCATTTAGAAGCGGAGAGCCATACAATTGACGTCGCAGGATCCTCGGATGATGAACTTAATCCAGTTGCAAACCCCATAACAGGTATCAATTGGATCATCATAGGGATCTTCAGTAAAGTTGTGATCAAGACATTTGCCCATGATTTGGTTTTTTCATTATGGATAAACGTTCTAACAAGTTTGTCAGAAAAGGAGATGTTGGAGTTCATTAAGTTTCCTACAAGATTATTGCATGATGCTGCAAGAGCAGGAAACGTGGAGTTTTTAATTGAGCTTATTAGCTTTTACCCAGATATTGGTTCTTATCGATCCTAA

Protein sequence

MVPWKNQNLRTWRRRRRIILKLKRMEKSQHQTQNQHGQASVSDPRICSNFIGQSSLFRLADEFPNIVGVEEEIVVGDNLTVPPPPTANDGHLEAESHTIDVAGSSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFPTRLLHDAARAGNVEFLIELISFYPDIGSYRS
Homology
[Close]
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match: A0A5A7UM89 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002310 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 307 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 366

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 367 TILLHDAARAGNVEFLILLIQSYPNI 390

[Close]
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match: A0A5D3BJX5 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005280 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 307 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 366

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 367 TILLHDAARAGNVEFLILLIQSYPNI 390

[Close]
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match: A0A1S3B1H2 (ankyrin repeat-containing protein At5g02620-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484946 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 352 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 411

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 412 TILLHDAARAGNVEFLILLIQSYPNI 435

[Close]
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match: A0A1S3B217 (ankyrin repeat-containing protein At5g02620-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484946 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 363 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 422

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 423 TILLHDAARAGNVEFLILLIQSYPNI 446

[Close]
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match: A0A6J1K0Y7 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC111490094 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 125 GIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFPTRLLHDAARAGNVEFLIELIS 184
           GI+ K V+KT AH LV SLW +VL  L EK+ML+FIK PT LLHDAARAGNVEFLI LI 
Sbjct: 324 GIYEKEVMKTLAHQLVRSLWGHVLRELPEKKMLKFIKHPTILLHDAARAGNVEFLILLIR 383

Query: 185 FYPDI 190
            YP+I
Sbjct: 384 SYPNI 388

[Close]
BLAST of Lcy12g004410 vs. NCBI nr
Match: XP_008440571.1 (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 363 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 422

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 423 TILLHDAARAGNVEFLILLIQSYPNI 446

[Close]
BLAST of Lcy12g004410 vs. NCBI nr
Match: KAA0055386.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 307 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 366

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 367 TILLHDAARAGNVEFLILLIQSYPNI 390

[Close]
BLAST of Lcy12g004410 vs. NCBI nr
Match: XP_008440580.1 (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 352 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 411

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 412 TILLHDAARAGNVEFLILLIQSYPNI 435

[Close]
BLAST of Lcy12g004410 vs. NCBI nr
Match: TYJ99314.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 104 SSDDELNPVANPITGINWIIIGIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFP 163
           SS  E++    PI   +W    I+ K V+KT AH LV SLW +VL  L EK+ML+FIK+P
Sbjct: 307 SSKSEISIWKKPIN--SWTKGIIYGKEVMKTLAHQLVKSLWGHVLRELPEKKMLKFIKYP 366

Query: 164 TRLLHDAARAGNVEFLIELISFYPDI 190
           T LLHDAARAGNVEFLI LI  YP+I
Sbjct: 367 TILLHDAARAGNVEFLILLIQSYPNI 390

[Close]
BLAST of Lcy12g004410 vs. NCBI nr
Match: XP_022955181.1 (ankyrin repeat-containing protein NPR4-like [Cucurbita moschata])

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-13
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 125 GIFSKVVIKTFAHDLVFSLWINVLTSLSEKEMLEFIKFPTRLLHDAARAGNVEFLIELIS 184
           GI+ K V+KT AH LV SLW +VL  L EK+ML+FIK PT LLHDAARAGNVEFLI LI 
Sbjct: 322 GIYEKEVMKTLAHQLVRSLWGHVLRELPEKKMLKFIKHPTILLHDAARAGNVEFLILLIR 381

Query: 185 FYPDI 190
            YP+I
Sbjct: 382 SYPNI 386

[Close]
BLAST of Lcy12g004410 vs. TAIR 10
Match: AT5G35810.1 (Ankyrin repeat family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0 

Query: 132 IKTFAHDLVFSLWINVLTSLSEKEMLEFIKFPTRLLHDAARAGNVEFLIELISFYPDI 190
           ++T AH +V  LW  V+  L  +E+ +F+     LL DAA++GN+E L+ LI  YPD+
Sbjct: 1   MRTLAHMVVEELWSFVI-KLPVEEISQFVGSSPMLLFDAAQSGNLELLLILIRSYPDL 57

The following BLAST results are available for this feature:
BLAST of Lcy12g004410 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy12g004410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UM895.4e-1458.14Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BJX55.4e-1458.14Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3B1H25.4e-1458.14ankyrin repeat-containing protein At5g02620-like isoform X2 OS=Cucumis melo OX=3... [more]
A0A1S3B2175.4e-1458.14ankyrin repeat-containing protein At5g02620-like isoform X1 OS=Cucumis melo OX=3... [more]
A0A6J1K0Y71.2e-1369.23ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of Lcy12g004410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440571.11.1e-1358.14PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ... [more]
KAA0055386.11.1e-1358.14ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008440580.11.1e-1358.14PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis ... [more]
TYJ99314.11.1e-1358.14ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
XP_022955181.12.5e-1369.23ankyrin repeat-containing protein NPR4-like [Cucurbita moschata][more]
BLAST of Lcy12g004410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G35810.11.0e-0441.38Ankyrin repeat family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g004410.1Lcy12g004410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane