Lcy12g003520 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g003520
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CLP protease regulatory subunit CLPX3, mitochondrial-like
Location	Chr12: 10737516 .. 10749143 (+)
RNA-Seq Expression	Lcy12g003520
Synteny	Lcy12g003520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAACTGAAATCGAGCGTCGATGAGATGGGAGTTTCTCCTTGAAACTCTCCCAGTTTTATCTTCCTCGTTCACTCCTCTCCCTGTTTTCTTTCCCACATTCCTTCTCATCCTCACAATCTTAAAATATTCCACACCTTTCTCTCTATCAATAAATTAACAATCTTGTAGCGAAGTTTGTACTCTTCTCATTTTGGGTGCACTTTTTCCTCTTTTTGTCCCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTCTCTAGATTTAGAGCTTGTACTAAATTGGATTTCATCTGGGTTCTTGACGAACTATCTTATTTCTTTGTCTGTTTGAGTTATATACAAATTTATACATGTCTGGCAGTGGTGGAAGTGCGATCTTCAAATGGAAGAAATTGAAGGCATTAAGGATGCTCTGTTTCTCGAATCACAGTCACCGTTTGACCCAGATTTGCCCCATTTCGACCCATCTCAATTATCTTCACGTTTCGAGTCATCGCCGGCGGGAATCGTTCATCGGCGTTCAGGAGCGGTACAAATGGGACAACGGCGGGTCCGGTTCCGATGATTTCCATTCACAGTCCAACAACACAAGTACTCCAATCCGTAAGATTCGGGCCGAAGCCAATTGCCCACGTTGCTCTAAGCATATGGATATCCTCTTCTCTAACCGTCATTTCCCAACCCTCAATCCCCCTTCTTCCTCTTCTTGCGATGCTCCTCCAAATCGAAAAGAAGCTTACGAGGCTGTTAATTTGTGCCCCAATTGCAAAACCGCTTACTATTTCCGCCCTTACAAGATCGCTCCTCTACAGGGCAGCTTCATCGAGATCGGCAATCTGAATTCCAAACCGAAGAATTCCTCAGAAAGAAGGATCACTACCAAAGATGGTAAAGGTAATGCCATCGCCGGTTCTCCTGTTGAAAATTATGTGAATAGTAGGCTGAGAGTCTCGTTTTTCGAAACTGCGAGATCGTATGGTGGAGAACCGCCTGAGAATTGGCCTCCTGGACCACCTCCCGCTAATGGGTTGGCGGTGCATTCTCCTCCAGGTCCGCCATTTGCGCCCGGTGTGAACTTCATTCGTGCTACAGGTCCTGGTGGAAGCACCTCAGGTGCTGGTGGAAATGGCGCTGGTGATGGAAAGAAGAGTGAGTGGGGAGGATCGAATTTGGGGAAGGATCTACCCACTCCAAAAGAGATTTGCAAGGGCTTGGACAAATTTGTTATTGGCCAAGAGAAAGCCAAGAAGGTCTGCATCCGCTTTTTCAGTGATCTGATGAAATTATCATTAGTATGCATTCCATTGTGGCTTTTCTGCATAAGAATGGACATATCTCGTTTAGAGGCTTTTAAGTGATATTGATTAAGTGAGAAGTGATATCATCATGCGCTGATTTATTGCATTATTATTTTATGAACTATTGTAAAATTTCAAAGACAGCTTTCTTTATCTTTCTCAGGTACTCTCTGTGGCTGTACATAACCATTACAAACGAATATATCATGCTTCCTTGAAAAAGAGGTTAGTTTTTCTTATAACATTTGCATCAAAATTGTTATTTGGTAAAAGTATTTCCCTTCAGTCCATGTCCATGAGTAACTAGCTGTTACTGATATTGCGGATTCATGTAGCAGGTCAGGAACTGAATCAGGAAGTCAAGATATGATAGATGATGATGATAACGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGCTCTGGTATGAACCTCTTACACTTATCGAGTTCCAATGTACTGACTCTGGTTGTCATTGGCATGATATTAAAGCATCCACGATGTATCAGATTCCCATTCTAATTTGCAAATTGTAAAATAGGGAAGACATTACTTGCAAAGACTTTGGCTCGATTTGTGAATGTGCCTTTTGTCATTGCTGATGCTACAACTTTAACACAGGTTAATTTCTTTCTTTCTTTCTTTTTTTTCCCCCTCTGAATGATTTGTGAGAAATGGTAAAATATGATGTTCATATGTTCACCATGAATTTGTGGCACGTTCTAACCATCTTCTCATGCCCTTTATCCTTTGTGAATAAATACACGGTCACCTATTTATGACTTCCTTGAGTTGGTAATTTCTCAGTGAATTCATTTCTTCTTGAGAACTGAACTTGAGCCTTGCCACACCGATAGAAATCCATAGTTTCTTGGGACTAGAATCTTCACATCATTTTGTAGTTTCGCTGATACGGTATTTTATTTTTTTTGAACCAAGGGGTAGCTCAATTGCAGCATAGCTGTTGGATGGTTGGGTAGGCCTTAGGTTGAAACTCAACAGGGTAAGAGAGCAGCAACTAAGGGTAAAGAATGAGAGAGAGCTTTCATGTCAGATGGAGATACCCTAAGTCCTAAATTTGTGATATTGCTTCTTTCTTGTACACCTACTTAATAATGGGCTGCTTTAAACCATATTTGAAGTTGGAAGTTGTCATTTAAAATTTTTAAGAAACTTTCCTTTTTTATCTCAAAATTATGACCTTTCCAATAACTTTTCTAGATACAGAGTATCGAGTTTTGCTTCCATGGAGAAATCCTTGAGAGCTAGGATTGAGAAGTTTCCCAATGTTTCTTTTATGAATGATAAAATACTGCTTTGAACCCAAAGAAGAGTACTAAATTAGTAACTAATGTGTGAAAGATGTCTGACTAGAACTAGAAGGAAAGTTGTGGACAATGGATATAAACCACTCACTATTGTATATTTATTTTCTTTTGTAGCCCTCACTGTGATCGGGTAGAAGATTATAATTATCTATGGAATTAGTTAGCCCTAACCCACATACTGGAAGTAGACTATGTGCAGAAATTGAATGAGAGGGCAATGAGAACTGTATGGTTAAAGTGTTGGGTACTGTGGCTCAAATGGCATCAATAAACTTTTCAGTATTAATCCACTTCTCTTCACAATTTATGGGCTTCTAATTCTAATTCAATTTGATGTGCGCTGGTCTTCTTGTGAAGAGATATGTCTTGATTGTTGCATGAGGCGGCTAAAACGAGAAGATTGTTTTGGAATTGACTGTTTGTTTGGAGGAAGAGAAGACACATATCAATTTCAATAGATTCACTGTTTACCCATAAAAAAGTTTCAATATATGCACTCATTGTTAGAAAACAAAGGAGACCTTCAATCGCTTTTTACCCCATAGCCCTTTCTTGGAGGTTATGGGAACACTTGTGAGCTCTTCTGCTTTCTTCCTTCCTTCCGTTGGTAGAAGGTCTCCTATACCTCTACTTTTTCCTACCCTACATAGAAGCAAACCTAAAATCCTTTGGGAGATGTACGTGCTACTACTCTGTGTGACTGGTATATGAAATGTCAGGAACTATGTGCATTTTTTCTTATGTTAGCGTTATTTTAGGGATTTAATTCAAATCTAATAGTTAAACTATATTAAATTTCTTTTCTCTCTTAAAATGTAAATACAAATACGAAAATGTAAAGACATTAAAGGCTACTTCATAGTTTCTTTGAGAAACACTTGTGCCCTTGTGGGATTTGTAGTTTTCAGTCATCCTTTTAAAGGTGCTAAAGCCATGTTGTGGAGTCATATTACCAGGGCCTTCCTTTGGGTTCTCTGGAAGGAAAGAAACCAAAGAGCTTTTTTTTGGACAAGGGGCAACCCTTCAAGAGCACTTTGATCTTGCTACTTATTATGTTGTTTCATAGTGTAAATCTTCCAATCTCTTTGCTTCTTACCATTACAGTTCCCTTTTAAGCAATTGGGAAAGCCTTATGTAATCCTCATGGATTCCATATCCCTTTTGTAAATTTCATACATCAATGAAATTGTTTCTTATAAAAAAATAGCCATCTTTTCTATAATAAAGCTTTTCATTAAAGGGTCCCTTGTCCTTTTGTTTGTTTTTCTCAAAAGGGAGGTGGGACAATAAATGTAGAAGCAATCCTTTAATTAGGTTGTAGAGAACCAGAAGACATTGCTTTAATTTGCTTCATTTTTCTTGTGCTCCAAGCCTCCAACACTAATTTGAATTATTAATTTTTATTCAACAAGACAATATTAGCTTCTTCTCAAAATAATAAAGGTTTGTTATTGAATTAAGAGAGGATGCTCTTACTTTTTGCAGGCTGGTTATGTTGGAGAAGACGTTGAATCAATTTTGCACAAGCTGCTTGCTGTAAGCTTCATGTTTAATTTCCTTCAAGAAAGAAAAAAAAAAGGAATTCGTGTTTAACAATTTCCTTCATAGCTAGCTGATTTTATTGAGTCGGGGTTAGATTTTTATTTGTCATTCATCTCTGCCTTGTATGGTAGTTTTATTTATTTCATATTTCTGGTACAATGATGGGTTTTTCTTTCTGTTTTTTTATATTTTAAAAAATTAGATTTGTTGTTCAACTTACCATAGAATGTAAATTAATATGATGCCTGACAATTAACTGATGAAAGAGTGCTAGTTTCTAAGAAGGGTGTTTATTAGCTCAGATAACTTTGAGCTCAAGAAATTGTTCTGTTCCTGTAAAGATAAAGAAACTGAAAAATTAGCCGAACCCTCCTTTCATCTCATTCTTCTGGCAGAGAGCTGGTATGGTGTAGACGTGTAGTAATGAAGATAATTCGGCTCAACAAACTGAGAAAATGTTATTGTGGAGAAAAAAGTTTTAGACCCAAGTGGCACCTCTATTTCCAGTTAAATAGGAAACTACCAATAATTTAGATTTTTGCATCAGCTGGCTGAAAATTTGGCAAATATTTGCTTTGCTTAAGTCAATCTCGCGCCTTTATCAATGTTGCTTTACAATTGGTTAAGTGTTTCAGTGCTCTTGATTTCAATGCTGGTTAAAATTCAATGTCAATGCATTTTTTTCTTTCACAAGATCATATGCCTTTTCTCATATACAGAAATAGATTTATGTCATTTCCTCGCCTTTTTTGTTAAAACTGATTGAATAACTTGATAACAGTCTCAATGCAAGACATCTGGTTCTTACTTATCTATTCTCTCTCCCCGTTGAACTGTCAGTTTACTTTATAATTGTCCAGATCTTGCCTCTTAACCTGTGAGCAGCTAATATTGATGCACATTTTATATTGATTTAGGCAGCAGAATTCAATGTACAAGCAGCTCAACAAGGGATGATTTACATTGATGAAGTTGACAAGATAACGAAGAAGGTTTTCATTTCTTCGTTTAATCAATCTCCTTTCTTTTTAGTGATCTACTATATCAACGTAAACCTTATTAATTGGTATTCTTTTCCTCAGGCTGAGAGTCTAAATATTAGCAGAGATGTTTCTGGTGAGGGTGTTCAACAGGCATTATTGAAAATGCTAGAAGGAACCGTGAGTCAACAAAACTTTCTCACTTCCAATGCATTGCCCTTCCCAATTTAACGTGTTGAAGAAAAAATTGTTATGCCATTTCGATTGTCAATTTCTTTGTTCTCTTTTGAGTACTTCATCTTTTCTTATTGGCGTTGGTTAACTAATTTATGCACAATTTAACTGTCGACCCTTATCGTAATATGCCCATACATTGGCTTATATGTAAGAGTTTTTATATACCGGTTTACATGTAATGTACTAAATTATTTCTCATCTTTCTGTTCATAGAAATTCTCTATGAGTAGATTAAACCTGTTGCAGTTGCCTTCTTATAGGAGCTTAATTAAACTGTGTAATCTTCTATAGAACACATGAGGTTGAGTATATCTTATTTTTTCACATTGTTTTTTTTTTTTTTAATTAATTTTCAAATTTTGTTATTATTACTTCATGTAAGAATTTTACTATTGTTACAGTAAGTAAAGTGCTAACTATAACTTCGAACTTGATTCTTTGTAGCTATGAAGCACGGACACGCCAAAATGGGGGGAGGATCTGTGTCGGACACGCGTCGGACACGGATTCGTCCGGACACGCTCCGGACACGTGTCCGACACGCAATTTTGCGTGTCCTATTTTTTTTTTTTTTTAATTTCGGACACGCGGGGACACGGCTGGATACGCCCACGGACACGCTCTGGAGTGAGAGAGAGAGAGAGGAAAAAAGAGAGAGAGAGAGAACAAAAACCTCATTGCCGCCGCTTGAGAGAGAGAGAACAAAAACCTCATTGCCGCCGCTTGCCACCTCTGGTTCAGCTAGGTTTTTCTTCTTTTTTATCTTTTAAACCAAGTTAACCTAGATAAAAGGCCCAACCCAATAATGCGACCTCTGGTTCAGCTAGGTTTTTCTTCTTTTTTATCTTTTAAACCAAGTTAACCTAGATAAAAGGCCCAGCCCAATAAACCCTCATTTTTAAAGTTAAGATAAAAGCCCCAGCCCAATAAAAAACTGTTTTTAAATTAAAAAAAATGAATGATTATTAAATTACTCAGAAAATTTTATATATATACTATTTTTTTAAAAAAAAAATCTATATATATACTATTTTTTTAAAATATATATATAAAACAACGTATCTTCAACGTATCCGTATCTTAGTTTTTTAGAATTTGACTTATCGCCGTGTCCCGTGTCCGTGTCCGTGTCCGTGCTTCTTAGCTTTGTAGTTATTGTATGAAGTTTTCTACCCCGAAGCTTTTGAAATTAATAGATCTGTCAACTTAATCAGTTAAATGGAAGGGAAATAGTGAAAACTACATGGTCTTTGTTTAGAAAATTGAAGTGATAATGTGGTTATTTCTATTTGATTTGGGTTGTTAGACCAGTTCTAAAAATTCAAGGGTATAAAACGTAAATTAGAAATGCATGGTATCAAGCTATAATCAATCCATGAGTATAAAGCGGAATTTGCATTTTACCTTTTACAAAGATTGGATTACTTGGAAACTTGAAGTTAGGATTGGAACATGCACCTTACTTCTCTAGTAGGTGTAAGTAAATGTAGCAAACATGAGAGAAGCTCGATGTGTAGGTAAATAAAGTGTAGAGGAGAGGTATTGGATGATGGGTTGTAGGCGCCCTCCTTTCCTTCCTCCCTCCCACTTTCTCTCTTGCTCTCTTTCTTTTACACACTTCTCTTCAATAATGTATGCCTTAGTTGAAAGATGGTTTTTAGATGCTTCTGGAGTTGTTTCGTTGAGGGGAAAACTTTTAGTGTGATATTGATGAACAGCACAAAGGCAAGGGTGTAGCTCACGTGGCTATCAAGTAATGTGTTCTCCTTTACTTTAAGCTTTCATTCAATAGATTGGGGGTTGAACTGATTCAGAGTTATCCTTGCCTGTTCAAAGTCAGATGGCTTCTTTAGGCAAAGTCATTTTGATGACCATCTCATTTGGATTGAAACGACACTACACGTTTGCATCAATTTTTAAGTTAGATGGCAATGGGAAGAAGTCTTATGTAATGGTTCCAGAATGTAGAAACCAAAACAGTTGGAAAGAGTTTATAAGGACTCAAGGACGTTAGAAGATTTCCAAGACTCTGAGTCTTTCTAGGGAACCACTGGAAAATAAGTAGTCAAGCGAGATTGTGAATGTGAAAGGACTTTTGGTGCCAGAACTTCTATGACAAGGCATTATTGTGGTGTGTTGAGGACCACCCGTTTTCTATGCAACTGAAAATAATGGGTGACAATGCAGGATTTGGAGCTTTAATTGAACCTTGGGTTCCTTATGTCATGAGAGGGCTAGTCCAGTTTCCTCCCTGGGGGCATAGATCAAAATTAGGAACGTCTATTTTTATTCTTTTATTTTTTGAAGAAACTGTAATTTCTTTTGATCAAATGAAGTGTATACAAAAAGGGAAGGAAAAGGCCTTTCAAACCATCTAGGATTAAAGTCATATTTATCTTTTACAACATCCTTTTTGATGGAAGATTTCAACAAATTAATATAGCTTCTTGTTTAGTGGCACTCGGTAGGACTAGGAAAATTGGAGTTTGTTTATGTTGCCATTAAGACTCATATTATCAAATAAGAAAATGTGATCCACAGATCTGTATTAGAATCATTGGAGTAACCAGTCCATGTGGAGGTCCATTAACTTTTCAGGTTTAGATGATTCAATGTTCATTTCTACCTTGTTAGTCTTGTTGATTCTGACCTTTCTGTTATGTAATCTCTGTGATTAATTGTAATTTAATTTCTACAAAATGGAAAAAAGGATATGGATCTAGTTGTACTAGTTTTAGCTTTATACTTTTTCTCCATCCTAAATTCTGCGTATGATTTCTTGTCTAGATAGTAAATGTTCCTGAGAAGGGGGCAAGAAAACATCCTCGGGGTGATAACATTCAGGTAATATATTCCAAAAAAATACTCTCTCAAATTTCCTTTCTTCACTTATATGAAAGTGTTTTAGTGCCTTGCAACATGTACTTCTTCATGATAATGTTTTTAGATGCTATGAGTTTAGTATGGTAATGATGGCATGTGTGTATTCTTTTGGAAACTCTATTTGTTTCCACACATTTGTTTTTCTTCGATATATATTTCTGAAAAAATCTGAAAAAAAATCTGTTTCTATGTCATTGCTTAGAGAGAGCTTTTCACATATTACGTGTATAATATACACACAAAAACTGAGAAGAAAACAGGGAAGAATATGTTAGTATCCAAACTGAGAAGAAAACAGGGAAGAATATGTTAGTATCCAAACTAAGAAAATGCTAATATAAGACTGATTGAAATATATTGCAATGTTAGAGAGAAATTACAATATAACAATAGCCCTTCGAGAGGGCTATTTCTTTCTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTATAAGAAACGATAACATCATTGATGGAGGTACCGATCCAAAACAATACAAAACAACCTAGGGGACAGAGAGATAAGACATCCCTTCTCCCTAAATAAGGATTACAAAAGAACCTTCCCATCTAAATTGATGGAATCAATGGCATAATTACAAAACAAGCTGTGTTGGACACTCCAAAAAGAGCTCGTAAACTGTACATAATCACAAAAAGATGAAATAGAAGATTGCTTATCTAAGAAGACTCGGGAATTTCTTGAAAAATTCATTAAAGACATTCAGAGTTGAATTCTAGTTTCTTTGTTTAGGGTTTTCCTTTTTGTTTTCTCAACATATAATTTTACATATAGAATAGAAGACATTTCATTGATTGCTAGAGGTTTTTCTTTTTGGTTTAAGGTTGGACAGCTAGGCCCATTCACTCTCTGCTGTATTTATATTTTCTTGTGGATGGGAATTACCTTTTTCCAGATATAGTTTCATGGGCATCTTGCCCGCCTTTTGATGTTTTAAACTTATGGTGCATATAACCCCTGTCCGGGGTTTGATGTTGGCTATTTGGAGATGTCATCTCTTAACCGAGTTGAAAAAATCTGCAGATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGGTAGGTTATTCAATATTTTTCCATTAATTCTCACCCTTTTTCAGTGTTCAAGGGTGATTTCTCAATACTAAAATGGTTTATGTTACTGATCAGACGGCAAGATTCTTCTATTGGTTTTGGAGCGCCTGTGCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCTGCAGTTACATCATCATTACTGGAATCAGTGAGAACGAAAGCCCTTTGGATTTGTTAGCATTTGGCATCAAGCCTCTGCGTTGATTTATTTATCTCACATGTTTAATTTATAATCAATGATAGTACTTTATTTTGAGATGAAACCTCACTTTCCTTTATAAAAAAAGTTAGAATCCATTTAAAGTTCATTTAAACGTTCTATTTGGTGCTTTCCAGGTTGAGAGTTCTGATCTTATAGCATATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTTTATCAGCCTTAACTGAGGACCAGCTTGTCCAGGTATTGGTTCATTATTTATTTATTGTTGTTCATCTAGACACTACACCTAAAAGAAAGAATTTTATTAGAGATTGTAACTGCTTAATATCAATAAACTTCATATTTAGTTCACAATTTCGTTTAATTGAAATTTTGTCTGAATTGTCCTCATTGCACATGTATCACCATAAGGTAGTTCTTCGCCTTCATTGCCTGCTGCAATTCCATGTGCTAATAAATGTCGTGCTGCATATATTGCTTGTCAATATGGATGCTGATAGATAGTTCATCTTACAATATAATGTGCCTGTTACGCACAGTTGATTCTCTGCATTTTCTTTCTATAACCGAAATGAGTACGAAAGTTTCCTTGGACCTGTTGTTGACAGGTCCTCACTGAACCGAAGAATGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAGTATTTACTTTCTCAAGCAATCGATTTCTACATTTTCCTACACCGAACCCTCTCCCTTTCCATCTTTGCTATCATTGTGGAGTAGACCCTCTTAGTAGAACCGTCAATCAATTTCCAGGTGAAGCTGCATTATACAGAGAAAGCACTGAGACAGATTGCCCAGAAAGCAATGGCCAAGAATACTGGTGCCAGAGGCTTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTACGAGGTATTGAGGCTAAAATCATCATGTGAATATATAACAATGACCTCCTTGCTTGTATGCCCATTATGACAATCTCATTTTTATTCTCAAATGTTAGGTTCCAGATGTTAAGACTGGAAACGATAGAGTAGATGCCGTTGTTGTTGATGAAGAGTCCGTTGGCTCGCTAAATTCGAGGGGTTGCGGAGGCAAAATTCTCCGTGGGGACGGAGCGTTGGACTGCTATTTGGCTGAGACCATGTTGAAACAATCACTGGTACAATTTCTTTCAAATATGGCTTTCATTTTGGGGCAAATGATGGAGTTGCTATAAACAGAGAAGTCAAATAGACTGTTGCCCTTCAAAAGTTTCAATTCTACCCTTCACCTTTCAGATAGTTTAAAAAATAGGCCCTTAGAATAGTTGGAATTTAGTTTTTTTGTAGCATCTTATGAAACTTACTTGAGGTACAATTTGTTTGTAGGATGATTTGGAGGTGGTTGAATTGCCGGAAGGTGAATCAGAGCTGACATCAAGAGCCGTGAGTATATAGAAAACATCAAGAAGATAACCACGATAGTTCTTATGAAATACTTTTTTTTTCCCTTTTTGGTTTTTGTTTTTTTGGGGAAAAAAATAAAATACATTCATAATATATGGTGTAATTATCCCATTGTAACACCACATAGCTCAGGTTAAGTTCATTGTATTAGGGAAGATGAAAGAAAAAAGCATTCATCATTTAGGCTAACGTCATCTCTGTCTAAATAATATGTAAAATGAAAAAGAAATAGTTGCCTATCCAGATGTCTTTCCATTTATTGAGTAAATTATAAATTTAGTCATTGAATTTACTTTAAACTTTTACTTTTGATTATGATAAGCTTTTGTTGGCTTTATTTGCTTTAATGTTGACGTGGGATGTGACAAAAAAGTGAGTCAATTAAATGAAAAAGTAATATTTGTTTATAATGTCATCTGATATGGTCAAGTCAACCATATTCTCTTATCATTTCCTAAATTTTGATACTTATTGAATCACTTGTATCTTAGAAAATAGTATTTGTCATAAATCATTTGATCATGTTGGATTCTTT

mRNA sequence

TGAGAACTGAAATCGAGCGTCGATGAGATGGGAGTTTCTCCTTGAAACTCTCCCAGTTTTATCTTCCTCGTTCACTCCTCTCCCTGTTTTCTTTCCCACATTCCTTCTCATCCTCACAATCTTAAAATATTCCACACCTTTCTCTCTATCAATAAATTAACAATCTTGTAGCGAAGTTTGTACTCTTCTCATTTTGGGTGCACTTTTTCCTCTTTTTGTCCCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTCTCTAGATTTAGAGCTTGTACTAAATTGGATTTCATCTGGGTTCTTGACGAACTATCTTATTTCTTTGTCTGTTTGAGTTATATACAAATTTATACATGTCTGGCAGTGGTGGAAGTGCGATCTTCAAATGGAAGAAATTGAAGGCATTAAGGATGCTCTGTTTCTCGAATCACAGTCACCGTTTGACCCAGATTTGCCCCATTTCGACCCATCTCAATTATCTTCACGTTTCGAGTCATCGCCGGCGGGAATCGTTCATCGGCGTTCAGGAGCGGTACAAATGGGACAACGGCGGGTCCGGTTCCGATGATTTCCATTCACAGTCCAACAACACAAGTACTCCAATCCGTAAGATTCGGGCCGAAGCCAATTGCCCACGTTGCTCTAAGCATATGGATATCCTCTTCTCTAACCGTCATTTCCCAACCCTCAATCCCCCTTCTTCCTCTTCTTGCGATGCTCCTCCAAATCGAAAAGAAGCTTACGAGGCTGTTAATTTGTGCCCCAATTGCAAAACCGCTTACTATTTCCGCCCTTACAAGATCGCTCCTCTACAGGGCAGCTTCATCGAGATCGGCAATCTGAATTCCAAACCGAAGAATTCCTCAGAAAGAAGGATCACTACCAAAGATGGTAAAGGTAATGCCATCGCCGGTTCTCCTGTTGAAAATTATGTGAATAGTAGGCTGAGAGTCTCGTTTTTCGAAACTGCGAGATCGTATGGTGGAGAACCGCCTGAGAATTGGCCTCCTGGACCACCTCCCGCTAATGGGTTGGCGGTGCATTCTCCTCCAGGTCCGCCATTTGCGCCCGGTGTGAACTTCATTCGTGCTACAGGTCCTGGTGGAAGCACCTCAGGTGCTGGTGGAAATGGCGCTGGTGATGGAAAGAAGAGTGAGTGGGGAGGATCGAATTTGGGGAAGGATCTACCCACTCCAAAAGAGATTTGCAAGGGCTTGGACAAATTTGTTATTGGCCAAGAGAAAGCCAAGAAGGTACTCTCTGTGGCTGTACATAACCATTACAAACGAATATATCATGCTTCCTTGAAAAAGAGGTCAGGAACTGAATCAGGAAGTCAAGATATGATAGATGATGATGATAACGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGCTCTGGGAAGACATTACTTGCAAAGACTTTGGCTCGATTTGTGAATGTGCCTTTTGTCATTGCTGATGCTACAACTTTAACACAGGCTGGTTATGTTGGAGAAGACGTTGAATCAATTTTGCACAAGCTGCTTGCTGCAGCAGAATTCAATGTACAAGCAGCTCAACAAGGGATGATTTACATTGATGAAGTTGACAAGATAACGAAGAAGGCTGAGAGTCTAAATATTAGCAGAGATGTTTCTGGTGAGGGTGTTCAACAGGCATTATTGAAAATGCTAGAAGGAACCATAGTAAATGTTCCTGAGAAGGGGGCAAGAAAACATCCTCGGGGTGATAACATTCAGATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCTATTGGTTTTGGAGCGCCTGTGCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCTGCAGTTACATCATCATTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCATATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTTTATCAGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAATGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTGCATTATACAGAGAAAGCACTGAGACAGATTGCCCAGAAAGCAATGGCCAAGAATACTGGTGCCAGAGGCTTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTACGAGGTTCCAGATGTTAAGACTGGAAACGATAGAGTAGATGCCGTTGTTGTTGATGAAGAGTCCGTTGGCTCGCTAAATTCGAGGGGTTGCGGAGGCAAAATTCTCCGTGGGGACGGAGCGTTGGACTGCTATTTGGCTGAGACCATGTTGAAACAATCACTGGATGATTTGGAGGTGGTTGAATTGCCGGAAGGTGAATCAGAGCTGACATCAAGAGCCGTGAGTATATAGAAAACATCAAGAAGATAACCACGATAGTTCTTATGAAATACTTTTTTTTTCCCTTTTTGGTTTTTGTTTTTTTGGGGAAAAAAATAAAATACATTCATAATATATGGTGTAATTATCCCATTGTAACACCACATAGCTCAGGTTAAGTTCATTGTATTAGGGAAGATGAAAGAAAAAAGCATTCATCATTTAGGCTAACGTCATCTCTGTCTAAATAATATGTAAAATGAAAAAGAAATAGTTGCCTATCCAGATGTCTTTCCATTTATTGAGTAAATTATAAATTTAGTCATTGAATTTACTTTAAACTTTTACTTTTGATTATGATAAGCTTTTGTTGGCTTTATTTGCTTTAATGTTGACGTGGGATGTGACAAAAAAGTGAGTCAATTAAATGAAAAAGTAATATTTGTTTATAATGTCATCTGATATGGTCAAGTCAACCATATTCTCTTATCATTTCCTAAATTTTGATACTTATTGAATCACTTGTATCTTAGAAAATAGTATTTGTCATAAATCATTTGATCATGTTGGATTCTTT

Coding sequence (CDS)

ATGTCTGGCAGTGGTGGAAGTGCGATCTTCAAATGGAAGAAATTGAAGGCATTAAGGATGCTCTGTTTCTCGAATCACAGTCACCGTTTGACCCAGATTTGCCCCATTTCGACCCATCTCAATTATCTTCACGTTTCGAGTCATCGCCGGCGGGAATCGTTCATCGGCGTTCAGGAGCGGTACAAATGGGACAACGGCGGGTCCGGTTCCGATGATTTCCATTCACAGTCCAACAACACAAGTACTCCAATCCGTAAGATTCGGGCCGAAGCCAATTGCCCACGTTGCTCTAAGCATATGGATATCCTCTTCTCTAACCGTCATTTCCCAACCCTCAATCCCCCTTCTTCCTCTTCTTGCGATGCTCCTCCAAATCGAAAAGAAGCTTACGAGGCTGTTAATTTGTGCCCCAATTGCAAAACCGCTTACTATTTCCGCCCTTACAAGATCGCTCCTCTACAGGGCAGCTTCATCGAGATCGGCAATCTGAATTCCAAACCGAAGAATTCCTCAGAAAGAAGGATCACTACCAAAGATGGTAAAGGTAATGCCATCGCCGGTTCTCCTGTTGAAAATTATGTGAATAGTAGGCTGAGAGTCTCGTTTTTCGAAACTGCGAGATCGTATGGTGGAGAACCGCCTGAGAATTGGCCTCCTGGACCACCTCCCGCTAATGGGTTGGCGGTGCATTCTCCTCCAGGTCCGCCATTTGCGCCCGGTGTGAACTTCATTCGTGCTACAGGTCCTGGTGGAAGCACCTCAGGTGCTGGTGGAAATGGCGCTGGTGATGGAAAGAAGAGTGAGTGGGGAGGATCGAATTTGGGGAAGGATCTACCCACTCCAAAAGAGATTTGCAAGGGCTTGGACAAATTTGTTATTGGCCAAGAGAAAGCCAAGAAGGTACTCTCTGTGGCTGTACATAACCATTACAAACGAATATATCATGCTTCCTTGAAAAAGAGGTCAGGAACTGAATCAGGAAGTCAAGATATGATAGATGATGATGATAACGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGCTCTGGGAAGACATTACTTGCAAAGACTTTGGCTCGATTTGTGAATGTGCCTTTTGTCATTGCTGATGCTACAACTTTAACACAGGCTGGTTATGTTGGAGAAGACGTTGAATCAATTTTGCACAAGCTGCTTGCTGCAGCAGAATTCAATGTACAAGCAGCTCAACAAGGGATGATTTACATTGATGAAGTTGACAAGATAACGAAGAAGGCTGAGAGTCTAAATATTAGCAGAGATGTTTCTGGTGAGGGTGTTCAACAGGCATTATTGAAAATGCTAGAAGGAACCATAGTAAATGTTCCTGAGAAGGGGGCAAGAAAACATCCTCGGGGTGATAACATTCAGATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCTATTGGTTTTGGAGCGCCTGTGCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCTGCAGTTACATCATCATTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCATATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTTTATCAGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAATGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTGCATTATACAGAGAAAGCACTGAGACAGATTGCCCAGAAAGCAATGGCCAAGAATACTGGTGCCAGAGGCTTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTACGAGGTTCCAGATGTTAAGACTGGAAACGATAGAGTAGATGCCGTTGTTGTTGATGAAGAGTCCGTTGGCTCGCTAAATTCGAGGGGTTGCGGAGGCAAAATTCTCCGTGGGGACGGAGCGTTGGACTGCTATTTGGCTGAGACCATGTTGAAACAATCACTGGATGATTTGGAGGTGGTTGAATTGCCGGAAGGTGAATCAGAGCTGACATCAAGAGCCGTGAGTATATAG

Protein sequence

MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQERYKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTKDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPFAPGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQKAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILRGDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI

Homology

[Close]

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 1.4e-218
Identity = 430/682 (63.05%), Postives = 499/682 (73.17%), Query Frame = 0


Query: 7   SAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQERYKWD-- 66
           S +++ + LK+L +            I P+S +L  L + S  RR     +QER+K +  
Sbjct: 2   SGLWRLRNLKSLAL--------HARSISPVS-NLYSLELGSCPRRR----IQERFKSEQG 61

Query: 67  NGGSGSDDFHSQSNNTSTPI--RKIRAEANCPRCSKHMDILFSNRHFPTLN----PPSSS 126
            GG G DDF         P+  RK+RAE NCPRCSK MD+LFSNR FP+ N    P  S 
Sbjct: 62  GGGGGGDDF-------PVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSD 121

Query: 127 SCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTK 186
           S  A    K  +++VN CP CKTAY F P  ++PLQG+FIEIG + S    ++    +  
Sbjct: 122 SSGA--GDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKS 181

Query: 187 DGKGNAIAGSPVENY-VNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSP--PGP 246
             K    +  P + +   ++LR SF++T RSYG EPPE+W P PP       HSP    P
Sbjct: 182 TRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPP-------HSPLNSSP 241

Query: 247 PFAPGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQ 306
           P    VN      P    +    +   D   S WGG+ LG+D PTPKEICK LDKFVIGQ
Sbjct: 242 PNTIPVN----ASPSAVDTSPLPDAVND--VSRWGGAGLGRDFPTPKEICKWLDKFVIGQ 301

Query: 307 EKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGK 366
            +AKKVLSVAV+NHYKRIYH S+KK S  +      IDDDDNVEL+KSNVLLMGPTGSGK
Sbjct: 302 SRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDNVELDKSNVLLMGPTGSGK 361

Query: 367 TLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDE 426
           TLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESILHKLL  AEFNVQAAQQG++YIDE
Sbjct: 362 TLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDE 421

Query: 427 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF 486
           VDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPRGD+IQIDTKDILF
Sbjct: 422 VDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILF 481

Query: 487 ICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGL 546
           ICGGAFVDLEKTI DRRQDSSIGFGAPVRANM   GVTS A+TSSLLESVES+DL AYGL
Sbjct: 482 ICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGL 541

Query: 547 IPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQ 606
           IPEF+GRFPILVSLSALTEDQL++VL EPKNALGKQYKKLF MN VKLH+TEKAL  I++
Sbjct: 542 IPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISK 601

Query: 607 KAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKIL 666
           +AM KNTGARGLRA+LESILTEAM+E+PD K G++R+DAV+VDEES  S  SRGC  KIL
Sbjct: 602 QAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKIL 643

Query: 667 RGDGALDCYLAETMLKQSLDDL 678
           RGDGA + YL+E   K + + +
Sbjct: 662 RGDGAFERYLSENKSKDATEPM 643

[Close]

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 1.1e-188
Identity = 371/552 (67.21%), Postives = 427/552 (77.36%), Query Frame = 0


Query: 147 PYKIAPLQGSFIEIGNLNSKPKNSSERRITTKDGKGNAIAGSPVENYVNSRLRVSFFETA 206
           PYKI+ L  SF++        +   ERR +TK       A     + V S + +      
Sbjct: 52  PYKISSLGTSFLD-------NRGGGERRNSTK-----CYAAQKKLSGVGSSVVI------ 111

Query: 207 RSYGGEPPENWPPGPPPANGLAVHSPPGPPFAPGVNFIRATGPGGSTSGAGGNGAGDGKK 266
            S  G+PP+ W    PP +G++V           VN  R  G GGS+ G  GNG G   K
Sbjct: 112 LSSQGDPPDLW---QPPGDGVSVRVN-----GSSVNLGRGGGGGGSSPGGPGNGTGSNSK 171

Query: 267 SE-WGGSNLGKDLPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTE 326
            + WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAV+NHYKRIYH S +KRS  E
Sbjct: 172 EDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGE 231

Query: 327 SGSQDMID-DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 386
           + S      DDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV
Sbjct: 232 TDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 291

Query: 387 GEDVESILHKLLAAAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 446
           GEDVESIL+KLL  A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKM
Sbjct: 292 GEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 351

Query: 447 LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVR 506
           LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RR DSSIGFGAPVR
Sbjct: 352 LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVR 411

Query: 507 ANMRMGGVTSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEP 566
           ANMR GGVT+AAV S+L+E+VESSDLIAYGLIPEF+GRFP+LVSLSALTE+QL+QVLTEP
Sbjct: 412 ANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEP 471

Query: 567 KNALGKQYKKLFGMNKVKLHYTEKALRQIAQKAMAKNTGARGLRAILESILTEAMYEVPD 626
           KNALGKQYKK++ MN VKLH+TE ALR IA+KA+ KNTGARGLRA+LESIL ++MYE+PD
Sbjct: 472 KNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPD 531

Query: 627 VKTGNDRVDAVVVDEESVGSLNSRGCGGKILRGDGALDCYLAETMLKQSLDDLEVVELPE 686
             TG+D ++AVVVDEE+V     RG G KILRG GAL  YL+ET  K S    +  E  +
Sbjct: 532 EGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSETNSKDSPQTTK--EGSD 575

Query: 687 GESELTSRAVSI 697
           GE+E+ +   S+
Sbjct: 592 GETEVEAEIPSV 575

[Close]

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 1.6e-169
Identity = 349/622 (56.11%), Postives = 422/622 (67.85%), Query Frame = 0


Query: 63  WDN-----GGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS 122
           WD+     GG G DD+             IR++ NCPRCS  M ++FSNR       P S
Sbjct: 59  WDSCSGGGGGGGGDDYD-----------HIRSDVNCPRCSAQMHVIFSNR-------PLS 118

Query: 123 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 182
            +   P      Y+AVN C  CKTA+YFRP+K++PLQGSFIE+G    K K + +     
Sbjct: 119 LTAREP----GIYQAVNFCSQCKTAFYFRPFKLSPLQGSFIELG----KVKGTDDDHDDD 178

Query: 183 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 242
            D +                         +S+    P NW                    
Sbjct: 179 DDDQ-------------------------KSF----PRNWK------------------- 238

Query: 243 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKD---LPTPKEICKGLDKFVIG 302
                        G  S   G  A + +    GG    +    LPTPKEIC+GLD+FVIG
Sbjct: 239 -----------IQGLRSDEDGEDADEEEDESNGGDKEKQSVIKLPTPKEICQGLDEFVIG 298

Query: 303 QEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDD-DNVELEKSNVLLMGPTGS 362
           QEKAKKVLSVAV+NHYKRIYHAS KK S +ES + DM DD+ D+VEL+KSNVLL+GPTGS
Sbjct: 299 QEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNIDHVELDKSNVLLLGPTGS 358

Query: 363 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYI 422
           GKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESIL+KL   A  NV+ AQ+G++YI
Sbjct: 359 GKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAGCNVEEAQRGIVYI 418

Query: 423 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PEKGARKHPRGDNIQIDTK 482
           DEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+V  PEKG R+ PRGD+IQ+DTK
Sbjct: 419 DEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTK 478

Query: 483 DILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLI 542
           DILFICGGAF+DLEKT+S+R+ D+SIGFGA VR NM   G++SAAVTSSLLES++S DL+
Sbjct: 479 DILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLV 538

Query: 543 AYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR 602
           AYGLIPEF+GR PILVSLSAL EDQLVQVLTEPK+ALGKQYKKLF MN V+L +TE A R
Sbjct: 539 AYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATR 595

Query: 603 QIAQKAMAKNTGARGLRAILESILTEAMYEVPD-VKTGNDRVDAVVVDEESVGSLNSRGC 662
            IA+KAM+KNTGARGLR+ILESILTEAM+EVPD +  G+  + AV+VDEE+VGS+ S GC
Sbjct: 599 LIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGC 595

Query: 663 GGKILRGDGALDCYLAETMLKQ 673
           G KIL+GD  L  ++ E   K+
Sbjct: 659 GAKILKGDNVLQQFVEEAESKE 595

[Close]

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot
Match: O67356 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex aeolicus (strain VF5) OX=224324 GN=clpX PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-107
Identity = 210/368 (57.07%), Postives = 275/368 (74.73%), Query Frame = 0


Query: 276 KDLPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDD 335
           KD+P P++I K LD++VIGQE+AKK+LSVAV+NHYKRI      K +G            
Sbjct: 57  KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI----KAKEAGLSL--------- 116

Query: 336 DNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKL 395
           D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 117 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 176

Query: 396 LAAAEFNVQAAQQGMIYIDEVDKITKKAE-SLNISRDVSGEGVQQALLKMLEGTIVNVPE 455
           L A +++V+AAQ+G++YIDE+DKI KK+  + +I+RDVSGEGVQQALLK++EG++VNVP 
Sbjct: 177 LQACDYDVKAAQKGIVYIDEIDKIAKKSGINPSITRDVSGEGVQQALLKIVEGSVVNVPP 236

Query: 456 KGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTS 515
           +G RKHP  + IQ+DT DILFICGGAFV LE  I  R   S +GF A ++          
Sbjct: 237 QGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIK---------K 296

Query: 516 AAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKK 575
                 LLE VE  DLI +G+IPEFIGRFP++ +L  LTED+LV++L EPKNAL KQY+K
Sbjct: 297 VDKEQDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQK 356

Query: 576 LFGMNKVKLHYTEKALRQIAQKAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDA 635
           LF +  VKL +TEKALR+IA++A+ + TGARGLRAI+E I+ + M+EVP +      V  
Sbjct: 357 LFELEGVKLTFTEKALREIAKEAIRRKTGARGLRAIMEDIMADIMFEVPSL----PGVKE 398

Query: 636 VVVDEESV 643
           V++DE  V
Sbjct: 417 VIIDENVV 398

[Close]

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot
Match: Q5LUP9 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=clpX PE=3 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 1.7e-107
Identity = 202/367 (55.04%), Postives = 276/367 (75.20%), Query Frame = 0


Query: 278 LPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDN 337
           +PTP++IC  LD +VIGQ  AK+VLSVAVHNHYKR+ HA        ++GS        +
Sbjct: 63  VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-------KAGS--------D 122

Query: 338 VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLA 397
           +EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL 
Sbjct: 123 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 182

Query: 398 AAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 457
           A+E+NV+ AQ+G++YIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G 
Sbjct: 183 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 242

Query: 458 RKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAV 517
           RKHP+ + +Q+DT +ILFICGGAF  L+K I+ R + S++GFGA VRA+   G       
Sbjct: 243 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERG------- 302

Query: 518 TSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFG 577
              L   +E  DL+ +GLIPEF+GR P+L +L  L ED LV +LT+PKNAL KQY++LF 
Sbjct: 303 VGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFE 362

Query: 578 MNKVKLHYTEKALRQIAQKAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVV 637
           +   +L +T+ AL+ IA++A+ + TGARGLR+I+E IL + M+++P +    D V  VVV
Sbjct: 363 LEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSM----DNVTKVVV 403

Query: 638 DEESVGS 645
           +EE+V S
Sbjct: 423 NEEAVTS 403

[Close]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL
Match: A0A6J1I8K8 (CLP protease regulatory subunit CLPX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111471965 PE=4 SV=1)

HSP 1 Score: 1276.2 bits (3301), Expect = 0.0e+00
Identity = 652/700 (93.14%), Postives = 676/700 (96.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLN LH SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNNLHASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--- 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS   
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSLP 120

Query: 121 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           SS DAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNS+PKNS ERRITT
Sbjct: 121 SSSDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSRPKNSLERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAGSP ENYVNSRLRVSFFETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+
Sbjct: 181 KDGKGNAIAGSPDENYVNSRLRVSFFETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPY 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNFIRATGPGGSTSG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFIRATGPGGSTSGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKT 360
           AKKVLSVAVHNHYKRIYHASLKK   G ES +QDMIDDDDNVELEKSNVLLMGPTGSGKT
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLKKCAPGIESETQDMIDDDDNVELEKSNVLLMGPTGSGKT 360

Query: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEV 420
           LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLA+AEFNVQAAQQGMIYIDEV
Sbjct: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLASAEFNVQAAQQGMIYIDEV 420

Query: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480
           DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI
Sbjct: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480

Query: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLI 540
           CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLI
Sbjct: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLI 540

Query: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQK 600
           PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHY+EKALR+IAQK
Sbjct: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYSEKALRRIAQK 600

Query: 601 AMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILR 660
           AM KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N   CGGKILR
Sbjct: 601 AMNKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASCGGKILR 660

Query: 661 GDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GDGAL+ YLAET LK+S D+LEV+ELPEGE+EL+SRAVSI
Sbjct: 661 GDGALERYLAETKLKESQDNLEVIELPEGETELSSRAVSI 700

[Close]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL
Match: A0A6J1F2C9 (CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438898 PE=4 SV=1)

HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 652/699 (93.28%), Postives = 675/699 (96.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLNYL+ SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNYLYASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--S 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS  S
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSLPS 120

Query: 121 SCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTK 180
           S DAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPL+GSFIEIGNLNSKPKNS ERRITTK
Sbjct: 121 SSDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLRGSFIEIGNLNSKPKNSLERRITTK 180

Query: 181 DGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPFA 240
           DGKGNAIAGSP ENYVNSRLRVSFFETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+A
Sbjct: 181 DGKGNAIAGSPDENYVNSRLRVSFFETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPYA 240

Query: 241 PGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA 300
           PGVNFIRATGPGGS SG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA
Sbjct: 241 PGVNFIRATGPGGSISGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA 300

Query: 301 KKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKTL 360
           KKVLSVAVHNHYKRIYHASLKK   GTES +QDMIDDDDNVELEKSNVLLMGPTGSGKTL
Sbjct: 301 KKVLSVAVHNHYKRIYHASLKKCAPGTESETQDMIDDDDNVELEKSNVLLMGPTGSGKTL 360

Query: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEVD 420
           LAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEVD
Sbjct: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVD 420

Query: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 480
           KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC
Sbjct: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 480

Query: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIP 540
           GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLIP
Sbjct: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLIP 540

Query: 541 EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQKA 600
           EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHYTEKALR+IAQKA
Sbjct: 541 EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYTEKALRRIAQKA 600

Query: 601 MAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILRG 660
           + KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N    GGKILRG
Sbjct: 601 INKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASYGGKILRG 660

Query: 661 DGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           DGAL+ YLAET LK+S D+LEV+ELPEGE+EL SRAVSI
Sbjct: 661 DGALERYLAETKLKESQDNLEVIELPEGETELPSRAVSI 699

[Close]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL
Match: A0A5A7TCK2 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001600 PE=4 SV=1)

HSP 1 Score: 1255.7 bits (3248), Expect = 0.0e+00
Identity = 641/699 (91.70%), Postives = 668/699 (95.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGS GSAIFKWKKLKA+++LCFSNH+ RLTQI PISTHLNYLHVSSHRRRESFIGVQER
Sbjct: 1   MSGSSGSAIFKWKKLKAMKLLCFSNHNFRLTQISPISTHLNYLHVSSHRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSSC 120
           YKWDNGGSGSDDFHSQSN T TPIRKIRAEANCPRCSKHMDILFSNRHFPTLN PSSSS 
Sbjct: 61  YKWDNGGSGSDDFHSQSNITGTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNLPSSSSA 120

Query: 121 DAPPNR---KEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           DAPP     +EAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT
Sbjct: 121 DAPPKAGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAG   ENYVN+RLRVSFFETARS+GGEPPENWPPGPPP NGLAVHSPPGPPF
Sbjct: 181 KDGKGNAIAGFSDENYVNNRLRVSFFETARSFGGEPPENWPPGPPPVNGLAVHSPPGPPF 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNF+RATGP GSTSG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFVRATGPNGSTSGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKTL 360
           AKKVLSVAVHNHYKRIYHASL+K SG ESG++D IDDDD+VELEKSNVLLMGPTGSGKTL
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLQKGSGNESGTRDTIDDDDSVELEKSNVLLMGPTGSGKTL 360

Query: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEVD 420
           LAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEVD
Sbjct: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVD 420

Query: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 480
           KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG+RKHPRGDNIQIDTKDILFIC
Sbjct: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGSRKHPRGDNIQIDTKDILFIC 480

Query: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIP 540
           GGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVESSDLIAYGLIP
Sbjct: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVESSDLIAYGLIP 540

Query: 541 EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQKA 600
           EFIGRFPILVSL ALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR IA+KA
Sbjct: 541 EFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRMIAKKA 600

Query: 601 MAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILRG 660
           +AKNTGARGLRAILESILTEAMYE+PDVKTGN+RVDAVVVDEESVG LNSRGCGGKILRG
Sbjct: 601 IAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNSRGCGGKILRG 660

Query: 661 DGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           DGAL+ YLAE  LK+S ++ EVVEL EGE+EL+SRA+SI
Sbjct: 661 DGALERYLAEIKLKESQENFEVVELQEGETELSSRAMSI 699

[Close]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL
Match: A0A5D3BMP6 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001550 PE=4 SV=1)

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 642/700 (91.71%), Postives = 669/700 (95.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGS GSAIFKWKKLKA+++LCFSNH+ RLTQI PISTHLNYLHVSSHRRRESFIGVQER
Sbjct: 1   MSGSSGSAIFKWKKLKAMKLLCFSNHNFRLTQISPISTHLNYLHVSSHRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSSC 120
           YKWDNGGSGSDDFHSQSN T TPIRKIRAEANCPRCSKHMDILFSNRHFPTLN PSSSS 
Sbjct: 61  YKWDNGGSGSDDFHSQSNITGTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNLPSSSSA 120

Query: 121 DAPPNR---KEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           DAPP     +EAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT
Sbjct: 121 DAPPKAGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAG   ENYVN+RLRVSFFETARS+GGEPPENWPPGPPP NGLAVHSPPGPPF
Sbjct: 181 KDGKGNAIAGFSDENYVNNRLRVSFFETARSFGGEPPENWPPGPPPVNGLAVHSPPGPPF 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNF+RATGP GSTSG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFVRATGPNGSTSGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKT 360
           AKKVLSVAVHNHYKRIYHASL+K RSG ESG++D IDDDD+VELEKSNVLLMGPTGSGKT
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLQKGRSGNESGTRDTIDDDDSVELEKSNVLLMGPTGSGKT 360

Query: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEV 420
           LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEV
Sbjct: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEV 420

Query: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480
           DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG+RKHPRGDNIQIDTKDILFI
Sbjct: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGSRKHPRGDNIQIDTKDILFI 480

Query: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLI 540
           CGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVESSDLIAYGLI
Sbjct: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVESSDLIAYGLI 540

Query: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQK 600
           PEFIGRFPILVSL ALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR IA+K
Sbjct: 541 PEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRMIAKK 600

Query: 601 AMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILR 660
           A+AKNTGARGLRAILESILTEAMYE+PDVKTGN+RVDAVVVDEESVG LNSRGCGGKILR
Sbjct: 601 AIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNSRGCGGKILR 660

Query: 661 GDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GDGAL+ YLAE  LK+S ++ EVVEL EGE+EL+SRA+SI
Sbjct: 661 GDGALERYLAEIKLKESQENFEVVELQEGETELSSRAMSI 700

[Close]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL
Match: A0A6J1DP37 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022984 PE=4 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 644/705 (91.35%), Postives = 672/705 (95.32%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKK-LKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQE 60
           MSGSGGSAIFKWKK LKA+R+LCFSN +HRLTQICPISTHL+YLHVSSHRRRESFIGVQE
Sbjct: 1   MSGSGGSAIFKWKKTLKAIRLLCFSNPNHRLTQICPISTHLSYLHVSSHRRRESFIGVQE 60

Query: 61  RYKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSS- 120
           RYKWDNGGSGSDDF SQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSS 
Sbjct: 61  RYKWDNGGSGSDDFRSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSI 120

Query: 121 --SCDAPPNR----KEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSE 180
             SCDAPP      +EAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSE
Sbjct: 121 PFSCDAPPKAAGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSE 180

Query: 181 RRITTKDGKGNA-IAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHS 240
           RRITTKDGK ++ +AGS V+NYVN+RLRV+FFET RSYGGEPPENWPPG PP NGL VHS
Sbjct: 181 RRITTKDGKSSSPMAGSTVDNYVNNRLRVAFFETVRSYGGEPPENWPPGSPPPNGLQVHS 240

Query: 241 PPGPPFAPGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKF 300
           PPGPPFAPG NFIRA+GPGGSTSG+GGNGAGDGKK EWGGSNLGKDLPTPKEIC+GLDKF
Sbjct: 241 PPGPPFAPGANFIRASGPGGSTSGSGGNGAGDGKKIEWGGSNLGKDLPTPKEICRGLDKF 300

Query: 301 VIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDNVELEKSNVLLMGPT 360
           VIGQE+AKKVLSVAVHNHYKRIYHASL+K SGTESG+QD+IDDDDNVELEKSNVLLMGPT
Sbjct: 301 VIGQERAKKVLSVAVHNHYKRIYHASLQKGSGTESGNQDVIDDDDNVELEKSNVLLMGPT 360

Query: 361 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMI 420
           GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLL AAEFNVQAAQQGMI
Sbjct: 361 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTAAEFNVQAAQQGMI 420

Query: 421 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTK 480
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQIDTK
Sbjct: 421 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQIDTK 480

Query: 481 DILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLI 540
           DILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLI
Sbjct: 481 DILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLI 540

Query: 541 AYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR 600
           AYGLIPEFIGRFPILVSL ALTEDQLVQVLTEPKNALGKQYKKLFGMN VKLHYTEKALR
Sbjct: 541 AYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNNVKLHYTEKALR 600

Query: 601 QIAQKAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCG 660
           +IAQKAMAKNTGARGLRAILES LTEAMYE+PDVKTGNDRVDAVVVDEES+GSLNS GCG
Sbjct: 601 RIAQKAMAKNTGARGLRAILESTLTEAMYEIPDVKTGNDRVDAVVVDEESIGSLNSSGCG 660

Query: 661 GKILRGDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GKILRGDGA + YLAET LK+S ++LEVVEL EGESEL SRAVSI
Sbjct: 661 GKILRGDGAFERYLAETKLKESQNNLEVVELAEGESEL-SRAVSI 704

[Close]

BLAST of Lcy12g003520 vs. NCBI nr
Match: XP_022973416.1 (CLP protease regulatory subunit CLPX3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1276.2 bits (3301), Expect = 0.0e+00
Identity = 652/700 (93.14%), Postives = 676/700 (96.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLN LH SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNNLHASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--- 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS   
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSLP 120

Query: 121 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           SS DAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNS+PKNS ERRITT
Sbjct: 121 SSSDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSRPKNSLERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAGSP ENYVNSRLRVSFFETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+
Sbjct: 181 KDGKGNAIAGSPDENYVNSRLRVSFFETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPY 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNFIRATGPGGSTSG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFIRATGPGGSTSGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKT 360
           AKKVLSVAVHNHYKRIYHASLKK   G ES +QDMIDDDDNVELEKSNVLLMGPTGSGKT
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLKKCAPGIESETQDMIDDDDNVELEKSNVLLMGPTGSGKT 360

Query: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEV 420
           LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLA+AEFNVQAAQQGMIYIDEV
Sbjct: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLASAEFNVQAAQQGMIYIDEV 420

Query: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480
           DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI
Sbjct: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480

Query: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLI 540
           CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLI
Sbjct: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLI 540

Query: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQK 600
           PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHY+EKALR+IAQK
Sbjct: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYSEKALRRIAQK 600

Query: 601 AMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILR 660
           AM KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N   CGGKILR
Sbjct: 601 AMNKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASCGGKILR 660

Query: 661 GDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GDGAL+ YLAET LK+S D+LEV+ELPEGE+EL+SRAVSI
Sbjct: 661 GDGALERYLAETKLKESQDNLEVIELPEGETELSSRAVSI 700

[Close]

BLAST of Lcy12g003520 vs. NCBI nr
Match: KAG7037189.1 (CLP protease regulatory subunit CLPX3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1274.2 bits (3296), Expect = 0.0e+00
Identity = 652/700 (93.14%), Postives = 674/700 (96.29%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLNYL+ SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNYLYASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--- 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS   
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSLP 120

Query: 121 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           SS  APPNRKEAYEAVNLCPNCKTAYYFRPYKIAPL+GSFIEIGNLNSKPKNS ERRITT
Sbjct: 121 SSSGAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLRGSFIEIGNLNSKPKNSLERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAGSP ENYVNSRLRVSFFETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+
Sbjct: 181 KDGKGNAIAGSPDENYVNSRLRVSFFETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPY 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNFIRATGPGGS SG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFIRATGPGGSISGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKT 360
           AKKVLSVAVHNHYKRIYHASLKK   GTES +QDMIDDDDNVELEKSNVLLMGPTGSGKT
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLKKCAPGTESETQDMIDDDDNVELEKSNVLLMGPTGSGKT 360

Query: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEV 420
           LLAKTLARFVNVPFVIADAT LTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEV
Sbjct: 361 LLAKTLARFVNVPFVIADATNLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEV 420

Query: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480
           DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI
Sbjct: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480

Query: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLI 540
           CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLI
Sbjct: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLI 540

Query: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQK 600
           PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHYTEKALR+IAQK
Sbjct: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYTEKALRRIAQK 600

Query: 601 AMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILR 660
           AM KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N   CGGKILR
Sbjct: 601 AMNKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASCGGKILR 660

Query: 661 GDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GDGAL+ YLAET LK+S D+LEV+ELPEGE+EL SRAVSI
Sbjct: 661 GDGALERYLAETKLKESQDNLEVIELPEGETELPSRAVSI 700

[Close]

BLAST of Lcy12g003520 vs. NCBI nr
Match: XP_023523814.1 (CLP protease regulatory subunit CLPX1, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 652/700 (93.14%), Postives = 673/700 (96.14%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLNYLH SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNYLHASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--- 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS   
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSLP 120

Query: 121 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 180
           SS DAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKN +ERRITT
Sbjct: 121 SSSDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNFAERRITT 180

Query: 181 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 240
           KDGKGNAIAGSP ENYVNSRLRVSF ETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+
Sbjct: 181 KDGKGNAIAGSPDENYVNSRLRVSFLETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPY 240

Query: 241 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300
           APGVNFIRATGPGGS SG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK
Sbjct: 241 APGVNFIRATGPGGSISGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEK 300

Query: 301 AKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKT 360
           AKKVLSVAVHNHYKRIYHASLKK   GTES +QDMIDDDDNVELEKSNVLLMGPTGSGKT
Sbjct: 301 AKKVLSVAVHNHYKRIYHASLKKCAPGTESETQDMIDDDDNVELEKSNVLLMGPTGSGKT 360

Query: 361 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEV 420
           LLAKTLARFVNVPFVI DATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEV
Sbjct: 361 LLAKTLARFVNVPFVITDATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEV 420

Query: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480
           DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI
Sbjct: 421 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 480

Query: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLI 540
           CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLI
Sbjct: 481 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLI 540

Query: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQK 600
           PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHYTEKALR+IAQK
Sbjct: 541 PEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYTEKALRRIAQK 600

Query: 601 AMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILR 660
           AM KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N    GGKILR
Sbjct: 601 AMNKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASYGGKILR 660

Query: 661 GDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           GDGAL+ YLAET LK+S D+LEV+ELPEGE+EL SRAVSI
Sbjct: 661 GDGALERYLAETKLKESQDNLEVIELPEGETELPSRAVSI 700

[Close]

BLAST of Lcy12g003520 vs. NCBI nr
Match: XP_022932495.1 (CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 652/699 (93.28%), Postives = 675/699 (96.57%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQER 60
           MSGSGG+AIFKWKKL+A+R+LCFSNHSHRLTQICPISTHLNYL+ SS+RRRESFIGVQER
Sbjct: 1   MSGSGGTAIFKWKKLRAIRLLCFSNHSHRLTQICPISTHLNYLYASSYRRRESFIGVQER 60

Query: 61  YKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS--S 120
           YKWDNGGSGSDDFHSQS NTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS  S
Sbjct: 61  YKWDNGGSGSDDFHSQSYNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSLPS 120

Query: 121 SCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTK 180
           S DAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPL+GSFIEIGNLNSKPKNS ERRITTK
Sbjct: 121 SSDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLRGSFIEIGNLNSKPKNSLERRITTK 180

Query: 181 DGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPFA 240
           DGKGNAIAGSP ENYVNSRLRVSFFETAR YGGEPPENWPPGPPP NGLAVHSPPGPP+A
Sbjct: 181 DGKGNAIAGSPDENYVNSRLRVSFFETARLYGGEPPENWPPGPPPVNGLAVHSPPGPPYA 240

Query: 241 PGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA 300
           PGVNFIRATGPGGS SG+GGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA
Sbjct: 241 PGVNFIRATGPGGSISGSGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQEKA 300

Query: 301 KKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGKTL 360
           KKVLSVAVHNHYKRIYHASLKK   GTES +QDMIDDDDNVELEKSNVLLMGPTGSGKTL
Sbjct: 301 KKVLSVAVHNHYKRIYHASLKKCAPGTESETQDMIDDDDNVELEKSNVLLMGPTGSGKTL 360

Query: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDEVD 420
           LAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIYIDEVD
Sbjct: 361 LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVD 420

Query: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 480
           KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC
Sbjct: 421 KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 480

Query: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIP 540
           GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLE+VESSDLIAYGLIP
Sbjct: 481 GGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLETVESSDLIAYGLIP 540

Query: 541 EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQKA 600
           EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLF MNKVKLHYTEKALR+IAQKA
Sbjct: 541 EFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNKVKLHYTEKALRRIAQKA 600

Query: 601 MAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKILRG 660
           + KNTGARGLRAILE+ILTEAMYE+PDVKTG+DRVDAVVVDEESVGS+N    GGKILRG
Sbjct: 601 INKNTGARGLRAILETILTEAMYEIPDVKTGDDRVDAVVVDEESVGSVNLASYGGKILRG 660

Query: 661 DGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           DGAL+ YLAET LK+S D+LEV+ELPEGE+EL SRAVSI
Sbjct: 661 DGALERYLAETKLKESQDNLEVIELPEGETELPSRAVSI 699

[Close]

BLAST of Lcy12g003520 vs. NCBI nr
Match: XP_038890013.1 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 651/704 (92.47%), Postives = 671/704 (95.31%), Query Frame = 0


Query: 1   MSGSGGSAIFKWKKLKAL-RMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQE 60
           MSGSGGSAIFKWKKLKA+ R+LCFSNH +RLTQICPISTHLNYLHVSSHRRRESFIGVQE
Sbjct: 1   MSGSGGSAIFKWKKLKAIRRLLCFSNHHYRLTQICPISTHLNYLHVSSHRRRESFIGVQE 60

Query: 61  RYKWDNGGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSS- 120
           RYKWDNGGSGSDDFHSQ+NNT TPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSS 
Sbjct: 61  RYKWDNGGSGSDDFHSQTNNTGTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSSSL 120

Query: 121 --SCDAPPNR---KEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSER 180
             S DAPP     +EAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSER
Sbjct: 121 SFSGDAPPKTGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSER 180

Query: 181 RITTKDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPP 240
           RITTKDGKGNAIAG   ENYVNSRLRVSF ETARSYGGEPPENWPPGPPP NGLAVHSPP
Sbjct: 181 RITTKDGKGNAIAGFSDENYVNSRLRVSFLETARSYGGEPPENWPPGPPPVNGLAVHSPP 240

Query: 241 GPPFAPGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVI 300
           GPPFAPGVNF+RATGP GSTSG+GGNG GDGKKSEWGGSNLGKDLPTPKEICKGLDKFVI
Sbjct: 241 GPPFAPGVNFVRATGPNGSTSGSGGNGTGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVI 300

Query: 301 GQEKAKKVLSVAVHNHYKRIYHASLKK-RSGTESGSQDMIDDDDNVELEKSNVLLMGPTG 360
           GQEKAKKVLSVAVHNHYKRIYHASL+K RSG+ESG QDMIDDDDNVELEKSNVLLMGPTG
Sbjct: 301 GQEKAKKVLSVAVHNHYKRIYHASLQKGRSGSESGPQDMIDDDDNVELEKSNVLLMGPTG 360

Query: 361 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIY 420
           SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL+KLLAAAEFNVQAAQQGMIY
Sbjct: 361 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIY 420

Query: 421 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKD 480
           IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR DNIQIDTKD
Sbjct: 421 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRCDNIQIDTKD 480

Query: 481 ILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIA 540
           ILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVT+AAVTSSLLESVESSDL+A
Sbjct: 481 ILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTNAAVTSSLLESVESSDLVA 540

Query: 541 YGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQ 600
           YGLIPEFIGRFPILVSL ALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR 
Sbjct: 541 YGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRM 600

Query: 601 IAQKAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGG 660
           IAQKAMAKNTGARGLRAILESILTEAMYE+PDVKTGN+RVDAVVVDEESVGSLNSRGCGG
Sbjct: 601 IAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGSLNSRGCGG 660

Query: 661 KILRGDGALDCYLAETMLKQSLDDLEVVELPEGESELTSRAVSI 697
           KILRGDGAL+ YLAET LK+S +++EVVEL     EL+SRA SI
Sbjct: 661 KILRGDGALERYLAETKLKESQENMEVVEL----QELSSRAASI 700

[Close]

BLAST of Lcy12g003520 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease )

HSP 1 Score: 760.8 bits (1963), Expect = 9.8e-220
Identity = 430/682 (63.05%), Postives = 499/682 (73.17%), Query Frame = 0


Query: 7   SAIFKWKKLKALRMLCFSNHSHRLTQICPISTHLNYLHVSSHRRRESFIGVQERYKWD-- 66
           S +++ + LK+L +            I P+S +L  L + S  RR     +QER+K +  
Sbjct: 2   SGLWRLRNLKSLAL--------HARSISPVS-NLYSLELGSCPRRR----IQERFKSEQG 61

Query: 67  NGGSGSDDFHSQSNNTSTPI--RKIRAEANCPRCSKHMDILFSNRHFPTLN----PPSSS 126
            GG G DDF         P+  RK+RAE NCPRCSK MD+LFSNR FP+ N    P  S 
Sbjct: 62  GGGGGGDDF-------PVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDSD 121

Query: 127 SCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTK 186
           S  A    K  +++VN CP CKTAY F P  ++PLQG+FIEIG + S    ++    +  
Sbjct: 122 SSGA--GDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKS 181

Query: 187 DGKGNAIAGSPVENY-VNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSP--PGP 246
             K    +  P + +   ++LR SF++T RSYG EPPE+W P PP       HSP    P
Sbjct: 182 TRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPP-------HSPLNSSP 241

Query: 247 PFAPGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKDLPTPKEICKGLDKFVIGQ 306
           P    VN      P    +    +   D   S WGG+ LG+D PTPKEICK LDKFVIGQ
Sbjct: 242 PNTIPVN----ASPSAVDTSPLPDAVND--VSRWGGAGLGRDFPTPKEICKWLDKFVIGQ 301

Query: 307 EKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDDDNVELEKSNVLLMGPTGSGK 366
            +AKKVLSVAV+NHYKRIYH S+KK S  +      IDDDDNVEL+KSNVLLMGPTGSGK
Sbjct: 302 SRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDNVELDKSNVLLMGPTGSGK 361

Query: 367 TLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYIDE 426
           TLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESILHKLL  AEFNVQAAQQG++YIDE
Sbjct: 362 TLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDE 421

Query: 427 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF 486
           VDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPRGD+IQIDTKDILF
Sbjct: 422 VDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILF 481

Query: 487 ICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGL 546
           ICGGAFVDLEKTI DRRQDSSIGFGAPVRANM   GVTS A+TSSLLESVES+DL AYGL
Sbjct: 482 ICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGL 541

Query: 547 IPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRQIAQ 606
           IPEF+GRFPILVSLSALTEDQL++VL EPKNALGKQYKKLF MN VKLH+TEKAL  I++
Sbjct: 542 IPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISK 601

Query: 607 KAMAKNTGARGLRAILESILTEAMYEVPDVKTGNDRVDAVVVDEESVGSLNSRGCGGKIL 666
           +AM KNTGARGLRA+LESILTEAM+E+PD K G++R+DAV+VDEES  S  SRGC  KIL
Sbjct: 602 QAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKIL 643

Query: 667 RGDGALDCYLAETMLKQSLDDL 678
           RGDGA + YL+E   K + + +
Sbjct: 662 RGDGAFERYLSENKSKDATEPM 643

[Close]

BLAST of Lcy12g003520 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X )

HSP 1 Score: 661.4 bits (1705), Expect = 8.1e-190
Identity = 371/552 (67.21%), Postives = 427/552 (77.36%), Query Frame = 0


Query: 147 PYKIAPLQGSFIEIGNLNSKPKNSSERRITTKDGKGNAIAGSPVENYVNSRLRVSFFETA 206
           PYKI+ L  SF++        +   ERR +TK       A     + V S + +      
Sbjct: 52  PYKISSLGTSFLD-------NRGGGERRNSTK-----CYAAQKKLSGVGSSVVI------ 111

Query: 207 RSYGGEPPENWPPGPPPANGLAVHSPPGPPFAPGVNFIRATGPGGSTSGAGGNGAGDGKK 266
            S  G+PP+ W    PP +G++V           VN  R  G GGS+ G  GNG G   K
Sbjct: 112 LSSQGDPPDLW---QPPGDGVSVRVN-----GSSVNLGRGGGGGGSSPGGPGNGTGSNSK 171

Query: 267 SE-WGGSNLGKDLPTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLKKRSGTE 326
            + WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAV+NHYKRIYH S +KRS  E
Sbjct: 172 EDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGE 231

Query: 327 SGSQDMID-DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 386
           + S      DDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV
Sbjct: 232 TDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 291

Query: 387 GEDVESILHKLLAAAEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 446
           GEDVESIL+KLL  A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKM
Sbjct: 292 GEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 351

Query: 447 LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVR 506
           LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD+EKTIS+RR DSSIGFGAPVR
Sbjct: 352 LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVR 411

Query: 507 ANMRMGGVTSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEP 566
           ANMR GGVT+AAV S+L+E+VESSDLIAYGLIPEF+GRFP+LVSLSALTE+QL+QVLTEP
Sbjct: 412 ANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEP 471

Query: 567 KNALGKQYKKLFGMNKVKLHYTEKALRQIAQKAMAKNTGARGLRAILESILTEAMYEVPD 626
           KNALGKQYKK++ MN VKLH+TE ALR IA+KA+ KNTGARGLRA+LESIL ++MYE+PD
Sbjct: 472 KNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPD 531

Query: 627 VKTGNDRVDAVVVDEESVGSLNSRGCGGKILRGDGALDCYLAETMLKQSLDDLEVVELPE 686
             TG+D ++AVVVDEE+V     RG G KILRG GAL  YL+ET  K S    +  E  +
Sbjct: 532 EGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSETNSKDSPQTTK--EGSD 575

Query: 687 GESELTSRAVSI 697
           GE+E+ +   S+
Sbjct: 592 GETEVEAEIPSV 575

[Close]

BLAST of Lcy12g003520 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease )

HSP 1 Score: 597.8 bits (1540), Expect = 1.1e-170
Identity = 349/622 (56.11%), Postives = 422/622 (67.85%), Query Frame = 0


Query: 63  WDN-----GGSGSDDFHSQSNNTSTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNPPSS 122
           WD+     GG G DD+             IR++ NCPRCS  M ++FSNR       P S
Sbjct: 59  WDSCSGGGGGGGGDDYD-----------HIRSDVNCPRCSAQMHVIFSNR-------PLS 118

Query: 123 SSCDAPPNRKEAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITT 182
            +   P      Y+AVN C  CKTA+YFRP+K++PLQGSFIE+G    K K + +     
Sbjct: 119 LTAREP----GIYQAVNFCSQCKTAFYFRPFKLSPLQGSFIELG----KVKGTDDDHDDD 178

Query: 183 KDGKGNAIAGSPVENYVNSRLRVSFFETARSYGGEPPENWPPGPPPANGLAVHSPPGPPF 242
            D +                         +S+    P NW                    
Sbjct: 179 DDDQ-------------------------KSF----PRNWK------------------- 238

Query: 243 APGVNFIRATGPGGSTSGAGGNGAGDGKKSEWGGSNLGKD---LPTPKEICKGLDKFVIG 302
                        G  S   G  A + +    GG    +    LPTPKEIC+GLD+FVIG
Sbjct: 239 -----------IQGLRSDEDGEDADEEEDESNGGDKEKQSVIKLPTPKEICQGLDEFVIG 298

Query: 303 QEKAKKVLSVAVHNHYKRIYHASLKKRSGTESGSQDMIDDD-DNVELEKSNVLLMGPTGS 362
           QEKAKKVLSVAV+NHYKRIYHAS KK S +ES + DM DD+ D+VEL+KSNVLL+GPTGS
Sbjct: 299 QEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNIDHVELDKSNVLLLGPTGS 358

Query: 363 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAEFNVQAAQQGMIYI 422
           GKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESIL+KL   A  NV+ AQ+G++YI
Sbjct: 359 GKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAGCNVEEAQRGIVYI 418

Query: 423 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PEKGARKHPRGDNIQIDTK 482
           DEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+V  PEKG R+ PRGD+IQ+DTK
Sbjct: 419 DEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTK 478

Query: 483 DILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLI 542
           DILFICGGAF+DLEKT+S+R+ D+SIGFGA VR NM   G++SAAVTSSLLES++S DL+
Sbjct: 479 DILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLV 538

Query: 543 AYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALR 602
           AYGLIPEF+GR PILVSLSAL EDQLVQVLTEPK+ALGKQYKKLF MN V+L +TE A R
Sbjct: 539 AYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATR 595

Query: 603 QIAQKAMAKNTGARGLRAILESILTEAMYEVPD-VKTGNDRVDAVVVDEESVGSLNSRGC 662
            IA+KAM+KNTGARGLR+ILESILTEAM+EVPD +  G+  + AV+VDEE+VGS+ S GC
Sbjct: 599 LIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGC 595

Query: 663 GGKILRGDGALDCYLAETMLKQ 673
           G KIL+GD  L  ++ E   K+
Sbjct: 659 GAKILKGDNVLQQFVEEAESKE 595

[Close]

BLAST of Lcy12g003520 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 46.6 bits (109), Expect = 9.5e-05
Identity = 33/108 (30.56%), Postives = 53/108 (49.07%), Query Frame = 0


Query: 341 EKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAE 400
           +   VLL GP G+GKTLLA+ +A   +  F+    + L Q  Y+GE    +    + A E
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMARE 253

Query: 401 FNVQAAQQGMIYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 448
                    +I++DE+D I + + ES + + D   +     LL  L+G
Sbjct: 254 H-----APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

[Close]

BLAST of Lcy12g003520 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.5e-05
Identity = 33/108 (30.56%), Postives = 53/108 (49.07%), Query Frame = 0


Query: 341 EKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLAAAE 400
           +   VLL GP G+GKTLLA+ +A   +  F+    + L Q  Y+GE    +    + A E
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMARE 253

Query: 401 FNVQAAQQGMIYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKMLEG 448
                    +I++DE+D I + + ES + + D   +     LL  L+G
Sbjct: 254 H-----APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295

The following BLAST results are available for this feature:

BLAST of Lcy12g003520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66GN9	1.4e-218	63.05	CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q9FK07	1.1e-188	67.21	CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
F4K7F6	1.6e-169	56.11	CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
O67356	1.3e-107	57.07	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex aeolicus (strain ...	[more]
Q5LUP9	1.7e-107	55.04	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria pomeroyi (strain...	[more]

BLAST of Lcy12g003520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8K8	0.0e+00	93.14	CLP protease regulatory subunit CLPX3, mitochondrial-like OS=Cucurbita maxima OX...	[more]
A0A6J1F2C9	0.0e+00	93.28	CLP protease regulatory subunit CLPX1, mitochondrial-like OS=Cucurbita moschata ...	[more]
A0A5A7TCK2	0.0e+00	91.70	ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. ma...	[more]
A0A5D3BMP6	0.0e+00	91.71	ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. ma...	[more]
A0A6J1DP37	0.0e+00	91.35	CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 OS=Momordica cha...	[more]

BLAST of Lcy12g003520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973416.1	0.0e+00	93.14	CLP protease regulatory subunit CLPX3, mitochondrial-like [Cucurbita maxima]	[more]
KAG7037189.1	0.0e+00	93.14	CLP protease regulatory subunit CLPX3, mitochondrial [Cucurbita argyrosperma sub...	[more]
XP_023523814.1	0.0e+00	93.14	CLP protease regulatory subunit CLPX1, mitochondrial-like isoform X1 [Cucurbita ...	[more]
XP_022932495.1	0.0e+00	93.28	CLP protease regulatory subunit CLPX1, mitochondrial-like [Cucurbita moschata]	[more]
XP_038890013.1	0.0e+00	92.47	CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 [Benincasa hispi...	[more]

BLAST of Lcy12g003520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33360.1	9.8e-220	63.05	ATP-dependent Clp protease	[more]
AT5G53350.1	8.1e-190	67.21	CLP protease regulatory subunit X	[more]
AT5G49840.1	1.1e-170	56.11	ATP-dependent Clp protease	[more]
AT5G19990.1	9.5e-05	30.56	regulatory particle triple-A ATPase 6A	[more]
AT5G20000.1	9.5e-05	30.56	AAA-type ATPase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019489	Clp ATPase, C-terminal	SMART	SM01086	ClpB_D2_small_2	coord: 552..645 e-value: 4.5E-27 score: 105.9
IPR019489	Clp ATPase, C-terminal	PFAM	PF10431	ClpB_D2-small	coord: 552..623 e-value: 1.1E-13 score: 51.0
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 341..503 e-value: 1.4E-9 score: 47.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 272..550 e-value: 2.0E-116 score: 390.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 277..637
None	No IPR available	GENE3D	1.10.8.60		coord: 551..650 e-value: 1.3E-34 score: 120.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..231
None	No IPR available	PANTHER	PTHR48102:SF9	ATPASE, AAA-TYPE, CORE-RELATED	coord: 45..694
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 45..694
None	No IPR available	CDD	cd00009	AAA	coord: 342..453 e-value: 2.24107E-14 score: 69.0971
IPR003959	ATPase, AAA-type, core	PFAM	PF07724	AAA_2	coord: 341..545 e-value: 1.1E-43 score: 149.3
IPR004487	Clp protease, ATP-binding subunit ClpX	TIGRFAM	TIGR00382	TIGR00382	coord: 273..642 e-value: 3.4E-151 score: 501.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g003520.1	Lcy12g003520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding