Lcy12g003100 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g003100
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H
LocationChr12: 9106849 .. 9112008 (-)
RNA-Seq ExpressionLcy12g003100
SyntenyLcy12g003100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTGTGCAACTGCTGCAAAGAAGGTATGCCGTCGTGGGTTCTAGAGGGGAGGAAATGTGGATAAGAAGAAAAAGTGAAAAATAAACCTATGTAGCTGCGACCTGCGACAATGAAACGGAGAAGAAAGAAAGTGGTGGAAAGAGGGGGAGTAGAATTAGGGTTTTCTTTTATATTACCAAAAATATAATAAATTCATGGAAAATATGGAACGAAAGATGAAAGTGTGGTTTTTTTTTCTCCTAATATGTGTTTGTACATATATATTGAGTAAGTTCTAATATGTATATATAAAATAAACATTTTGGAAATTTGGAAATGAAAAGATGAATGTTTTTTTTAATAAACAAGGGCATAAAAAAATGCTTTTTTTTTTAATATACAAGGGTATAATCGTAAAATTGTTAATTTCTTTTTATTTCTTTTAAGCATCCAAACAAGAAAAATAAATTTCTAATGATATGAAATCCATTAAAATCCATTAGGGCCTGTTTGGGCCTCCAACTTTGGAAGCCCATGTTTACAAAAAACCCAAACTCAGTGTTTGGGGCTCGGTTCTTAGAAACCGGTGATTAGGGTTTTGTAACCCTCCACTTCAACAATGCAACGCCGCTTTGGATCCCCCACTTTCGTTCACTGTGTTCTCTCTCTTGTTTTCCTTCTCTCGTTTGGTTTTCTCTCTGGTAGTCGTTCTCTCGGCTATTTTACCTTTGTTCTTCAAATTTTCATGCCCTCTCTCCTTCTCTGGTATTTTCGGCACTCAAATGGCATGTTGGAGGTGAGATTTTTTGGTTTTTTCTTATGGGGTTTCCTAATCAGATCTCTAATCTCCTCTGAGATCTGTGTTCTTTGTTCTTATTTTTTCCGGATCTGATCTTCCTTACTCTCGTTCCATGCTATCTTCAGCTCTTGGATTGCATGCTTATCTTCTTCGGTTTCGGAGGGACGTTCGATTTAAGATTTGTGATCTCCTCTCAGATCTGTCTTCTCCTCGCTCCCTCTTCATGAATCTGAGGTACCGCTCGTCTTTTTTTTTTTTTTTTTGCGTCCCTTGTTTCGGATCTAACCCTTCTTATGGATCTAACCCTAAAATTTTTTCTTACAGATCCCACCTCATGCCGCTTCAACTTGTCGCAGCTGTCGACGTTCGATTCGGGATCCGCATGGTATATTGGAGCACGGTGAGGGGTGGGAAGCAGGCAAGTCGTAACCGGCCAATGATGTTCCTAATGCATCCAAGCAAATTTTCCCCTATTTTTTTTTTCAAAATTTTTCATTGTCATTTTTTCTCTCTTCACTCTTTTTCTAATCGCATATCTTGTTAATGTTTTTTGTGTTCTAACCTTACATTTTCTTTATGATTCTGGCTTTTTTTTTTCTCCGCATGATTCTCGTGTTCTGATTTTTGGTTTGTTCTCATAACACCCCCCCAATGTGTTTTCTTCATATTCTTTGTTGTTCTGATCGCTTATCTTGTTAATTTTTTCTCCACATGATTCTCGTGTTCTGATTGGAGCACGGTGAGGGGTGGGAAGATTATTTTCTTGACAATCTTCGTGCAGCCCATATGTTTCCTTATAATCATTTTGGTTATAATCCTTCTTATTTGTGTTGTTCATGCTAATGGTTCTGTCCATATTTTTTACTTCTCATTTGTGTAGTTCATGCACATGGTTCTGTCCATATTTTTAACTTCTCATTTGTGTTGTTCATGCTCATGGTTCTGTCCATATTTTGTACTTCTCATGTATGTTGTTCATGCTGATGGTTTTGTCCAAAAAATATGCTTCCTCATTATGTTGTTCCTAATGTTGGTGTTGACCATATTTTTCATTCTAATTACTTTGTTCATACGATTGGTTCTGTCCAGATGTTTCCTTCTCATTATTTTGTTCCTATTCATGGTTTTGTCCATATGTCATTGATTTTCCTCTGTTTTTGGTTGTTGGATTTCAAGTTTTGGTTGATAGCCACGATTTGTATTTTTAAAATTGAGGACTTCAATTTACTTTTATTTACCAACTTTGCACAATTTTTTGTATTTAAAAAATAAATGCCTGAAACTAATGCACCTGAGGTCGGTTACATTTCCAATTTTTTTTTCTAAACTTAGTTGTTGTTTGGTTACTTTCTGACTATTCCGGTTTATTTTGAACCAATCTTTCCATTCTGTAGTTGGTTTTGAACGTGATAAATTATACATGTGGGTAGTTTGCATTTAATTTGGTTAGGTTGCATTTATTCAGCCATCCATCAACCATCTATCTTCCTTTTTAAAAAGTAGGGCAGATTGCATTTATTTTCATTACATAAATGCAATCTACCTTTTCTTTTCTTGAAAAGGCATGTACACTTCATTAATGTTATCAATCCTATCATGTTTTTATTACATCCAACCACCTTCTTTCCATCCTTTATTTTAACAACACTACCACTCATTTCTTCCTTGAGGAAAGTCTCCACTGCTCATCCATCAAATTTCATTGGTGAGTTCGTTTCCAAGTATCCTTTCCTTTTTTTTTCTATTGTCATCTTTAGTATGTCGTTTCTATCCCTCACTCTATTCTCTTCGTATGATCTGCTCGTAAAGACTAGAACGTGACCGATCTCCAACCTTGAGTGTTTGGTTTCACGTACACCGATCTCATATAACGGTGAGTTTTCATACTCTTTGTACCTTTACTTTCATTTTAATTAGCTTATATTCAGTATGTACTTATGTAATCATTTTGCCCATTTCCGTTCTCTCGTTTCAGGTTCGATTGAAAACAACCATTGTATTCGAGGTTTGTTTTCGGTTTAAATCGCTTAATACATTCATGTAATTTATGTATATATTTTTTTTGGGACATTAGGGACTTGTTTATTTATGGTATTTACTTTCGGACTTTTTCCTTCACGTATTTTCCTTCTGCACGTTATAGTGTTGCACCTTATTATGAAATACGATGTTCGTTAAACTGTGTTCGATGCATATTCCATGTGTAATATTTGCTTACGTAGGAAAAAAAATATAAACTTCAAAAATTTGGTTTCAAATGTAAAAAAGAAGTTGAGTATAATGTTCATTAAAAAGGTTATTATAAATTTCAAAAAAGTTGATTGAAAATTATGTTTTTAAAATTTTGTTCATTAAGAAGTTGATTAATTGTGATTATAAAGTTAAAAAAGTTGATTAACTATCAGTTTTTAAAATTTCGTTGATTAAAAAAAGTTGGTTAGAAAGTTGAATAATGGTGATTATGAAGCTAAAAAAATGATTAGAACTTCTGTTTAAAGAATTTTGGTCATTAAAAAGTTGATTAATTGTGATTGTAAAGTTAAAAAGGTTGATTAACTATTCTGTTTTTAAAATTTTGTTGATTAAAACAAGTTGGTTAGAAAGTTGAATAATGGTGATTATAAAGCTAAAAAAAGTTGATTAGAATTTCTGTTTTAATAATTTGGTTCATTAAAAAGTTGAATAATGGTGATTATAAATCTAAAAAAAGTTGATTAGAAATTCCGTTTTAAGAATTTGGTTCATTAAGAAGTTGATTAATTGTGATTATAAATTTAAAAAAAGTTGATTAAAAATTCTGTTCTTAAGATTTTTTTCATTAAAAAGTTGGTTAATGGTGATCATAACGTTAAAAAAGTTGATGAAAAATTCTGTTTTAAGAATTTCGGTTCATTAAATAGTTGATTAATGGTGATTATAAAGTTTTAAAAAGTTGATTAATAATTCTGTTTTCAACATTTTGTTCATCAAAAAAAGTTAATTTAAAATTCTGGTTTTAAAATTTTGATTATTAAAAGTTGGTTAGAAAGTTGACTAATGTTGATTATAAATTTAAAAATAGTTGATTAAAATTTTCCTCTCGTGGAAAAAAAAAGACATTTTTTTTCAATAATGTTGAATTAAATTTTTTTGTAAACAATTGAAATCCCACTCCTACTTAAATGCATTTTCACTTTTAAAATGACAGAATTTTCCCCAATAAGATAGTTATTACTTATGAAAATGTTGACTTACAAATTCAAAACTATTTTAAAAAGTAGATTACAAGGAATATGTTTCTTGAGTAATAATGTTTTTTAAACGGGGTTAATAATATATAGATAGTTTTAGACTATATAGACAAATCTTTTGTTTATAAATTTAGGGAAACAATCAGTTATATACGAAATCAATGAACAAGAAATGGGTTAAGAAGCATGAATTTGACCTCATTCATGAATCTTCAATTACATTGTCCAATAGATTAAGTTTTATGATGTTTTATTTATTTAGTACTATCTTGACACTTAATTTGAAGCACATAATCTGAGTTCCTCCTATAAAAACAATAAACTGGTGTATCAAAACCACTATTCCGTTTCATAATTTTTGTTTCTTTTTAATTTTGTTTAACTCTTTTTTAAAAATTAAACGTATAAAGCTACACGTATGTACCATAAACAGATCGAAACCAAAACCCTACATCCTAAACATATATAACCCTAAACCCTAAACACATGAAAACCTATAAACACATAAAACCCTAAACCCTAAAACCCAAATACCTAAACACATGAAAACCTAAACCCTAAACACATAAAACCCTAAACCCTAAACCGAAAACACTGAACCCTAATCCCTAAACACATAAAACCCTAAACCCTAAAACCCTAAACCCTAATACCTAAACACATAAAACTCTAAACCCTAAACACATGAAAACCTAAACCGTACCCTAAACACATAAAACCCTAAGCTGATGGAATTATAAACCCTAAAAACATGAAACCCTAAACTTTTGGTACCATAATCCGTAAAACATGAAACCCTAAATGCATGAAATCATAAACCGAAAAACACGTCTTTCTTATAGACGAAGGTGACTGCTTGACTTCTTATATTTTGAATAATAGGAGTATGGGGACATCAAAATTCTATGTGGTGTTTGCTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGAATGCCACAAACAAGTGAACCAATTTAGGGGAGCACTACACAAGTTGTATGCAACATGTGCAGAAGCAGAGTATGCATTTAGGCATTATGTAATGGTGACTAGTGGCCAAGCAAACTTCACTGATCAACAACAAGTGTGTCGTAACCTCCCCGTTATGGGATATGGGTCATGTAGAAAAATGGTACAGTATTAG

mRNA sequence

ATGTTGGTGTGCAACTGCTGCAAAGAAGCTCTTGGATTGCATGCTTATCTTCTTCGGTTTCGGAGGGACGTTCGATTTAAGATTTGTGATCTCCTCTCAGATCTGTCTTCTCCTCGCTCCCTCTTCATGAATCTGAGATCCCACCTCATGCCGCTTCAACTTGTCGCAGCTGTCGACGTTCGATTCGGGATCCGCATGTTCATGCACATGGTTCTGTCCATATTTTTAACTTCTCATTTGTGTTGTTCATGCTCATGGTTCTGTCCATATTTTGTACTTCTCATGAGTATGGGGACATCAAAATTCTATGTGGTGTTTGCTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGAATGCCACAAACAAGTGAACCAATTTAGGGGAGCACTACACAAGTTGTATGCAACATGTGCAGAAGCAGAGTATGCATTTAGGCATTATGTAATGGTGACTAGTGGCCAAGCAAACTTCACTGATCAACAACAAGTGTGTCGTAACCTCCCCGTTATGGGATATGGGTCATGTAGAAAAATGGTACAGTATTAG

Coding sequence (CDS)

ATGTTGGTGTGCAACTGCTGCAAAGAAGCTCTTGGATTGCATGCTTATCTTCTTCGGTTTCGGAGGGACGTTCGATTTAAGATTTGTGATCTCCTCTCAGATCTGTCTTCTCCTCGCTCCCTCTTCATGAATCTGAGATCCCACCTCATGCCGCTTCAACTTGTCGCAGCTGTCGACGTTCGATTCGGGATCCGCATGTTCATGCACATGGTTCTGTCCATATTTTTAACTTCTCATTTGTGTTGTTCATGCTCATGGTTCTGTCCATATTTTGTACTTCTCATGAGTATGGGGACATCAAAATTCTATGTGGTGTTTGCTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGAATGCCACAAACAAGTGAACCAATTTAGGGGAGCACTACACAAGTTGTATGCAACATGTGCAGAAGCAGAGTATGCATTTAGGCATTATGTAATGGTGACTAGTGGCCAAGCAAACTTCACTGATCAACAACAAGTGTGTCGTAACCTCCCCGTTATGGGATATGGGTCATGTAGAAAAATGGTACAGTATTAG

Protein sequence

MLVCNCCKEALGLHAYLLRFRRDVRFKICDLLSDLSSPRSLFMNLRSHLMPLQLVAAVDVRFGIRMFMHMVLSIFLTSHLCCSCSWFCPYFVLLMSMGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVTSGQANFTDQQQVCRNLPVMGYGSCRKMVQY
Homology
[Close]
BLAST of Lcy12g003100 vs. ExPASy Swiss-Prot
Match: Q9KEI9 (Ribonuclease H OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rnhA PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-08
Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFR 147
           M  SK+YVV+ GR PGIYTSW  C  QV  + GA  K Y +  EAE AFR
Sbjct: 1   MAKSKYYVVWNGRKPGIYTSWSACEAQVKGYTGAKFKSYPSKEEAEAAFR 50

[Close]
BLAST of Lcy12g003100 vs. ExPASy Swiss-Prot
Match: Q07762 (Ribonuclease H OS=Crithidia fasciculata OX=5656 GN=RNH1 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-04
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 102 FYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEA 142
           FYVV  GR  GIY++W +C +QV  F GA++K + T +EA
Sbjct: 156 FYVVAVGRQRGIYSTWDQCSEQVKGFSGAVYKSFRTLSEA 195

[Close]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match: A0A445EFW3 (Cauli_VI domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g009104 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-08
Identity = 33/76 (43.42%), Postives = 41/76 (53.95%), Query Frame = 0 

Query: 93  LLMSMGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVT 152
           L M     K+YVVF GR PGIY+SW  CH QVN+F G LHK Y T  EA  AF  ++   
Sbjct: 299 LNMVRAKKKYYVVFLGRVPGIYSSWPACHSQVNEFSGNLHKSYKTFDEARMAFEQFLSAR 358

Query: 153 SGQANFTDQQQVCRNL 169
             Q   T+   +   +
Sbjct: 359 RLQTQLTNNSPLVHQI 374

[Close]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match: A0A2W1L8J3 (Ribonuclease H OS=Paenibacillus sambharensis OX=1803190 GN=DNH61_18895 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-08
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVTSGQA 156
           M  SK+YVV+AG  PGIYTSW EC KQVN+F  A  K Y + AEAE AF+       GQ 
Sbjct: 1   MAQSKYYVVWAGHKPGIYTSWAECQKQVNKFPQAKFKSYGSQAEAEKAFKEGAGAHWGQG 60

Query: 157 N 158
           +
Sbjct: 61  S 61

[Close]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match: B3JKA8 (Ribonuclease H OS=Bacteroides coprocola DSM 17136 OX=470145 GN=BACCOP_02337 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0 

Query: 85  SWFCPYFVLLMSMGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYA 144
           +WF    ++ +     KFYVV+ G  PGIYTSW +C  Q+  ++GA++K +AT  EAE+A
Sbjct: 3   NWFIDIAIIQIMAKQQKFYVVWKGAEPGIYTSWTDCQLQIKNYKGAIYKSFATREEAEHA 62

Query: 145 F 146
           F
Sbjct: 63  F 63

[Close]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match: A0A7U6ARX6 (Ribonuclease H OS=Paenibacillus sp. Cedars OX=1980674 GN=B9D94_02900 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVTSGQA 156
           M   KFYVV+ G+ PGIYTSW EC +QVNQF GA  K + + +EAE A+       +G  
Sbjct: 1   MAKQKFYVVWVGKVPGIYTSWAECQQQVNQFTGAKFKAFESRSEAEKAY------AAGYK 60

Query: 157 NFTDQQ 163
           N+  QQ
Sbjct: 61  NYWGQQ 60

[Close]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match: A0A163HJQ5 (Ribonuclease H OS=Paenibacillus glucanolyticus OX=59843 GN=AWU65_06070 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVTSGQA 156
           M   KFYVV+ G+ PGIYTSW EC +QVNQF GA  K + + +EAE A+       +G  
Sbjct: 1   MAKQKFYVVWVGKVPGIYTSWAECQQQVNQFTGAKFKAFESRSEAEKAY------AAGYK 60

Query: 157 NFTDQQ 163
           N+  QQ
Sbjct: 61  NYWGQQ 60

[Close]
BLAST of Lcy12g003100 vs. NCBI nr
Match: WP_138879431.1 (ribonuclease H family protein [Paenibacillus mesophilus] >TMV50118.1 ribonuclease H [Paenibacillus mesophilus])

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-08
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVTSGQA 156
           M  +K+YVV+ GR PGIYTSW EC KQVNQF+GA  K + T AEAE A+      + GQA
Sbjct: 1   MANTKYYVVWVGRKPGIYTSWPECQKQVNQFQGAKFKSFETKAEAEKAYTAGWSASWGQA 60

Query: 157 N 158
           +
Sbjct: 61  S 61

[Close]
BLAST of Lcy12g003100 vs. NCBI nr
Match: RYR74402.1 (hypothetical protein Ahy_A02g009104 [Arachis hypogaea])

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-08
Identity = 33/76 (43.42%), Postives = 41/76 (53.95%), Query Frame = 0 

Query: 93  LLMSMGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFRHYVMVT 152
           L M     K+YVVF GR PGIY+SW  CH QVN+F G LHK Y T  EA  AF  ++   
Sbjct: 299 LNMVRAKKKYYVVFLGRVPGIYSSWPACHSQVNEFSGNLHKSYKTFDEARMAFEQFLSAR 358

Query: 153 SGQANFTDQQQVCRNL 169
             Q   T+   +   +
Sbjct: 359 RLQTQLTNNSPLVHQI 374

[Close]
BLAST of Lcy12g003100 vs. NCBI nr
Match: WP_080833399.1 (MULTISPECIES: ribonuclease H family protein [Cohnella] >MBN2981868.1 ribonuclease H family protein [Cohnella algarum])

HSP 1 Score: 68.9 bits (167), Expect = 5.0e-08
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFR 147
           M  SKFYVV+AGRNPGIY SW EC KQ+ +F  A +K Y + AEAE AF+
Sbjct: 1   MAKSKFYVVWAGRNPGIYASWPECRKQIEKFEDARYKSYESRAEAEKAFK 50

[Close]
BLAST of Lcy12g003100 vs. NCBI nr
Match: WP_019007846.1 (ribonuclease H family protein [Cohnella laeviribosi])

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-07
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFR 147
           M   K+YVV+AGRNPGIY SW EC KQ+ +F GA +K + + AEAE AFR
Sbjct: 1   MAKPKYYVVWAGRNPGIYESWPECRKQIEKFEGAKYKSFESRAEAEAAFR 50

[Close]
BLAST of Lcy12g003100 vs. NCBI nr
Match: REK68314.1 (ribonuclease H [Cohnella sp.])

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-07
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 97  MGTSKFYVVFAGRNPGIYTSWVECHKQVNQFRGALHKLYATCAEAEYAFR 147
           M   K+YVV+AGRNPGIY SW EC KQ+ +F GA +K + + AEAE AFR
Sbjct: 1   MAKPKYYVVWAGRNPGIYESWPECRKQIEKFEGAKYKSFESRAEAEAAFR 50

The following BLAST results are available for this feature:
BLAST of Lcy12g003100 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9KEI96.8e-0856.00Ribonuclease H OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 73... [more]
Q077622.0e-0450.00Ribonuclease H OS=Crithidia fasciculata OX=5656 GN=RNH1 PE=3 SV=1[more]
BLAST of Lcy12g003100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A445EFW31.9e-0843.42Cauli_VI domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g009104... [more]
A0A2W1L8J37.1e-0854.10Ribonuclease H OS=Paenibacillus sambharensis OX=1803190 GN=DNH61_18895 PE=3 SV=1[more]
B3JKA82.1e-0744.26Ribonuclease H OS=Bacteroides coprocola DSM 17136 OX=470145 GN=BACCOP_02337 PE=3... [more]
A0A7U6ARX62.7e-0748.48Ribonuclease H OS=Paenibacillus sp. Cedars OX=1980674 GN=B9D94_02900 PE=4 SV=1[more]
A0A163HJQ52.7e-0748.48Ribonuclease H OS=Paenibacillus glucanolyticus OX=59843 GN=AWU65_06070 PE=3 SV=1[more]
BLAST of Lcy12g003100 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_138879431.11.3e-0855.74ribonuclease H family protein [Paenibacillus mesophilus] >TMV50118.1 ribonucleas... [more]
RYR74402.13.8e-0843.42hypothetical protein Ahy_A02g009104 [Arachis hypogaea][more]
WP_080833399.15.0e-0862.00MULTISPECIES: ribonuclease H family protein [Cohnella] >MBN2981868.1 ribonucleas... [more]
WP_019007846.11.1e-0760.00ribonuclease H family protein [Cohnella laeviribosi][more]
REK68314.11.1e-0760.00ribonuclease H [Cohnella sp.][more]
BLAST of Lcy12g003100 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037056Ribonuclease H1, N-terminal domain superfamilyGENE3D3.40.970.10coord: 98..147
e-value: 3.9E-17
score: 64.2
IPR011320Ribonuclease H1, N-terminalPFAMPF01693Cauli_VIcoord: 101..142
e-value: 1.4E-15
score: 57.3
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 101..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g003100.1Lcy12g003100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004518 nuclease activity