Lcy12g002590 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g002590
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	Chr12: 7346122 .. 7346706 (-)
RNA-Seq Expression	Lcy12g002590
Synteny	Lcy12g002590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTCCAACACGATGGAATTCAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAGAGGAACATGACCCAAGATATTTGCCAGAAGGTGAGATACCTATTATTGAAGATTGGGATAATGCTAAAGTGTTTGTGGAGTTCTTGAAGACTTTTTTAGATGTTACTTTAAAGTTCTCAGCATCTATGTCCGTAACTTCAAAGATTTTCTTTCATGAAATTTTGTTGGTTGAAGAAATAATTCGTGAATACTCGATGTATAAGAATGAGTTGTTAAGTCAGATGGCATCAAGCATGCAAGCAAAATTCAACAAATATTGGAGTATAACTACAAGTGACAAAACTAATTTGTTGTTGTATGTTGCTATTGTTCTTGACCCTAGATATAAGTTGAATTATGTGAGTTATTGCTTTCATGATTTTTTGGATGAGAAAGTGCAAAAAAAATGGACAAATAAGGTCGAAAAAACATTGCGTCGACTATGTGATGACTATTATTTAAGAATATCAGTGCAAAAGGAACAACATCCACAAGCACAATCATCTACATCCATAGAAGCATAA

mRNA sequence

ATGGATGTTCCAACACGATGGAATTCAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAGAGGAACATGACCCAAGATATTTGCCAGAAGGTGAGATACCTATTATTGAAGATTGGGATAATGCTAAAGTGTTTGTGGAGTTCTTGAAGACTTTTTTAGATGTTACTTTAAAGTTCTCAGCATCTATGTCCGTAACTTCAAAGATTTTCTTTCATGAAATTTTGTTGGTTGAAGAAATAATTCGTGAATACTCGATGTATAAGAATGAGTTGTTAAGTCAGATGGCATCAAGCATGCAAGCAAAATTCAACAAATATTGGAGTATAACTACAAGTGACAAAACTAATTTGTTGTTGTATGTTGCTATTGTTCTTGACCCTAGATATAAGTTGAATTATGTGAGTTATTGCTTTCATGATTTTTTGGATGAGAAAGTGCAAAAAAAATGGACAAATAAGGTCGAAAAAACATTGCGTCGACTATGTGATGACTATTATTTAAGAATATCAGTGCAAAAGGAACAACATCCACAAGCACAATCATCTACATCCATAGAAGCATAA

Coding sequence (CDS)

ATGGATGTTCCAACACGATGGAATTCAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAGAGGAACATGACCCAAGATATTTGCCAGAAGGTGAGATACCTATTATTGAAGATTGGGATAATGCTAAAGTGTTTGTGGAGTTCTTGAAGACTTTTTTAGATGTTACTTTAAAGTTCTCAGCATCTATGTCCGTAACTTCAAAGATTTTCTTTCATGAAATTTTGTTGGTTGAAGAAATAATTCGTGAATACTCGATGTATAAGAATGAGTTGTTAAGTCAGATGGCATCAAGCATGCAAGCAAAATTCAACAAATATTGGAGTATAACTACAAGTGACAAAACTAATTTGTTGTTGTATGTTGCTATTGTTCTTGACCCTAGATATAAGTTGAATTATGTGAGTTATTGCTTTCATGATTTTTTGGATGAGAAAGTGCAAAAAAAATGGACAAATAAGGTCGAAAAAACATTGCGTCGACTATGTGATGACTATTATTTAAGAATATCAGTGCAAAAGGAACAACATCCACAAGCACAATCATCTACATCCATAGAAGCATAA

Protein sequence

MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFLDVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSDKTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQKEQHPQAQSSTSIEA

Homology

[Close]

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 50/172 (29.07%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           +DV T+WN+T+ ML  A+ +++ F  LE  D  Y    E P  EDW   +    +LK   
Sbjct: 398 LDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNY---NEAPSAEDWKKVEAACNYLKLLY 457

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           D      A+ + TS +FFHE   ++  +   + +++ + S +A  M  +F+KYW      
Sbjct: 458 DSAHSIMAAANPTSNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHERFDKYWK----- 517

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDY 173
             NL+L +A+V+DPR+K+  V + +      +   K+   V+  +  L  +Y
Sbjct: 518 DCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEA-AKYVKVVDDAVHELYKEY 560

[Close]

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-17
Identity = 50/172 (29.07%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           +DV T+WN+T+ ML  A+ +++ F  LE  D  Y    E P  EDW   +    +LK   
Sbjct: 398 LDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNY---NEAPSAEDWKKVEAACNYLKLLY 457

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           D      A+ + TS +FFHE   ++  +   +  ++ + S +A  M  +F+KYW      
Sbjct: 458 DSAHSIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHERFDKYWK----- 517

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDY 173
             NL+L +A+V+DPR+K+  V + +      +   K+   V+  +  L ++Y
Sbjct: 518 DCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEA-AKYVKVVDDAVHELYNEY 560

[Close]

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 51/183 (27.87%), Postives = 87/183 (47.54%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           +DV T+WN+T+ ML  A+ +Q+ F  LE  D  Y    E P  EDW   +    +L    
Sbjct: 439 LDVTTQWNTTYLMLLAALDYQQVFASLETCDGDY---NEAPSTEDWKKVEAACSYLSLLY 498

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           D      A+ + TS IFFHE   ++  +     +++ +    A  M  +F+KYW      
Sbjct: 499 DSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDPIFRSTAKIMHERFDKYWK----- 558

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
             NL+L +A+V+DPR+K+  V + +   +      K+   V+  +  L  +Y  +    +
Sbjct: 559 DCNLVLAIAVVMDPRFKMKLVEFSYSK-IHSVEAAKYVKVVDDAIHELYSEYATQGEANR 612

Query: 181 EQH 184
           + H
Sbjct: 619 DAH 612

[Close]

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-16
Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 2   DVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFLD 61
           DV TRWNST+ ML  A+ ++    RL+  DPR   +   P  E+W  A    + LK F D
Sbjct: 459 DVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRY-DAICPKAEEWKMALTLFKCLKKFFD 518

Query: 62  VTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSDK 121
           +T   S +   T+ +F+     ++++I ++ +++  ++ +MA +M  KF KYW +     
Sbjct: 519 LTELLSGTQYSTANLFYKGFCEIKDLIDQWCVHEKFVIRRMAVAMSEKFEKYWKV----- 578

Query: 122 TNLLLYVAIVLDPRYKLNYVSYCFHDF 149
           +N+ L VA  LDPRYK   + +    F
Sbjct: 579 SNIALAVACFLDPRYKKILIEFYMKKF 599

[Close]

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 46/172 (26.74%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           +D  T+WN+T+ ML  A + ++ F  L+  DP Y    + P  EDW + +    FLK   
Sbjct: 393 LDDQTQWNTTYMMLVAASELKEVFSCLDTADPDY---KKPPSAEDWRHVEALCTFLKPLF 452

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +      ++ + ++  FFHE+   +  +      ++  ++ +A +MQ K +KYW      
Sbjct: 453 EAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWR----- 512

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDY 173
             +L+L +A+V+DPR+K+  V + F     E   K     V+  +  L  +Y
Sbjct: 513 DCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN-IKTVDDGIHELFTEY 555

[Close]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL
Match: E5GB32 (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIK QKTFERLEEHDP YLP+ +IP  EDWDNAKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +VT+KFSASMSVTS IFFHE+ L++EIIREYS Y+N LLSQM  SMQ KFNKYW ITTS+
Sbjct: 61  EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV++VLDPRYKL YV+YCF++FL+E   K WTNKVE+  RRLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIK QKTFERLEEHDP YLP+ +IP  EDWDNAKVFV+FLKTF 
Sbjct: 334 MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 393

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +VT+KFSASMSVTS IFFHE+ L++EIIREYS Y+N LLSQM  SMQ KFNKYW ITTS+
Sbjct: 394 EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 453

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV++VLDPRYKL YV+YCF++FL+E   K WTNKVE+  RRLCDDYY+R+S  K
Sbjct: 454 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMS--K 513

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 514 EKYSQTQSCTPIE 524

[Close]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL
Match: A0A6J1DPH4 (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charantia OX=3673 GN=LOC111022309 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIKF++TFERLE+HD  Y+ EG+ P  EDWDNA+VFV FLK F 
Sbjct: 177 MDVPTRWNSTFTMLDGAIKFKRTFERLEDHDRNYIAEGDRPTNEDWDNARVFVGFLKIFS 236

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           DVTLKFSASMSVTS IFFHE+ LV+E IREYS+YKN LLS+MA  MQ KFNKYW +TTS+
Sbjct: 237 DVTLKFSASMSVTSNIFFHEVCLVQETIREYSLYKNYLLSKMALRMQTKFNKYWGVTTSE 296

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           K NLLLYVA+V DPRYKLNYVSYCFH+FL+E+    WTNKVE TLR+LCDDYY R+SV K
Sbjct: 297 KINLLLYVAVVFDPRYKLNYVSYCFHEFLEEESANLWTNKVEATLRQLCDDYYTRLSVTK 356

Query: 181 EQHPQAQSS 190
           E H Q QS+
Sbjct: 357 EYHSQTQST 365

[Close]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL
Match: A0A1S4DU07 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFT+LDGAIK QKTFERL+EHDP YLP  +IP +EDWD+AKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
            VT+KFSASM VT  IFF+E+ L++EIIREYS Y+N LLSQM  +MQ KFNKYW +TTS+
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV +VLD RYKL YV+YCF++FL++   K WTNK+E+   RLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL
Match: A0A1S4DU44 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFT+LDGAIK QKTFERL+EHDP YLP  +IP +EDWD+AKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
            VT+KFSASM VT  IFF+E+ L++EIIREYS Y+N LLSQM  +MQ KFNKYW +TTS+
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV +VLD RYKL YV+YCF++FL++   K WTNK+E+   RLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 5.4e-77
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIK QKTFERLEEHDP YLP+ +IP  EDWDNAKVFV+FLKTF 
Sbjct: 334 MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 393

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +VT+KFSASMSVTS IFFHE+ L++EIIREYS Y+N LLSQM  SMQ KFNKYW ITTS+
Sbjct: 394 EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 453

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV++VLDPRYKL YV+YCF++FL+E   K WTNKVE+  RRLCDDYY+R+S  K
Sbjct: 454 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMS--K 513

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 514 EKYSQTQSCTPIE 524

[Close]

BLAST of Lcy12g002590 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 298.1 bits (762), Expect = 5.4e-77
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIK QKTFERLEEHDP YLP+ +IP  EDWDNAKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +VT+KFSASMSVTS IFFHE+ L++EIIREYS Y+N LLSQM  SMQ KFNKYW ITTS+
Sbjct: 61  EVTMKFSASMSVTSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV++VLDPRYKL YV+YCF++FL+E   K WTNKVE+  RRLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. NCBI nr
Match: XP_022155174.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 6.0e-76
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFTMLDGAIKF++TFERLE+HD  Y+ EG+ P  EDWDNA+VFV FLK F 
Sbjct: 177 MDVPTRWNSTFTMLDGAIKFKRTFERLEDHDRNYIAEGDRPTNEDWDNARVFVGFLKIFS 236

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           DVTLKFSASMSVTS IFFHE+ LV+E IREYS+YKN LLS+MA  MQ KFNKYW +TTS+
Sbjct: 237 DVTLKFSASMSVTSNIFFHEVCLVQETIREYSLYKNYLLSKMALRMQTKFNKYWGVTTSE 296

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           K NLLLYVA+V DPRYKLNYVSYCFH+FL+E+    WTNKVE TLR+LCDDYY R+SV K
Sbjct: 297 KINLLLYVAVVFDPRYKLNYVSYCFHEFLEEESANLWTNKVEATLRQLCDDYYTRLSVTK 356

Query: 181 EQHPQAQSS 190
           E H Q QS+
Sbjct: 357 EYHSQTQST 365

[Close]

BLAST of Lcy12g002590 vs. NCBI nr
Match: XP_016899473.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 3.8e-70
Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFT+LDGAIK QKTFERL+EHDP YLP  +IP +EDWD+AKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
            VT+KFSASM VT  IFF+E+ L++EIIREYS Y+N LLSQM  +MQ KFNKYW +TTS+
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV +VLD RYKL YV+YCF++FL++   K WTNK+E+   RLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 3.8e-70
Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           MDVPTRWNSTFT+LDGAIK QKTFERL+EHDP YLP  +IP +EDWD+AKVFV+FLKTF 
Sbjct: 1   MDVPTRWNSTFTILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFS 60

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
            VT+KFSASM VT  IFF+E+ L++EIIREYS Y+N LLSQM  +MQ KFNKYW +TTS+
Sbjct: 61  GVTMKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSE 120

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDYYLRISVQK 180
           KTNLLLYV +VLD RYKL YV+YCF++FL++   K WTNK+E+   RLCDDYY+R+S  K
Sbjct: 121 KTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMS--K 180

Query: 181 EQHPQAQSSTSIE 194
           E++ Q QS T IE
Sbjct: 181 EKYSQTQSCTPIE 191

[Close]

BLAST of Lcy12g002590 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14
Identity = 46/172 (26.74%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 1   MDVPTRWNSTFTMLDGAIKFQKTFERLEEHDPRYLPEGEIPIIEDWDNAKVFVEFLKTFL 60
           +D  T+WN+T+ ML  A + ++ F  L+  DP Y    + P  EDW + +    FLK   
Sbjct: 393 LDDQTQWNTTYMMLVAASELKEVFSCLDTADPDY---KKPPSAEDWRHVEALCTFLKPLF 452

Query: 61  DVTLKFSASMSVTSKIFFHEILLVEEIIREYSMYKNELLSQMASSMQAKFNKYWSITTSD 120
           +      ++ + ++  FFHE+   +  +      ++  ++ +A +MQ K +KYW      
Sbjct: 453 EAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWR----- 512

Query: 121 KTNLLLYVAIVLDPRYKLNYVSYCFHDFLDEKVQKKWTNKVEKTLRRLCDDY 173
             +L+L +A+V+DPR+K+  V + F     E   K     V+  +  L  +Y
Sbjct: 513 DCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN-IKTVDDGIHELFTEY 555

The following BLAST results are available for this feature:

BLAST of Lcy12g002590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	2.9e-17	29.07	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	5.0e-17	29.07	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.9e-16	27.87	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P08770	7.2e-16	32.65	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
Q9M2N5	5.7e-13	26.74	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]

BLAST of Lcy12g002590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GB32	2.6e-77	75.13	Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
D0UIX2	2.6e-77	75.13	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A6J1DPH4	2.9e-76	74.60	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charan...	[more]
A0A1S4DU07	1.8e-70	68.91	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum...	[more]
A0A1S4DU44	1.8e-70	68.91	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucum...	[more]

BLAST of Lcy12g002590 vs. NCBI nr


Match Name	E-value	Identity	Description
ACX85638.1	5.4e-77	75.13	putative transposase [Cucumis melo]	[more]
ADN33674.1	5.4e-77	75.13	transposase [Cucumis melo subsp. melo]	[more]
XP_022155174.1	6.0e-76	74.60	zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charanti...	[more]
XP_016899473.1	3.8e-70	68.91	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899471.1	3.8e-70	68.91	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]

BLAST of Lcy12g002590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	4.1e-14	26.74	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 67..172 e-value: 7.4E-24 score: 83.9
None	No IPR available	PANTHER	PTHR23272:SF130	OS01G0698300 PROTEIN	coord: 1..182
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..182
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g002590.1	Lcy12g002590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity