Lcy12g002220 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g002220
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr12: 5823139 .. 5825277 (-)
RNA-Seq Expression	Lcy12g002220
Synteny	Lcy12g002220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCTTCCTCTTCTCAATACATCCTCAGGGGTCTTTCTATATATAAGCTCCAAACATTCATACCTAAACAATGGAAAAATGTACCTGTGAGCAATGGTAGTGAATTTATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTATCTAAAGCATTTGAAGCCTTCTCCCTCATTCAATTGCGCGCTTGTTATAATGATTCATTTGACCTCATCTTGCAATCCATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCGCATCATCTCGTCGGGTCTTGAGCAAGACTCCGTTTTGGTCCCCAAGCTTGTCACATTCTATTCGAGCTTTAAACTTCTGGCCGAGGCTCATTCCCTTGTTGAGAATTCTAATTTATTTCACCCTTGTCCTTGGAATCTACTCATTACATCATATGTCAAAAATGAACTGCATGAGGCGGCCATTTTAGCTTATAAACAGATGCTGACGAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTGAAGGCATGTGGTGAAACACAGAATTTGGGATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACTAAATGGAGTTTGTTTGTTCAGAATGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTCGACCGGGATGCAGTATCTTGGAATTCAATGATTTCTTGTTATGCCTCCAAGGGTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGAAAGTGCGTTGAAATTAATATTGTAACTTGGAATATTATAGCCGGAGGTTGCCTGCGAGTTGGTAATTTTACTCGGACACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTGTTCATTTGGACAATGTAGCAATGATAATAGGTTTAGGTGCTTGTTCTCACATTGGTGCAATTAGATTGGGAAAAGAAATCCATGGCTTTACTATCAGACATTGTTATCATAGGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCGTATATTTTATTTCGATTAAATGACGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACATTTGGACCGAGTTGAGGATGCCTTGCATCTGTTTAGAGAATTATTACTATTTGGAGTAGAACCCAATTATGTGACATTTGCCAGCATTCTTCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCACTGCTATATTACTAAACGTGAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGACATGTATGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTGTTTGATTCATTAAGCAAGAAGGATGAAGTGACATATACTTCCCTGATTGCAGGCTATGGTATGCAAGGAGAGGGGAGCAAAGCGCTAAGACTATTTGAAGAGATGAAAATGTTTCAGATCAAACCAGATCATATAACTATGGTTGCTGTCCTATCAGCTTGTAGTCATTCAGGTCTCCTGAAACAAGGTGAACATTTATTTGCAGAGATGCAAAGTGTGCATGGTCTAAGTCCGCATTTGGAGCACTATGCTTGCATGGCTGACCTTTATGGGAGGGTTGGTCTGTTGAACAGAGCCAAGGGGATTATCACAAGAATGCCTTATAGACCAACATCTGCTATGTGGGCCACTCTTATAGGAGCTTGTTGCATCCATGGAAACACAGATATTGGGGAATGGGCGGCAGAGAAACTTCTGGAAATGCGGCCTGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGTTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTGGCAAAAGCTCCTGGTTGTTCTTGGGTTGATATTGGCTCAGGATTCGTCTCATTCTTGGTTGGGGACACGTCTAATCCTCAAGCCCTTGAATCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAATCTAGTGACGACAGATTATTACAATATTGGTGATGACATTTCTTGA

mRNA sequence

ATGTCATCTTCCTCTTCTCAATACATCCTCAGGGGTCTTTCTATATATAAGCTCCAAACATTCATACCTAAACAATGGAAAAATGTACCTGTGAGCAATGGTAGTGAATTTATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTATCTAAAGCATTTGAAGCCTTCTCCCTCATTCAATTGCGCGCTTGTTATAATGATTCATTTGACCTCATCTTGCAATCCATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCGCATCATCTCGTCGGGTCTTGAGCAAGACTCCGTTTTGGTCCCCAAGCTTGTCACATTCTATTCGAGCTTTAAACTTCTGGCCGAGGCTCATTCCCTTGTTGAGAATTCTAATTTATTTCACCCTTGTCCTTGGAATCTACTCATTACATCATATGTCAAAAATGAACTGCATGAGGCGGCCATTTTAGCTTATAAACAGATGCTGACGAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTGAAGGCATGTGGTGAAACACAGAATTTGGGATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACTAAATGGAGTTTGTTTGTTCAGAATGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTCGACCGGGATGCAGTATCTTGGAATTCAATGATTTCTTGTTATGCCTCCAAGGGTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGAAAGTGCGTTGAAATTAATATTGTAACTTGGAATATTATAGCCGGAGGTTGCCTGCGAGTTGGTAATTTTACTCGGACACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTGTTCATTTGGACAATGTAGCAATGATAATAGGTTTAGGTGCTTGTTCTCACATTGGTGCAATTAGATTGGGAAAAGAAATCCATGGCTTTACTATCAGACATTGTTATCATAGGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCGTATATTTTATTTCGATTAAATGACGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACATTTGGACCGAGTTGAGGATGCCTTGCATCTGTTTAGAGAATTATTACTATTTGGAGTAGAACCCAATTATGTGACATTTGCCAGCATTCTTCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCACTGCTATATTACTAAACGTGAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGACATGTATGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTGTTTGATTCATTAAGCAAGAAGGATGAAGTGACATATACTTCCCTGATTGCAGGCTATGGTATGCAAGGAGAGGGGAGCAAAGCGCTAAGACTATTTGAAGAGATGAAAATGTTTCAGATCAAACCAGATCATATAACTATGGTTGCTGTCCTATCAGCTTGTAGTCATTCAGGTCTCCTGAAACAAGGTGAACATTTATTTGCAGAGATGCAAAGTGTGCATGGTCTAAGTCCGCATTTGGAGCACTATGCTTGCATGGCTGACCTTTATGGGAGGGTTGGTCTGTTGAACAGAGCCAAGGGGATTATCACAAGAATGCCTTATAGACCAACATCTGCTATGTGGGCCACTCTTATAGGAGCTTGTTGCATCCATGGAAACACAGATATTGGGGAATGGGCGGCAGAGAAACTTCTGGAAATGCGGCCTGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGTTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTGGCAAAAGCTCCTGGTTGTTCTTGGGTTGATATTGGCTCAGGATTCGTCTCATTCTTGGTTGGGGACACGTCTAATCCTCAAGCCCTTGAATCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAATCTAGTGACGACAGATTATTACAATATTGGTGATGACATTTCTTGA

Coding sequence (CDS)

ATGTCATCTTCCTCTTCTCAATACATCCTCAGGGGTCTTTCTATATATAAGCTCCAAACATTCATACCTAAACAATGGAAAAATGTACCTGTGAGCAATGGTAGTGAATTTATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTATCTAAAGCATTTGAAGCCTTCTCCCTCATTCAATTGCGCGCTTGTTATAATGATTCATTTGACCTCATCTTGCAATCCATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCGCATCATCTCGTCGGGTCTTGAGCAAGACTCCGTTTTGGTCCCCAAGCTTGTCACATTCTATTCGAGCTTTAAACTTCTGGCCGAGGCTCATTCCCTTGTTGAGAATTCTAATTTATTTCACCCTTGTCCTTGGAATCTACTCATTACATCATATGTCAAAAATGAACTGCATGAGGCGGCCATTTTAGCTTATAAACAGATGCTGACGAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTGAAGGCATGTGGTGAAACACAGAATTTGGGATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACTAAATGGAGTTTGTTTGTTCAGAATGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTCGACCGGGATGCAGTATCTTGGAATTCAATGATTTCTTGTTATGCCTCCAAGGGTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGAAAGTGCGTTGAAATTAATATTGTAACTTGGAATATTATAGCCGGAGGTTGCCTGCGAGTTGGTAATTTTACTCGGACACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTGTTCATTTGGACAATGTAGCAATGATAATAGGTTTAGGTGCTTGTTCTCACATTGGTGCAATTAGATTGGGAAAAGAAATCCATGGCTTTACTATCAGACATTGTTATCATAGGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCGTATATTTTATTTCGATTAAATGACGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACATTTGGACCGAGTTGAGGATGCCTTGCATCTGTTTAGAGAATTATTACTATTTGGAGTAGAACCCAATTATGTGACATTTGCCAGCATTCTTCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCACTGCTATATTACTAAACGTGAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGACATGTATGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTGTTTGATTCATTAAGCAAGAAGGATGAAGTGACATATACTTCCCTGATTGCAGGCTATGGTATGCAAGGAGAGGGGAGCAAAGCGCTAAGACTATTTGAAGAGATGAAAATGTTTCAGATCAAACCAGATCATATAACTATGGTTGCTGTCCTATCAGCTTGTAGTCATTCAGGTCTCCTGAAACAAGGTGAACATTTATTTGCAGAGATGCAAAGTGTGCATGGTCTAAGTCCGCATTTGGAGCACTATGCTTGCATGGCTGACCTTTATGGGAGGGTTGGTCTGTTGAACAGAGCCAAGGGGATTATCACAAGAATGCCTTATAGACCAACATCTGCTATGTGGGCCACTCTTATAGGAGCTTGTTGCATCCATGGAAACACAGATATTGGGGAATGGGCGGCAGAGAAACTTCTGGAAATGCGGCCTGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGTTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTGGCAAAAGCTCCTGGTTGTTCTTGGGTTGATATTGGCTCAGGATTCGTCTCATTCTTGGTTGGGGACACGTCTAATCCTCAAGCCCTTGAATCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAATCTAGTGACGACAGATTATTACAATATTGGTGATGACATTTCTTGA

Protein sequence

MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDIS

Homology

[Close]

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot
Match: Q9C9I6 (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E67 PE=2 SV=1)

HSP 1 Score: 827.8 bits (2137), Expect = 9.4e-239
Identity = 395/656 (60.21%), Postives = 502/656 (76.52%), Query Frame = 0


Query: 40  DSIFSSLKNFASHGQLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGK 99
           +S+F SL + ASHG L  AF+ FSL++L++    S DL+L S + LL +C +  +  +G 
Sbjct: 4   ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63

Query: 100 QLHGRIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNE 159
           Q+H   ISSG+E  SVLVPKLVTFYS+F L  EA S++ENS++ HP PWN+LI SY KNE
Sbjct: 64  QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123

Query: 160 LHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQN 219
           L E  I AYK+M++KG+RPD FT+PS+LKACGET ++ FG  VH SI   S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183

Query: 220 ALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEI 279
           ALISMY R   +  AR LFD M +RDAVSWN++I+CYAS+GMW EAFELFD M    VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243

Query: 280 NIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIH 339
           +++TWNII+GGCL+ GN+   L L+S+MRNF   LD VAMIIGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303

Query: 340 GFTIRHCYHRLSTVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVE 399
           G  I   Y  +  V+N L+TMY++CKD+ HA I+FR  ++ S+ TWNS++SG   L++ E
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363

Query: 400 DALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNAL 459
           +A HL RE+L+ G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423

Query: 460 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDH 519
           VD+YA+SGK++ AK+V D +SK+DEVTYTSLI GYG QGEG  AL LF+EM    IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483

Query: 520 ITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIIT 579
           +T+VAVLSACSHS L+ +GE LF +MQ  +G+ P L+H++CM DLYGR G L +AK II 
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543

Query: 580 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSK 639
            MPY+P+ A WATL+ AC IHGNT IG+WAAEKLLEM+PE+ GYYVLIANMYA AGSWSK
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603

Query: 640 LAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMK 696
           LA++RT+MRD GV K PGC+W+D  SGF  F VGDTS+P+A  +  LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659

[Close]

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot
Match: Q4V389 (Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E24 PE=2 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 1.9e-202
Identity = 347/665 (52.18%), Postives = 471/665 (70.83%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVP-------VSNGSEFMIDSIFSSLKNFASHG 60
           M SS S+ ILRGL++ ++  FIP+ WK +P        ++  E +   +F+S ++  SHG
Sbjct: 1   MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60

Query: 61  QLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQD 120
           QL +AF  FSL++ +   + S + +L S + LL +C   +    G+QLH   ISSGLE D
Sbjct: 61  QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120

Query: 121 SVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLT 180
           SVLVPKLVTFYS+F LL EA ++ ENS + HP PWN+LI SY++N+  + ++  YK+M++
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180

Query: 181 KGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDT 240
           KG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NALISMY R G+VD 
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240

Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLR 300
           AR LFD M +RDAVSWN++I+CY S+    EAF+L D M    VE +IVTWN IAGGCL 
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300

Query: 301 VGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHC--YHRLS 360
            GN+   L  +  MRN  V + +VAMI GL ACSHIGA++ GK  H   IR C   H + 
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360

Query: 361 TVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLF 420
            V+N+L+TMY+RC D+ HA+I+F+  +  S+ TWNS++SG  + +R E+   L +E+LL 
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420

Query: 421 GVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
           G  PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++ 
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480

Query: 481 AKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSH 540
           AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  F++M    IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540

Query: 541 SGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWA 600
           S L+++G  LF +M+ V G+   LEHY+CM DLY R G L++A+ I   +PY P+SAM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600

Query: 601 TLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDS 656
           TL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYAV GSWSKL  ++TL+ D 
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660

[Close]

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.2e-118
Identity = 227/674 (33.68%), Postives = 367/674 (54.45%), Query Frame = 0


Query: 44  SSLKNFASHGQLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHG 103
           S ++++  +G  +K    F L+   +   D++     +   +  +C   SS+  G+  H 
Sbjct: 97  SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156

Query: 104 RIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEA 163
             + +G   +  +   LV  YS  + L++A  + +  +++    WN +I SY K    + 
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216

Query: 164 AILAYKQMLTK-GVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALI 223
           A+  + +M  + G RPDN T  ++L  C        G ++H          ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276

Query: 224 SMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIV 283
            MY +CG +D A  +F NM  +D VSWN+M++ Y+  G +++A  LF+ MQ + +++++V
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336

Query: 284 TWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFT 343
           TW+    G  + G     L +  QM + G+  + V +I  L  C+ +GA+  GKEIH + 
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396

Query: 344 IRH-------CYHRLSTVQNALVTMYARCKDIMHAYILF--RLNDDKSIITWNSMLSGLT 403
           I++        +   + V N L+ MYA+CK +  A  +F      ++ ++TW  M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456

Query: 404 HLDRVEDALHLFRELLLFGVE--PNYVTFASILPLCARVADLQHGREFHCYITKREDFRD 463
                  AL L  E+     +  PN  T +  L  CA +A L+ G++ H Y  + +    
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516

Query: 464 YLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMK 523
            L + N L+DMYA+ G + +A+ VFD++  K+EVT+TSL+ GYGM G G +AL +F+EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576

Query: 524 MFQIKPDHITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLL 583
               K D +T++ VL ACSHSG++ QG   F  M++V G+SP  EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636

Query: 584 NRAKGIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMY 643
           N A  +I  MP  P   +W   +  C IHG  ++GE+AAEK+ E+   H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696

Query: 644 AVAGSWSKLAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALE-SKLLLDSL 703
           A AG W  + +IR+LMR  GV K PGCSWV+   G  +F VGD ++P A E  ++LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756

Query: 704 NDVMKHGNLVTTDY 705
             +   G +  T +
Sbjct: 757 QRIKDIGYVPETGF 765

[Close]

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.7e-113
Identity = 212/614 (34.53%), Postives = 346/614 (56.35%), Query Frame = 0


Query: 91  NCSSLPSGKQLHGRIISSGLEQDSVLVPKLVTF---YSSFKLLAEAHSLVENSNLFHPCP 150
           NC +L S + +H ++I  GL   +  + KL+ F      F+ L  A S+ +     +   
Sbjct: 42  NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101

Query: 151 WNLLITSYVKNELHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHKSIN 210
           WN +   +  +    +A+  Y  M++ G+ P+++TFP +LK+C +++    G ++H  + 
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 211 AWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFE 270
                  L+V  +LISMY + G ++ A  +FD    RD VS+ ++I  YAS+G  + A +
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 271 LFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACS 330
           LFD +  K    ++V+WN +  G    GN+   L+L   M    V  D   M+  + AC+
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 281

Query: 331 HIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNS 390
             G+I LG+++H +   H +     + NAL+ +Y++C ++  A  LF     K +I+WN+
Sbjct: 282 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 341

Query: 391 MLSGLTHLDRVEDALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKR- 450
           ++ G TH++  ++AL LF+E+L  G  PN VT  SILP CA +  +  GR  H YI KR 
Sbjct: 342 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 401

Query: 451 EDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRL 510
           +   +   L  +L+DMYA+ G +  A +VF+S+  K   ++ ++I G+ M G    +  L
Sbjct: 402 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 461

Query: 511 FEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYG 570
           F  M+   I+PD IT V +LSACSHSG+L  G H+F  M   + ++P LEHY CM DL G
Sbjct: 462 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 521

Query: 571 RVGLLNRAKGIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVL 630
             GL   A+ +I  M   P   +W +L+ AC +HGN ++GE  AE L+++ PE+ G YVL
Sbjct: 522 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 581

Query: 631 IANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLL 690
           ++N+YA AG W+++AK R L+ D G+ K PGCS ++I S    F++GD  +P+  E   +
Sbjct: 582 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 641

Query: 691 LDSLNDVMKHGNLV 701
           L+ +  +++    V
Sbjct: 642 LEEMEVLLEKAGFV 651

[Close]

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-102
Identity = 206/643 (32.04%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 85  LLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFH 144
           L+ + + C SL  G+Q+  ++     +++      +VT  +    L EA SL  +     
Sbjct: 61  LIDAYSKCGSLEDGRQVFDKM----PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERD 120

Query: 145 PCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHK 204
            C WN +++ + +++  E A+  +  M  +G   + ++F S+L AC    ++  G++VH 
Sbjct: 121 QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS 180

Query: 205 SINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKE 264
            I        +++ +AL+ MY +CG V+ A+ +FD M DR+ VSWNS+I+C+   G   E
Sbjct: 181 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVE 240

Query: 265 AFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLG 324
           A ++F  M    VE                                    D V +   + 
Sbjct: 241 ALDVFQMMLESRVE-----------------------------------PDEVTLASVIS 300

Query: 325 ACSHIGAIRLGKEIHGFTIRHCYHRLSTV-QNALVTMYARCKDIMH-------------- 384
           AC+ + AI++G+E+HG  +++   R   +  NA V MYA+C  I                
Sbjct: 301 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 360

Query: 385 -----------------AYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFG 444
                            A ++F    ++++++WN++++G T     E+AL LF  L    
Sbjct: 361 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 420

Query: 445 VEPNYVTFASILPLCARVADLQHGREFHCYITK-----REDFRDYLLLWNALVDMYARSG 504
           V P + +FA+IL  CA +A+L  G + H ++ K     +    D + + N+L+DMY + G
Sbjct: 421 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 480

Query: 505 KVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLS 564
            V E   VF  + ++D V++ ++I G+   G G++AL LF EM     KPDHITM+ VLS
Sbjct: 481 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 540

Query: 565 ACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTS 624
           AC H+G +++G H F+ M    G++P  +HY CM DL GR G L  AK +I  MP +P S
Sbjct: 541 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 600

Query: 625 AMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLM 684
            +W +L+ AC +H N  +G++ AEKLLE+ P +SG YVL++NMYA  G W  +  +R  M
Sbjct: 601 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 660

Query: 685 RDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLLLDSL 691
           R  GV K PGCSW+ I      F+V D S+P+  +   LLD L
Sbjct: 661 RKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664

[Close]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL
Match: A0A6J1I8V4 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472055 PE=4 SV=1)

HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 645/711 (90.72%), Postives = 679/711 (95.50%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TFIPKQWKNVPVSNG EFMI+SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSNGREFMINSIFYSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR  YNDSFDLI+QSISILLVSCT CSSLPSGKQLHGRIISSGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FTR 
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTRA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM AYILFRLNDDKSIITWNSMLSGL+H+DRVEDAL LFRE LLFGVEPNYVTF
Sbjct: 361 YARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFREFLLFGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKV+EAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVIEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSPHLEHYACMADL+GRVGLL+RAK IITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLD LNDVMKHG LV TD Y+IG+D+
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHGTLVMTDDYDIGNDV 711

[Close]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL
Match: A0A6J1CJU8 (pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charantia OX=3673 GN=LOC111012088 PE=4 SV=1)

HSP 1 Score: 1324.3 bits (3426), Expect = 0.0e+00
Identity = 646/710 (90.99%), Postives = 675/710 (95.07%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSSSQYI RGLS+YKLQTFIPKQWKN PVSNGSEFMI  +FSSLK+FA HGQLSKAFE
Sbjct: 1   MSSSSSQYIFRGLSLYKLQTFIPKQWKNKPVSNGSEFMIGPVFSSLKSFACHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSLIQLR  YNDSFDLILQS SILLVSCTN SSLP G+QLHGRII SGLEQDS+LVPKL
Sbjct: 61  AFSLIQLRTGYNDSFDLILQSFSILLVSCTNASSLPPGRQLHGRIILSGLEQDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSN+FHPCPWNLLITSYV+N LHEAAIL YKQML++G+RPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNIFHPCPWNLLITSYVRNGLHEAAILVYKQMLSRGIRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK INAWST+WSLFVQNALISMYGRCGEVDTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKYINAWSTEWSLFVQNALISMYGRCGEVDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD+MQ KC+EINIVTWNIIAGGCLRVGNF   
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDNMQSKCIEINIVTWNIIAGGCLRVGNFVGA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG HLD VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLS VQNALVTM
Sbjct: 301 LKLLSQMRNFGAHLDYVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSIVQNALVTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM+AYILFRLN DKSIITWNSMLSG THLDRVE+AL LFRELLL GVEPNYVT 
Sbjct: 361 YARCKDIMNAYILFRLNSDKSIITWNSMLSGYTHLDRVEEALFLFRELLLSGVEPNYVTI 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKRED  DYLLLWNALVDMYARSGKVLEAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKREDLGDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEGSKALRLF+EMK FQIKPDHITMVAVLSACSHSGLLKQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFQEMKRFQIKPDHITMVAVLSACSHSGLLKQGEL 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSPHLEHYACMADL+GRVGLLN+AKGIITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPHLEHYACMADLFGRVGLLNKAKGIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
           GNT+IGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRDSGVAKAPGCSW
Sbjct: 601 GNTNIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDD 711
           VD+GSGFVSFLVGDTSNPQALE+ LLLD+LN+VMKHG+LVT D ++I +D
Sbjct: 661 VDVGSGFVSFLVGDTSNPQALEANLLLDNLNNVMKHGSLVTKDSHDIDND 710

[Close]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL
Match: A0A6J1EI84 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432795 PE=4 SV=1)

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 644/711 (90.58%), Postives = 676/711 (95.08%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TFIPKQWKNVPVSNG EFMI SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSNGREFMITSIFDSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR  YNDSFDLI+QSISILLVSCT CSSLPSGKQLHGRIISSGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYAS GMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FT+ 
Sbjct: 241 MLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM AYILFRLNDDKSIITWNSMLSGL+H+DRVEDAL LFRELLL+GVEPNYVTF
Sbjct: 361 YARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLYGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHYACMADL+GRVGLL+RAK IITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLD LNDVMKHG LV  D Y+IGDDI
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMIDDYDIGDDI 711

[Close]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL
Match: A0A1S3CB12 (pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN=LOC103498667 PE=4 SV=1)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 615/711 (86.50%), Postives = 655/711 (92.12%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MS S S+ IL+GLSI KL+TFIPK WK +PVSN SEFMI SIFSSLK+FASHGQLSK FE
Sbjct: 1   MSLSPSRCILKGLSIDKLETFIPKTWKKLPVSNSSEFMIGSIFSSLKDFASHGQLSKTFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSLIQLR  YNDSFDLILQSISILLVSCT CSSLP GKQLHG IISSGL +DS LV KL
Sbjct: 61  AFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPPGKQLHGHIISSGLVEDSFLVSKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           V FYSS + L EAH+LVE SNLF PC WN+L+TSYV+N+L+EAAILAYKQML+KGVRPDN
Sbjct: 121 VMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVRNKLYEAAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNL FGLEVHKSINA ST WSLFV NALISMYGRCGEVDTAR LFD 
Sbjct: 181 FTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFVHNALISMYGRCGEVDTARYLFDI 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           ML+RD VSWNSMISCY+S+GMW+EAFELF+SMQ K +EIN+VTWNIIAGGCLRVGNFTR 
Sbjct: 241 MLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSLEINVVTWNIIAGGCLRVGNFTRA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           L LLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRH +H LSTVQNALVTM
Sbjct: 301 LNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDI HAY+LFRLNDDKSIITWNSMLSGLTHLDRVEDAL LFRELLLFGVEPNYVTF
Sbjct: 361 YARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDRVEDALCLFRELLLFGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWNALVDMYARSGKV EAKRVFDSLS
Sbjct: 421 ASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWNALVDMYARSGKVSEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK FQIKPDHITMVAVLSACSHSGLL QGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKPDHITMVAVLSACSHSGLLNQGEL 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHY+CMADL+GRVGLLN+AK IITRMPYRPTSA+WATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
           GNTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLA+IRT MRDSGVAK PGCSW
Sbjct: 601 GNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAEIRTRMRDSGVAKVPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           VD+GS FVSF VGDTS+PQALESKLLLDSL DV+KH +L+TTD Y+ GD+I
Sbjct: 661 VDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHDSLITTDNYDTGDNI 711

[Close]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL
Match: A0A5D3BN10 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00830 PE=4 SV=1)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 615/711 (86.50%), Postives = 655/711 (92.12%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MS S S+ IL+GLSI KL+TFIPK WK +PVSN SEFMI SIFSSLK+FASHGQLSK FE
Sbjct: 1   MSLSPSRCILKGLSIDKLETFIPKTWKKLPVSNSSEFMIGSIFSSLKDFASHGQLSKTFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSLIQLR  YNDSFDLILQSISILLVSCT CSSLP GKQLHG IISSGL +DS LV KL
Sbjct: 61  AFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPPGKQLHGHIISSGLVEDSFLVSKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           V FYSS + L EAH+LVE SNLF PC WN+L+TSYV+N+L+EAAILAYKQML+KGVRPDN
Sbjct: 121 VMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVRNKLYEAAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNL FGLEVHKSINA ST WSLFV NALISMYGRCGEVDTAR LFD 
Sbjct: 181 FTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFVHNALISMYGRCGEVDTARYLFDI 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           ML+RD VSWNSMISCY+S+GMW+EAFELF+SMQ K +EIN+VTWNIIAGGCLRVGNFTR 
Sbjct: 241 MLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSLEINVVTWNIIAGGCLRVGNFTRA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           L LLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRH +H LSTVQNALVTM
Sbjct: 301 LNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDI HAY+LFRLNDDKSIITWNSMLSGLTHLDRVEDAL LFRELLLFGVEPNYVTF
Sbjct: 361 YARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDRVEDALCLFRELLLFGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWNALVDMYARSGKV EAKRVFDSLS
Sbjct: 421 ASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWNALVDMYARSGKVSEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK FQIKPDHITMVAVLSACSHSGLL QGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKPDHITMVAVLSACSHSGLLNQGEL 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHY+CMADL+GRVGLLN+AK IITRMPYRPTSA+WATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
           GNTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLA+IRT MRDSGVAK PGCSW
Sbjct: 601 GNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAEIRTRMRDSGVAKVPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           VD+GS FVSF VGDTS+PQALESKLLLDSL DV+KH +L+TTD Y+ GD+I
Sbjct: 661 VDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHDSLITTDNYDTGDNI 711

[Close]

BLAST of Lcy12g002220 vs. NCBI nr
Match: XP_022973516.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973518.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973519.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 645/711 (90.72%), Postives = 679/711 (95.50%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TFIPKQWKNVPVSNG EFMI+SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSNGREFMINSIFYSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR  YNDSFDLI+QSISILLVSCT CSSLPSGKQLHGRIISSGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FTR 
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTRA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM AYILFRLNDDKSIITWNSMLSGL+H+DRVEDAL LFRE LLFGVEPNYVTF
Sbjct: 361 YARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFREFLLFGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKV+EAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVIEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSPHLEHYACMADL+GRVGLL+RAK IITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLD LNDVMKHG LV TD Y+IG+D+
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHGTLVMTDDYDIGNDV 711

[Close]

BLAST of Lcy12g002220 vs. NCBI nr
Match: KAG7025166.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 645/711 (90.72%), Postives = 677/711 (95.22%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TFIPKQWKNVPVSNG EFMI SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSNGREFMITSIFDSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR+ YNDSFDLI+QSISILLVSCT CSSLPSGKQLHGRII SGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRSSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIILSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FTR 
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTRA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDI  AYILFR+NDDKSIITWNSMLSGL+H+DRVEDAL LFRELLLFGVEPNYVTF
Sbjct: 361 YARCKDITRAYILFRINDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLFGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHYACMADL+GRVGLL+RAK IITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLD LNDVMKHG LV TD Y+IGDDI
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMTDDYDIGDDI 711

[Close]

BLAST of Lcy12g002220 vs. NCBI nr
Match: XP_022141804.1 (pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia] >XP_022141805.1 pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia])

HSP 1 Score: 1324.3 bits (3426), Expect = 0.0e+00
Identity = 646/710 (90.99%), Postives = 675/710 (95.07%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSSSQYI RGLS+YKLQTFIPKQWKN PVSNGSEFMI  +FSSLK+FA HGQLSKAFE
Sbjct: 1   MSSSSSQYIFRGLSLYKLQTFIPKQWKNKPVSNGSEFMIGPVFSSLKSFACHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSLIQLR  YNDSFDLILQS SILLVSCTN SSLP G+QLHGRII SGLEQDS+LVPKL
Sbjct: 61  AFSLIQLRTGYNDSFDLILQSFSILLVSCTNASSLPPGRQLHGRIILSGLEQDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSN+FHPCPWNLLITSYV+N LHEAAIL YKQML++G+RPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNIFHPCPWNLLITSYVRNGLHEAAILVYKQMLSRGIRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK INAWST+WSLFVQNALISMYGRCGEVDTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKYINAWSTEWSLFVQNALISMYGRCGEVDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD+MQ KC+EINIVTWNIIAGGCLRVGNF   
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDNMQSKCIEINIVTWNIIAGGCLRVGNFVGA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG HLD VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLS VQNALVTM
Sbjct: 301 LKLLSQMRNFGAHLDYVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSIVQNALVTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM+AYILFRLN DKSIITWNSMLSG THLDRVE+AL LFRELLL GVEPNYVT 
Sbjct: 361 YARCKDIMNAYILFRLNSDKSIITWNSMLSGYTHLDRVEEALFLFRELLLSGVEPNYVTI 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKRED  DYLLLWNALVDMYARSGKVLEAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKREDLGDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEGSKALRLF+EMK FQIKPDHITMVAVLSACSHSGLLKQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFQEMKRFQIKPDHITMVAVLSACSHSGLLKQGEL 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSPHLEHYACMADL+GRVGLLN+AKGIITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPHLEHYACMADLFGRVGLLNKAKGIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
           GNT+IGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRDSGVAKAPGCSW
Sbjct: 601 GNTNIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDD 711
           VD+GSGFVSFLVGDTSNPQALE+ LLLD+LN+VMKHG+LVT D ++I +D
Sbjct: 661 VDVGSGFVSFLVGDTSNPQALEANLLLDNLNNVMKHGSLVTKDSHDIDND 710

[Close]

BLAST of Lcy12g002220 vs. NCBI nr
Match: XP_022925519.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925521.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925522.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 644/711 (90.58%), Postives = 676/711 (95.08%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TFIPKQWKNVPVSNG EFMI SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSNGREFMITSIFDSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR  YNDSFDLI+QSISILLVSCT CSSLPSGKQLHGRIISSGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYAS GMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FT+ 
Sbjct: 241 MLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDIM AYILFRLNDDKSIITWNSMLSGL+H+DRVEDAL LFRELLL+GVEPNYVTF
Sbjct: 361 YARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLYGVEPNYVTF 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHYACMADL+GRVGLL+RAK IITRMPYRPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLD LNDVMKHG LV  D Y+IGDDI
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMIDDYDIGDDI 711

[Close]

BLAST of Lcy12g002220 vs. NCBI nr
Match: XP_023535485.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535486.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535487.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.1 bits (3402), Expect = 0.0e+00
Identity = 642/711 (90.30%), Postives = 675/711 (94.94%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVPVSNGSEFMIDSIFSSLKNFASHGQLSKAFE 60
           MSSSS +YILRGLSIYKL TF+PKQWKNV VSNG EFMI+SIF SLK+FASHGQLSKAFE
Sbjct: 1   MSSSSPEYILRGLSIYKLLTFLPKQWKNVHVSNGREFMINSIFDSLKSFASHGQLSKAFE 60

Query: 61  AFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQDSVLVPKL 120
           AFSL+QLR  YNDSFDLI+QSISILLVSCT CSSLPSGKQLHG IISSGLE+DS+LVPKL
Sbjct: 61  AFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGCIISSGLEEDSILVPKL 120

Query: 121 VTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLTKGVRPDN 180
           VTFYSSFKLLAEAH+LVENSNLFHPCPWNLLITSYV+NELHE+AILAYKQML+KGVRPDN
Sbjct: 121 VTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPDN 180

Query: 181 FTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDN 240
           FTFPSILKACGETQNLGFGLEVHK IN+WS +WSLFVQNALISMYGRCGE+DTARNLFDN
Sbjct: 181 FTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFDN 240

Query: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRT 300
           MLDRDAVSWNSMISCYASKGMWKEAFELFD MQ KC+EINIVTWNIIAGGCLR+G FT+ 
Sbjct: 241 MLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQA 300

Query: 301 LKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTM 360
           LKLLSQMRNFG+HLD+VAMIIGLGACSHIGAIRLGKEIHGFTIRHCYH+ STVQNAL+TM
Sbjct: 301 LKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLTM 360

Query: 361 YARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLFGVEPNYVTF 420
           YARCKDI  AYILFRLNDDKSIITWNSMLSGL+H+DRVEDAL LFRELLLFGVEPNYVT 
Sbjct: 361 YARCKDITRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLFGVEPNYVTC 420

Query: 421 ASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLS 480
           ASILPLCARVADLQHGREFHCYITKR+DFRDYLLLWNALVDMYARSGKV+EAKRVFDSLS
Sbjct: 421 ASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNALVDMYARSGKVIEAKRVFDSLS 480

Query: 481 KKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEH 540
           KKDEVTYTSLIAGYGMQGEG KALRLFEEMK   IKPDHITMVAVLSACSHSGL+KQGE 
Sbjct: 481 KKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGEV 540

Query: 541 LFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWATLIGACCIH 600
           LFAEMQSVHGLSP LEHYACMADL+GRVGLL+RAK IITRMP RPTSAMWATLIGACCIH
Sbjct: 541 LFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPCRPTSAMWATLIGACCIH 600

Query: 601 GNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSW 660
            NTDIGEWAAEKLLEM+PEHSGYYVLIANMYA AGSWSKLAKIRTLMRD GVAKAPGCSW
Sbjct: 601 RNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCSW 660

Query: 661 VDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMKHGNLVTTDYYNIGDDI 712
           V++GS FVSFLVGDTSNPQALESK LLDSLNDVMKHG LV TD Y+IGDDI
Sbjct: 661 VEVGSEFVSFLVGDTSNPQALESKHLLDSLNDVMKHGTLVMTDDYDIGDDI 711

[Close]

BLAST of Lcy12g002220 vs. TAIR 10
Match: AT1G71490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 827.8 bits (2137), Expect = 6.7e-240
Identity = 395/656 (60.21%), Postives = 502/656 (76.52%), Query Frame = 0


Query: 40  DSIFSSLKNFASHGQLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGK 99
           +S+F SL + ASHG L  AF+ FSL++L++    S DL+L S + LL +C +  +  +G 
Sbjct: 4   ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63

Query: 100 QLHGRIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNE 159
           Q+H   ISSG+E  SVLVPKLVTFYS+F L  EA S++ENS++ HP PWN+LI SY KNE
Sbjct: 64  QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123

Query: 160 LHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQN 219
           L E  I AYK+M++KG+RPD FT+PS+LKACGET ++ FG  VH SI   S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183

Query: 220 ALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEI 279
           ALISMY R   +  AR LFD M +RDAVSWN++I+CYAS+GMW EAFELFD M    VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243

Query: 280 NIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIH 339
           +++TWNII+GGCL+ GN+   L L+S+MRNF   LD VAMIIGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303

Query: 340 GFTIRHCYHRLSTVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVE 399
           G  I   Y  +  V+N L+TMY++CKD+ HA I+FR  ++ S+ TWNS++SG   L++ E
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363

Query: 400 DALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNAL 459
           +A HL RE+L+ G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423

Query: 460 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDH 519
           VD+YA+SGK++ AK+V D +SK+DEVTYTSLI GYG QGEG  AL LF+EM    IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483

Query: 520 ITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIIT 579
           +T+VAVLSACSHS L+ +GE LF +MQ  +G+ P L+H++CM DLYGR G L +AK II 
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543

Query: 580 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAVAGSWSK 639
            MPY+P+ A WATL+ AC IHGNT IG+WAAEKLLEM+PE+ GYYVLIANMYA AGSWSK
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603

Query: 640 LAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLLLDSLNDVMK 696
           LA++RT+MRD GV K PGC+W+D  SGF  F VGDTS+P+A  +  LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659

[Close]

BLAST of Lcy12g002220 vs. TAIR 10
Match: AT1G22830.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 707.2 bits (1824), Expect = 1.3e-203
Identity = 347/665 (52.18%), Postives = 471/665 (70.83%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVP-------VSNGSEFMIDSIFSSLKNFASHG 60
           M SS S+ ILRGL++ ++  FIP+ WK +P        ++  E +   +F+S ++  SHG
Sbjct: 1   MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60

Query: 61  QLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQD 120
           QL +AF  FSL++ +   + S + +L S + LL +C   +    G+QLH   ISSGLE D
Sbjct: 61  QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120

Query: 121 SVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLT 180
           SVLVPKLVTFYS+F LL EA ++ ENS + HP PWN+LI SY++N+  + ++  YK+M++
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180

Query: 181 KGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDT 240
           KG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NALISMY R G+VD 
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240

Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLR 300
           AR LFD M +RDAVSWN++I+CY S+    EAF+L D M    VE +IVTWN IAGGCL 
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300

Query: 301 VGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHC--YHRLS 360
            GN+   L  +  MRN  V + +VAMI GL ACSHIGA++ GK  H   IR C   H + 
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360

Query: 361 TVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLF 420
            V+N+L+TMY+RC D+ HA+I+F+  +  S+ TWNS++SG  + +R E+   L +E+LL 
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420

Query: 421 GVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
           G  PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++ 
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480

Query: 481 AKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSH 540
           AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  F++M    IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540

Query: 541 SGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWA 600
           S L+++G  LF +M+ V G+   LEHY+CM DLY R G L++A+ I   +PY P+SAM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600

Query: 601 TLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDS 656
           TL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYAV GSWSKL  ++TL+ D 
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660

[Close]

BLAST of Lcy12g002220 vs. TAIR 10
Match: AT1G22830.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 707.2 bits (1824), Expect = 1.3e-203
Identity = 347/665 (52.18%), Postives = 471/665 (70.83%), Query Frame = 0


Query: 1   MSSSSSQYILRGLSIYKLQTFIPKQWKNVP-------VSNGSEFMIDSIFSSLKNFASHG 60
           M SS S+ ILRGL++ ++  FIP+ WK +P        ++  E +   +F+S ++  SHG
Sbjct: 1   MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60

Query: 61  QLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGRIISSGLEQD 120
           QL +AF  FSL++ +   + S + +L S + LL +C   +    G+QLH   ISSGLE D
Sbjct: 61  QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120

Query: 121 SVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEAAILAYKQMLT 180
           SVLVPKLVTFYS+F LL EA ++ ENS + HP PWN+LI SY++N+  + ++  YK+M++
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180

Query: 181 KGVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDT 240
           KG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NALISMY R G+VD 
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240

Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIVTWNIIAGGCLR 300
           AR LFD M +RDAVSWN++I+CY S+    EAF+L D M    VE +IVTWN IAGGCL 
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300

Query: 301 VGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFTIRHC--YHRLS 360
            GN+   L  +  MRN  V + +VAMI GL ACSHIGA++ GK  H   IR C   H + 
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360

Query: 361 TVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNSMLSGLTHLDRVEDALHLFRELLLF 420
            V+N+L+TMY+RC D+ HA+I+F+  +  S+ TWNS++SG  + +R E+   L +E+LL 
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420

Query: 421 GVEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
           G  PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++ 
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480

Query: 481 AKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMKMFQIKPDHITMVAVLSACSH 540
           AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  F++M    IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540

Query: 541 SGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLLNRAKGIITRMPYRPTSAMWA 600
           S L+++G  LF +M+ V G+   LEHY+CM DLY R G L++A+ I   +PY P+SAM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600

Query: 601 TLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAVAGSWSKLAKIRTLMRDS 656
           TL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYAV GSWSKL  ++TL+ D 
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660

[Close]

BLAST of Lcy12g002220 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 427.9 bits (1099), Expect = 1.5e-119
Identity = 227/674 (33.68%), Postives = 367/674 (54.45%), Query Frame = 0


Query: 44  SSLKNFASHGQLSKAFEAFSLIQLRACYNDSFDLILQSISILLVSCTNCSSLPSGKQLHG 103
           S ++++  +G  +K    F L+   +   D++     +   +  +C   SS+  G+  H 
Sbjct: 97  SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156

Query: 104 RIISSGLEQDSVLVPKLVTFYSSFKLLAEAHSLVENSNLFHPCPWNLLITSYVKNELHEA 163
             + +G   +  +   LV  YS  + L++A  + +  +++    WN +I SY K    + 
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216

Query: 164 AILAYKQMLTK-GVRPDNFTFPSILKACGETQNLGFGLEVHKSINAWSTKWSLFVQNALI 223
           A+  + +M  + G RPDN T  ++L  C        G ++H          ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276

Query: 224 SMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDSMQRKCVEINIV 283
            MY +CG +D A  +F NM  +D VSWN+M++ Y+  G +++A  LF+ MQ + +++++V
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336

Query: 284 TWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACSHIGAIRLGKEIHGFT 343
           TW+    G  + G     L +  QM + G+  + V +I  L  C+ +GA+  GKEIH + 
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396

Query: 344 IRH-------CYHRLSTVQNALVTMYARCKDIMHAYILF--RLNDDKSIITWNSMLSGLT 403
           I++        +   + V N L+ MYA+CK +  A  +F      ++ ++TW  M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456

Query: 404 HLDRVEDALHLFRELLLFGVE--PNYVTFASILPLCARVADLQHGREFHCYITKREDFRD 463
                  AL L  E+     +  PN  T +  L  CA +A L+ G++ H Y  + +    
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516

Query: 464 YLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFEEMK 523
            L + N L+DMYA+ G + +A+ VFD++  K+EVT+TSL+ GYGM G G +AL +F+EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576

Query: 524 MFQIKPDHITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYGRVGLL 583
               K D +T++ VL ACSHSG++ QG   F  M++V G+SP  EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636

Query: 584 NRAKGIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMY 643
           N A  +I  MP  P   +W   +  C IHG  ++GE+AAEK+ E+   H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696

Query: 644 AVAGSWSKLAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALE-SKLLLDSL 703
           A AG W  + +IR+LMR  GV K PGCSWV+   G  +F VGD ++P A E  ++LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756

Query: 704 NDVMKHGNLVTTDY 705
             +   G +  T +
Sbjct: 757 QRIKDIGYVPETGF 765

[Close]

BLAST of Lcy12g002220 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 410.2 bits (1053), Expect = 3.3e-114
Identity = 212/614 (34.53%), Postives = 346/614 (56.35%), Query Frame = 0


Query: 91  NCSSLPSGKQLHGRIISSGLEQDSVLVPKLVTF---YSSFKLLAEAHSLVENSNLFHPCP 150
           NC +L S + +H ++I  GL   +  + KL+ F      F+ L  A S+ +     +   
Sbjct: 42  NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101

Query: 151 WNLLITSYVKNELHEAAILAYKQMLTKGVRPDNFTFPSILKACGETQNLGFGLEVHKSIN 210
           WN +   +  +    +A+  Y  M++ G+ P+++TFP +LK+C +++    G ++H  + 
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 211 AWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFE 270
                  L+V  +LISMY + G ++ A  +FD    RD VS+ ++I  YAS+G  + A +
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 271 LFDSMQRKCVEINIVTWNIIAGGCLRVGNFTRTLKLLSQMRNFGVHLDNVAMIIGLGACS 330
           LFD +  K    ++V+WN +  G    GN+   L+L   M    V  D   M+  + AC+
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 281

Query: 331 HIGAIRLGKEIHGFTIRHCYHRLSTVQNALVTMYARCKDIMHAYILFRLNDDKSIITWNS 390
             G+I LG+++H +   H +     + NAL+ +Y++C ++  A  LF     K +I+WN+
Sbjct: 282 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 341

Query: 391 MLSGLTHLDRVEDALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKR- 450
           ++ G TH++  ++AL LF+E+L  G  PN VT  SILP CA +  +  GR  H YI KR 
Sbjct: 342 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 401

Query: 451 EDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRL 510
           +   +   L  +L+DMYA+ G +  A +VF+S+  K   ++ ++I G+ M G    +  L
Sbjct: 402 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 461

Query: 511 FEEMKMFQIKPDHITMVAVLSACSHSGLLKQGEHLFAEMQSVHGLSPHLEHYACMADLYG 570
           F  M+   I+PD IT V +LSACSHSG+L  G H+F  M   + ++P LEHY CM DL G
Sbjct: 462 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 521

Query: 571 RVGLLNRAKGIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVL 630
             GL   A+ +I  M   P   +W +L+ AC +HGN ++GE  AE L+++ PE+ G YVL
Sbjct: 522 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 581

Query: 631 IANMYAVAGSWSKLAKIRTLMRDSGVAKAPGCSWVDIGSGFVSFLVGDTSNPQALESKLL 690
           ++N+YA AG W+++AK R L+ D G+ K PGCS ++I S    F++GD  +P+  E   +
Sbjct: 582 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 641

Query: 691 LDSLNDVMKHGNLV 701
           L+ +  +++    V
Sbjct: 642 LEEMEVLLEKAGFV 651

The following BLAST results are available for this feature:

BLAST of Lcy12g002220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9I6	9.4e-239	60.21	Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX...	[more]
Q4V389	1.9e-202	52.18	Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX...	[more]
Q9LFL5	2.2e-118	33.68	Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	4.7e-113	34.53	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SIT7	6.4e-102	32.04	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy12g002220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8V4	0.0e+00	90.72	pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1CJU8	0.0e+00	90.99	pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charanti...	[more]
A0A6J1EI84	0.0e+00	90.58	pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita mo...	[more]
A0A1S3CB12	0.0e+00	86.50	pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3BN10	0.0e+00	86.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy12g002220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973516.1	0.0e+00	90.72	pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxi...	[more]
KAG7025166.1	0.0e+00	90.72	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022141804.1	0.0e+00	90.99	pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia]...	[more]
XP_022925519.1	0.0e+00	90.58	pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita mosc...	[more]
XP_023535485.1	0.0e+00	90.30	pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo...	[more]

BLAST of Lcy12g002220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71490.1	6.7e-240	60.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22830.1	1.3e-203	52.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22830.2	1.3e-203	52.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G16860.1	1.5e-119	33.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	3.3e-114	34.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 381..426 e-value: 8.0E-8 score: 32.4 coord: 148..190 e-value: 4.1E-8 score: 33.3 coord: 482..530 e-value: 1.7E-10 score: 41.0 coord: 245..291 e-value: 4.5E-13 score: 49.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 217..245 e-value: 1.6E-4 score: 19.7 coord: 383..416 e-value: 7.7E-7 score: 26.9 coord: 456..482 e-value: 5.9E-4 score: 17.8 coord: 148..179 e-value: 3.5E-5 score: 21.7 coord: 485..518 e-value: 5.9E-8 score: 30.4 coord: 247..280 e-value: 1.3E-9 score: 35.6 coord: 282..315 e-value: 2.0E-4 score: 19.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 219..244 e-value: 7.9E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..178 score: 9.481582
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..279 score: 12.561707
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..244 score: 8.900633
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 280..314 score: 9.97484
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 483..517 score: 11.99172
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..415 score: 11.498462
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 434..672 e-value: 9.7E-38 score: 132.3 coord: 41..197 e-value: 8.6E-15 score: 56.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 339..433 e-value: 2.1E-14 score: 55.3 coord: 200..338 e-value: 1.2E-30 score: 108.2
None	No IPR available	PANTHER	PTHR47924:SF43	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 27..700
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 27..700

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g002220.1	Lcy12g002220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding