Lcy12g002080 (gene) Sponge gourd (P93075) v1

Overview
NameLcy12g002080
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUlp1-like peptidase
LocationChr12: 5534704 .. 5535276 (+)
RNA-Seq ExpressionLcy12g002080
SyntenyLcy12g002080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGTACCTAAATTCTCCCGGAAGGATTACTTTCCAGCAGCCTTAACTTGTTGTTCCCACCTAAATAACACTGTAAGAAAGATAAAGGCAAAACTGACCACTACCCAATTGGACATGTTTAGGCAAACCGTTTTTGGACCCCTGTTAGATACCTCTATTATTTTTAATGGTCAACTTGTTCATTACATTCTGCTTAGGGAAGTTGACGAGACTAGGGAAGATGTAATTAGTTTTGAGCTGTTGGGAAAGAAGATTTCATTTGGTCAGAGGGAGTTTGACCTTATCACCGGTCTTAGACATGCAATTGCACCGGTTAGGAGACACTCAGCGGGTAATAGGCTTAGAGAAACCTATTTGGATAATAGCATAACTATGAGATGTGGGAAGTTAGATAGTTTATACCCTAGATTAGAATTTCAAGCTGAGGAGGATGGAGTGAAGATGTCTATATTTTCCTTTATTGAGCTTGTGATGATGGGGAGGGAGAAGAAACAGTTAACTGACACATCCCTATTGAATGTAATCGACGATTGGATTGCCTTCTATAACGAGGATGGAGCACCATAA

mRNA sequence

ATGGAAATTGTACCTAAATTCTCCCGGAAGGATTACTTTCCAGCAGCCTTAACTTGTTGTTCCCACCTAAATAACACTGTAAGAAAGATAAAGGCAAAACTGACCACTACCCAATTGGACATGTTTAGGCAAACCGTTTTTGGACCCCTGTTAGATACCTCTATTATTTTTAATGGTCAACTTGTTCATTACATTCTGCTTAGGGAAGTTGACGAGACTAGGGAAGATGTAATTAGTTTTGAGCTGTTGGGAAAGAAGATTTCATTTGGTCAGAGGGAGTTTGACCTTATCACCGGTCTTAGACATGCAATTGCACCGGTTAGGAGACACTCAGCGGGTAATAGGCTTAGAGAAACCTATTTGGATAATAGCATAACTATGAGATGTGGGAAGTTAGATAGTTTATACCCTAGATTAGAATTTCAAGCTGAGGAGGATGGAGTGAAGATGTCTATATTTTCCTTTATTGAGCTTGTGATGATGGGGAGGGAGAAGAAACAGTTAACTGACACATCCCTATTGAATGTAATCGACGATTGGATTGCCTTCTATAACGAGGATGGAGCACCATAA

Coding sequence (CDS)

ATGGAAATTGTACCTAAATTCTCCCGGAAGGATTACTTTCCAGCAGCCTTAACTTGTTGTTCCCACCTAAATAACACTGTAAGAAAGATAAAGGCAAAACTGACCACTACCCAATTGGACATGTTTAGGCAAACCGTTTTTGGACCCCTGTTAGATACCTCTATTATTTTTAATGGTCAACTTGTTCATTACATTCTGCTTAGGGAAGTTGACGAGACTAGGGAAGATGTAATTAGTTTTGAGCTGTTGGGAAAGAAGATTTCATTTGGTCAGAGGGAGTTTGACCTTATCACCGGTCTTAGACATGCAATTGCACCGGTTAGGAGACACTCAGCGGGTAATAGGCTTAGAGAAACCTATTTGGATAATAGCATAACTATGAGATGTGGGAAGTTAGATAGTTTATACCCTAGATTAGAATTTCAAGCTGAGGAGGATGGAGTGAAGATGTCTATATTTTCCTTTATTGAGCTTGTGATGATGGGGAGGGAGAAGAAACAGTTAACTGACACATCCCTATTGAATGTAATCGACGATTGGATTGCCTTCTATAACGAGGATGGAGCACCATAA

Protein sequence

MEIVPKFSRKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLREVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMRCGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNEDGAP
Homology
BLAST of Lcy12g002080 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.3e-49
Identity = 96/179 (53.63%), Postives = 129/179 (72.07%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FPA LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LLR
Sbjct: 9   RNDWFPATLTNLAHIDKTSTRIKARLTPTQLDMFRQTCFGPILDIDVVFNGPLIHHLLLR 68

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L GK++SFG+REFDLITGL H +  V  H  G RLR  Y  + + ++
Sbjct: 69  EVEEPRQDVISFDLFGKRVSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDGVRVK 128

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 188
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT+LL V+D W  F N D
Sbjct: 129 CSELEKIFLEDVFYDDEDVVKVRIVYFIELAMMGKERKQFIDTALLGVVDRWEVFCNYD 187

BLAST of Lcy12g002080 vs. ExPASy TrEMBL
Match: A0A6J1DWQ3 (uncharacterized protein LOC111023842 OS=Momordica charantia OX=3673 GN=LOC111023842 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48
Identity = 93/172 (54.07%), Postives = 126/172 (73.26%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FP  LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LLR
Sbjct: 13  RNDWFPTTLTNFAHVDKTSTRIKARLTPTQLDMFRQTCFGPILDMDVVFNGPLIHHLLLR 72

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L GK++SFG+REFDLITGL H +  V  H  G RLR  Y  +S+ ++
Sbjct: 73  EVEEPRQDVISFDLFGKRVSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDSVKVK 132

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDW 181
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT+LL V+D W
Sbjct: 133 CSELEKIFLEDVFYDDEDVVKVGIVYFIELAMMGKERKQFIDTALLGVVDRW 184

BLAST of Lcy12g002080 vs. ExPASy TrEMBL
Match: A0A6J1DM82 (uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022300 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.7e-47
Identity = 88/180 (48.89%), Postives = 126/180 (70.00%), Query Frame = 0

Query: 8   SRKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILL 67
           +R D+FP  LT  +H + T  ++K +LT TQ+DMFRQT FGP+LD  ++FNG L+H++LL
Sbjct: 8   NRDDWFPPTLTNLAHADKTTSRLKGRLTPTQIDMFRQTCFGPILDMDVVFNGPLIHHLLL 67

Query: 68  REVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITM 127
           REV+E R+D+ISF+L GK++SFG+REFDLITGL + +  V     G RLR  Y  +S+ +
Sbjct: 68  REVEEPRQDIISFDLFGKRVSFGKREFDLITGLSYRMIRVDNDIPGRRLRARYFKDSVRV 127

Query: 128 RCGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 187
           +C +L+ ++    F  +ED VK+ I  F+EL MMG+E+KQ  D +LL V+D W  F N D
Sbjct: 128 KCSELEKIFMETVFYDDEDAVKVGIVYFVELAMMGKERKQFIDATLLGVVDRWELFCNHD 187

BLAST of Lcy12g002080 vs. ExPASy TrEMBL
Match: A0A6J1CZE8 (uncharacterized protein LOC111015600 OS=Momordica charantia OX=3673 GN=LOC111015600 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FPA LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LL 
Sbjct: 9   RNDWFPATLTNLAHVDKTTTRIKARLTPTQLDMFRQTCFGPILDMGVVFNGPLIHHLLLI 68

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L  K++SFG+REFDLITGL H +  V  H  G RLR  Y  +S+ ++
Sbjct: 69  EVEEPRQDVISFDLFRKRVSFGKREFDLITGLSHKMNRVNNHIPGRRLRARYFKDSVRVK 128

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 188
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT  + V+D W AF N D
Sbjct: 129 CSELEKIFLEDIFYDDEDVVKVGIVYFIELAMMGKERKQFIDT--VGVVDRWEAFCNSD 185

BLAST of Lcy12g002080 vs. ExPASy TrEMBL
Match: A0A6J1DN46 (uncharacterized protein LOC111022112 OS=Momordica charantia OX=3673 GN=LOC111022112 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 89/187 (47.59%), Postives = 131/187 (70.05%), Query Frame = 0

Query: 1   MEIVPKFSRKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQ 60
           M++  K ++ D+FPAAL+  SH+  T  ++KA+LT +QLDMF QT FGP+L  +++FNG 
Sbjct: 1   MDMTVKINQDDWFPAALSNLSHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGP 60

Query: 61  LVHYILLREVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETY 120
           L+H++LLREV+E R+D+ISF L G  +SFG+REFDLITGLRH +  V       RLR  Y
Sbjct: 61  LLHHLLLREVEEPRDDLISFNLFGNMVSFGKREFDLITGLRHTMNRVDXDVXNRRLRILY 120

Query: 121 LDNSITMRCGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDW 180
             +  +++C +L+ ++    F+ +ED VK++I  +IEL MMG+E+KQ  DTSLL ++D W
Sbjct: 121 FQDXASVKCXELEKIFLEHTFENDEDAVKIAIVYYIELAMMGKERKQKMDTSLLGIVDRW 180

Query: 181 IAFYNED 188
             + N D
Sbjct: 181 EVYCNYD 187

BLAST of Lcy12g002080 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 206.1 bits (523), Expect = 2.7e-49
Identity = 96/179 (53.63%), Postives = 129/179 (72.07%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FPA LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LLR
Sbjct: 9   RNDWFPATLTNLAHIDKTSTRIKARLTPTQLDMFRQTCFGPILDIDVVFNGPLIHHLLLR 68

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L GK++SFG+REFDLITGL H +  V  H  G RLR  Y  + + ++
Sbjct: 69  EVEEPRQDVISFDLFGKRVSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDGVRVK 128

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 188
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT+LL V+D W  F N D
Sbjct: 129 CSELEKIFLEDVFYDDEDVVKVRIVYFIELAMMGKERKQFIDTALLGVVDRWEVFCNYD 187

BLAST of Lcy12g002080 vs. NCBI nr
Match: XP_022157016.1 (uncharacterized protein LOC111023842 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 93/172 (54.07%), Postives = 126/172 (73.26%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FP  LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LLR
Sbjct: 13  RNDWFPTTLTNFAHVDKTSTRIKARLTPTQLDMFRQTCFGPILDMDVVFNGPLIHHLLLR 72

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L GK++SFG+REFDLITGL H +  V  H  G RLR  Y  +S+ ++
Sbjct: 73  EVEEPRQDVISFDLFGKRVSFGKREFDLITGLSHRMNRVDNHIPGRRLRARYFKDSVKVK 132

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDW 181
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT+LL V+D W
Sbjct: 133 CSELEKIFLEDVFYDDEDVVKVGIVYFIELAMMGKERKQFIDTALLGVVDRW 184

BLAST of Lcy12g002080 vs. NCBI nr
Match: XP_022155158.1 (uncharacterized protein LOC111022300 [Momordica charantia])

HSP 1 Score: 197.6 bits (501), Expect = 9.7e-47
Identity = 88/180 (48.89%), Postives = 126/180 (70.00%), Query Frame = 0

Query: 8   SRKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILL 67
           +R D+FP  LT  +H + T  ++K +LT TQ+DMFRQT FGP+LD  ++FNG L+H++LL
Sbjct: 8   NRDDWFPPTLTNLAHADKTTSRLKGRLTPTQIDMFRQTCFGPILDMDVVFNGPLIHHLLL 67

Query: 68  REVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITM 127
           REV+E R+D+ISF+L GK++SFG+REFDLITGL + +  V     G RLR  Y  +S+ +
Sbjct: 68  REVEEPRQDIISFDLFGKRVSFGKREFDLITGLSYRMIRVDNDIPGRRLRARYFKDSVRV 127

Query: 128 RCGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 187
           +C +L+ ++    F  +ED VK+ I  F+EL MMG+E+KQ  D +LL V+D W  F N D
Sbjct: 128 KCSELEKIFMETVFYDDEDAVKVGIVYFVELAMMGKERKQFIDATLLGVVDRWELFCNHD 187

BLAST of Lcy12g002080 vs. NCBI nr
Match: XP_022146372.1 (uncharacterized protein LOC111015600 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-46
Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0

Query: 9   RKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQLVHYILLR 68
           R D+FPA LT  +H++ T  +IKA+LT TQLDMFRQT FGP+LD  ++FNG L+H++LL 
Sbjct: 9   RNDWFPATLTNLAHVDKTTTRIKARLTPTQLDMFRQTCFGPILDMGVVFNGPLIHHLLLI 68

Query: 69  EVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETYLDNSITMR 128
           EV+E R+DVISF+L  K++SFG+REFDLITGL H +  V  H  G RLR  Y  +S+ ++
Sbjct: 69  EVEEPRQDVISFDLFRKRVSFGKREFDLITGLSHKMNRVNNHIPGRRLRARYFKDSVRVK 128

Query: 129 CGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDWIAFYNED 188
           C +L+ ++    F  +ED VK+ I  FIEL MMG+E+KQ  DT  + V+D W AF N D
Sbjct: 129 CSELEKIFLEDIFYDDEDVVKVGIVYFIELAMMGKERKQFIDT--VGVVDRWEAFCNSD 185

BLAST of Lcy12g002080 vs. NCBI nr
Match: XP_022154967.1 (uncharacterized protein LOC111022112 [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-45
Identity = 88/187 (47.06%), Postives = 131/187 (70.05%), Query Frame = 0

Query: 1   MEIVPKFSRKDYFPAALTCCSHLNNTVRKIKAKLTTTQLDMFRQTVFGPLLDTSIIFNGQ 60
           M++  K ++ D+FPAAL+  SH+  T  ++KA+LT +QLDMF QT FGP+L  +++FNG 
Sbjct: 1   MDMTVKINQDDWFPAALSNLSHVGKTSSRLKARLTPSQLDMFSQTCFGPILGMNVVFNGP 60

Query: 61  LVHYILLREVDETREDVISFELLGKKISFGQREFDLITGLRHAIAPVRRHSAGNRLRETY 120
           L+H++LLREV+E R+++ISF L G  +SFG+REFDLITGLRH +  V       RLR  Y
Sbjct: 61  LLHHLLLREVEEPRDBLISFNLFGNMVSFGKREFDLITGLRHTMNRVDXDVXNRRLRILY 120

Query: 121 LDNSITMRCGKLDSLYPRLEFQAEEDGVKMSIFSFIELVMMGREKKQLTDTSLLNVIDDW 180
             +  +++C +L+ ++    F+ +ED VK++I  +IEL MMG+E+KQ  DTSLL ++D W
Sbjct: 121 FQDXASVKCXELEKIFLEHTFENDEDAVKIAIVYYIELAMMGKERKQKMDTSLLGIVDRW 180

Query: 181 IAFYNED 188
             + N D
Sbjct: 181 EVYCNYD 187

BLAST of Lcy12g002080 vs. TAIR 10
Match: AT5G35050.1 (Domain of unknown function (DUF1985) )

HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04
Identity = 25/84 (29.76%), Postives = 41/84 (48.81%), Query Frame = 0

Query: 30  IKAKLTTTQLDMFRQTVFGPLLDTSII-------------FNGQLVHYILLREVDETRED 89
           IK  L+ +       T  GP++   +              F+GQLV ++++R++  +RED
Sbjct: 42  IKEILSNSLFSRLETTFLGPIIKAGLRKAGGNQKGPNGLGFSGQLVRFLVVRQLVSSRED 101

Query: 90  VISFELLGKKISFGQREFDLITGL 101
            I F +  K + F   EF L+TGL
Sbjct: 102 GIWFCINNKPMRFSLTEFHLVTGL 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DJX91.3e-4953.63uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DWQ35.6e-4854.07uncharacterized protein LOC111023842 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DM824.7e-4748.89uncharacterized protein LOC111022300 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1CZE81.1e-4652.51uncharacterized protein LOC111015600 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1DN461.2e-4547.59uncharacterized protein LOC111022112 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
Match NameE-valueIdentityDescription
XP_022153201.12.7e-4953.63uncharacterized protein LOC111020757 [Momordica charantia][more]
XP_022157016.11.2e-4754.07uncharacterized protein LOC111023842 [Momordica charantia][more]
XP_022155158.19.7e-4748.89uncharacterized protein LOC111022300 [Momordica charantia][more]
XP_022146372.12.2e-4652.51uncharacterized protein LOC111015600 [Momordica charantia][more]
XP_022154967.14.1e-4547.06uncharacterized protein LOC111022112 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G35050.18.3e-0429.76Domain of unknown function (DUF1985) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 66..183
e-value: 2.3E-9
score: 37.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy12g002080.1Lcy12g002080.1mRNA